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2024-05-05 16:28:29

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978

Number of genes found: 167

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPPH_4452 membrane protein, MarC familychromosome CDS5087280 597 + 0.556114
NA PSPPH_1520 LysM domain proteinchromosome CDS1767168 2208 + 0.620471
NA PSPPH_0812 outer membrane efflux proteinchromosome CDS956683 1407 + 0.583511
NA PSPPH_4438 type II secretion system protein F domainchromosome CDS5070961 885 + 0.584181
NA PSPPH_1201 Outer membrane usher protein fimD precursorchromosome CDS1410952 2556 + 0.592723
NA PSPPH_4436 general secretion pathway/type 4 pilus assembly proteinchromosome CDS5068798 1257 + 0.608592
NA PSPPH_0729 PilX proteinchromosome CDS851205 522 + 0.54023
NA PSPPH_2521 type III secretion component, putativechromosome CDS2909159 1314 + 0.608067
NA PSPPH_2319 twitching motility proteinchromosome CDS2693533 1170 + 0.605983
NA PSPPH_2534 type III secretion component, putativechromosome CDS2918314 906 + 0.616998
NA PSPPH_2529 type III secretion component, putativechromosome CDS2914511 597 + 0.639866
NA PSPPH_0821 type IV pilinchromosome CDS982619 396 + 0.520202
NA PSPPH_4829 cobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC familychromosome CDS5482038 1227 + 0.648737
NA PSPPH_5050 biopolymer transport protein ExbD, putativechromosome CDS5725258 402 - 0.559702
NA PSPPH_1626 MotA/TolQ/ExbB proton channel family proteinchromosome CDS1889241 678 + 0.59292
NA PSPPH_4306 hypothetical proteinchromosome CDS4918432 1725 - 0.569855
NA PSPPH_B0028 conjugal transfer proteinsmall plasmid CDS21475 2553 + 0.581669
NA PSPPH_A0147 conjugal transfer proteinlarge plasmid CDS130059 549 + 0.612022
NA PSPPH_0795 probable secretion protein PA4144chromosome CDS940273 1467 + 0.597819
NA PSPPH_2010 fimbrial proteinchromosome CDS2361084 1116 - 0.577957
NA PSPPH_4491 conserved hypothetical proteinchromosome CDS5124936 975 + 0.53641
NA PSPPH_5220 inner membrane protein, 60 kDachromosome CDS5924445 1692 - 0.557329
NA PSPPH_1101 outer membrane efflux lipoprotein, NodT familychromosome CDS1295169 1482 + 0.628205
NA PSPPH_0760 type IV pilus protein PilV2, putative, truncatedchromosome CDS889863 978 - 0.572597
NA PSPPH_3789 conserved hypothetical proteinchromosome CDS4339872 1335 + 0.609738
NA PSPPH_0534 outer membrane efflux protein TolC, putativechromosome CDS626965 1416 - 0.611582
NA PSPPH_0730 type IV pilus-associated protein, putativechromosome CDS851710 3201 + 0.532334
NA PSPPH_2271 outer membrane efflux proteinchromosome CDS2633561 1398 - 0.6402
NA PSPPH_1627 biopolymer transport protein ExbD/TolR familychromosome CDS1889915 432 + 0.581019
NA PSPPH_0978 hypothetical proteinchromosome CDS1167139 1389 - 0.556515
NA PSPPH_2530 type III secretion component, putativechromosome CDS2915100 1329 + 0.62754
NA PSPPH_0237 type IV pilus biogenesis proteinchromosome CDS273184 1785 - 0.60112
NA PSPPH_4435 conserved hypothetical proteinchromosome CDS5067608 1191 + 0.621327
NA PSPPH_3293 conserved hypothetical proteinchromosome CDS3817142 606 - 0.584158
NA PSPPH_B0031 conjugal transfer proteinsmall plasmid CDS25107 936 + 0.537393
NA PSPPH_1199 fimbrial proteinchromosome CDS1409424 585 + 0.557265
NA PSPPH_0469 twitching motility proteinchromosome CDS532037 1035 + 0.598068
NA PSPPH_0728 conserved hypothetical proteinchromosome CDS850501 708 + 0.526836
NA PSPPH_1655 LysM domain proteinchromosome CDS1915582 2832 + 0.605932
NA PSPPH_3548 conserved hypothetical proteinchromosome CDS4084264 480 + 0.591667
NA PSPPH_4433 Flp pilus assembly protein CpaB familychromosome CDS5065399 942 + 0.631635
