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2024-05-02 21:36:35

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Psychrobacter arcticum 273-4, 273-4

Number of genes found: 63

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Psychrobacter arcticum 273-4, 273-4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Psyc_1781 possible heme-hemopexin-binding/utilization proteinchromosome CDS2190788 2313 - 0.483355
NA Psyc_0256 possible ribonuclease EGchromosome CDS307312 4218 - 0.457563
NA Psyc_0635 possible multiple antibiotic resistance (MarC)-related proteinschromosome CDS755911 606 + 0.445545
NA Psyc_1250 probable TolQ proton channelchromosome CDS1501890 732 + 0.454918
NA Psyc_1600 possible outer membrane efflux protein, OMF familychromosome CDS1957402 1545 - 0.435599
NA Psyc_0241 probable pilus assembly protein major pilin PilAchromosome CDS287641 414 + 0.437198
NA Psyc_1013 hypothetical proteinchromosome CDS1202648 375 + 0.445333
NA Psyc_2144 cytochrome Oxidase Biogenesis (Oxa1) Familychromosome CDS2647569 1698 - 0.437574
NA Psyc_1317 possible biopolymer transport protein ExbD/TolRchromosome CDS1587960 432 - 0.418981
NA Psyc_0600 hypothetical proteinchromosome CDS714998 171 + 0.45614
NA Psyc_1017 hypothetical proteinchromosome CDS1204939 432 + 0.481481
NA Psyc_1405 conserved hypothetical proteinchromosome CDS1700490 1815 + 0.423691
NA Psyc_0237 possible pilus assembly protein tip-associated adhesin PilY1chromosome CDS281921 3756 + 0.455272
NA Psyc_1004 possible phage Peptidase U7chromosome CDS1197089 1209 + 0.468156
NA Psyc_0235 possible pilus assembly protein PilWchromosome CDS280100 912 + 0.434211
NA Psyc_0238 possible pilus assembly protein PilEchromosome CDS285723 588 + 0.491497
NA Psyc_1782 putative heme-hemopexin utilization protein Bchromosome CDS2193166 1665 - 0.452252
NA Psyc_1318 probable MotA/TolQ/ExbB proton channelchromosome CDS1588570 645 - 0.460465
NA Psyc_0128 hypothetical proteinchromosome CDS151802 495 - 0.412121
NA Psyc_0889 probable bacterial type II secretion system proteinchromosome CDS1062776 1788 + 0.472036
NA Psyc_0240 probable pilus assembly protein major pilin PilAchromosome CDS287088 420 + 0.42381
NA Psyc_2128 conserved hypothetical proteinchromosome CDS2627328 498 - 0.459839
NA Psyc_0455 hypothetical proteinchromosome CDS566176 366 - 0.439891
ccmD Psyc_1826 cytochrome c biogenesis protein, CcmDchromosome CDS2245590 225 - 0.48
clpP Psyc_1941 putative ATP-dependent of ClpP protease, proteolytic subunitchromosome CDS2392628 678 + 0.466077
dprA Psyc_2135 possible DNA processing proteinchromosome CDS2635812 1218 - 0.469622
exbB Psyc_1663 MotA/TolQ/ExbB proton channelchromosome CDS2060190 582 - 0.496564
exbD Psyc_1662 iopolymer transport protein ExbD/TolRchromosome CDS2059781 402 - 0.452736
ffh Psyc_1707 signal recognition particle proteinchromosome CDS2108357 1536 - 0.468099
ftsY Psyc_0934 cell division transporter substrate-binding protein FtsYchromosome CDS1120374 1437 + 0.448852
lepB Psyc_0331 possible signal peptidasechromosome CDS410955 903 + 0.451827
lspA Psyc_0363 probable signal peptidase IIchromosome CDS450659 516 - 0.447674
oprM Psyc_1577 outer membrane efflux protein, OprMchromosome CDS1931653 1821 + 0.465129
pilB Psyc_0064 pilin secretion/fimbrial assembly system protein, PilBchromosome CDS70862 1776 - 0.442568
pilC Psyc_0063 pilin secretion/fimbrial assembly system protein, PilCchromosome CDS69402 1224 - 0.438726
pilD Psyc_0062 pilin secretion/fimbrial assembly signal peptidase, PilDchromosome CDS68477 900 - 0.424444
pilE Psyc_0239 possible pilus assembly protein PilEchromosome CDS286310 438 + 0.46347
pilF Psyc_0680 possible type 4 fimbrial biogenesis proteinchromosome CDS808500 948 + 0.444093
pilM Psyc_1883 probable type IV pilus assembly proteinchromosome CDS2319745 1056 - 0.45928
pilN Psyc_1882 probable type IV pilus biogenesis fimbrial assemblychromosome CDS2319080 666 - 0.462462
pilO Psyc_1881 probable type IV pilus biogenesischromosome CDS2318355 729 - 0.441701
pilP Psyc_1880 probable type IV pilus assemblychromosome CDS2317816 540 - 0.466667
pilQ Psyc_1879 fimbrial assembly protein PilQchromosome CDS2315518 2271 - 0.452224
pilT Psyc_0267 pilus retraction protein PilTchromosome CDS321690 1053 - 0.450142
pilU Psyc_0266 putative twitching motility protein PilUchromosome CDS320393 1122 - 0.418004
pilV Psyc_0234 probable type IV fimbrial biogenesis protein PilVchromosome CDS279450 651 + 0.437788
pilZ Psyc_1312 probable type IV fimbriae assembly proteinchromosome CDS1582271 348 - 0.431034
secA Psyc_0248 preprotein translocase subunit SecAchromosome CDS295988 2790 + 0.455914
secB Psyc_1556 putative protein export chaperone SecBchromosome CDS1906127 447 + 0.451902
secD Psyc_1277 protein-export membrane protein SecDchromosome CDS1538715 1878 + 0.456869
secE Psyc_1893 preprotein translocase subunit SecEchromosome CDS2337407 489 - 0.392638
secF Psyc_1278 protein-export membrane protein, SecFchromosome CDS1540602 1245 + 0.445783
secG Psyc_0066 preprotein translocase subunit SecGchromosome CDS74165 309 + 0.491909
secY Psyc_0509 preprotein translocase subunit SecYchromosome CDS605070 1332 + 0.43994
sohB Psyc_1202 probable serine peptidase (U7 family) proteinchromosome CDS1443136 975 - 0.429744
sppA Psyc_0786 probable signal peptide peptidasechromosome CDS939936 1056 + 0.447917
tatA Psyc_2000 twin-arginine translocation protein TatA/Echromosome CDS2467043 264 + 0.420455
tatB Psyc_2001 twin-arginine translocation protein TatBchromosome CDS2467342 690 + 0.434783
tatC Psyc_2002 twin-arginine translocation protein TatCchromosome CDS2468031 837 + 0.42055
tatE Psyc_1586 twin-arginine translocation protein TatEchromosome CDS1940880 270 - 0.418519
tolB Psyc_1253 probable TolB periplasmic receptorchromosome CDS1504345 1293 + 0.470224
tolR Psyc_1251 probable Biopolymer transport protein (TolR)chromosome CDS1502618 459 + 0.459695
yajC Psyc_1276 preprotein translocase, subunit YajCchromosome CDS1537959 327 + 0.397554