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2024-05-08 21:30:36

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Pseudomonas aeruginosa PAO1, PAO1

Number of genes found: 180

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas aeruginosa PAO1, PAO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PA3923 hypothetical proteinchromosome CDS4396121 1926 - 0.647975
NA PA2450 hypothetical proteinchromosome CDS2751744 918 - 0.708061
NA PA3326 probable Clp-family ATP-dependent proteasechromosome CDS3729470 606 - 0.627063
NA PA3352 hypothetical proteinchromosome CDS3763181 471 + 0.681529
NA PA4294 hypothetical proteinchromosome CDS4819357 507 - 0.635108
NA PA2677 probable type II secretion proteinchromosome CDS3022987 1728 - 0.64294
NA PA3404 probable outer membrane protein precursorchromosome CDS3809257 1356 - 0.710914
NA PA5037 hypothetical proteinchromosome CDS5672365 1656 - 0.682367
NA PA4681 hypothetical proteinchromosome CDS5249598 1020 - 0.652941
NA PA1874 hypothetical proteinchromosome CDS2036441 7407 + 0.694073
NA PA2983 probable tolQ-type transport proteinchromosome CDS3340113 636 - 0.649371
NA PA0684 probable type II secretion system proteinchromosome CDS741335 594 + 0.690236
NA PA0021 conserved hypothetical proteinchromosome CDS22872 1089 + 0.730028
NA PA4301 hypothetical proteinchromosome CDS4825041 885 - 0.684746
NA PA5158 probable outer membrane protein precursorchromosome CDS5805679 1479 + 0.706558
NA PA2525 probable outer membrane protein precursorchromosome CDS2846282 1497 - 0.694723
NA PA1095 hypothetical proteinchromosome CDS1186606 381 + 0.595801
NA PA0685 probable type II secretion system proteinchromosome CDS741925 2412 + 0.696932
NA PA1875 probable outer membrane protein precursorchromosome CDS2043847 1278 + 0.677621
NA PA2675 probable type II secretion system proteinchromosome CDS3021307 435 - 0.629885
NA PA4303 hypothetical proteinchromosome CDS4827184 1185 - 0.697046
NA PA1697 ATP synthase in type III secretion systemchromosome CDS1845714 1323 - 0.687075
NA PA0686 probable type II secretion system proteinchromosome CDS744333 1410 + 0.710638
NA PA3521 probable outer membrane protein precursorchromosome CDS3938019 1476 - 0.710705
NA PA1478 hypothetical proteinchromosome CDS1604426 177 + 0.666667
NA PA4299 hypothetical proteinchromosome CDS4823386 738 - 0.718157
NA PA3340 hypothetical proteinchromosome CDS3749718 2049 - 0.707662
NA PA1034 hypothetical proteinchromosome CDS1123148 201 - 0.606965
NA PA0687 probable type II secretion system proteinchromosome CDS745742 1215 + 0.725926
NA PA5486 conserved hypothetical proteinchromosome CDS6177324 594 - 0.688552
NA PA0692 hypothetical proteinchromosome CDS763657 1635 + 0.674006
NA PA0678 probable type II secretion system proteinchromosome CDS737081 450 - 0.706667
NA PA0919 hypothetical proteinchromosome CDS1002681 1284 - 0.672897
NA PA3869 hypothetical proteinchromosome CDS4332652 384 + 0.549479
NA PA5284 hypothetical proteinchromosome CDS5948695 915 - 0.636066
NA PA0659 hypothetical proteinchromosome CDS712081 1077 - 0.671309
NA PA5205 conserved hypothetical proteinchromosome CDS5859792 702 + 0.656695
NA PA4624 hypothetical proteinchromosome CDS5184641 1707 - 0.646749
NA PA4295 hypothetical proteinchromosome CDS4819927 483 + 0.507246
NA PA3619 hypothetical proteinchromosome CDS4053391 1008 + 0.678571
NA PA4625 hypothetical proteinchromosome CDS5186410 6465 - 0.646558
NA PA2462 hypothetical proteinchromosome CDS2761920 16884 - 0.650853
NA PA3351 hypothetical proteinchromosome CDS3762803 324 + 0.645062
NA PA4592 probable outer membrane protein precursorchromosome CDS5143052 1482 - 0.666667
