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2024-05-17 13:41:38

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Photorhabdus luminescens subsp. laumondii TTO1, TTO1

Number of genes found: 150

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Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA plu3064 SubName: Full=Complete genome; segment 11/17; chromosome CDS3566742 5088 - 0.40055
NA plu2646 SubName: Full=Complete genome; segment 9/17; chromosome CDS3099833 1479 - 0.469236
NA plu0225 SubName: Full=Complete genome; segment 1/17; chromosome CDS230329 5160 - 0.431977
NA plu4906 RecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS5686149 1641 - 0.442413
NA plu2158 SubName: Full=Complete genome; segment 8/17; chromosome CDS2542960 675 - 0.373333
NA plu1368 SubName: Full=Complete genome; segment 5/17; chromosome CDS1638740 1665 - 0.545345
NA plu0505 SubName: Full=Complete genome; segment 2/17; chromosome CDS553888 2475 - 0.407273
NA plu3569 SubName: Full=Complete genome; segment 13/17; chromosome CDS4208442 1680 - 0.495833
NA plu3458 SubName: Full=Complete genome; segment 12/17; chromosome CDS4065904 1173 + 0.388747
NA plu1901 SubName: Full=Complete genome; segment 7/17; chromosome CDS2264814 402 + 0.507463
NA plu0548 SubName: Full=Complete genome; segment 2/17; chromosome CDS604770 13749 - 0.504109
NA plu3794 SubName: Full=Complete genome; segment 13/17; chromosome CDS4458146 1029 + 0.302235
NA plu1149 SubName: Full=Complete genome; segment 4/17; chromosome CDS1327789 8814 - 0.565804
NA plu2156 SubName: Full=Complete genome; segment 8/17; chromosome CDS2539370 993 - 0.373615
NA plu0791 SubName: Full=Complete genome; segment 3/17; chromosome CDS909069 2643 + 0.540295
NA plu3324 SubName: Full=Complete genome; segment 12/17; chromosome CDS3942670 10596 - 0.456399
NA plu2157 SubName: Full=Complete genome; segment 8/17; chromosome CDS2540382 2541 - 0.37741
NA plu0789 SubName: Full=Complete genome; segment 3/17; chromosome CDS907349 750 + 0.548
NA plu3718 SubName: Full=Complete genome; segment 13/17; chromosome CDS4374057 9084 - 0.566821
NA plu0782 SubName: Full=Complete genome; segment 3/17; chromosome CDS899467 735 + 0.572789
NA plu0792 SubName: Full=Complete genome; segment 3/17; chromosome CDS911804 1155 + 0.545455
NA plu1150 SubName: Full=Complete genome; segment 4/17; chromosome CDS1336651 1665 - 0.563964
NA plu0790 SubName: Full=Complete genome; segment 3/17; chromosome CDS908129 858 + 0.536131
NA plu2963 SubName: Full=Complete genome; segment 10/17; chromosome CDS3469335 639 - 0.4241
NA plu2495 SubName: Full=Complete genome; segment 9/17; chromosome CDS2936906 645 - 0.44031
NA plu0267 SubName: Full=Complete genome; segment 1/17; chromosome CDS282321 795 + 0.469182
NA plu1374 SubName: Full=Complete genome; segment 5/17; chromosome CDS1653561 402 + 0.462687
NA plu0783 SubName: Full=Complete genome; segment 3/17; chromosome CDS900232 783 + 0.583653
NA plu2119 SubName: Full=Complete genome; segment 8/17; chromosome CDS2503502 1014 - 0.382643
NA plu0415 SubName: Full=Complete genome; segment 2/17; chromosome CDS442724 759 - 0.479578
NA plu3008 SubName: Full=Complete genome; segment 11/17; chromosome CDS3508362 753 + 0.454183
NA plu1742 SubName: Full=Complete genome; segment 6/17; chromosome CDS2077196 1098 + 0.479053
NA plu4453 SubName: Full=Complete genome; segment 15/17; chromosome CDS5206762 1422 + 0.457103
