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2024-05-05 13:15:39

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Silicibacter pomeroyi DSS-3, DSS-3

Number of genes found: 46

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Silicibacter pomeroyi DSS-3, DSS-3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPO3091 type II/IV secretion system protein, TadC subfamilychromosome CDS3301563 969 + 0.610939
NA SPO0532 inner membrane protein YidC, putativechromosome CDS526973 1830 - 0.629508
NA SPO3333 conserved domain proteinchromosome CDS3535008 1587 + 0.608066
NA SPO3090 type II/IV secretion system protein, TadA subfamilychromosome CDS3300112 1440 + 0.630556
NA SPO0081 conserved hypothetical proteinchromosome CDS79789 609 - 0.619048
NA SPO1240 type I secretion outer membrane protein, TolC familychromosome CDS1308540 1419 + 0.660324
NA SPO3640 peptidase, family S49chromosome CDS3841970 846 - 0.661939
NA SPO2683 twin-arginine translocation protein, TatA/E familychromosome CDS2836150 216 - 0.611111
NA SPO3089 ATPase, putativechromosome CDS3298759 1329 + 0.630549
NA SPO2713 SecA DEAD domain protein/helicase, putativechromosome CDS2867244 1959 - 0.678407
NA SPO3086 CpaB family proteinchromosome CDS3295503 918 + 0.64597
NA SPOA0013 conserved hypothetical proteinmegaplasmid CDS11344 666 + 0.642643
NA SPO3092 type II/IV secretion system protein, TadC subfamilychromosome CDS3302542 981 + 0.602446
NA SPO3078 DNA processing protein DprA, putativechromosome CDS3287129 1149 + 0.691906
NA SPO2716 type I secretion target repeat proteinchromosome CDS2873400 24282 - 0.628861
NA SPO0958 membrane protein, putativechromosome CDS1009820 1233 - 0.668289
NA SPO2448 membrane protein, MarC familychromosome CDS2601566 621 + 0.673108
NA SPO3111 biopolymer transport protein, ExbD/TolR familychromosome CDS3322955 480 - 0.675
NA SPO0180 flagellar hook-basal body complex protein FliE, putativechromosome CDS198271 291 - 0.670103
NA SPO3087 bacterial type II/III secretion system proteinchromosome CDS3296595 1428 + 0.633753
NA SPO2058 conserved hypothetical proteinchromosome CDS2190590 768 + 0.64974
NA SPO3109 TolB, putativechromosome CDS3320487 1320 - 0.657576
NA SPO2618 conserved domain proteinchromosome CDS2774502 273 + 0.630037
clpP SPO1003 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS1055324 630 + 0.596825
ffh SPO3246 signal recognition particle proteinchromosome CDS3449530 1533 + 0.647749
flhA SPO0170 flagellar biosynthesis protein FlhAchromosome CDS190330 2088 + 0.649425
flhB SPO0172 flagellar biosynthetic protein FlhBchromosome CDS193184 1089 + 0.644628
fliF SPO0199 flagellar M-ring protein FliFchromosome CDS216632 1605 - 0.623053
fliI SPO0183 H+-transporting two-sector ATPase, flagellum-specificchromosome CDS199455 1338 + 0.672646
fliN SPO0197 flagellar motor switch protein FliNchromosome CDS215756 330 - 0.612121
fliP SPO0196 flagellar biosynthetic protein FliPchromosome CDS215016 744 - 0.619624
fliQ SPO0179 flagellar biosynthetic protein FliQchromosome CDS197995 273 - 0.586081
fliR SPO0171 flagellar biosynthetic protein FliRchromosome CDS192414 774 + 0.665375
ftsY SPO1339 signal recognition particle-docking protein FtsYchromosome CDS1400200 1173 - 0.681159
lepB SPO3199 signal peptidase Ichromosome CDS3411015 840 - 0.610714
lspA SPO3373 lipoprotein signal peptidasechromosome CDS3575045 474 - 0.607595
secA SPO0057 preprotein translocase, SecA subunitchromosome CDS57011 2706 - 0.621951
secB SPO3888 protein-export protein SecBchromosome CDS4102594 498 + 0.608434
secD SPO2321 protein-export membrane protein SecDchromosome CDS2456055 1662 - 0.649819
secE SPO3517 preprotein translocase, SecE subunitchromosome CDS3726779 234 - 0.602564
secF SPO2320 protein-export membrane protein SecFchromosome CDS2455085 969 - 0.620227
secY SPO0506 preprotein translocase, SecY subunitchromosome CDS503545 1368 + 0.613304
tatB SPO2682 twin-arginine translocation protein TatBchromosome CDS2835685 459 - 0.681917
tatC SPO2681 twin-arginine translocation protein TatCchromosome CDS2834750 939 - 0.624068
tolQ SPO3112 proton transporter TolQchromosome CDS3323438 696 - 0.655172
yajC SPO2322 preprotein translocase, YajC subunitchromosome CDS2457745 366 - 0.592896