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2024-05-17 10:37:18

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Psychrobacter arcticum 273-4, 273-4

Number of genes found: 63

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Psychrobacter arcticum 273-4, 273-4
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Psyc_1004 possible phage Peptidase U7SubName: Full=Protein C, Serine peptidase, MEROPS family S49; EC=3.4.21.69; chromosome CDS1197089 1209 + 0.468156
NA Psyc_2128 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2627328 498 - 0.459839
NA Psyc_0128 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS151802 495 - 0.412121
NA Psyc_0240 probable pilus assembly protein major pilin PilASubName: Full=Probable pilus assembly protein major pilin PilA; chromosome CDS287088 420 + 0.42381
NA Psyc_1318 probable MotA/TolQ/ExbB proton channelSubName: Full=Probable MotA/TolQ/ExbB proton channel; chromosome CDS1588570 645 - 0.460465
NA Psyc_2144 cytochrome Oxidase Biogenesis (Oxa1) FamilyRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS2647569 1698 - 0.437574
NA Psyc_1317 possible biopolymer transport protein ExbD/TolRSubName: Full=Possible biopolymer transport protein ExbD/TolR; chromosome CDS1587960 432 - 0.418981
NA Psyc_0237 possible pilus assembly protein tip-associated adhesin PilY1SubName: Full=Possible pilus assembly protein tip-associated adhesin PilY1; chromosome CDS281921 3756 + 0.455272
NA Psyc_1405 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1700490 1815 + 0.423691
NA Psyc_1013 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1202648 375 + 0.445333
NA Psyc_0238 possible pilus assembly protein PilESubName: Full=Possible pilus assembly protein PilE; chromosome CDS285723 588 + 0.491497
NA Psyc_0235 possible pilus assembly protein PilWSubName: Full=Possible pilus assembly protein PilW; chromosome CDS280100 912 + 0.434211
NA Psyc_0455 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS566176 366 - 0.439891
NA Psyc_0241 probable pilus assembly protein major pilin PilASubName: Full=Probable pilus assembly protein major pilin PilA; chromosome CDS287641 414 + 0.437198
NA Psyc_0256 possible ribonuclease EGRecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS307312 4218 - 0.457563
NA Psyc_0600 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS714998 171 + 0.45614
NA Psyc_0889 probable bacterial type II secretion system proteinSubName: Full=Probable bacterial type II secretion system protein; chromosome CDS1062776 1788 + 0.472036
NA Psyc_1781 possible heme-hemopexin-binding/utilization proteinSubName: Full=Possible heme-hemopexin-binding/utilization protein; chromosome CDS2190788 2313 - 0.483355
NA Psyc_0635 possible multiple antibiotic resistance (MarC)-related proteinsSubName: Full=Possible multiple antibiotic resistance (MarC)-related protein; chromosome CDS755911 606 + 0.445545
NA Psyc_1017 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1204939 432 + 0.481481
NA Psyc_1600 possible outer membrane efflux protein, OMF familySubName: Full=Possible outer membrane efflux protein, OMF family; chromosome CDS1957402 1545 - 0.435599
NA Psyc_1782 putative heme-hemopexin utilization protein BSubName: Full=Putative heme-hemopexin utilization protein B; chromosome CDS2193166 1665 - 0.452252
NA Psyc_1250 probable TolQ proton channelSubName: Full=Cell division and transport-associated protein TolQ; chromosome CDS1501890 732 + 0.454918
ccmD Psyc_1826 cytochrome c biogenesis protein, CcmDSubName: Full=Cytochrome c biogenesis protein, CcmD; chromosome CDS2245590 225 - 0.48
clpP Psyc_1941 putative ATP-dependent of ClpP protease, proteolytic subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS2392628 678 + 0.466077
dprA Psyc_2135 possible DNA processing proteinSubName: Full=Possible DNA processing protein; chromosome CDS2635812 1218 - 0.469622
exbB Psyc_1663 MotA/TolQ/ExbB proton channelSubName: Full=Outer membrane transport energization protein ExbB; chromosome CDS2060190 582 - 0.496564
exbD Psyc_1662 iopolymer transport protein ExbD/TolRSubName: Full=Outer membrane transport energization protein ExbD; chromosome CDS2059781 402 - 0.452736
ffh Psyc_1707 signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS2108357 1536 - 0.468099
ftsY Psyc_0934 cell division transporter substrate-binding protein FtsYRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS1120374 1437 + 0.448852
lepB Psyc_0331 possible signal peptidaseRecName: Full=Signal peptidase I; EC=3.4.21.89; chromosome CDS410955 903 + 0.451827
