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2024-05-19 16:51:30

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043

Number of genes found: 137

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Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA ECA1385 putative exported proteinSubName: Full=Putative exported protein; chromosome CDS1568546 1260 - 0.557143
NA ECA1099 large repetitive proteinSubName: Full=Large repetitive protein; chromosome CDS1231301 10848 - 0.560103
NA ECA1098 putative type I secretion proteinSubName: Full=Putative type I secretion protein; chromosome CDS1229354 1443 - 0.568954
NA ECA1270 putative biopolymer transport proteinSubName: Full=Putative biopolymer transport protein; chromosome CDS1444792 423 - 0.51773
NA ECA0788 putative exported proteinSubName: Full=Putative exported protein; chromosome CDS861960 945 + 0.555556
NA ECA0940 putative exported proteinSubName: Full=Putative exported protein; chromosome CDS1052967 1035 - 0.530435
NA ECA3395 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3808556 417 - 0.386091
NA ECA4445 putative membrane proteinRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS4986512 1635 + 0.51682
NA ECA3075 putative fimbrial chaperoneSubName: Full=Putative fimbrial chaperone; chromosome CDS3432149 774 + 0.527132
NA ECA1271 biopolymer transport proteinSubName: Full=Biopolymer transport protein; chromosome CDS1445229 777 - 0.567568
NA ECA0800 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS883680 1791 + 0.582915
NA ECA0573 putative plasmid-related proteinSubName: Full=Putative plasmid-related protein; chromosome CDS635349 2862 + 0.510482
NA ECA0941 putative fimbrial chaperoneSubName: Full=Putative fimbrial chaperone; chromosome CDS1054020 750 - 0.505333
NA ECA0942 putative outer membrane usher proteinSubName: Full=Putative outer membrane usher protein; chromosome CDS1054808 2493 - 0.519856
NA ECA3222 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3605517 738 - 0.501355
NA ECA4405 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4943487 1287 - 0.554779
NA ECA1195 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1356757 456 - 0.572368
NA ECA0794 putative type IV pilus proteinSubName: Full=Putative type IV pilus protein; chromosome CDS868800 960 + 0.585417
NA ECA0791 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS865144 1200 + 0.584167
NA ECA0798 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS872064 1632 + 0.55576
NA ECA3626 putative type II/IV secretion system proteinSubName: Full=Putative type II/IV secretion system protein; chromosome CDS4075862 1017 - 0.559489
NA ECA2128 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2430108 1008 + 0.58631
NA ECA3076 putative fimbrial usher proteinSubName: Full=Putative fimbrial usher protein; chromosome CDS3432966 2382 + 0.538623
NA ECA0943 fimbriae major subunit proteinSubName: Full=Fimbriae major subunit protein; chromosome CDS1057442 549 - 0.460838
NA ECA1656 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1905154 276 + 0.496377
NA ECA0793 putative type IV pilus proteinSubName: Full=Putative type IV pilus protein; chromosome CDS867805 981 + 0.556575
NA ECA1100 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1242166 3771 - 0.549456
NA ECA0789 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS862985 1437 + 0.558803
NA ECA2932 putative outer membrane efflux lipoproteinSubName: Full=Putative outer membrane efflux lipoprotein; chromosome CDS3276884 1473 + 0.567549
NA ECA0658 putative exported proteinSubName: Full=Putative exported protein; chromosome CDS731959 489 + 0.498978
NA ECA4298 putative biopolymer transport proteinSubName: Full=Putative biopolymer transport protein; chromosome CDS4814072 402 - 0.544776
NA ECA0939 putative fimbrial proteinSubName: Full=Putative fimbrial protein; chromosome CDS1052370 570 - 0.492982
NA ECA3266 putative hemagglutinin/hemolysin-related proteinSubName: Full=Putative hemagglutinin/hemolysin-related protein; chromosome CDS3656910 13677 - 0.561454
NA ECA0396 putative haemolysin-like proteinSubName: Full=Putative haemolysin-like protein; chromosome CDS453261 1701 + 0.507937
NA ECA0929 biopolymer transport proteinSubName: Full=Biopolymer transport protein; chromosome CDS1038716 402 - 0.519901
