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2024-05-14 19:37:14

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Colwellia psychrerythraea 34H, 34H; BAA-681

Number of genes found: 119

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Colwellia psychrerythraea 34H, 34H; BAA-681
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CPS_4856 putative cation efflux proteinSubName: Full=Putative cation efflux protein; chromosome CDS5147678 1491 + 0.412475
NA CPS_4444 type IV pilinSubName: Full=Type IV pilin; chromosome CDS4681376 483 + 0.401656
NA CPS_1507 putative flagellar hook-length control proteinSubName: Full=Putative flagellar hook-length control protein; chromosome CDS1549536 1983 + 0.386283
NA CPS_0471 type IV pilus biogenesis protein PilQSubName: Full=Type IV pilus biogenesis protein PilQ; chromosome CDS472626 2121 + 0.361622
NA CPS_0363 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS370023 1362 - 0.350954
NA CPS_1844 conserved hypothetical protein TIGR00427SubName: Full=Uncharacterized protein; chromosome CDS1894552 624 - 0.387821
NA CPS_2413 SEC-C motif domain proteinSubName: Full=SEC-C motif domain protein; chromosome CDS2524573 960 + 0.359375
NA CPS_4571 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4824159 489 - 0.353783
NA CPS_1219 putative type IV pilus biogenesis proteinSubName: Full=Putative type IV pilus biogenesis protein; chromosome CDS1252900 543 - 0.39779
NA CPS_3975 MotA/TolQ/ExbB proton channel family proteinSubName: Full=MotA/TolQ/ExbB proton channel family protein; chromosome CDS4168599 1374 - 0.402475
NA CPS_4646 RND efflux system, outer membrane lipoprotein, NodT familySubName: Full=RND efflux system, outer membrane lipoprotein, NodT family; chromosome CDS4906295 1395 + 0.405018
NA CPS_1506 flagellar protein FliJSubName: Full=Flagellar protein FliJ; chromosome CDS1548916 444 + 0.391892
NA CPS_2549 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2653938 459 + 0.359477
NA CPS_5050 inner membrane protein, 60 kDaRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS5370275 1632 - 0.362132
NA CPS_1195 intimin/invasin family proteinSubName: Full=Intimin/invasin family protein; chromosome CDS1223606 2637 + 0.409177
NA CPS_1214 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1246661 969 + 0.413829
NA CPS_0883 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS891860 1362 - 0.350954
NA CPS_1839 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS1889605 1401 + 0.371877
NA CPS_1283 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1321233 1524 - 0.447507
NA CPS_1104 dipeptidyl peptidase IVSubName: Full=Dipeptidyl peptidase IV; EC=3.4.14.5; chromosome CDS1123943 2259 - 0.382027
NA CPS_2386 efflux transporter, RND family, outer membrane lipoprotein subunitSubName: Full=Efflux transporter, RND family, outer membrane lipoprotein subunit; chromosome CDS2499511 1440 - 0.363194
NA CPS_4254 lysM domain proteinSubName: Full=LysM domain protein; chromosome CDS4482947 1575 - 0.382222
NA CPS_1615 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1663434 564 - 0.413121
NA CPS_3508 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS3644473 2139 - 0.355774
NA CPS_1630 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1681193 942 - 0.390658
NA CPS_3919 putative type IV pilus biogenesis proteinSubName: Full=Putative type IV pilus biogenesis protein; chromosome CDS4093604 627 + 0.371611
NA CPS_2575 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2679634 333 + 0.36036
NA CPS_4836 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5127323 459 - 0.372549
NA CPS_2960 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3101732 408 - 0.328431
NA CPS_0790 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS810810 561 - 0.413547
NA CPS_3226 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3354150 2196 - 0.414845
