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2024-05-06 18:01:49

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Burkholderia pseudomallei K96243, K96243

Number of genes found: 186

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Burkholderia pseudomallei K96243, K96243
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BPSL2870 putative membrane proteinchromosome 1 CDS3435044 327 + 0.608563
NA BPSS1936 putative outer membrane efflux proteinchromosome 2 CDS2618540 1527 + 0.719057
NA BPSL1815 putative fimbriae assembly-related proteinchromosome 1 CDS2162248 1575 - 0.711111
NA BPSS1621 putative type III secretion proteinchromosome 2 CDS2196386 1083 - 0.693444
NA BPSS1592 putative type III secretion system proteinchromosome 2 CDS2165625 1806 - 0.689922
NA BPSL1913 putative exported proteinchromosome 1 CDS2279266 1497 + 0.702071
NA BPSL3170 putative secretion system proteinchromosome 1 CDS3774618 1329 - 0.699774
NA BPSS1439 putative membrane-anchored cell surface proteinchromosome 2 CDS1960277 4593 + 0.647289
NA BPSL1799 putative fimbrial chaperonechromosome 1 CDS2140378 750 - 0.705333
NA BPSS0120 putative fimbrial usher proteinchromosome 2 CDS153167 2385 - 0.606709
NA BPSL1705 putative membrane proteinchromosome 1 CDS1982643 4821 + 0.633686
NA BPSS1434 putative membrane-anchored cell surface proteinchromosome 2 CDS1948688 7905 + 0.659709
NA BPSS1627 putative type III secretion proteinchromosome 2 CDS2200938 1329 + 0.718585
NA BPSL1893 putative type II/IV secretion system ATP-binding proteinchromosome 1 CDS2254426 1344 - 0.676339
NA BPSS1287 putative outer membrane efflux proteinchromosome 2 CDS1758557 1341 + 0.672632
NA BPSL1631 putative outer membrane proteinchromosome 1 CDS1889771 3375 + 0.66963
NA BPSL1626 putative fimbrial subunit type 1 precursorchromosome 1 CDS1883679 531 + 0.636535
NA BPSS1626 putative type III secretion proteinchromosome 2 CDS2200225 717 + 0.743375
NA BPSL1898 family A24A unassigned peptidasechromosome 1 CDS2259910 501 - 0.666667
NA BPSS2194 putative membrane proteinchromosome 2 CDS2961136 462 + 0.701299
NA BPSL2997 MarC family integral membrane proteinchromosome 1 CDS3573296 603 - 0.66335
NA BPSL1813 putative fimbriae-related membrane proteinchromosome 1 CDS2160315 945 - 0.725926
NA BPSS2185 putative pilus subunit proteinchromosome 2 CDS2953340 171 + 0.573099
NA BPSS0455 putative copper resistance-related lipoproteinchromosome 2 CDS621586 1665 + 0.715315
NA BPSL1007 putative fimbriae usher proteinchromosome 1 CDS1171461 2301 - 0.717949
NA BPSS2187 putative pilus assembly-related outer membrane proteinchromosome 2 CDS2953927 540 + 0.748148
NA BPSS0663 putative exported proteinchromosome 2 CDS897761 396 + 0.550505
NA BPSS1629 putative type III secretion proteinchromosome 2 CDS2202787 1032 + 0.66376
NA BPSL1801 putative type-1 fimbrial proteinchromosome 1 CDS2143834 513 - 0.672515
NA BPSL1660 putative outer membrane proteinchromosome 1 CDS1923238 1800 + 0.640556
NA BPSL0784 putative exported proteinchromosome 1 CDS912788 474 + 0.672996
NA BPSL3008 putative type IV pilus assembly proteinchromosome 1 CDS3584982 1260 + 0.719841
NA BPSL1892 putative fimbriae-related outer membrane proteinchromosome 1 CDS2253426 1008 - 0.731151
NA BPSL1972 putative antibiotic resistance membrane proteinchromosome 1 CDS2347021 1953 + 0.735279
