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2024-05-06 15:28:27

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Vibrio fischeri ES114, ES114

Number of genes found: 128

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio fischeri ES114, ES114
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA VFB41 channel protein VirB9pES100 CDS29523 909 + 0.393839
NA VFA0069 hypothetical proteinchromosome II CDS72806 774 + 0.366925
NA VF0257 Protein translocase subunit SecYchromosome I CDS262831 1332 + 0.436937
NA VFB29 exonuclease sbcCpES100 CDS18517 1554 + 0.39897
NA VF2296 pili assembly protein PilNchromosome I CDS2585455 567 - 0.37037
NA VF0517 TadB-like protein involved in pilus formation and/or protein secretionchromosome I CDS553838 918 + 0.376906
NA VF2541 DNA processing proteinchromosome I CDS2869577 1110 - 0.431532
NA VF1967 protein translocase subunit SecDchromosome I CDS2203820 1857 - 0.417878
NA VF2185 pilin subunit PilAchromosome I CDS2463455 405 + 0.390123
NA VF0003 60 kDa inner membrane protein YidCchromosome I CDS2281 1626 - 0.407749
NA VF2465 general secretion pathway protein Mchromosome I CDS2770130 492 - 0.398374
NA VF2342 periplasmic protein CpxPchromosome I CDS2638247 285 - 0.396491
NA VFB44 protein VirD4pES100 CDS32705 1827 + 0.380405
NA VF1841 flagellar biosynthetic protein FliQchromosome I CDS2079004 270 - 0.414815
NA VFA0224 TadB-like protein involved in pilus formation and/or protein secretionchromosome II CDS248626 924 + 0.339827
NA VFB55 channel protein VirB6pES100 CDS44803 1035 + 0.386473
NA VF0875 protein translocase subunit SecDchromosome I CDS959801 1824 - 0.439145
NA VFA0195 TolR proteinchromosome II CDS218855 405 + 0.404938
NA VFA0194 TolQ proteinchromosome II CDS218349 510 + 0.421569
NA VF1852 flagellar M-ring protein FliFchromosome I CDS2087694 1734 - 0.412918
NA VF0051 Sec-independent protein translocase protein TatCchromosome I CDS57082 756 + 0.398148
NA VFB39 VirB4 ATPasepES100 CDS26299 2454 + 0.405053
NA VF2293 pili secretion protein PilQchromosome I CDS2582591 1749 - 0.392224
NA VF0958 TolQ proteinchromosome I CDS1053141 687 + 0.403202
NA VF1223 TolR proteinchromosome I CDS1360035 420 - 0.354762
NA VF1968 protein translocase subunit YajCchromosome I CDS2205730 336 - 0.395833
NA VFB40 channel protein VirB8pES100 CDS28836 681 + 0.41116
NA VF2233 type I secretion outer membrane proteinchromosome I CDS2511967 1326 + 0.404977
NA VFA1163 type I secretion outer membrane proteinchromosome II CDS1318554 1317 + 0.374336
NA VFA1162 iron-regulated protein FrpCchromosome II CDS1306213 11802 - 0.415269
NA VFA0777 TolR proteinchromosome II CDS871282 405 - 0.404938
NA VF1837 flagellar biosynthesis protein FlhAchromosome I CDS2073939 2094 - 0.417861
NA VF0522 TadG-like proteinchromosome I CDS557374 1398 + 0.388412
NA VF0959 TolR proteinchromosome I CDS1053827 447 + 0.380313
NA VF2466 general secretion pathway protein Lchromosome I CDS2770621 1254 - 0.407496
NA VF2349 protein translocase subunit SecBchromosome I CDS2643743 471 - 0.430998
NA VFA0225 bipartite nuclear localization signal containing protein, similar to TadCchromosome II CDS249519 912 + 0.330044
NA VF1849 flagellum-specific ATP synthasechromosome I CDS2084429 1320 - 0.431061
NA VF1839 flagellar biosynthetic protein FlhBchromosome I CDS2077008 1131 - 0.40672
NA VF2187 pilus assembly protein PilCchromosome I CDS2465574 1239 + 0.37611
NA VF0363 general secretion pathway protein Fchromosome I CDS396345 1227 + 0.398533