NA ECA0787 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS861360 552 + 0.539855
NA ECA0641 putative exported proteinRecName: Full=Modulator protein MzrA; chromosome CDS711151 396 - 0.507576
NA ECA4098 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4566236 852 - 0.537559
NA ECA0799 putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome CDS873754 9687 + 0.552906
NA ECA1667 putative type IV pilin protein precursorSubName: Full=Putative type IV pilin protein; chromosome CDS1915724 558 + 0.342294
NA ECA0792 putative type IV pilus proteinSubName: Full=Putative type IV pilus protein; chromosome CDS866383 1404 + 0.565527
NA ECA1668 putative type IV prepilinSubName: Full=Putative type IV prepilin; chromosome CDS1916388 1593 + 0.453861
NA ECA0926 putative biopolymer transport proteinSubName: Full=Putative biopolymer transport protein; chromosome CDS1034710 669 - 0.559043
NA ECA1121 putative membrane subunit of preprotein translocaseSubName: Full=Putative membrane subunit of preprotein translocase; chromosome CDS1274175 333 + 0.489489
NA ECA3703 conserved hypothetical phage-related proteinSubName: Full=Conserved hypothetical phage-related protein; chromosome CDS4147596 1152 - 0.529514
NA ECA4097 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS4565664 570 - 0.522807
NA ECA4299 putative biopolymer transport proteinSubName: Full=Putative biopolymer transport protein; chromosome CDS4814475 723 - 0.571231
NA ECA0391 putative activator or transporter protein of haemolysin-like proteinSubName: Full=Putative activator or transporter protein of haemolysin-like protein; chromosome CDS442927 1779 + 0.527825
NA ECA0425 putative outer membrane efflux proteinSubName: Full=Putative outer membrane efflux protein; chromosome CDS481914 1422 - 0.533755
NA ECA4157 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS4645142 594 + 0.525253
aggA ECA3267 agglutination proteinSubName: Full=Agglutination protein; chromosome CDS3670963 1353 + 0.498891
ccmD ECA1885 heme exporter protein DSubName: Full=Heme exporter protein D; chromosome CDS2140688 222 + 0.594595
clpP ECA1148 ATP-dependent Clp protease proteolytic subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1301367 624 + 0.472756
cpxP ECA4310 putative stress resistance proteinSubName: Full=Putative stress resistance protein; chromosome CDS4828523 525 - 0.508571
exbB ECA0358 biopolymer transport proteinSubName: Full=Biopolymer transport protein; chromosome CDS409087 915 + 0.583607
exbD ECA0359 biopolymer transport proteinSubName: Full=Biopolymer transport protein; chromosome CDS410005 426 + 0.523474
ffh ECA3360 signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS3774839 1362 - 0.506608
flgM ECA1700 negative regulator of flagellin synthesisSubName: Full=Negative regulator of flagellin synthesis; chromosome CDS1949704 297 - 0.451178
flgN ECA1699 flagella synthesis proteinSubName: Full=Flagella synthesis protein; chromosome CDS1949261 438 - 0.456621
flhA ECA1697 flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; chromosome CDS1946687 2085 + 0.48777
flhB ECA1696 flagellar biosynthetic proteinSubName: Full=Flagellar biosynthetic protein; chromosome CDS1945543 1152 + 0.469618
fliE ECA1727 flagellar hook-basal body complex proteinRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS1972671 315 + 0.48254
fliF ECA1726 flagellar M-ring proteinRecName: Full=Flagellar M-ring protein; chromosome CDS1970686 1725 - 0.510145
fliH ECA1724 flagellar assembly proteinSubName: Full=Flagellar assembly protein; chromosome CDS1968982 723 - 0.522822
fliI ECA1723 flagellum-specific ATP synthaseSubName: Full=Flagellum-specific ATP synthase; EC=3.6.3.14; chromosome CDS1967612 1374 - 0.516012
fliJ ECA1722 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS1967157 447 - 0.46085
fliN ECA1718 flagellar motor switch protein flinSubName: Full=Flagellar motor switch protein flin; chromosome CDS1963802 414 - 0.492754
fliP ECA1716 flagellar biosynthetic proteinSubName: Full=Flagellar biosynthetic protein; chromosome CDS1962607 777 - 0.481338
fliQ ECA1715 flagellar biosynthetic proteinSubName: Full=Flagellar biosynthetic protein; chromosome CDS1962317 270 - 0.485185
fliR ECA1714 flagellar biosynthetic proteinRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS1961529 786 - 0.458015