NA plu1181 SubName: Full=Complete genome; segment 4/17; chromosome CDS1364634 1038 + 0.454721
NA plu1734 SubName: Full=Complete genome; segment 6/17; chromosome CDS2069910 1176 + 0.469388
NA plu1738 SubName: Full=Complete genome; segment 6/17; chromosome CDS2072176 1605 + 0.489097
NA plu1741 SubName: Full=Complete genome; segment 6/17; chromosome CDS2075627 1563 + 0.513116
NA plu0418 SubName: Full=Complete genome; segment 2/17; chromosome CDS447141 567 - 0.492063
NA plu0416 SubName: Full=Complete genome; segment 2/17; chromosome CDS443812 2589 - 0.500579
NA plu2519 SubName: Full=Complete genome; segment 9/17; chromosome CDS2965716 1257 - 0.385839
NA plu0262 SubName: Full=Complete genome; segment 1/17; chromosome CDS278598 741 + 0.460189
NA plu1186 SubName: Full=Complete genome; segment 4/17; chromosome CDS1368836 612 + 0.325163
NA plu0780 SubName: Full=Complete genome; segment 3/17; chromosome CDS898142 720 + 0.547222
NA plu0784 SubName: Full=Complete genome; segment 3/17; chromosome CDS901098 2643 + 0.579644
NA plu1696 SubName: Full=Complete genome; segment 6/17; chromosome CDS2024611 951 - 0.360673
NA plu0093 SubName: Full=Complete genome; segment 1/17; chromosome CDS87563 555 - 0.394595
NA plu0549 SubName: Full=Complete genome; segment 2/17; chromosome CDS618577 1692 - 0.473995
NA plu1718 SubName: Full=Complete genome; segment 6/17; chromosome CDS2049818 1305 - 0.384674
NA plu0094 SubName: Full=Complete genome; segment 1/17; chromosome CDS88117 831 - 0.45728
NA plu2159 SubName: Full=Complete genome; segment 8/17; chromosome CDS2543749 531 - 0.393597
NA plu3822 SubName: Full=Complete genome; segment 13/17; chromosome CDS4490122 456 + 0.510965
NA plu2057 SubName: Full=Complete genome; segment 7/17; chromosome CDS2430656 5088 + 0.454599
NA plu3788 SubName: Full=Complete genome; segment 13/17; chromosome CDS4451122 984 + 0.470528
NA plu3594 SubName: Full=Complete genome; segment 13/17; chromosome CDS4236073 6408 - 0.477372
NA plu0417 SubName: Full=Complete genome; segment 2/17; chromosome CDS446415 603 - 0.474295
NA plu2879 SubName: Full=Complete genome; segment 10/17; chromosome CDS3414237 846 - 0.429078
NA plu0091 SubName: Full=Complete genome; segment 1/17; chromosome CDS86004 1035 - 0.406763
NA plu0830 SubName: Full=Complete genome; segment 3/17; chromosome CDS961486 1299 + 0.535027
NA plu3630 SubName: Full=Complete genome; segment 13/17; chromosome CDS4280090 387 + 0.423773
NA plu0537 SubName: Full=Complete genome; segment 2/17; chromosome CDS591409 2823 - 0.557209
NA plu3065 SubName: Full=Complete genome; segment 11/17; chromosome CDS3571890 1680 - 0.441071
NA plu3577 SubName: Full=Complete genome; segment 13/17; chromosome CDS4215688 2787 - 0.517761
NA plu0266 SubName: Full=Complete genome; segment 1/17; chromosome CDS281565 720 + 0.488889
NA plu0506 SubName: Full=Complete genome; segment 2/17; chromosome CDS556388 699 - 0.354793
NA plu0268 SubName: Full=Complete genome; segment 1/17; chromosome CDS283299 2631 + 0.516914
NA plu3797 SubName: Full=Complete genome; segment 13/17; chromosome CDS4462680 1080 + 0.323148
NA plu3382 SubName: Full=Complete genome; segment 12/17; chromosome CDS4008098 1344 - 0.392857
NA plu0245 SubName: Full=Complete genome; segment 1/17; chromosome CDS259864 1707 - 0.421207
NA plu0226 SubName: Full=Complete genome; segment 1/17; chromosome CDS235518 1680 - 0.495238