NA BPSL3347 putative bacteriophage-related lipoproteinchromosome 1 CDS3969661 1377 - 0.610748
NA BPSS0092 putative fimbria-related chaperonechromosome 2 CDS110792 738 + 0.602981
NA BPSL0120 SMF family proteinchromosome 1 CDS135094 1191 - 0.745592
NA BPSS1492 hypothetical proteinchromosome 2 CDS2033784 1551 + 0.698259
NA BPSL2063 putative membrane proteinchromosome 1 CDS2467978 3273 - 0.695692
NA BPSS2197 putative membrane proteinchromosome 2 CDS2964244 978 + 0.676892
NA BPSL1628 putative fimbrial usher proteinchromosome 1 CDS1885085 2553 + 0.667842
NA BPSL1903 putative exported heme utilisation related proteinchromosome 1 CDS2264383 1680 + 0.6625
NA BPSS0122 putative exported proteinchromosome 2 CDS157098 648 - 0.473765
NA BPSL0267 putative flagella synthesis proteinchromosome 1 CDS279820 441 - 0.689342
NA BPSS2053 putative cell surface proteinchromosome 2 CDS2770766 9312 - 0.638316
NA BPSL1811 putative membrane proteinchromosome 1 CDS2158781 429 - 0.67366
NA BPSS0088 putative exported proteinchromosome 2 CDS105290 1938 + 0.676987
NA BPSL1814 putative membrane proteinchromosome 1 CDS2161256 996 - 0.73494
NA BPSS2190 putative outer membrane proteinchromosome 2 CDS2956893 2073 + 0.748191
NA BPSL2940 putative transport-related membrane proteinchromosome 1 CDS3511619 708 - 0.741525
NA BPSS1649 putative sugar-binding proteinchromosome 2 CDS2266833 2421 + 0.669558
NA BPSL2448 family S49 unassigned peptidasechromosome 1 CDS2951945 1002 - 0.681637
NA BPSS2189 putative pilus assembly-related, exported proteinchromosome 2 CDS2955934 846 + 0.716312
NA BPSL1819 putative fimbriae-assembly related proteinchromosome 1 CDS2166995 1053 - 0.773029
NA BPSS0294 putative multidrug efflux system lipoproteinchromosome 2 CDS395439 1533 + 0.716243
NA BPSS1703 putative membrane proteinchromosome 2 CDS2337384 1317 - 0.784358
NA BPSS1929 putative outer membrane lipoproteinchromosome 2 CDS2612032 1485 - 0.744108
NA BPSL1891 putative outer-membrane proteinchromosome 1 CDS2252404 1026 - 0.732943
NA BPSS0540 outer membrane efflux proteinchromosome 2 CDS736025 1584 + 0.751263
NA BPSL3263 putative plasmid conjugal transfer proteinchromosome 1 CDS3879171 780 - 0.584615
NA BPSL1896 putative membrane fimbriae assembly proteinchromosome 1 CDS2258467 900 - 0.743333
NA BPSL1895 putative exported fimbriae assembly proteinchromosome 1 CDS2257078 1326 - 0.698341
NA BPSL1897 putative membrane proteinchromosome 1 CDS2259446 468 - 0.673077
NA BPSL0782 putative type 4 fimbrial pilin proteinchromosome 1 CDS909649 519 + 0.72447
NA BPSS1550 Type III secretion system proteinchromosome 2 CDS2103636 948 + 0.712025
NA BPSL2456 putative membrane proteinchromosome 1 CDS2962365 288 + 0.611111
NA BPSL0019 outer membrane efflux lipoproteinchromosome 1 CDS20480 1656 - 0.74215
NA BPSS1624 putative type III secretion proteinchromosome 2 CDS2198712 855 + 0.722807
NA BPSS0623 outer membrane efflux proteinchromosome 2 CDS849810 1383 - 0.724512
NA BPSL1894 putative fimbriae assembly proteinchromosome 1 CDS2255773 1239 - 0.724778
NA BPSL1629 putative exported fimbria-related proteinchromosome 1 CDS1887634 966 + 0.660455
NA BPSS0366 putative biopolymer transport proteinchromosome 2 CDS506662 423 - 0.63357
NA BPSS0908 putative surface-exposed proteinchromosome 2 CDS1200501 2316 + 0.707686
