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2024-05-04 07:42:31

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Bordetella bronchiseptica, RB50

Number of genes found: 128

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bordetella bronchiseptica, RB50
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BB2098 probable secretory proteinchromosome CDS2242980 1617 + 0.700062
NA BB3199 putative lipoproteinchromosome CDS3414226 762 - 0.762467
NA BB4899 putative bacterial secretion system proteinchromosome CDS5206806 702 + 0.669516
NA BB1829 putative membrane proteinchromosome CDS1933871 927 + 0.707659
NA BB2009 putative biopolymer transport proteinchromosome CDS2146636 414 - 0.688406
NA BB2010 putative biopolymer transport proteinchromosome CDS2147046 621 - 0.702093
NA BB2099 putative membrane proteinchromosome CDS2244593 846 + 0.729314
NA BB0821 autotransporterchromosome CDS865043 2964 - 0.693657
NA BB1819 putative exported proteinchromosome CDS1924087 1713 - 0.664915
NA BB4237 putative TolB-like translocation proteinchromosome CDS4511440 1326 + 0.659879
NA BB1825 putative membrane proteinchromosome CDS1928821 942 + 0.729299
NA BB1827 conserved hypothetical proteinchromosome CDS1931161 1350 + 0.71037
NA BB3111 autotransporterchromosome CDS3317747 1587 - 0.713296
NA BB1830 putative membrane proteinchromosome CDS1934806 987 + 0.717325
NA BB2941 putative autotransporterchromosome CDS3124807 2814 - 0.712864
NA BB4462 putative outer membrane proteinchromosome CDS4758151 1320 + 0.696212
NA BB1889 putative outer membrane proteinchromosome CDS2009009 1422 - 0.733474
NA BB0780 putative type II secretion system proteinchromosome CDS817328 1254 - 0.677831
NA BB2097 putative secretory apparatuschromosome CDS2241571 1413 + 0.714791
NA BB0450 autotransporterchromosome CDS467491 6459 + 0.690664
NA BB2830 putative autotransporterchromosome CDS2995452 2550 - 0.723137
NA BB3424 fimbrial proteinchromosome CDS3669326 633 + 0.603476
NA BB4901 putative bacterial secretion system proteinchromosome CDS5208306 1125 + 0.697778
NA BB2270 autotransporterchromosome CDS2399520 1680 + 0.67381
NA BB3347 putative efflux system outer membrane componentchromosome CDS3573930 1500 - 0.698667
NA BB4900 putative bacterial secretion system proteinchromosome CDS5207504 822 + 0.6691
NA BB1191 putative outer membrane proteinchromosome CDS1283768 1470 - 0.667347
NA BB0777 hypothetical proteinchromosome CDS812826 1212 - 0.733498
NA BB4235 putative TolR-like translocation proteinchromosome CDS4509798 459 + 0.668845
NA BB1826 putative type II secretion system proteinchromosome CDS1929818 1347 + 0.704529
NA BB3854 outer membrane component of multidrug efflux systemchromosome CDS4086459 1464 + 0.734973
NA BB0435 putative exported proteinchromosome CDS450558 1530 - 0.733987
NA BB0305 putative lipoproteinchromosome CDS309413 567 + 0.684303
NA BB1831 putative lipoproteinchromosome CDS1935792 843 + 0.73191
NA BB4993 probable inner-membrane proteinchromosome CDS5312919 1665 + 0.658258
NA BB4234 putative TolQ-like translocation proteinchromosome CDS4509118 681 + 0.660793
NA BB0452 autotransporterchromosome CDS474574 7134 + 0.700449
NA BB3195 putative general secretion pathway proteinchromosome CDS3409187 1716 - 0.731352
NA BB2096 putative exported proteinchromosome CDS2240741 834 + 0.724221
NA BB3084 probable outer membrane efflux proteinchromosome CDS3287714 1422 + 0.748242
NA BB4435 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS4725976 840 - 0.722619
