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2024-05-07 03:35:42

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Rhodopseudomonas palustris CGA009, CGA009

Number of genes found: 107

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhodopseudomonas palustris CGA009, CGA009
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RPA0155 putative tolR/exbD proteinchromosome CDS174326 468 + 0.685897
NA RPA4538 conserved unknown proteinchromosome CDS5118975 777 - 0.666667
NA RPA2374 hypothetical proteinchromosome CDS2690837 207 + 0.647343
NA RPA0428 conserved hypothetical proteinchromosome CDS469771 519 - 0.628131
NA RPA1341 conserved hypothetical proteinchromosome CDS1475303 13008 + 0.699723
NA RPA3379 hypothetical proteinchromosome CDS3821212 195 - 0.646154
NA RPA3675 Flp/Fap pilin componentchromosome CDS4148391 165 + 0.593939
NA RPA1810 putative outer membrane proteinchromosome CDS2036488 1443 - 0.685378
NA RPA3674 conserved hypothetical proteinchromosome CDS4146950 534 - 0.567416
NA RPA1082 conserved hypothetical proteinchromosome CDS1190900 1335 + 0.580524
NA RPA3886 Flagellar hook-basal body complex protein FliEchromosome CDS4387018 306 - 0.653595
NA RPA4573 conserved unknown proteinchromosome CDS5154547 489 - 0.672802
NA RPA0773 hypothetical proteinchromosome CDS856721 459 - 0.529412
NA RPA3407 hypothetical proteinchromosome CDS3846441 579 - 0.651123
NA RPA4081 possible pilus assembly protein cpaBchromosome CDS4618593 813 - 0.642066
NA RPA0729 conserved hypothetical proteinchromosome CDS803190 579 + 0.597582
NA RPA3168 possible flgaellar switch protein FliNchromosome CDS3574819 243 - 0.580247
NA RPA0877 conserved hypothetical proteinchromosome CDS973678 450 + 0.7
NA RPA2718 hypothetical proteinchromosome CDS3089301 564 + 0.632979
NA RPA1826 conserved hypothetical proteinchromosome CDS2055690 1359 - 0.662252
NA RPA4122 Conjugal transfer protein TrbDchromosome CDS4666367 264 - 0.67803
NA RPA0154 possible MotA/TolQ/ExbB proton channel familychromosome CDS173675 639 + 0.687011
NA RPA0805 possible outer membrane proteinchromosome CDS892683 1350 - 0.654074
NA RPA1349 Hemolysin activation/secretion proteinchromosome CDS1494203 1755 + 0.638177
NA RPA0632 60 kDa inner membrane proteinchromosome CDS698337 1869 - 0.634564
NA RPA2400 conserved hypothetical proteinchromosome CDS2725671 471 + 0.605096
NA RPA0642 conserved hypothetical proteinchromosome CDS711258 393 + 0.6743
NA RPA3678 putative exporter protein, cpaCchromosome CDS4150110 1443 + 0.643105
NA RPA3683 conserved hypothetical proteinchromosome CDS4156039 975 + 0.61641
NA RPA3677 conserved hypothetical proteinchromosome CDS4149514 582 + 0.664948
NA RPA4120 possible conjugal transfer protein trbJchromosome CDS4663182 738 - 0.639566
NA RPA1337 conserved hypothetical proteinchromosome CDS1469449 2256 + 0.677305
NA RPA4113 putative conjugal transfer protein trbBchromosome CDS4656317 882 + 0.641723
NA RPA3681 secretory protein kinase, cpaFchromosome CDS4153661 1383 + 0.630513
NA RPA2236 conserved hypothetical proteinchromosome CDS2533709 1755 - 0.644444
NA RPA2581 putative outer membrane proteinchromosome CDS2934830 1557 + 0.660244
NA RPA2572 possible outer membrane efflux protein.chromosome CDS2919954 1449 + 0.668737