NA PA2837 probable outer membrane protein precursorchromosome CDS3190210 1440 + 0.709722
NA PA3740 hypothetical proteinchromosome CDS4193674 687 + 0.641921
NA PA5568 conserved hypothetical proteinchromosome CDS6261827 1737 - 0.625216
NA PA2672 probable type II secretion system proteinchromosome CDS3019916 591 - 0.651438
NA PA4540 hypothetical proteinchromosome CDS5080756 1638 + 0.661172
NA PA4144 probable outer membrane protein precursorchromosome CDS4636297 1416 + 0.721751
NA PA1832 probable proteasechromosome CDS1990428 1026 + 0.647173
NA PA4541 hypothetical proteinchromosome CDS5082442 4254 + 0.656559
NA PA3894 probable outer membrane protein precursorchromosome CDS4361493 1491 - 0.692824
NA PA0682 probable type II secretion system proteinchromosome CDS739176 966 + 0.689441
NA PA2973 probable peptidasechromosome CDS3329689 981 - 0.630989
NA PA0681 probable type II secretion system proteinchromosome CDS738719 450 + 0.682222
NA PA2633 hypothetical proteinchromosome CDS2976339 822 + 0.66545
NA PA1692 probable translocation protein in type III secretionchromosome CDS1842299 267 - 0.655431
NA PA3205 hypothetical proteinchromosome CDS3595386 441 + 0.653061
NA PA4974 probable outer membrane protein precursorchromosome CDS5584100 1449 + 0.68668
NA PA4302 probable type II secretion system proteinchromosome CDS4825922 1266 - 0.675355
NA PA0677 probable type II secretion system proteinchromosome CDS736456 642 - 0.714953
NA PA5210 probable secretion pathway ATPasechromosome CDS5865226 1785 + 0.677871
NA PA1103 probable flagellar assembly proteinchromosome CDS1195225 807 + 0.671623
NA PA4304 probable type II secretion system proteinchromosome CDS4828378 1251 - 0.677858
NA PA2463 hypothetical proteinchromosome CDS2778916 1698 - 0.696702
NA PA2676 probable type II secretion system proteinchromosome CDS3021795 1188 - 0.654882
NA PA1924 hypothetical proteinchromosome CDS2103294 477 + 0.691824
NA PA0040 conserved hypothetical proteinchromosome CDS41113 1689 + 0.699822
NA PA1303 probable signal peptidasechromosome CDS1414147 540 - 0.688889
NA PA3822 conserved hypothetical proteinchromosome CDS4279006 339 - 0.610619
NA PA1382 probable type II secretion system proteinchromosome CDS1498813 2280 + 0.59693
NA PA0690 hypothetical proteinchromosome CDS749957 12543 + 0.676234
NA PA4651 probable pili assembly chaperonechromosome CDS5216763 789 + 0.705957
NA PA4305 hypothetical proteinchromosome CDS4829642 912 - 0.702851
NA PA0499 probable pili assembly chaperonechromosome CDS558377 702 - 0.639601
NA PA5211 conserved hypothetical proteinchromosome CDS5867232 453 + 0.713024
NA PA4300 hypothetical proteinchromosome CDS4824120 912 - 0.672149
NA PA2189 hypothetical proteinchromosome CDS2409107 555 + 0.610811
NA PA0505 hypothetical proteinchromosome CDS564344 231 + 0.683983
NA PA4857 hypothetical proteinchromosome CDS5455433 594 + 0.658249
NA PA0680 probable type II secretion system proteinchromosome CDS738111 375 - 0.693333
NA PA1238 probable outer membrane component of multidrug efflux pumpchromosome CDS1339079 1449 - 0.743961
NA PA4652 hypothetical proteinchromosome CDS5217568 2373 + 0.684366
NA PA4718 hypothetical proteinchromosome CDS5297006 477 - 0.706499
NA PA0041 probable hemagglutininchromosome CDS42914 10608 + 0.685709
NA PA2982 conserved hypothetical proteinchromosome CDS3339676 441 - 0.653061
aprF PA1248 Alkaline protease secretion outer membrane protein AprF precursorchromosome CDS1353827 1446 + 0.681881
clpP PA1801 ATP-dependent Clp protease proteolytic subunitchromosome CDS1954069 642 + 0.609034
cupA1 PA2128 fimbrial subunit CupA1chromosome CDS2342493 552 + 0.673913
cupA2 PA2129 chaperone CupA2chromosome CDS2343132 747 + 0.68407