NA CPS_5029 putative general secretion pathway protein ASubName: Full=Putative general secretion pathway protein A; chromosome CDS5345209 1041 + 0.3439
NA CPS_3755 MotA/TolQ/ExbB proton channel familySubName: Full=MotA/TolQ/ExbB proton channel family; chromosome CDS3914136 1350 - 0.367407
NA CPS_2430 VCBS repeat proteinSubName: Full=VCBS repeat protein; chromosome CDS2543584 11277 + 0.418196
NA CPS_0445 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS443799 297 + 0.380471
NA CPS_2304 putative type IV pilus biogenesis protein pilZSubName: Full=Putative type IV pilus biogenesis protein pilZ; chromosome CDS2403397 327 + 0.400612
NA CPS_1957 putative RND efflux system proteinSubName: Full=Putative RND efflux system protein; chromosome CDS2019519 1335 + 0.413483
NA CPS_0444 putative nickel-containing superoxide dismutaseSubName: Full=Putative nickel-containing superoxide dismutase; chromosome CDS443273 504 + 0.367063
NA CPS_4212 putative general secretion pathway protein ASubName: Full=Putative general secretion pathway protein A; chromosome CDS4433359 1692 - 0.379433
NA CPS_0016 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS17757 2940 - 0.401701
NA CPS_2573 amidohydrolase family proteinSubName: Full=Amidohydrolase family protein; chromosome CDS2675852 3216 + 0.408271
NA CPS_4326 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS4553279 1404 - 0.412393
NA CPS_0022 putative DNA processing protein DprASubName: Full=Putative DNA processing protein DprA; chromosome CDS26651 1152 + 0.40191
NA CPS_1751 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1796529 459 + 0.383442
NA CPS_3020 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS3160468 651 - 0.333333
NA CPS_1216 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1248219 3768 + 0.403662
NA CPS_2869 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS3000862 1239 - 0.410815
ccmD CPS_1031 heme exporter protein CcmDSubName: Full=Heme exporter protein CcmD; chromosome CDS1058039 234 - 0.371795
clpP CPS_3785 ATP-dependent Clp protease, proteolytic subunit ClpPRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS3950580 663 - 0.368024
exbB1 CPS_1853 biopolymer transport exbB proteinSubName: Full=Biopolymer transport exbB protein; chromosome CDS1903603 612 - 0.400327
exbB2 CPS_3754 biopolymer transport exbB proteinSubName: Full=Biopolymer transport exbB protein; chromosome CDS3913612 525 - 0.434286
exbB3 CPS_3974 biopolymer transport exbB proteinSubName: Full=Biopolymer transport exbB protein; chromosome CDS4168068 528 - 0.422348
exbD1 CPS_1852 biopolymer transport exbD proteinSubName: Full=Biopolymer transport exbD protein; chromosome CDS1903182 411 - 0.347932
exbD2 CPS_3753 biopolymer transport exbD proteinSubName: Full=Biopolymer transport exbD protein; chromosome CDS3913198 402 - 0.385572
exbD3 CPS_3973 biopolymer transport exbD proteinSubName: Full=Biopolymer transport exbD protein; chromosome CDS4167581 411 - 0.396594
ffh CPS_4073 signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS4280365 1392 - 0.408764
flgM CPS_1472 negative regulator of flagellin synthesis FlgMSubName: Full=Negative regulator of flagellin synthesis FlgM; chromosome CDS1513695 309 - 0.368932
flhA CPS_1516 flagellar biosynthesis protein FlhASubName: Full=Flagellar biosynthesis protein FlhA; chromosome CDS1557742 2103 + 0.398003
flhB CPS_1515 flagellar biosynthetic protein FlhBSubName: Full=Flagellar biosynthetic protein FlhB; chromosome CDS1556465 1131 + 0.390805
fliE CPS_1501 flagellar hook-basal body complex protein FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS1543263 363 + 0.393939
fliF CPS_1502 flagellar M-ring protein FliFRecName: Full=Flagellar M-ring protein; chromosome CDS1543859 1692 + 0.416667
fliH CPS_1504 flagellar assembly protein FliHSubName: Full=Flagellar assembly protein FliH; chromosome CDS1546634 789 + 0.413181