fliS ECA1729 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS1973615 411 - 0.486618
ftsY ECA4346 cell division proteinRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS4868002 1410 - 0.534043
hasF ECA1534 outer membrane secretion proteinSubName: Full=Outer membrane secretion protein; chromosome CDS1783707 1371 - 0.574763
hecA1 ECA2117 hemolysin/hemagglutinin-like proteinSubName: Full=Hemolysin/hemagglutinin-like protein; chromosome CDS2408181 3405 + 0.577974
hecA2 ECA2118 hemolysin/hemagglutinin-like protein HecA precursorSubName: Full=Hemolysin/hemagglutinin-like protein HecA; chromosome CDS2411693 14811 + 0.553102
hecB ECA2116 putative hemolysin activator proteinSubName: Full=Putative hemolysin activator protein; chromosome CDS2406458 1674 + 0.502389
hofB ECA3799 protein transport proteinSubName: Full=Protein transport protein; chromosome CDS4246629 1473 + 0.545825
hofC ECA3800 protein transport proteinSubName: Full=Protein transport protein; chromosome CDS4248098 1206 + 0.515755
hofQ ECA4094 putative type II secretion system proteinSubName: Full=Putative type II secretion system protein; chromosome CDS4563346 1182 - 0.514382
hrcC ECA2100 type III secretion proteinSubName: Full=Type III secretion protein; chromosome CDS2386393 2070 + 0.578261
hrcJ ECA2095 type III secretion proteinSubName: Full=Type III secretion protein; chromosome CDS2383611 768 + 0.563802
hrcN ECA2083 type III secretion proteinSubName: Full=Type III secretion protein; chromosome CDS2370621 1371 - 0.615609
hrcQ ECA2080 type III secretion proteinSubName: Full=Type III secretion protein; chromosome CDS2368462 1218 - 0.582102
hrcR ECA2079 type III secretion proteinSubName: Full=Type III secretion protein; chromosome CDS2367812 654 - 0.550459
hrcS ECA2078 type III secretion proteinSubName: Full=Type III secretion protein; chromosome CDS2367544 261 - 0.544061
hrcT ECA2077 type III secretion proteinSubName: Full=Type III secretion protein; chromosome CDS2366737 801 - 0.549313
hrcU ECA2076 type III secretion proteinSubName: Full=Type III secretion protein; chromosome CDS2365644 1080 - 0.565741
hrpI ECA2085 type III secretion proteinSubName: Full=Type III secretion protein; chromosome CDS2372933 2103 - 0.566334
lepB ECA3279 signal peptidase IRecName: Full=Signal peptidase I; EC=3.4.21.89; chromosome CDS3683661 966 - 0.506211
lspA ECA3875 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS4334856 513 - 0.510721
marC ECA3373 multiple antibiotic resistance proteinSubName: Full=Multiple antibiotic resistance protein; chromosome CDS3788942 675 + 0.49037
ogl ECA2426 oligogalacturonate lyaseRecName: Full=Oligogalacturonide lyase; EC=4.2.2.6; chromosome CDS2738982 1167 - 0.488432
oprJ ECA3446 multidrug resistance outer membrane proteinSubName: Full=Multidrug resistance outer membrane protein; chromosome CDS3865039 1404 - 0.514957
outC ECA3110 general secretion pathway protein CSubName: Full=General secretion pathway protein C; chromosome CDS3470224 864 - 0.515046
outD ECA3109 general secretion pathway protein DSubName: Full=General secretion pathway protein D; chromosome CDS3468183 1953 - 0.523297
outE ECA3108 general secretion pathway protein ESubName: Full=General secretion pathway protein E; chromosome CDS3466690 1497 - 0.554442
outF ECA3107 general secretion pathway protein FSubName: Full=General secretion pathway protein F; chromosome CDS3465462 1227 - 0.551752
outG ECA3106 general secretion pathway protein GSubName: Full=General secretion pathway protein G; chromosome CDS3464954 441 - 0.521542
outH ECA3105 general secretion pathway protein HSubName: Full=General secretion pathway protein H; chromosome CDS3464313 567 - 0.537919
outI ECA3104 general secretion pathway protein ISubName: Full=General secretion pathway protein I; chromosome CDS3463951 366 - 0.557377
outJ ECA3103 general secretion pathway protein JSubName: Full=General secretion pathway protein J; chromosome CDS3463301 651 - 0.516129
outK ECA3102 general secretion pathway protein KRecName: Full=Type II secretion system protein K; chromosome CDS3462318 987 - 0.521783
outL ECA3101 general secretion pathway protein LRecName: Full=Type II secretion system protein L; Short=T2SS protein L; chromosome CDS3461044 1278 - 0.551643
outM ECA3100 general secretion pathway protein MRecName: Full=Type II secretion system protein M; Short=T2SS protein M; AltName: Full=General secretion pathway protein M; chromosome CDS3460553 495 - 0.543434