NA PSPPH_B0036 conjugal transfer proteinsmall plasmid CDS29425 1032 + 0.580426
NA PSPPH_A0064 outer-membrane fimbrial usher proteinlarge plasmid CDS52693 2496 + 0.546074
NA PSPPH_B0035 conjugal transfer proteinsmall plasmid CDS28015 1401 + 0.62384
NA PSPPH_3301 outer membrane efflux lipoprotein, NodT familychromosome CDS3824838 1434 + 0.635286
NA PSPPH_1200 pili assembly chaperonechromosome CDS1410072 762 + 0.536745
NA PSPPH_2538 type III secretion component, putativechromosome CDS2920968 1047 + 0.593123
NA PSPPH_4015 outer membrane efflux lipoprotein, NodT familychromosome CDS4588903 1461 + 0.610541
NA PSPPH_4007 conserved hypothetical proteinchromosome CDS4578772 357 + 0.596639
NA PSPPH_4437 type II secretion system protein F domain proteinchromosome CDS5070076 885 + 0.6
NA PSPPH_0725 type IV pilus biogenesis proteinchromosome CDS848891 501 - 0.566866
NA PSPPH_3060 general secretion pathway protein GspIchromosome CDS3554242 372 - 0.599462
NA PSPPH_3415 flagellin synthesis, negative regulator, FlgM, putativechromosome CDS3947837 315 + 0.51746
NA PSPPH_0912 TonB system transport proteinchromosome CDS1086201 408 + 0.544118
NA PSPPH_4560 filamentous hemagglutininchromosome CDS5199126 5547 - 0.619073
NA PSPPH_2180 general secretion pathway protein GspM, putativechromosome CDS2532398 549 + 0.604736
NA PSPPH_2527 type III secretion component, putativechromosome CDS2913122 780 + 0.60641
NA PSPPH_2380 outer membrane proteinchromosome CDS2761245 1410 + 0.611347
NA PSPPH_0726 type IV pilin, putativechromosome CDS849523 477 + 0.561845
NA PSPPH_2536 type III secretion component, putativechromosome CDS2919877 270 + 0.603704
NA PSPPH_1934 outer membrane efflux lipoprotein, NodT familychromosome CDS2278901 1404 - 0.630342
NA PSPPH_B0059 exeA-like proteinsmall plasmid CDS50287 972 + 0.61214
NA PSPPH_0982 outer membrane efflux proteinchromosome CDS1173415 1401 + 0.587438
NA PSPPH_2520 type III secretion component, putativechromosome CDS2906979 2184 + 0.599359
NA PSPPH_0915 MotA/TolQ/ExbB proton channel family proteinchromosome CDS1089701 651 + 0.59447
NA PSPPH_4081 conserved hypothetical proteinchromosome CDS4663088 1008 - 0.543651
NA PSPPH_2535 type III secretion component, putativechromosome CDS2919216 657 + 0.554033
NA PSPPH_2394 prophage PSPPH04, tail fiber domain proteinchromosome CDS2773364 981 + 0.529052
NA PSPPH_3332 outer membrane autotransporterchromosome CDS3857989 2295 - 0.566449
NA PSPPH_A0063 fimbrial chaperone protein, periplasmiclarge plasmid CDS51922 738 + 0.498645
NA PSPPH_1165 Outer membrane efflux protein superfamilychromosome CDS1367369 675 - 0.591111
NA PSPPH_2616 peptidase, U7 familychromosome CDS3014514 1023 + 0.580645
NA PSPPH_4418 type IV leader peptidase familychromosome CDS5043760 474 + 0.57384
NA PSPPH_A0146 conjugal transfer proteinlarge plasmid CDS129758 312 + 0.557692
NA PSPPH_2011 outer membrane usher protein fimDchromosome CDS2362247 2517 - 0.603496
NA PSPPH_2012 chaperone protein PapDchromosome CDS2364800 699 - 0.563662
NA PSPPH_B0041 conjugal transfer proteinsmall plasmid CDS33866 1653 + 0.571083
NA PSPPH_2537 type III secretion component, putativechromosome CDS2920153 819 + 0.562882
NA PSPPH_2851 TonB system transport protein ExbBchromosome CDS3295411 687 - 0.588064
NA PSPPH_B0033 conjugal transfer proteinsmall plasmid CDS26441 789 + 0.585551
NA PSPPH_4439 TPR domain proteinchromosome CDS5071915 669 + 0.599402
NA PSPPH_0731 type IV pilus biogenesis proteinchromosome CDS854922 405 + 0.572839
NA PSPPH_A0145 conjugal transfer proteinlarge plasmid CDS127806 1956 + 0.583333
NA PSPPH_0397 conserved hypothetical proteinchromosome CDS453653 1620 + 0.619753