fliI CPS_1505 flagellum-specific ATP synthase FliISubName: Full=Flagellum-specific ATP synthase FliI; EC=3.6.3.14; chromosome CDS1547491 1350 + 0.42
fliN CPS_1510 flagellar motor switch protein FliNSubName: Full=Flagellar motor switch protein FliN; chromosome CDS1553393 396 + 0.378788
fliP CPS_1512 flagellar biosynthetic protein FliPSubName: Full=Flagellar biosynthetic protein FliP; chromosome CDS1554553 759 + 0.383399
fliQ CPS_1513 flagellar biosynthetic protein FliQSubName: Full=Flagellar biosynthetic protein FliQ; chromosome CDS1555375 270 + 0.4
fliR CPS_1514 flagellar biosynthetic protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS1555682 783 + 0.389527
fliS CPS_1496 flagellar protein FliSSubName: Full=Flagellar protein FliS; chromosome CDS1537508 399 - 0.37594
ftsY CPS_0157 signal recognition particle-docking protein FtsYRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS167160 1446 + 0.401107
gspC CPS_4592 general secretion pathway protein CSubName: Full=General secretion pathway protein C; chromosome CDS4846614 951 - 0.389064
gspD CPS_4591 general secretion pathway protein DSubName: Full=General secretion pathway protein D; chromosome CDS4844410 2094 - 0.401624
gspE CPS_4590 general secretion pathway protein ESubName: Full=General secretion pathway protein E; chromosome CDS4842881 1530 - 0.41634
gspF CPS_4589 general secretion pathway protein FSubName: Full=General secretion pathway protein F; chromosome CDS4841581 1242 - 0.413849
gspG CPS_4588 general secretion pathway protein GSubName: Full=General secretion pathway protein G; chromosome CDS4841091 432 - 0.402778
gspH CPS_4587 general secretion pathway protein HSubName: Full=General secretion pathway protein H; chromosome CDS4840340 621 - 0.409018
gspI CPS_4586 general secretion pathway protein ISubName: Full=General secretion pathway protein I; chromosome CDS4839967 384 - 0.414062
gspJ CPS_4585 general secretion pathway protein JSubName: Full=General secretion pathway protein J; chromosome CDS4839308 660 - 0.389394
gspK CPS_4584 general secretion pathway protein KRecName: Full=Type II secretion system protein K; chromosome CDS4838189 1116 - 0.382616
gspL CPS_4583 general secretion pathway protein LRecName: Full=Type II secretion system protein L; Short=T2SS protein L; chromosome CDS4836837 1353 - 0.405765
gspM CPS_4582 general secretion pathway protein MRecName: Full=Type II secretion system protein M; Short=T2SS protein M; AltName: Full=General secretion pathway protein M; chromosome CDS4836367 471 - 0.377919
lepB1 CPS_0009 signal peptidase ISubName: Full=Signal peptidase I; EC=3.4.21.89; chromosome CDS10789 693 - 0.369408
lepB2 CPS_1803 signal peptidase ISubName: Full=Signal peptidase I; EC=3.4.21.89; chromosome CDS1855580 762 - 0.335958
lepB3 CPS_4123 signal peptidase IRecName: Full=Signal peptidase I; EC=3.4.21.89; chromosome CDS4338786 933 - 0.381565
lspA CPS_1183 signal peptidase IIRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS1211442 543 + 0.377532
mshB CPS_4570 MSHA pilin protein MshBSubName: Full=MSHA pilin protein MshB; chromosome CDS4823238 690 - 0.381159
mshE CPS_4573 MSHA biogenesis protein MshESubName: Full=MSHA biogenesis protein MshE; chromosome CDS4825939 1713 - 0.398132
mshG CPS_4572 MSHA biogenesis protein MshGSubName: Full=MSHA biogenesis protein MshG; chromosome CDS4824659 1227 - 0.401793
mshL CPS_4576 MSHA biogenesis protein MshLSubName: Full=MSHA biogenesis protein MshL; chromosome CDS4829825 1830 - 0.390164
mshM CPS_4575 MSHA biogenesis protein MshMSubName: Full=MSHA biogenesis protein MshM; chromosome CDS4828868 903 - 0.384275
pilB CPS_4447 type IV pilus biogenesis protein PilBSubName: Full=Type IV pilus biogenesis protein PilB; chromosome CDS4683825 1701 + 0.388007
pilC CPS_4448 type IV pilus biogenesis protein PilCSubName: Full=Type IV pilus biogenesis protein PilC; chromosome CDS4685644 1260 + 0.384127