NA RPA2373 possible outer membrane proteinchromosome CDS2689314 1530 + 0.692157
NA RPA3329 conserved hypothetical proteinchromosome CDS3756423 1752 - 0.65468
NA RPA4118 conjugal transfer protein trbLchromosome CDS4661500 1296 - 0.658951
NA RPA2054 possible outer membrane protein precursor CzcCchromosome CDS2313105 1272 + 0.681604
NA RPA1043 possible protease SohBchromosome CDS1146377 903 + 0.664452
NA RPA1882 Flp/Fap pilin componentchromosome CDS2114160 192 + 0.619792
NA RPA1266 possible FlbE proteinchromosome CDS1388029 627 + 0.673046
NA RPA1336 conserved hypothetical proteinchromosome CDS1459664 9891 + 0.67435
NA RPA0905 Flp/Fap pilin componentchromosome CDS1007654 174 - 0.591954
NA RPA0730 conserved hypothetical proteinchromosome CDS803781 690 + 0.584058
NA RPA3682 conserved unknown proteinchromosome CDS4155056 975 + 0.607179
DprA RPA3120 DNA processing chain Achromosome CDS3525318 1143 + 0.706037
TolB RPA1120 putative tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicinschromosome CDS1221477 1335 + 0.653933
TolQ RPA1117 TolQ protein, inner membrane protein, tolerance to group A colicinschromosome CDS1219157 711 + 0.637131
TolR RPA1118 putative tolR protein, uptake of enterochelin; tonB-dependent uptake of B colicinschromosome CDS1219902 471 + 0.626327
clpP RPA2961 ATP-dependent Clp protease proteolytic subunitchromosome CDS3353980 639 - 0.621283
csgB, agfB RPA1084 possible minor curlin subunit precursor (fimbrin sef17 minor subunit).chromosome CDS1192666 492 + 0.632114
exbB RPA3278 putative exbB, uptake of enterochelin; tonB-dependent uptake of B colicinschromosome CDS3694230 936 - 0.660256
exbB1 RPA1239 putative biopolymer transport protein ExbBchromosome CDS1357474 987 + 0.681864
exbB2 RPA1350 putative transport protein ExbB2chromosome CDS1495957 2028 + 0.675542
exbB3 RPA2127 putative exbB, uptake of enterochelin; tonB-dependent uptake of B colicinschromosome CDS2390417 798 + 0.704261
exbB5 RPA3478 possible exbB, uptake of enterochelin; tonB-dependent uptake of B colicinschromosome CDS3924149 705 - 0.669504
exbD RPA3277 putative exbD, uptake of enterochelin; tonB-dependent uptake of B colicinschromosome CDS3693766 450 - 0.602222
exbD1 RPA1240 biopolymer transport protein ExbDchromosome CDS1358465 438 + 0.664384
exbD2 RPA1351 transport protein ExbDchromosome CDS1497989 405 + 0.62963
exbD3 RPA2128 biopolymer transport protein ExbD/TolRchromosome CDS2391220 438 + 0.664384
exbD5 RPA3477 exbD, uptake of enterochelin; tonB-dependent uptake of B colicinschromosome CDS3923696 450 - 0.633333
ffh/ftsY RPA0245 signal recognition particle proteinchromosome CDS269157 1551 - 0.660864
flhA RPA1638 putative flagellar export protein FlhAchromosome CDS1818747 2133 - 0.663854
flhB RPA3883 putative flagellar biosynthetic protein flhBchromosome CDS4384623 1074 - 0.621043
fliF RPA1264 putative flagellar M-ring proteinchromosome CDS1385366 1569 + 0.666667
fliI RPA1633 flagellum-specific ATP synthasechromosome CDS1814482 1326 + 0.644042
fliP RPA3890 putative flagellar biosynthesis protein fliPchromosome CDS4389684 765 + 0.619608
fliQ RPA3885 putative flagellar biosynthesis protein fliQchromosome CDS4386597 264 - 0.643939