NA plu3719 SubName: Full=Complete genome; segment 13/17; chromosome CDS4383189 1665 - 0.556156
NA plu3631 SubName: Full=Complete genome; segment 13/17; chromosome CDS4280806 717 + 0.527197
NA plu1367 SubName: Full=Complete genome; segment 5/17; chromosome CDS1629806 8886 - 0.564821
NA plu2453 SubName: Full=Complete genome; segment 9/17; chromosome CDS2880371 5064 + 0.400276
NA plu1733 Type 4 prepilin-like proteins leader peptide processing enzyme (Pectic enzymes secretion protein outO) [Includes: Leader peptidase (Prepilin peptidaseRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS2069076 795 + 0.506918
NA plu0787 SubName: Full=Complete genome; segment 3/17; chromosome CDS906027 717 + 0.524407
NA plu0539 SubName: Full=Complete genome; segment 2/17; chromosome CDS594793 1800 - 0.481667
NA plu0507 SubName: Full=Complete genome; segment 2/17; chromosome CDS557154 582 - 0.398625
clpP plu3869 ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 (Endopeptidase Clp)RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS4545372 624 - 0.43109
cpxP plu4793 periplasmic protein precursorSubName: Full=Periplasmic protein; chromosome CDS5566624 495 - 0.438384
exbB plu3941 Biopolymer transport protein ExbBSubName: Full=Biopolymer transport protein ExbB; chromosome CDS4625742 1035 - 0.48599
exbD plu3940 Biopolymer transport protein ExbDSubName: Full=Biopolymer transport protein ExbD; chromosome CDS4625313 426 - 0.438967
ffh plu1256 Signal recognition particle protein (P48)RecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS1454569 1362 + 0.456681
flgM plu1913 Negative regulator of flagellin synthesis (Anti-sigma-28 factor) FlgMSubName: Full=Negative regulator of flagellin synthesis (Anti-sigma-28 factor) FlgM; chromosome CDS2280636 303 - 0.448845
flgN plu1912 Flagella synthesis protein FlgNSubName: Full=Flagella synthesis protein FlgN; chromosome CDS2280184 441 - 0.446712
flhA plu1896 Flagellar biosynthesis protein FlhASubName: Full=Flagellar biosynthesis protein FlhA; chromosome CDS2257556 2082 + 0.48463
flhB plu1895 Flagellar biosynthetic protein FlhBSubName: Full=Flagellar biosynthetic protein FlhB; chromosome CDS2256412 1152 + 0.469618
fliE plu1949 flagellar hook-basal body 11K protein FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS2315342 312 + 0.439103
fliF plu1948 flagellar basal-body M-ring proteinRecName: Full=Flagellar M-ring protein; chromosome CDS2313353 1704 - 0.491784
fliH plu1946 Flagellar assembly protein FliHSubName: Full=Flagellar assembly protein FliH; chromosome CDS2311667 705 - 0.50922
fliI plu1945 flagellum-specific ATP synthaseSubName: Full=Flagellum-specific ATP synthase; chromosome CDS2310303 1365 - 0.531868
fliJ plu1944 Flagellar protein FliJSubName: Full=Flagellar protein FliJ; chromosome CDS2309817 444 - 0.45045
fliN plu1940 Flagellar motor switch protein FliNSubName: Full=Flagellar motor switch protein FliN; chromosome CDS2306417 420 - 0.47381
fliP plu1938 flagellar biosynthetic protein FliPSubName: Full=Flagellar biosynthetic protein FliP; chromosome CDS2305197 735 - 0.469388
fliQ plu1937 flagellar biosynthetic protein FliQSubName: Full=Flagellar biosynthetic protein FliQ; chromosome CDS2304907 270 - 0.47037
fliR plu1936 Flagellar biosynthetic protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS2304122 783 - 0.443167