outN ECA3099 general secretion pathway protein NSubName: Full=General secretion pathway protein N; chromosome CDS3459817 747 - 0.552878
outO ECA3098 type 4 prepilin-like proteins leader peptide processing enzymeRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS3458845 849 - 0.551237
pelI ECA1094 pectate lyaseSubName: Full=Pectate lyase; chromosome CDS1222651 1044 - 0.477012
pilN ECA0534 putative Type IV pilus proteinSubName: Full=Putative Type IV pilus protein; chromosome CDS606013 1665 + 0.518318
pilQ ECA0538 putative Type IV pilus nucleotide-binding proteinSubName: Full=Putative Type IV pilus nucleotide-binding protein; chromosome CDS609487 1560 + 0.553205
pilU ECA0543 putative prepilin peptidaseSubName: Full=Putative prepilin peptidase; chromosome CDS613398 660 + 0.530303
ppdB ECA0990 prepilin peptidase dependent protein B precursorSubName: Full=Prepilin peptidase dependent protein B; chromosome CDS1101908 612 + 0.529412
ppdD ECA3798 prepilin peptidase dependent protein DSubName: Full=Prepilin peptidase dependent protein D; chromosome CDS4246180 447 + 0.530201
prtF ECA2781 protease secretion proteinSubName: Full=Protease secretion protein; chromosome CDS3118174 1347 - 0.552339
secA ECA3806 preprotein translocase SecA subunitRecName: Full=Protein translocase subunit SecA; chromosome CDS4252890 2703 - 0.502405
secB ECA0172 protein-export proteinRecName: Full=Protein-export protein SecB; chromosome CDS192299 477 + 0.522013
secD ECA1122 protein-export membrane proteiRecName: Full=Protein translocase subunit SecD; chromosome CDS1274535 1848 + 0.515693
secE ECA0217 preprotein translocase SecE subunitRecName: Full=Protein translocase subunit SecE; chromosome CDS251779 384 + 0.520833
secF ECA1123 protein-export membrane proteinRecName: Full=Protein-export membrane protein SecF; chromosome CDS1276393 969 + 0.493292
secG ECA0702 protein-export membrane proteinSubName: Full=Protein-export membrane protein; chromosome CDS772670 333 + 0.504505
secY ECA4011 preprotein translocase subunitRecName: Full=Protein translocase subunit SecY; chromosome CDS4490834 1332 - 0.457207
smf ECA3998 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4481200 1122 - 0.509804
sohB ECA2288 proteaseSubName: Full=Protease; EC=3.4.21.-; chromosome CDS2593787 1053 - 0.519468
sppA ECA2339 protease IVRecName: Full=Protease 4; EC=3.4.21.-; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase; chromosome CDS2649493 1851 + 0.517018
tatA ECA0199 sec-independent protein translocaseRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS226078 261 + 0.48659
tatB ECA0200 sec-independent protein translocaseRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS226342 594 + 0.518519
tatC ECA0201 sec-independent protein translocase proteinRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS226939 756 + 0.511905
tatE ECA1296 Sec-independent protein translocase proteinRecName: Full=Probable Sec-independent protein translocase protein TatE; chromosome CDS1469182 198 + 0.489899
tolB ECA1373 TolB proteinRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS1553863 1293 + 0.532096
tolC ECA0330 outer membrane proteinSubName: Full=Outer membrane protein; chromosome CDS377889 1401 - 0.523198
tolQ ECA1370 TolQ proteinSubName: Full=TolQ protein; chromosome CDS1551348 687 + 0.496361
tolR ECA1371 tolR proteinSubName: Full=TolR protein; chromosome CDS1552047 426 + 0.502347
virB10 ECA1614 putative conjugal transfer proteinSubName: Full=Putative conjugal transfer protein; chromosome CDS1868881 1320 - 0.619697
virB11 ECA1613 putative conjugal transfer proteinSubName: Full=Putative conjugal transfer protein; chromosome CDS1867875 1017 - 0.515241
virB4 ECA1620 putative conjugal transfer proteinSubName: Full=Putative conjugal transfer protein; chromosome CDS1874142 2748 - 0.566594
virB6 ECA1617 putative conjugal transfer proteinSubName: Full=Putative conjugal transfer protein; chromosome CDS1871989 1041 - 0.53122
virB8 ECA1616 putative conjugal transfer proteinSubName: Full=Putative conjugal transfer protein; chromosome CDS1871087 684 - 0.527778
virB9 ECA1615 putative conjugal transfer proteinSubName: Full=Putative conjugal transfer protein; chromosome CDS1870197 894 - 0.607383