cupA3 PA2130 usher CupA3chromosome CDS2343862 2619 + 0.688049
cupA5 PA2132 chaperone CupA5chromosome CDS2347828 714 + 0.712885
cupB1 PA4086 probable fimbrial subunit CupB1chromosome CDS4569053 570 - 0.608772
cupB2 PA4085 chaperone CupB2chromosome CDS4568276 747 - 0.579652
cupB3 PA4084 usher CupB3chromosome CDS4565420 2535 - 0.676923
cupB4 PA4083 chaperone CupB4chromosome CDS4564683 741 - 0.716599
cupB5 PA4082 adhesive protein CupB5chromosome CDS4561539 3057 - 0.675499
cupB6 PA4081 fimbrial subunit CupB6chromosome CDS4560294 1146 - 0.659686
cupC1 PA0992 fimbrial subunit CupC1chromosome CDS1073285 618 + 0.582524
cupC2 PA0993 chaperone CupC2chromosome CDS1073960 714 + 0.522409
cupC3 PA0994 usher CupC3chromosome CDS1074784 2520 + 0.597222
czcC PA2522 outer membrane protein precursor CzcCchromosome CDS2842018 1287 - 0.714841
exbB1 PA0198 transport protein ExbBchromosome CDS228223 720 + 0.7
exbD1 PA0199 transport protein ExbDchromosome CDS228944 402 + 0.646766
exbD2 PA0694 transport protein ExbDchromosome CDS767173 420 + 0.664286
ffh PA3746 signal recognition particle protein Ffhchromosome CDS4197168 1374 - 0.643377
fimT PA4549 type 4 fimbrial biogenesis protein FimTchromosome CDS5097596 510 + 0.639216
fimU PA4550 type 4 fimbrial biogenesis protein FimUchromosome CDS5098211 507 + 0.621302
fimV PA3115 Motility protein FimVchromosome CDS3495445 2760 - 0.671739
flhA PA1452 flagellar biosynthesis protein FlhAchromosome CDS1580321 2124 + 0.659605
flhB PA1449 flagellar biosynthetic protein FlhBchromosome CDS1576338 1137 + 0.671944
fliE PA1100 flagellar hook-basal body complex protein FliEchromosome CDS1192053 330 + 0.615152
fliF PA1101 Flagella M-ring outer membrane protein precursorchromosome CDS1192405 1797 + 0.673901
fliI PA1104 flagellum-specific ATP synthase FliIchromosome CDS1196021 1356 + 0.695428
fliJ PA1105 flagellar protein FliJchromosome CDS1197390 444 + 0.68018
fliN PA1444 flagellar motor switch protein FliNchromosome CDS1573551 474 + 0.656118
fliP PA1446 flagellar biosynthetic protein FliPchromosome CDS1574475 768 + 0.639323
fliQ PA1447 flagellar biosynthetic protein FliQchromosome CDS1575290 270 + 0.640741
fliR PA1448 flagellar biosynthetic protein FliRchromosome CDS1575559 777 + 0.657658
ftsY PA0373 signal recognition particle receptor FtsYchromosome CDS417527 1368 + 0.694444
gbt PA3082 glycine betaine transmethylasechromosome CDS3457968 1965 - 0.64631
hasAp PA3407 heme acquisition protein HasApchromosome CDS3813957 618 - 0.684466
lepB PA0768 signal peptidase Ichromosome CDS837328 855 + 0.621053
lspA PA4559 prolipoprotein signal peptidasechromosome CDS5106448 510 - 0.633333
opmD PA4208 probable outer membrane protein precursorchromosome CDS4710620 1464 + 0.729508
opmQ PA2391 probable outer membrane protein precursorchromosome CDS2645303 1425 + 0.705263
oprJ PA4597 Multidrug efflux outer membrane protein OprJ precursorchromosome CDS5149632 1440 - 0.696528
oprM PA0427 Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursorchromosome CDS476333 1458 + 0.685871
oprN PA2495 Multidrug efflux outer membrane protein OprN precursorchromosome CDS2813193 1419 + 0.710359
pcrD PA1703 type III secretory apparatus protein PcrDchromosome CDS1849403 2121 + 0.657237
pilA PA4525 type 4 fimbrial precursor PilAchromosome CDS5069081 450 - 0.486667
pilB PA4526 type 4 fimbrial biogenesis protein PilBchromosome CDS5069762 1701 + 0.605526
pilC PA4527 still frameshift type 4 fimbrial biogenesis protein PilCchromosome CDS5071566 1125 + 0.547556
pilD PA4528 type 4 prepilin peptidase PilDchromosome CDS5072694 873 + 0.649485
pilE PA4556 type 4 fimbrial biogenesis protein PilEchromosome CDS5104513 426 + 0.631455