pilD CPS_4449 type 4 prepilin-like proteins leader peptide processing enzyme PilDRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS4687011 906 + 0.35872
pilE CPS_1217 type IV pilus biogenesis protein PilESubName: Full=Type IV pilus biogenesis protein PilE; chromosome CDS1251986 426 + 0.392019
pilM CPS_0467 type IV pilus biogenesis protein PilMSubName: Full=Type IV pilus biogenesis protein PilM; chromosome CDS469834 1080 + 0.400926
pilN CPS_0468 type IV pilus biogenesis protein PilNSubName: Full=Type IV pilus biogenesis protein PilN; chromosome CDS470901 567 + 0.343915
pilO CPS_0469 type IV pilus biogenesis protein PilOSubName: Full=Type IV pilus biogenesis protein PilO; chromosome CDS471467 597 + 0.368509
pilP CPS_0470 type IV pilus biogenesis protein PilPSubName: Full=Type IV pilus biogenesis protein PilP; chromosome CDS472060 555 + 0.4
pilT CPS_3662 twitching motility protein PilTSubName: Full=Twitching motility protein PilT; chromosome CDS3806379 1044 - 0.400383
pilU CPS_3661 twitching motility protein PilUSubName: Full=Twitching motility protein PilU; chromosome CDS3805205 1128 - 0.406028
secA CPS_4454 preprotein translocase, SecA subunitRecName: Full=Protein translocase subunit SecA; chromosome CDS4690796 2682 - 0.383669
secB CPS_4388 preprotein translocase, SecB subunitRecName: Full=Protein-export protein SecB; chromosome CDS4624112 498 - 0.381526
secD CPS_1122 protein-export membrane protein SecDRecName: Full=Protein translocase subunit SecD; chromosome CDS1144707 1848 + 0.395022
secE CPS_4778 preprotein translocase, SecE subunitRecName: Full=Protein translocase subunit SecE; chromosome CDS5063610 381 - 0.404199
secF CPS_1123 protein-export membrane protein SecFRecName: Full=Protein-export membrane protein SecF; chromosome CDS1146575 948 + 0.369198
secG CPS_3447 preprotein translocase, SecG subunitSubName: Full=Preprotein translocase, SecG subunit; chromosome CDS3582600 405 - 0.4
secY CPS_0621 preprotein translocase, SecY subunitRecName: Full=Protein translocase subunit SecY; chromosome CDS619717 1338 + 0.425262
sohB CPS_1193 sohB protein, peptidase U7 familySubName: Full=SohB protein, peptidase U7 family; EC=3.4.21.-; chromosome CDS1220779 1050 + 0.365714
sppA CPS_2585 signal peptide peptidase SppA, 67K typeRecName: Full=Protease 4; EC=3.4.21.-; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase; chromosome CDS2688624 1914 - 0.3814
tatA1 CPS_0163 Sec-independent protein translocase protein TatARecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS174742 258 + 0.341085
tatA2 CPS_3045 Sec-independent protein translocase protein TatARecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS3180781 240 - 0.329167
tatB1 CPS_0164 Sec-independent protein translocase protein TatBRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS175003 474 + 0.405063
tatB2 CPS_3044 Sec-independent protein translocase protein TatBRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS3180469 309 - 0.368932
tatC1 CPS_0165 Sec-independent periplasmic protein translocation protein TatCRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS175473 768 + 0.36849
tatC2 CPS_3043 Sec-independent periplasmic protein translocation protein TatCRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS3179711 759 - 0.350461
tolB CPS_1731 tolB proteinRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS1780014 1350 + 0.397778
tolC CPS_4181 outer membrane protein TolCSubName: Full=Outer membrane protein TolC; chromosome CDS4400599 1350 + 0.387407
tolQ CPS_1728 tolQ proteinSubName: Full=TolQ protein; chromosome CDS1777815 687 + 0.391557
tolR CPS_1729 tolR proteinSubName: Full=TolR protein; chromosome CDS1778511 426 + 0.443662
yajC CPS_1121 preprotein translocase, YajC subunitSubName: Full=Preprotein translocase, YajC subunit; chromosome CDS1144168 336 + 0.39881