NA PSPPH_5051 biopolymer transport protein ExbB, putativechromosome CDS5725659 708 - 0.620057
NA PSPPH_4434 bacterial type II/III secretion system proteinchromosome CDS5066361 1251 + 0.586731
NA PSPPH_2643 outer membrane efflux proteinchromosome CDS3056324 1470 + 0.608163
NA PSPPH_0781 haemagglutination activity domain familychromosome CDS918727 4752 + 0.577231
NA PSPPH_2524 type III secretion component, putativechromosome CDS2911838 612 + 0.609477
NA PSPPH_B0034 conjugal transfer proteinsmall plasmid CDS27219 810 + 0.602469
NA PSPPH_2173 general secretion pathway protein GspJ, putativechromosome CDS2527616 612 - 0.581699
NA PSPPH_0780 outer membrane protein, OMP85 family, putativechromosome CDS916954 1728 + 0.601273
ccmD PSPPH_3311 heme exporter protein Dchromosome CDS3834295 177 - 0.59887
clpP PSPPH_1698 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS1962205 642 + 0.566978
exbB1 PSPPH_0193 TonB system transport protein ExbB1chromosome CDS231179 945 - 0.614815
exbB2 PSPPH_2888 TonB system transport protein ExbB2chromosome CDS3337607 729 - 0.621399
exbD1 PSPPH_0192 TonB system transport protein ExbD1chromosome CDS230750 426 - 0.584507
exbD2 PSPPH_2887 TonB system transport protein ExbD2chromosome CDS3337204 402 - 0.562189
ffh PSPPH_1353 signal recognition particle proteinchromosome CDS1569934 1506 + 0.592297
fimA PSPPH_2013 type I fimbrial protein FimAchromosome CDS2365654 558 - 0.589606
flhA PSPPH_3366 flagellar biosynthesis protein FlhAchromosome CDS3893910 2130 - 0.573239
flhB PSPPH_3367 flagellar biosynthetic protein FlhBchromosome CDS3896612 1137 - 0.588391
fliE PSPPH_3384 flagellar hook-basal body complex protein FliEchromosome CDS3912009 330 - 0.557576
fliF PSPPH_3383 flagellar M-ring protein FliFchromosome CDS3910209 1785 - 0.605042
fliH PSPPH_3381 flagellar assembly protein Flihchromosome CDS3908360 825 - 0.586667
fliI PSPPH_3380 flagellum-specific ATP synthase FliIchromosome CDS3907012 1359 - 0.633554
fliJ PSPPH_3379 flagellar protein FliJchromosome CDS3906556 450 - 0.588889
fliN PSPPH_3372 flagellar motor switch protein FliNchromosome CDS3900030 459 - 0.581699
fliP PSPPH_3370 flagellar biosynthetic protein FliPchromosome CDS3898837 753 - 0.565737
fliQ PSPPH_3369 flagellar biosynthetic protein FliQchromosome CDS3898542 270 - 0.577778
fliR PSPPH_3368 flagellar biosynthetic protein FliRchromosome CDS3897750 777 - 0.566281
fliS PSPPH_3389 flagellar protein FliSchromosome CDS3917310 399 - 0.576441
ftsY PSPPH_4781 signal recognition particle-docking protein FtsYchromosome CDS5425048 1503 - 0.608782
gspD1 PSPPH_3054 general secretion pathway protein GspDchromosome CDS3548348 2280 - 0.610526
gspD2 PSPPH_2181 general secretion pathway protein GspDchromosome CDS2532946 2337 + 0.604621
gspE1 PSPPH_3064 general secretion pathway protein GspEchromosome CDS3556712 1758 - 0.62116
gspE2 PSPPH_2182 general secretion pathway protein GspEchromosome CDS2535279 1419 + 0.616631
gspF1 PSPPH_3063 general secretion pathway protein GspFchromosome CDS3555513 1203 - 0.620116
gspF2 PSPPH_2183 general secretion pathway protein GspFchromosome CDS2536697 1212 + 0.612211
gspG1 PSPPH_3062 general secretion pathway protein GspGchromosome CDS3555056 432 - 0.606481
gspG2 PSPPH_2177 general secretion pathway protein GspGchromosome CDS2529792 450 + 0.6
gspH1 PSPPH_3061 general secretion pathway protein GspHchromosome CDS3554613 435 - 0.609195
gspH2 PSPPH_2174 general secretion pathway protein GspHchromosome CDS2528224 423 - 0.600473
gspI2 PSPPH_2176 general secretion pathway protein GspIchromosome CDS2529231 393 - 0.590331
hrcC PSPPH_1280 type III outer membrane protein HrcCchromosome CDS1492115 2100 + 0.58