NA BB0781 putative type II secretion system proteinchromosome CDS818578 1626 - 0.705412
NA BB3304 hypothetical proteinchromosome CDS3532929 885 - 0.710734
NA BB4228 hypothetical proteinchromosome CDS4502054 1977 + 0.688923
NA BB4008 hypothetical proteinchromosome CDS4258016 1452 - 0.723829
NA BB2134 putative membrane proteinchromosome CDS2282449 1785 + 0.7507
NA BB4429 putative outer membrane efflux proteinchromosome CDS4715397 1503 - 0.735862
NA BB1361 putative secreted proteinchromosome CDS1455665 345 - 0.611594
NA BB2100 putative membrane proteinchromosome CDS2245449 897 + 0.744705
NA BB0784 putative type II secretion system proteinchromosome CDS822584 1638 - 0.672161
NA BB0782 putative type II secretion system proteinchromosome CDS820271 1380 - 0.75942
NA BB3110 autotransporterchromosome CDS3315334 2313 - 0.680502
NA BB4902 putative bacterial secretion system proteinchromosome CDS5209423 1020 + 0.681373
NA BB2379 probable outer membrane efflux proteinchromosome CDS2533447 1488 - 0.756048
NA BB1822 putative membrane proteinchromosome CDS1927418 525 + 0.681905
NA BB4897 putative bacterial secretion system proteinchromosome CDS5202778 2475 + 0.639596
NA BB1694 phage-related Clp proteasechromosome CDS1787633 876 + 0.649543
NA BB1828 probable type II secretion system proteinchromosome CDS1932519 1356 + 0.679941
NA BB2333 putative C4-dicarboxylate transporterchromosome CDS2485289 1080 + 0.696296
bapB BB3292 autotransporterchromosome CDS3521978 1842 - 0.712812
bapC BB2033 putative autotransporterchromosome CDS2179242 2982 + 0.652247
bcrD BB1612 putative type III secretion pore proteinchromosome CDS1717772 2100 - 0.642857
bscC BB1637 putative type III secretion proteinchromosome CDS1736093 1803 + 0.663894
bscJ BB1625 putative type III secretion proteinchromosome CDS1727353 825 + 0.704242
bscL BB1627 putative type III secretion proteinchromosome CDS1728877 564 + 0.657801
bscN BB1628 putative ATP synthase in type III secretion systemchromosome CDS1729445 1335 + 0.628464
bscQ BB1631 putative type III secretion proteinchromosome CDS1731830 1080 + 0.694444
bscR BB1632 putative type III secretion proteinchromosome CDS1732906 672 + 0.619048
bscS BB1633 putative type III secretion proteinchromosome CDS1733574 276 + 0.586957
bscT BB1634 putative type III secretion proteinchromosome CDS1733861 801 + 0.630462
bscU BB1635 putative type III secretion proteinchromosome CDS1734658 1050 + 0.638095
clpP BB2254 ATP-dependent Clp protease proteolytic subunitchromosome CDS2382788 654 + 0.633027
cusC BB2529 probable outer membrane lipoproteinchromosome CDS2686315 1467 + 0.724608
cyaE BB0327 cyclolysin secretion proteinchromosome CDS340157 1425 + 0.738947
eha BB3648 phage-related conserved hypothetical proteinchromosome CDS3864510 1185 + 0.610127
exbB BB1981 MotA/TolQ/ExbB proton channel family proteinchromosome CDS2119156 978 + 0.689162
exbD BB1982 biopolymer transport protein ExbD/TolRchromosome CDS2120133 468 + 0.668803
ffh BB0506 signal recognition particle proteinchromosome CDS535704 1410 + 0.686525
fhaB BB2993 filamentous hemagglutinin/adhesinchromosome CDS3184702 10959 - 0.68008
fhaC BB2988 hemolysin activator-like proteinchromosome CDS3177238 1752 - 0.651256
fhaL BB1936 adhesinchromosome CDS2059374 12657 - 0.716916
fhaS BB2312 adhesinchromosome CDS2453379 9621 + 0.6913
fim2 BB3674 serotype 2 fimbrial subunit precursorchromosome CDS3893880 636 + 0.613208
fim3 BB1658 serotype 3 fimbrial subunit precursorchromosome CDS1760587 627 - 0.620415