NA BPSL1800 putative outer membrane usher protein precursorchromosome 1 CDS2141243 2469 - 0.697448
NA BPSS1702 hypothetical proteinchromosome 2 CDS2336094 1134 - 0.743386
NA BPSL2028 putative fimbriae-assembly chaperonechromosome 1 CDS2423980 840 - 0.721429
NA BPSL1818 putative fimbriae assembly-related proteinchromosome 1 CDS2165512 1320 - 0.70303
NA BPSL1566 putative outer membrane lipoproteinchromosome 1 CDS1817818 1905 - 0.745407
NA BPSS1017 putative antibiotic resistance proteinchromosome 2 CDS1390598 789 + 0.685678
NA BPSS1617 putative type III secretion proteinchromosome 2 CDS2191756 651 - 0.646697
NA BPSS1348 putative outer membrane efflux proteinchromosome 2 CDS1840349 1584 - 0.750631
NA BPSS0229 putative exported proteinchromosome 2 CDS312200 1662 - 0.687124
NA BPSS0109 putative exported proteinchromosome 2 CDS136345 1029 - 0.58309
NA BPSL1627 putative fimbrial assembly chaperone precursorchromosome 1 CDS1884308 771 + 0.645914
NA BPSL0514 putative cell division proteinchromosome 1 CDS568161 1320 - 0.708333
NA BPSS1120 putative outer membrane efflux proteinchromosome 2 CDS1504124 1539 + 0.717349
NA BPSS0093 outer membrane usher proteinchromosome 2 CDS111753 2634 + 0.64161
NA BPSL2756 putative exported proteinchromosome 1 CDS3295677 561 - 0.723708
NA BPSS2198 putative membrane proteinchromosome 2 CDS2965276 960 + 0.7
NA BPSS2196 putative type II/IV secretion system-related proteinchromosome 2 CDS2962850 1368 + 0.671784
NA BPSL3094 putative outer membrane bacteriocin efflux proteinchromosome 1 CDS3693290 1449 + 0.689441
NA BPSS1727 putative hemagglutinin related proteinchromosome 2 CDS2368050 2727 - 0.682435
NA BPSL2027 putative fimbriae-related proteinchromosome 1 CDS2421524 2349 - 0.710089
NA BPSS0121 putative fimbrial chaperonechromosome 2 CDS155912 711 - 0.547117
NA BPSL1802 multidrug efflux system putative membrane lipoproteinchromosome 1 CDS2146271 1551 - 0.74597
NA BPSS1409 hypothetical proteinchromosome 2 CDS1922315 288 + 0.586806
NA BPSL3262 putative plasmid conjugal transfer proteinchromosome 1 CDS3877520 1431 - 0.589797
NA BPSS2193 putative membrane proteinchromosome 2 CDS2960597 543 + 0.677716
NA BPSS0367 putative bipolymer transport proteinchromosome 2 CDS507104 729 - 0.659808
NA BPSS1616 putative type III secretion proteinchromosome 2 CDS2191452 264 - 0.662879
NA BPSL2939 putative transport-related membrane proteinchromosome 1 CDS3511066 513 - 0.736842
NA BPSL3136 putative membrane proteinchromosome 1 CDS3737300 621 - 0.644122
NA BPSL1661 putative hemolysin-related proteinchromosome 1 CDS1925148 9690 + 0.652012
NA BPSS0091 putative fimbrial proteinchromosome 2 CDS110182 546 + 0.57326
NA BPSL1008 putative exported fimbriae-related chaperonechromosome 1 CDS1174516 711 - 0.731364
NA BPSL0078 putative membrane proteinchromosome 1 CDS88374 1677 + 0.641622
NA BPSL2752 putative fimbrial protein precursorchromosome 1 CDS3293420 453 - 0.675497
NA BPSL1890 putative lipoproteinchromosome 1 CDS2251432 966 - 0.738095
NA BPSL0268 putative negative regulator of flagellin synthesischromosome 1 CDS280340 345 - 0.715942
NA BPSS0079 conserved hypothetical proteinchromosome 2 CDS91706 2241 + 0.631861
NA BPSS1728 putative secretion/activator proteinchromosome 2 CDS2370877 1692 - 0.637707
NA BPSS0796 putative surface-exposed proteinchromosome 2 CDS1063333 4962 + 0.680572