NA VF1040 possible protease SohBchromosome I CDS1149236 1062 + 0.382298
NA VF2456 multiple antibiotic resistance protein MarCchromosome I CDS2762379 594 + 0.39899
NA VF2375 multiple antibiotic resistance protein MarCchromosome I CDS2668998 624 + 0.402244
NA VFA0868 TcpT, toxin co-regulated pilus biosynthesis proteinchromosome II CDS981908 1494 - 0.314592
NA VFA0229 TadG-like proteinchromosome II CDS252181 1272 + 0.387579
NA VF2467 general secretion pathway protein Kchromosome I CDS2771843 1035 - 0.395169
NA VF2186 pilus assembly protein PilBchromosome I CDS2463866 1689 + 0.419775
NA VFA0220 general secretion pathway protein Dchromosome II CDS244266 1323 + 0.349962
NA VF0362 type 4 fimbrial assembly protein PilBchromosome I CDS394611 1725 + 0.4
NA VF0512 conserved hypothetical proteinchromosome I CDS548661 813 + 0.372694
NA VF1617 hypothetical proteinchromosome I CDS1815586 396 + 0.348485
NA VF0962 TolB proteinchromosome I CDS1056432 1353 + 0.385809
NA VF1858 flagellar protein FliSchromosome I CDS2095181 411 - 0.399027
NA VF0483 protein translocase subunit SecGchromosome I CDS518936 333 + 0.426426
NA VFA0872 TcpC, toxin co-regulated pilus biosynthesis outer membrane proteinchromosome II CDS985094 1455 - 0.329897
NA VF1643 signal peptide peptidase SppAchromosome I CDS1851358 1857 + 0.391492
NA VF0050 Sec-independent protein translocase protein TatBchromosome I CDS56699 381 + 0.419948
NA VFA0218 fimbrial protein precursor Flp1chromosome II CDS242799 219 + 0.351598
NA VF2294 pilus expression proteinchromosome I CDS2584366 519 - 0.421965
NA VF0796 ATP-dependent Clp protease proteolytic subunitchromosome I CDS871676 624 + 0.407051
NA VF2472 general secretion pathway protein Fchromosome I CDS2775044 1215 - 0.405761
NA VFB26 hypothetical proteinpES100 CDS15333 1440 + 0.395139
NA VF0368 MshDchromosome I CDS400029 582 + 0.395189
NA VF1821 heme exporter protein Dchromosome I CDS2060880 207 - 0.36715
NA VF0432 pili retraction protein PilUchromosome I CDS460411 1101 + 0.420527
NA VF2243 general secretion pathway protein Achromosome I CDS2525780 1557 - 0.391137
NA VFA0779 TolQ proteinchromosome II CDS872216 1353 - 0.386548
NA VF0627 PilF proteinchromosome I CDS683798 633 + 0.406003
NA VF0510 fimbrial protein precursorchromosome I CDS547989 216 + 0.375
NA VF0018 NADH dehydrogenase subunit II-related proteinchromosome I CDS20925 252 + 0.388889
NA VF2473 general secretion pathway protein Echromosome I CDS2776259 1500 - 0.408
NA VF1850 flagellar assembly protein FliHchromosome I CDS2085748 798 - 0.39599
NA VF0359 general secretion pathway protein Dchromosome I CDS390980 1641 + 0.398537
NA VFA0443 copper/silver resistance outer membrane proteinchromosome II CDS507325 1335 + 0.373034
NA VF0511 hypothetical proteinchromosome I CDS548216 438 + 0.287671
NA VF2297 pili assembly protein PilMchromosome I CDS2586006 1002 - 0.370259
NA VF2088 signal peptidase Ichromosome I CDS2330734 903 - 0.41639
NA VF1162 outer membrane protein TolCchromosome I CDS1291644 1281 + 0.373927
NA VF0369 hypothetical proteinchromosome I CDS400610 726 + 0.349862
NA VF0570 hypothetical proteinchromosome I CDS624844 645 - 0.344186
NA VFB42 channel protein VirB10pES100 CDS30428 1191 + 0.420655
NA VF0049 Sec-independent protein translocase protein TatAchromosome I CDS56447 249 + 0.353414
NA VFA0167 hypothetical proteinchromosome II CDS189879 453 + 0.392936
NA VFB43 VirB11 ATPasepES100 CDS31621 1008 + 0.400794
NA VF0431 pili retraction protein PilTchromosome I CDS459371 1038 + 0.399807