fimA BB2992 fimbrial proteinchromosome CDS3183761 606 - 0.582508
fimB BB2991 chaperone proteinchromosome CDS3182777 825 - 0.673939
fimC BB2990 outer membrane usher protein precursorchromosome CDS3180093 2622 - 0.67315
fimD BB2989 fimbrial adhesinchromosome CDS3178982 1098 - 0.644809
fimN BB3425 fimbrial subunit proteinchromosome CDS3670074 627 + 0.637959
fimX BB3426 fimbrial proteinchromosome CDS3670933 606 + 0.620462
flgM BB2557 negative regulator of flagellin synthesischromosome CDS2720925 291 - 0.707904
flhA BB2554 flagellar biosynthesis protein FlhAchromosome CDS2715922 2118 + 0.684136
flhB BB2553 flagellar biosynthetic protein FlhBchromosome CDS2714764 1155 + 0.690909
fliE BB2589 flagellar hook-basal body complex protein FliEchromosome CDS2752637 333 + 0.675676
fliF BB2588 flagellar M-ring proteinchromosome CDS2750648 1677 - 0.689326
fliH BB2586 flagellar assembly protein FliHchromosome CDS2748900 756 - 0.748677
fliI BB2585 flagellum-specific ATP synthase FliIchromosome CDS2747428 1476 - 0.714092
fliJ BB2584 flagellar protein FliJchromosome CDS2746989 447 - 0.655481
fliN BB2580 flagellar motor switch proteinchromosome CDS2743402 519 - 0.703276
fliP BB2578 flagellar biosynthetic protein FliPchromosome CDS2742247 792 - 0.661616
fliQ BB2577 flagellar biosynthetic protein FliQchromosome CDS2741961 270 - 0.640741
fliR BB2576 flagellar biosynthetic proteinchromosome CDS2741150 789 - 0.675539
fliS BB2594 flagellar protein FliSchromosome CDS2755365 429 - 0.67366
ftsY BB0943 cell division proteinchromosome CDS1019501 1068 + 0.714419
gspO BB0792 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS830131 828 + 0.771739
lep BB3747 signal peptidase Ichromosome CDS3970297 885 - 0.59548
lspA BB2171 lipoprotein signal peptidasechromosome CDS2316595 507 - 0.680473
mar BB3901 possible membrane efflux proteinchromosome CDS4146440 660 + 0.665152
marC BB3127 putative multiple antibiotic resistance proteinchromosome CDS3336909 702 + 0.679487
marC BB2602 putative multiple antibiotic resistance proteinchromosome CDS2762998 714 - 0.659664
phg BB2246 autotransporterchromosome CDS2376943 1248 + 0.692308
pilT BB0791 twitching mobility proteinchromosome CDS828844 1041 - 0.679155
prn BB1366 pertactin precursorchromosome CDS1461346 2751 + 0.716103
ptlB BB4896 pertussis toxin transport proteinchromosome CDS5202467 315 + 0.644444
secA BB4189 preprotein translocase secA subunitchromosome CDS4451341 2736 - 0.65095
secB BB0295 protein-export proteinchromosome CDS298787 528 - 0.655303
secD BB1360 protein-export membrane proteinchromosome CDS1453718 1881 - 0.681552
secE BB0008 preprotein translocase SecE subunitchromosome CDS8136 381 + 0.587927
secF BB1359 protein-export membrane proteinchromosome CDS1452733 936 - 0.633547
secG BB3875 protein-export membrane proteinchromosome CDS4114691 465 - 0.71828
secY BB0051 preprotein translocase SecY subunitchromosome CDS46532 1326 + 0.607843
smf BB0244 conserved hypothetical proteinchromosome CDS248017 1113 - 0.751123
tatB BB4864 Sec-independent protein translocase proteinchromosome CDS5175446 423 + 0.695035
tatC BB4865 putative Sec-independent protein translocase proteinchromosome CDS5175865 801 + 0.661673
tatE BB4863 Sec-independent protein translocase proteinchromosome CDS5175119 228 + 0.587719
vag8 BB1864 autotransporterchromosome CDS1979287 2748 + 0.681951
virB6 BB0488 plasmid-related membrane proteinchromosome CDS519095 1053 - 0.533713
virD2 BB0493 plasmid-related proteinchromosome CDS522129 996 - 0.60241