hrcJ PSPPH_1275 type III secretion component protein HrcJchromosome CDS1489437 807 + 0.600991
hrcN PSPPH_1290 type III secretion component protein HrcNchromosome CDS1499874 1350 - 0.638519
hrcQb PSPPH_1286 type III secretion component protein HrcQbchromosome CDS1497757 387 - 0.622739
hrcR PSPPH_1285 type III secretion component protein HrcRchromosome CDS1497107 627 - 0.574163
hrcS PSPPH_1284 type III secretion component protein HrcSchromosome CDS1496833 267 - 0.606742
hrcT PSPPH_1283 type III secretion component protein HrcTchromosome CDS1496038 795 - 0.605031
hrcU PSPPH_1282 type III secretion component protein HrcUchromosome CDS1494962 1080 - 0.565741
hrcV PSPPH_1292 type III secretion component protein HrcVchromosome CDS1502228 2088 - 0.590996
hrpW1 PSPPH_1264 type III helper protein HrpW1chromosome CDS1472985 1197 - 0.54386
lepB PSPPH_3950 signal peptidase Ichromosome CDS4511685 855 - 0.546199
lspA PSPPH_0722 signal peptidase IIchromosome CDS846904 507 + 0.566075
nfrB PSPPH_1081 bacteriophage N4 adsorption protein Bchromosome CDS1271024 2121 - 0.583687
pilB PSPPH_0820 type IV pilus biogenesis protein PilBchromosome CDS980700 1695 - 0.523894
pilC PSPPH_0819 type IV pilus biogenesis protein PilCchromosome CDS979480 1218 - 0.493432
pilD PSPPH_0818 type IV pilus prepilin peptidase PilDchromosome CDS978606 873 - 0.601375
pilF PSPPH_1318 type IV pilus biogenesis protein PilFchromosome CDS1527006 759 + 0.550725
pilM PSPPH_0390 type IV pilus biogenesis protein PilMchromosome CDS446940 1065 + 0.6
pilN PSPPH_0391 type IV pilus biogenesis protein PilNchromosome CDS448004 600 + 0.575
pilO PSPPH_0392 type IV pilus biogenesis protein PilOchromosome CDS448600 624 + 0.560897
pilP PSPPH_0393 type IV pilus biogenesis protein PilPchromosome CDS449220 528 + 0.592803
pilQ PSPPH_0394 type IV pilus biogenesis protein PilQchromosome CDS449795 2106 + 0.58452
pilZ PSPPH_1648 type IV pilus biogenesis protein PilZchromosome CDS1910083 357 + 0.551821
secA PSPPH_4100 preprotein translocase, SecA subunitchromosome CDS4683005 2742 - 0.572939
secB PSPPH_4913 protein-export protein SecBchromosome CDS5586316 489 - 0.582822
secD PSPPH_1302 protein-export membrane protein SecDchromosome CDS1513416 1869 + 0.579454
secE PSPPH_4605 preprotein translocase, SecE subunitchromosome CDS5243620 369 - 0.509485
secF PSPPH_1303 protein-export membrane protein SecFchromosome CDS1515294 912 + 0.593202
secG PSPPH_4194 preprotein translocase, SecG subunitchromosome CDS4781058 381 - 0.501312
secY PSPPH_4572 preprotein translocase, SecY subunitchromosome CDS5216885 1335 - 0.540075
smf PSPPH_0023 DNA processing protein DprAchromosome CDS28297 1119 + 0.636282
sppA PSPPH_1635 signal peptide peptidase SppA, 36K typechromosome CDS1899340 999 + 0.574575
tatA PSPPH_0367 sec-independent protein translocase TatAchromosome CDS422102 276 - 0.557971
tatB PSPPH_0366 sec-independent protein translocase TatBchromosome CDS421636 462 - 0.623377
tatC PSPPH_0365 Sec-independent protein translocase TatCchromosome CDS420839 801 - 0.580524
tliF PSPPH_3072 ABC transporter, permease proteinchromosome CDS3568941 1350 - 0.600741
tolB PSPPH_3767 tolB proteinchromosome CDS4317637 1302 - 0.559908
tolQ1 PSPPH_2989 tolQ proteinchromosome CDS3469700 711 - 0.618847
tolQ2 PSPPH_3770 tolQ proteinchromosome CDS4320484 696 - 0.583333
tolR1 PSPPH_2988 tolR proteinchromosome CDS3469244 447 - 0.597315
tolR2 PSPPH_3769 tolR proteinchromosome CDS4320005 465 - 0.55914
tolr PSPPH_2850 TonB system transport protein ExbDchromosome CDS3295005 438 - 0.607306
yajC PSPPH_1301 preprotein translocase, YajC subunitchromosome CDS1513017 336 + 0.5625