fliS plu1952 Flagellar protein FliSSubName: Full=Flagellar protein FliS; chromosome CDS2317842 411 - 0.437956
ftsY plu4104 cell division proteinRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS4792359 1275 - 0.465098
hofB plu3639 Protein transport protein HofBSubName: Full=Protein transport protein HofB; chromosome CDS4286662 1443 + 0.362439
hofC plu3640 Protein transport protein HofCSubName: Full=Protein transport protein HofC; chromosome CDS4288107 1200 + 0.349167
lepB plu3341 Signal peptidase I (SPase I) (Leader peptidase I)RecName: Full=Signal peptidase I; EC=3.4.21.89; chromosome CDS3968282 981 - 0.438328
lspA plu0592 Lipoprotein signal peptidase (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS674775 504 + 0.428571
mrfA plu0769 MrfA proteinSubName: Full=MrfA protein; chromosome CDS888552 540 + 0.481481
mrfB plu0770 MrfB proteinSubName: Full=MrfB protein; chromosome CDS889175 549 + 0.495446
mrfC plu0771 Outer membrane usher protein MrfCSubName: Full=Outer membrane usher protein MrfC; chromosome CDS889743 2556 + 0.491784
mrfD plu0772 MrfD proteinSubName: Full=MrfD protein; chromosome CDS892422 750 + 0.498667
mrfG plu0776 MrfG proteinSubName: Full=MrfG protein; chromosome CDS894875 546 + 0.43956
phfA plu0994 SubName: Full=PhfA protein; chromosome CDS1177360 981 - 0.317023
phfB plu0993 SubName: Full=PhfB protein; chromosome CDS1175942 1011 - 0.351137
phfC plu0996 SubName: Full=PhfC protein; chromosome CDS1180887 669 - 0.384155
phfD plu0995 SubName: Full=PhfD protein; chromosome CDS1178368 2514 - 0.389021
phfS plu0997 SubName: Full=PhfS protein; chromosome CDS1181612 510 - 0.364706
phlA plu0316 Hemolysin PhlASubName: Full=Hemolysin PhlA; chromosome CDS334184 4443 - 0.437767
phlB plu0317 PhlA hemolysin secretion/activation protein PhlBSubName: Full=PhlA hemolysin secretion/activation protein PhlB; chromosome CDS338692 1668 - 0.444844
pilN plu1051 SubName: Full=PilN protein; chromosome CDS1229437 1704 + 0.502347
pilQ plu1054 SubName: Full=PilQ protein; chromosome CDS1232966 1554 + 0.51287
pilR plu1055 SubName: Full=PilR protein; chromosome CDS1234512 1086 + 0.494475
pilU plu1057 SubName: Full=PilU protein; chromosome CDS1236269 666 + 0.489489
ppdA plu0626 Prepilin peptidase dependent protein A precursorSubName: Full=Prepilin peptidase dependent protein A; chromosome CDS711641 516 + 0.350775
ppdB plu0627 Prepilin peptidase dependent protein B precursorSubName: Full=Prepilin peptidase dependent protein B; chromosome CDS712324 588 + 0.358844
ppdC plu0629 Prepilin peptidase dependent protein C precursorSubName: Full=Prepilin peptidase dependent protein C; chromosome CDS713393 378 + 0.388889
ppdD plu3638 Prepilin peptidase dependent protein D precursorSubName: Full=Prepilin peptidase dependent protein D; chromosome CDS4286072 423 + 0.323877
prtD plu0659 Outer membrane protein PrtDSubName: Full=Outer membrane protein PrtD; chromosome CDS757911 1377 + 0.458969
sctC plu3778 Type III secretion component protein SctCSubName: Full=Type III secretion component protein SctC; chromosome CDS4444107 1845 + 0.479133
sctJ plu3785 Type III secretion component protein SctJSubName: Full=Type III secretion component protein SctJ; chromosome CDS4449008 738 + 0.49729
sctL plu3787 Type III secretion component protein SctLSubName: Full=Type III secretion component protein SctL; chromosome CDS4450350 618 + 0.466019