NA BPSL1233 putative lipoproteinchromosome 1 CDS1416651 1263 + 0.692003
NA BPSS1603 putative secretion proteinchromosome 2 CDS2178792 1806 - 0.786822
NA BPSS0094 putative fimbria subunit proteinchromosome 2 CDS114379 573 + 0.623037
NA BPSS2052 putative activator/secretion proteinchromosome 2 CDS2768149 1770 - 0.622034
NA BPSS1618 putative type III secretion proteinchromosome 2 CDS2192393 1287 - 0.765346
NA BPSS1620 putative type III secretion proteinchromosome 2 CDS2194317 2073 - 0.691751
NA BPSL2022 putative drug-resistance related outer-membrane proteinchromosome 1 CDS2415534 1581 + 0.746996
NA BPSL0106 putative exported proteinchromosome 1 CDS117179 570 - 0.664912
bsaO BPSS1545 Type III secretion system proteinchromosome 2 CDS2098689 1863 - 0.70263
bsaQ BPSS1543 Type III secretion system proteinchromosome 2 CDS2095478 2073 - 0.664737
bsaS BPSS1541 surface presentation of antigens proteinchromosome 2 CDS2093755 1308 - 0.727829
bsaV BPSS1538 surface presentation of antigens proteinchromosome 2 CDS2091071 972 - 0.743827
bsaW BPSS1537 surface presentation of antigens proteinchromosome 2 CDS2090401 681 - 0.631424
bsaX BPSS1536 surface presentation of antigens proteinchromosome 2 CDS2090110 255 - 0.658824
bsaY BPSS1535 surface presentation of antigens proteinchromosome 2 CDS2089321 756 - 0.68254
bsaZ BPSS1534 surface presentation of antigens proteinchromosome 2 CDS2088082 1236 - 0.686084
clpP BPSL1403 ATP-dependent Clp protease proteolytic subunitchromosome 1 CDS1631727 654 + 0.639144
czcC BPSS1043 putative cobalt-zinc-cadmium resistance proteinchromosome 2 CDS1421864 1359 - 0.746137
ffh BPSL2995 signal recognition particle proteinchromosome 1 CDS3571089 1368 + 0.668129
flhA BPSL3294 flagellar biosynthesis protein FlhAchromosome 1 CDS3911356 2103 - 0.670471
flhB BPSL3295 flagellar biosynthetic protein FlhBchromosome 1 CDS3913455 1218 - 0.690476
fliE BPSL0231 flagellar hook-basal body complex proteinchromosome 1 CDS242591 342 + 0.652047
fliF BPSL0230 flagellar M-ring proteinchromosome 1 CDS240547 1797 - 0.698386
fliH BPSL0228 flagellar assembly proteinchromosome 1 CDS238889 681 - 0.737151
fliI BPSL0227 flagellum-specific ATP synthasechromosome 1 CDS237324 1572 - 0.725827
fliJ BPSL0226 flagellar fliJ proteinchromosome 1 CDS236866 453 - 0.719647
fliN BPSL0028 probable flagellar motor switch proteinchromosome 1 CDS29761 498 + 0.680723
fliP BPSL0030 flagellar biosynthetic proteinchromosome 1 CDS30991 762 + 0.660105
fliQ BPSL0031 flagellar biosynthetic proteinchromosome 1 CDS31778 273 + 0.677656
fliR BPSL0032 flagellar biosynthetic proteinchromosome 1 CDS32169 783 + 0.676884
fliS BPSL0232 flagellar proteinchromosome 1 CDS243065 435 + 0.666667
gspD BPSL0007 general secretory pathway protein Dchromosome 1 CDS8395 2274 + 0.667986
gspE BPSL0008 general secretory pathway protein Echromosome 1 CDS10665 1494 + 0.696118
gspF BPSL0009 general secretory pathway protein Fchromosome 1 CDS12163 1218 + 0.688834
gspG BPSL0011 general secretory pathway protein Gchromosome 1 CDS14010 453 + 0.624724
gspH BPSL0012 general secretory pathway protein Hchromosome 1 CDS14617 480 + 0.727083
gspI BPSL0013 general secretory pathway protein Ichromosome 1 CDS15099 405 + 0.720988
gspJ BPSL0014 general secretory pathway protein Jchromosome 1 CDS15481 729 + 0.720165