pilF PA3805 type 4 fimbrial biogenesis protein PilFchromosome CDS4264529 759 - 0.628458
pilM PA5044 type 4 fimbrial biogenesis protein PilMchromosome CDS5679648 1065 - 0.632864
pilN PA5043 type 4 fimbrial biogenesis protein PilNchromosome CDS5679052 597 - 0.621441
pilO PA5042 type 4 fimbrial biogenesis protein PilOchromosome CDS5678432 624 - 0.612179
pilP PA5041 type 4 fimbrial biogenesis protein PilPchromosome CDS5677911 525 - 0.641905
pilQ PA5040 Type 4 fimbrial biogenesis outer membrane protein PilQ precursorchromosome CDS5675713 2145 - 0.629371
pilT PA0395 twitching motility protein PilTchromosome CDS436570 1035 + 0.631884
pilU PA0396 twitching motility protein PilUchromosome CDS437782 1149 + 0.659704
pilV PA4551 type 4 fimbrial biogenesis protein PilVchromosome CDS5098708 558 + 0.639785
pilW PA4552 type 4 fimbrial biogenesis protein PilWchromosome CDS5099262 825 + 0.621818
pilX PA4553 type 4 fimbrial biogenesis protein PilXchromosome CDS5100083 588 + 0.644558
pilY1 PA4554 type 4 fimbrial biogenesis protein PilY1chromosome CDS5100682 3486 + 0.626506
pilZ PA2960 type 4 fimbrial biogenesis protein PilZchromosome CDS3319673 357 - 0.607843
pscC PA1716 Type III secretion outer membrane protein PscC precursorchromosome CDS1859493 1803 + 0.672768
pscJ PA1723 type III export protein PscJchromosome CDS1864134 747 + 0.647925
pscL PA1725 type III export protein PscLchromosome CDS1865494 645 + 0.672868
pscQ PA1694 translocation protein in type III secretionchromosome CDS1843218 930 - 0.704301
pscR PA1693 translocation protein in type III secretionchromosome CDS1842568 654 - 0.631498
pscT PA1691 translocation protein in type III secretionchromosome CDS1841514 789 - 0.666667
pscU PA1690 translocation protein in type III secretionchromosome CDS1840468 1050 - 0.642857
secA PA4403 secretion protein SecAchromosome CDS4933865 2751 - 0.637223
secB PA5128 secretion protein SecBchromosome CDS5776605 492 - 0.621951
secD PA3821 secretion protein SecDchromosome CDS4277084 1863 - 0.650564
secE PA4276 secretion protein SecEchromosome CDS4783770 369 - 0.531165
secF PA3820 secretion protein SecFchromosome CDS4276153 921 - 0.630836
secG PA4747 secretion protein SecGchromosome CDS5332353 390 - 0.538462
secY PA4243 secretion protein SecYchromosome CDS4757123 1329 - 0.595937
tatA PA5068 translocation protein TatAchromosome CDS5706551 249 + 0.62249
tatB PA5069 translocation protein TatBchromosome CDS5706813 426 + 0.699531
tatC PA5070 transport protein TatCchromosome CDS5707235 804 + 0.640547
tolB PA0972 TolB proteinchromosome CDS1056049 1299 + 0.628945
tolQ PA0969 TolQ proteinchromosome CDS1053848 696 + 0.635057
tolR PA0970 TolR proteinchromosome CDS1054566 441 + 0.582766
xcpQ PA3105 general secretion pathway protein Dchromosome CDS3484353 1977 + 0.65301
xcpR PA3103 general secretion pathway protein Echromosome CDS3481913 1509 - 0.689198
xcpS PA3102 general secretion pathway protein Fchromosome CDS3480696 1218 - 0.691297
xcpT PA3101 general secretion pathway protein Gchromosome CDS3480245 447 - 0.637584
xcpU PA3100 General secretion pathway outer membrane protein H precursorchromosome CDS3479720 519 - 0.693642
xcpV PA3099 general secretion pathway protein Ichromosome CDS3479334 390 - 0.689744
xcpW PA3098 general secretion pathway protein Jchromosome CDS3478624 714 - 0.697479
xcpX PA3097 general secretion pathway protein Kchromosome CDS3477626 1002 - 0.668663
xcpY PA3096 general secretion pathway protein Lchromosome CDS3476481 1149 - 0.717145
xcpZ PA3095 general secretion pathway protein Mchromosome CDS3475955 525 - 0.721905
xqhA PA1868 secretion protein XqhAchromosome CDS2028968 2331 + 0.698413