sctN plu3767 Type III secretion component protein SctNSubName: Full=Type III secretion component protein SctN; chromosome CDS4434397 1323 + 0.507937
sctQ plu3770 Type III secretion component protein SctQSubName: Full=Type III secretion component protein SctQ; chromosome CDS4437319 933 + 0.493033
sctR plu3771 Type III secretion component protein SctRSubName: Full=Type III secretion component protein SctR; chromosome CDS4438248 654 + 0.443425
sctS plu3772 Type III secretion component protein SctSSubName: Full=Type III secretion component protein SctS; chromosome CDS4438904 267 + 0.438202
sctT plu3773 Type III secretion component protein SctTSubName: Full=Type III secretion component protein SctT; chromosome CDS4439167 789 + 0.48289
sctU plu3774 Type III secretion component protein SctUSubName: Full=Type III secretion component protein SctU; chromosome CDS4439952 1056 + 0.456439
sctV plu3761 Type III secretion protein SctVSubName: Full=Type III secretion protein SctV; chromosome CDS4429651 2118 - 0.481114
secA plu3645 Preprotein translocase SecA subunitRecName: Full=Protein translocase subunit SecA; chromosome CDS4291546 2712 - 0.45059
secB plu4839 Protein-export protein SecBRecName: Full=Protein-export protein SecB; chromosome CDS5612392 477 - 0.48218
secD plu3902 Protein-export membrane protein SecDRecName: Full=Protein translocase subunit SecD; chromosome CDS4573541 1848 - 0.471861
secE plu0433 Preprotein translocase SecE subunitRecName: Full=Protein translocase subunit SecE; chromosome CDS460617 384 + 0.486979
secF plu3901 Protein-export membrane protein SecFRecName: Full=Protein-export membrane protein SecF; chromosome CDS4572562 969 - 0.457172
secG plu4532 Protein-export membrane protein SecG (Preprotein translocase band 1 subunit) (P12)SubName: Full=Protein-export membrane protein SecG (Preprotein translocase band 1 subunit) (P12); chromosome CDS5294034 339 - 0.474926
secY plu4706 Preprotein translocase SecY subunitRecName: Full=Protein translocase subunit SecY; chromosome CDS5488023 1332 - 0.45045
smf plu4694 Smf proteinSubName: Full=Smf protein; chromosome CDS5478193 1086 - 0.409761
sohB plu2439 Possible protease sohBSubName: Full=Possible protease sohB; chromosome CDS2862686 1047 - 0.450812
sppA plu2553 protease IV (endopeptidase IV) (signal peptide peptidase)RecName: Full=Protease 4; EC=3.4.21.-; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase; chromosome CDS2996740 1866 + 0.460343
tatA plu4410 Sec-independent protein translocase proteinRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS5158550 261 - 0.402299
tatB plu4409 Sec-independent protein translocase proteinRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS5158103 444 - 0.470721
tatC plu4408 Sec-independent protein translocase proteinRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS5157299 783 - 0.425287
tolB plu1455 TolB protein precursorRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS1747179 1293 + 0.484919
tolC plu3954 Outer membrane protein precursor TolCSubName: Full=Outer membrane protein TolC; chromosome CDS4641003 1374 + 0.435953
tolQ plu1452 TolQ proteinSubName: Full=TolQ protein; chromosome CDS1744714 696 + 0.439655
tolR plu1453 TolR proteinSubName: Full=TolR protein; chromosome CDS1745424 426 + 0.448357
yajC plu3903 Preprotein translocase YajCSubName: Full=Preprotein translocase YajC; chromosome CDS4575416 330 - 0.439394