gspK BPSL0015 general secretory pathway protein Kchromosome 1 CDS16391 1071 + 0.693744
gspL BPSL0016 general secretory pathway protein Lchromosome 1 CDS17486 1431 + 0.733054
gspM BPSL0017 general secretory pathway protein Mchromosome 1 CDS18913 507 + 0.710059
gspO BPSL3010 type IV prepilin leader peptide type M1chromosome 1 CDS3587485 930 + 0.705376
lepB BPSL2430 signal peptidase Ichromosome 1 CDS2935919 894 - 0.619687
lspA BPSL0905 signal peptidase IIchromosome 1 CDS1055825 501 - 0.662675
oprB BPSL0816 outer membrane efflux proteinchromosome 1 CDS947371 1545 + 0.713269
oprM BPSS0734 outer membrane efflux proteinchromosome 2 CDS985782 1860 - 0.708602
pilC BPSL3009 type IV pilus assembly protein PilCchromosome 1 CDS3586238 1218 + 0.724138
pilN BPSS1600 putative type IV pilus biosynthesis proteinchromosome 2 CDS2174832 1770 - 0.715254
pilQ BPSS1597 putative type IV pilus biosynthesis proteinchromosome 2 CDS2171401 1611 - 0.712601
pilR BPSS1596 putative type IV pilus biosynthesis proteinchromosome 2 CDS2170335 1077 - 0.690808
pilT BPSS1602 twitching motility proteinchromosome 2 CDS2177487 1107 + 0.66486
sctC BPSS1390 putative type III secretion system proteinchromosome 2 CDS1903732 1767 - 0.621392
sctJ BPSS1397 putative type III secretion associated proteinchromosome 2 CDS1911490 825 - 0.625455
sctL BPSS1395 putative type III secretion-associated proteinchromosome 2 CDS1909854 870 - 0.658621
sctN BPSS1394 putative type III secretion associated proteinchromosome 2 CDS1908508 1350 - 0.665185
sctQ BPSS1403 putative type III secretion-associated proteinchromosome 2 CDS1917874 933 + 0.649518
sctR BPSS1404 putative type III secretion-associated proteinchromosome 2 CDS1918790 651 + 0.571429
sctS BPSS1405 putative type III secretion-associated proteinchromosome 2 CDS1919463 264 + 0.621212
sctT BPSS1392 putative type III secretion-associated proteinchromosome 2 CDS1907166 819 - 0.619048
sctU BPSS1400 putative type III secretion-associated proteinchromosome 2 CDS1913631 1059 + 0.628895
sctV BPSS1401 putative type III secretion-associated proteinchromosome 2 CDS1914705 2118 + 0.640227
secA BPSL3016 preprotein translocase SecA subunitchromosome 1 CDS3593040 2796 - 0.654149
secB BPSL0446 protein-export proteinchromosome 1 CDS485609 480 + 0.627083
secD BPSL2871 putative protein-export membrane proteinchromosome 1 CDS3435478 2025 + 0.686914
secE BPSL3227 preprotein translocase SecE subunitchromosome 1 CDS3827986 381 - 0.553806
secF BPSL2872 putative protein-export membrane proteinchromosome 1 CDS3437518 951 + 0.634069
secG BPSL1210 general secretory pathway, protein-export membrane proteinchromosome 1 CDS1396065 378 + 0.674603
secY BPSL3193 preprotein translocase SecY subunitchromosome 1 CDS3798254 1365 - 0.608059
tatA BPSL3128 Sec-independent protein translocase protein TatAchromosome 1 CDS3732947 234 - 0.615385
tatB BPSL3127 Sec-independent protein translocase protein TatBchromosome 1 CDS3732393 528 - 0.714015
tatC BPSL3126 Sec-independent protein translocase protein TatCchromosome 1 CDS3731572 783 - 0.634738
tolB BPSL2764 putative periplasmic TolB proteinchromosome 1 CDS3302378 1302 + 0.650538
tolQ BPSL2761 putative TolQ transport transmembrane proteinchromosome 1 CDS3300011 789 + 0.648923
tolR BPSL2762 putative TolR-related proteinchromosome 1 CDS3300810 450 + 0.66