NA VF1881 negative regulator of flagellin synthesis FlgMchromosome I CDS2120388 312 + 0.400641
NA VFA0148 PilA-like type-IV pilus proteinchromosome II CDS164865 387 - 0.366925
NA VF2474 general secretion pathway protein Dchromosome I CDS2777758 2022 - 0.417903
NA VF0516 putative type IV secretion NTPase similar to TadAchromosome I CDS552549 1290 + 0.390698
NA VF1842 flagellar biosynthetic protein FliPchromosome I CDS2079283 870 - 0.406897
NA VFA0077 MshOchromosome II CDS84201 795 - 0.426415
NA VF2475 general secretion pathway protein Cchromosome I CDS2779824 909 - 0.386139
NA VFA0144 HvnB; halovibrinchromosome II CDS162204 939 - 0.396166
NA VF1853 flagellar hook-basal body complex protein FliEchromosome I CDS2089445 312 - 0.413462
NA VFA0076 MshPchromosome II CDS83795 435 - 0.406897
NA VF0571 pili retraction protein PilTchromosome I CDS625442 516 - 0.344961
NA VF0468 lipoprotein signal peptidasechromosome I CDS501698 516 + 0.389535
NA VF0519 secretory protein containing TPR-repeats, similar to TadDchromosome I CDS555620 741 + 0.34143
NA VF2422 protein translocase subunit SecEchromosome I CDS2714813 378 - 0.388889
NA VFA0226 secretory protein containing TPR-repeats, similar to TadDchromosome II CDS250420 744 + 0.307796
NA VF1848 flagellar FliJ proteinchromosome I CDS2083975 444 - 0.385135
NA VF2470 general secretion pathway protein Hchromosome I CDS2773911 597 - 0.430486
NA VF0515 ATPases involved in chromosome partitioningchromosome I CDS551304 1239 + 0.36481
NA VF1966 protein translocase subunit SecFchromosome I CDS2202857 951 - 0.401682
NA VF0572 pili subunit PilA1chromosome I CDS626055 438 + 0.328767
NA VFA0222 ATPases involved in chromosome partitioningchromosome II CDS246123 1218 + 0.338259
NA VFA0778 TolQ proteinchromosome II CDS871683 534 - 0.413858
NA VF2469 general secretion pathway protein Ichromosome I CDS2773544 378 - 0.396825
NA VF2453 cell division protein FtsYchromosome I CDS2760056 1239 - 0.403551
NA VF2468 general secretion pathway protein Jchromosome I CDS2772877 681 - 0.378855
NA VF2188 type 4 prepilin peptidasechromosome I CDS2466917 888 + 0.396396
NA VF1840 flagellar biosynthetic protein FliRchromosome I CDS2078184 783 - 0.409962
NA VF2295 pili assembly protein PilOchromosome I CDS2584877 579 - 0.381693
NA VF0874 protein translocase subunit SecFchromosome I CDS958898 900 - 0.435556
NA VF0548 signal recognition particle, subunit FFH/SRP54chromosome I CDS597322 1374 + 0.401747
NA VF2471 general secretion pathway protein Gchromosome I CDS2774530 453 - 0.426049
NA VF2193 protein translocase subunit SecAchromosome I CDS2469955 2724 - 0.401248
NA VFA0867 TcpE, toxin co-regulated pilus biosynthesis proteinchromosome II CDS980908 1047 - 0.288443
NA VFA0894 putative surface proteinchromosome II CDS1014502 1797 + 0.390651
NA VF1844 flagellar motor switch protein FliNchromosome I CDS2080549 390 - 0.410256
NA VFA0592 type I secretion outer membrane proteinchromosome II CDS676228 1359 - 0.382634
NA VFA0875 TcpA, toxin co-regulated pilin precursorchromosome II CDS988427 627 - 0.373206
NA VF0360 general secretion pathway protein Achromosome I CDS392633 849 + 0.38987
NA VF0513 general secretion pathway protein Dchromosome I CDS549477 1311 + 0.394355
NA VFA0223 putative type IV secretion NTPase similar to TadAchromosome II CDS247343 1287 + 0.390831
NA VF0518 bipartite nuclear localization signal containing protein, similar to TadCchromosome I CDS554755 873 + 0.355097
NA VF1697 latent nuclear antigenchromosome I CDS1912411 4122 - 0.387676