lspA Psyc_0363 probable signal peptidase IIRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS450659 516 - 0.447674
oprM Psyc_1577 outer membrane efflux protein, OprMSubName: Full=Outer membrane efflux protein, OprM; chromosome CDS1931653 1821 + 0.465129
pilB Psyc_0064 pilin secretion/fimbrial assembly system protein, PilBSubName: Full=Pilin secretion/fimbrial assembly system protein, PilB; chromosome CDS70862 1776 - 0.442568
pilC Psyc_0063 pilin secretion/fimbrial assembly system protein, PilCSubName: Full=Pilin secretion/fimbrial assembly system protein, PilC; chromosome CDS69402 1224 - 0.438726
pilD Psyc_0062 pilin secretion/fimbrial assembly signal peptidase, PilDRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS68477 900 - 0.424444
pilE Psyc_0239 possible pilus assembly protein PilESubName: Full=Possible pilus assembly protein PilE; chromosome CDS286310 438 + 0.46347
pilF Psyc_0680 possible type 4 fimbrial biogenesis proteinSubName: Full=Possible type 4 fimbrial biogenesis protein; chromosome CDS808500 948 + 0.444093
pilM Psyc_1883 probable type IV pilus assembly proteinSubName: Full=Probable type IV pilus assembly protein; chromosome CDS2319745 1056 - 0.45928
pilN Psyc_1882 probable type IV pilus biogenesis fimbrial assemblySubName: Full=Probable type IV pilus biogenesis fimbrial assembly; chromosome CDS2319080 666 - 0.462462
pilO Psyc_1881 probable type IV pilus biogenesisSubName: Full=Probable type IV pilus biogenesis; chromosome CDS2318355 729 - 0.441701
pilP Psyc_1880 probable type IV pilus assemblySubName: Full=Probable type IV pilus assembly; chromosome CDS2317816 540 - 0.466667
pilQ Psyc_1879 fimbrial assembly protein PilQSubName: Full=Fimbrial assembly protein PilQ; chromosome CDS2315518 2271 - 0.452224
pilT Psyc_0267 pilus retraction protein PilTSubName: Full=Pilus retraction ATPase PilT; chromosome CDS321690 1053 - 0.450142
pilU Psyc_0266 putative twitching motility protein PilUSubName: Full=Putative twitching motility protein PilU; chromosome CDS320393 1122 - 0.418004
pilV Psyc_0234 probable type IV fimbrial biogenesis protein PilVSubName: Full=Probable type IV fimbrial biogenesis protein PilV; chromosome CDS279450 651 + 0.437788
pilZ Psyc_1312 probable type IV fimbriae assembly proteinSubName: Full=Probable type IV fimbriae assembly protein; chromosome CDS1582271 348 - 0.431034
secA Psyc_0248 preprotein translocase subunit SecARecName: Full=Protein translocase subunit SecA; chromosome CDS295988 2790 + 0.455914
secB Psyc_1556 putative protein export chaperone SecBRecName: Full=Protein-export protein SecB; chromosome CDS1906127 447 + 0.451902
secD Psyc_1277 protein-export membrane protein SecDRecName: Full=Protein translocase subunit SecD; chromosome CDS1538715 1878 + 0.456869
secE Psyc_1893 preprotein translocase subunit SecERecName: Full=Protein translocase subunit SecE; chromosome CDS2337407 489 - 0.392638
secF Psyc_1278 protein-export membrane protein, SecFRecName: Full=Protein-export membrane protein SecF; chromosome CDS1540602 1245 + 0.445783
secG Psyc_0066 preprotein translocase subunit SecGSubName: Full=Protein translocase subunit secG; chromosome CDS74165 309 + 0.491909
secY Psyc_0509 preprotein translocase subunit SecYRecName: Full=Protein translocase subunit SecY; chromosome CDS605070 1332 + 0.43994
sohB Psyc_1202 probable serine peptidase (U7 family) proteinSubName: Full=Inner membrane peptidase, Serine peptidase, MEROPS family S49; chromosome CDS1443136 975 - 0.429744
sppA Psyc_0786 probable signal peptide peptidaseSubName: Full=Probable signal peptide peptidase; chromosome CDS939936 1056 + 0.447917
tatA Psyc_2000 twin-arginine translocation protein TatA/ERecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS2467043 264 + 0.420455
tatB Psyc_2001 twin-arginine translocation protein TatBRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS2467342 690 + 0.434783
tatC Psyc_2002 twin-arginine translocation protein TatCRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS2468031 837 + 0.42055
tatE Psyc_1586 twin-arginine translocation protein TatERecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS1940880 270 - 0.418519
tolB Psyc_1253 probable TolB periplasmic receptorSubName: Full=Probable TolB periplasmic receptor; chromosome CDS1504345 1293 + 0.470224
tolR Psyc_1251 probable Biopolymer transport protein (TolR)SubName: Full=Cell division and transport-associated protein TolR; chromosome CDS1502618 459 + 0.459695
yajC Psyc_1276 preprotein translocase, subunit YajCSubName: Full=Protein translocase subunit yajC; chromosome CDS1537959 327 + 0.397554