fliR RPA3884 putative flagellar biosynthetic protein FliRchromosome CDS4385723 768 - 0.645833
fliY RPA1267 putative flagellar motor switch proteinchromosome CDS1388673 348 + 0.643678
ftsY RPA0209 putative cell division protein FtsYchromosome CDS232613 948 - 0.672996
lepB1 RPA0824 signal peptidase Ichromosome CDS921127 771 - 0.688716
lepB2 RPA2696 putative signal peptidase Ichromosome CDS3067767 759 + 0.627141
lspA RPA4376 Signal peptidase II, family A8chromosome CDS4927491 549 - 0.637523
oprN RPA4107 putative outer membrane efflux protein OprN precursorchromosome CDS4647970 1329 + 0.642588
secA RPA0510 preprotein translocase secAchromosome CDS564875 2841 - 0.63534
secB RPA0302 putative protein-export protein SecBchromosome CDS331954 474 - 0.630802
secD RPA2831 protein-export membrane protein secDchromosome CDS3204788 1602 - 0.654182
secE RPA3275 preprotein translocase, SecE subunitchromosome CDS3692405 252 - 0.571429
secF RPA2830 putative protein-export membrane protein secFchromosome CDS3203644 1119 - 0.638963
secG RPA2887 possible secG: preprotein translocasechromosome CDS3264425 405 - 0.674074
secY RPA3230 secretion protein SecYchromosome CDS3648697 1332 - 0.615616
sppA RPA0065 putative protease IVchromosome CDS72242 981 + 0.656473
tatAE RPA2849 putative sec-independent protein translocase protein tatA/Echromosome CDS3223621 237 - 0.603376
tatB RPA2848 possible sec-independent protein secretion pathway component TatBchromosome CDS3222895 510 - 0.670588
tatC RPA2847 putative sec-independent protein translocase component TatCchromosome CDS3222083 816 - 0.631127
traG1 RPA4132 plasmid transfer factor, traGchromosome CDS4672894 1995 - 0.635088
traG2 RPA2235 plasmid transfer factor, traG proteinchromosome CDS2531595 2004 - 0.629242
trbB1 RPA2233 conjugal transfer protein trbBchromosome CDS2530035 984 - 0.675813
trbB2 RPA4124 conjugal transfer protein trbBchromosome CDS4666971 969 - 0.681115
trbC1 RPA2232 putative conjugal transfer protein; TrbCchromosome CDS2529721 318 - 0.625786
trbC2 RPA4123 conjugal transfer protein trbCchromosome CDS4666630 345 - 0.631884
trbD RPA2231 conjugal transfer protein trbDchromosome CDS2529449 273 - 0.684982
trbE1 RPA2230 conjugal transfer protein trbEchromosome CDS2527005 2448 - 0.637255
trbE2 RPA4121 conjugal transfer protein trbEchromosome CDS4663916 2442 - 0.640868
trbF1 RPA2226 putative conjugal transfer protein trbFchromosome CDS2523928 687 - 0.643377
trbF2 RPA4117 conjugal transfer protein trbFchromosome CDS4660813 684 - 0.640351
trbG1 RPA2225 probable conjugal transfer protein trbGchromosome CDS2522927 1002 - 0.646707
trbG2 RPA4116 conjugal transfer protein trbGchromosome CDS4659776 1041 - 0.637848
trbI1 RPA2224 possible trbI, a component on a type IV secretion system (Y10832)chromosome CDS2521686 1245 - 0.677108
trbI2 RPA4115 putative conjugal transfer protein trbIchromosome CDS4658541 1236 - 0.660194
trbJ RPA2229 putative conjugal transfer protein trbJchromosome CDS2526265 744 - 0.645161
trbL RPA2227 putative CONJUGAL TRANSFER protein trbLchromosome CDS2524611 1299 - 0.649731
yajC RPA2832 putative membrane protein, possible preprotein translocasechromosome CDS3206434 438 - 0.621005