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2024-04-29 01:58:36

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Bordetella pertussis, Tohama I

Number of genes found: 91

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bordetella pertussis, Tohama I
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BP3345 putative TolR-like translocation proteinchromosome CDS3568106 459 - 0.668845
NA BP1996 putative type II secretion system proteinchromosome CDS2106825 1350 + 0.702222
NA BP1989 putative exported proteinchromosome CDS2101094 1713 - 0.66258
NA BP1995 putative membrane proteinchromosome CDS2105828 942 + 0.727176
NA BP2525 putative membrane proteinchromosome CDS2675405 846 - 0.728132
NA BP2527 putative secretory proteinchromosome CDS2679270 846 - 0.729314
NA BP0826 outer membrane component of multidrug efflux systemchromosome CDS853491 1494 - 0.733601
NA BP2764 putative biopolymer transport proteinchromosome CDS2941959 621 + 0.702093
NA BP3794 putative bacterial secretion system proteinchromosome CDS3996805 822 + 0.667883
NA BP1485 putative membrane proteinchromosome CDS1562459 1584 + 0.75505
NA BP1344 autotransporterchromosome CDS1414969 2601 + 0.725106
NA BP3795 putative bacterial secretion system proteinchromosome CDS3997607 1125 + 0.698667
NA BP1999 putative membrane proteinchromosome CDS2110879 921 + 0.710098
NA BP0529 autotransporterchromosome CDS532218 6723 + 0.70772
NA BP3790 putative bacterial secretion system proteinchromosome CDS3992073 2475 + 0.639192
NA BP3343 putative TolB-like translocation proteinchromosome CDS3565762 1317 - 0.659074
NA BP1188 hypothetical proteinchromosome CDS1251169 885 + 0.715254
NA BP3796 putative bacterial secretion system proteinchromosome CDS3998724 1020 + 0.679412
NA BP3812 putative outer membrane efflux proteinchromosome CDS4015874 1485 - 0.736027
NA BP2001 putative lipoproteinchromosome CDS2112793 843 + 0.734282
NA BP3818 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS4026411 981 - 0.722732
NA BP0205 putative exported proteinchromosome CDS208886 567 - 0.687831
NA BP1047 putative secreted proteinchromosome CDS1090336 345 - 0.611594
NA BP3793 putative bacterial secretion system proteinchromosome CDS3996107 702 + 0.668091
NA BP1993 putative exported proteinchromosome CDS2104910 444 + 0.754505
NA BP2765 putative biopolymer transport proteinchromosome CDS2942576 414 + 0.683575
NA BP2526 putative secretory apparatuschromosome CDS2677861 1413 - 0.716914
NA BP0495 probable inner-membrane proteinchromosome CDS507297 1692 + 0.654846
NA BP1997 conserved hypothetical proteinchromosome CDS2108171 1350 + 0.706667
NA BP3346 putative TolQ-like translocation proteinchromosome CDS3568564 681 - 0.660793
NA BP1992 putative membrane proteinchromosome CDS2104425 525 + 0.68381
bapA BP2224 putative autotransporterchromosome CDS2347938 2712 - 0.671091
bapC BP2738 autotransporter (pseudogene)chromosome CDS2905291 2987 - 0.65149
bcrD BP2261 putative type III secretion pore proteinchromosome CDS2381718 2100 + 0.641429
brkA BP3494 serum resistance proteinchromosome CDS3703057 3033 + 0.720409
bscC BP2235 putative type III secretion proteinchromosome CDS2363716 1803 - 0.663339
bscJ BP2248 putative type III secretion proteinchromosome CDS2373434 825 - 0.704242
bscL BP2246 putative type III secretion proteinchromosome CDS2372171 639 - 0.661972
bscN BP2245 putative ATP synthase in type III secretion systemchromosome CDS2370832 1335 - 0.633708
bscQ BP2241 putative type III secretion proteinchromosome CDS2368702 1080 - 0.701852
bscR BP2240 putative type III secretion proteinchromosome CDS2368034 672 - 0.622024
bscS BP2239 putative type III secretion proteinchromosome CDS2367762 267 - 0.58427
bscT BP2238 putative type III secretion proteinchromosome CDS2366950 801 - 0.627965
bscU BP2237 putative type III secretion proteinchromosome CDS2365904 1050 - 0.639048
clpP BP1775 ATP-dependent Clp protease proteolytic subunitchromosome CDS1864621 654 + 0.633027
cusC BP0986 probable outer membrane lipoproteinchromosome CDS1025638 1383 + 0.723789
cyaE BP0763 cyclolysin secretion proteinchromosome CDS784885 1425 + 0.736842
exbB BP3532 MotA/TolQ/ExbB proton channel family proteinchromosome CDS3743708 978 + 0.682004
exbD BP3533 biopolymer transport protein ExbD/TolRchromosome CDS3744685 468 + 0.668803
ffh BP0079 signal recognition particle proteinchromosome CDS76229 1410 + 0.685816
fhaB BP1879 filamentous hemagglutinin/adhesinchromosome CDS1968781 10773 + 0.675485
fhaC BP1884 hemolysin activator-like proteinchromosome CDS1984838 1755 + 0.651852
fhaL BP2907 adhesinchromosome CDS3085865 12591 + 0.717179
fhaS BP2667 adhesinchromosome CDS2822059 7662 - 0.716784
fim2 BP1119 serotype 2 fimbrial subunit precursorchromosome CDS1175853 633 - 0.612954
fim3 BP1568 serotype 3 fimbrial subunit precursorchromosome CDS1647602 615 + 0.611382
fimB BP1881 chaperone proteinchromosome CDS1980316 735 + 0.684354
fimC BP1882 outer membrane usher protein precursorchromosome CDS1981113 2622 + 0.672769
fimX BP2674 fimbrial proteinchromosome CDS2839779 606 + 0.623762
flgM BP1371 negative regulator of flagellin synthesischromosome CDS1447927 291 - 0.704467
flhB BP1366 flagellar biosynthetic protein FlhBchromosome CDS1441767 1155 + 0.692641
fliE BP1404 flagellar hook-basal body complex protein FliEchromosome CDS1479133 333 + 0.666667
fliF BP1403 flagellar M-ring protein FliFchromosome CDS1477144 1677 - 0.68873
fliH BP1401 flagellar assembly protein FliHchromosome CDS1475396 756 - 0.748677
fliI BP1400 flagellum-specific ATP synthase FliIchromosome CDS1473924 1434 - 0.711297
fliJ BP1399 flagellar protein FliJchromosome CDS1473485 447 - 0.651007
fliN BP1393 flagellar motor switch protein FliNchromosome CDS1468885 501 - 0.692615
fliP BP1391 flagellar biosynthetic protein FliPchromosome CDS1467730 735 - 0.662585
fliQ BP1390 flagellar biosynthetic protein FliQchromosome CDS1467444 270 - 0.644444
fliR BP1389 flagellar biosynthetic protein FliRchromosome CDS1466633 789 - 0.671736
fliS BP1409 flagellar protein FliSchromosome CDS1481877 429 - 0.666667
ftsY BP3473 cell division proteinchromosome CDS3685305 1110 + 0.706306
lep BP2432 signal peptidase Ichromosome CDS2574220 885 - 0.59209
lspA BP1752 lipoprotein signal peptidasechromosome CDS1837100 507 - 0.684418
mar BP2464 possible membrane efflux proteinchromosome CDS2608636 660 + 0.666667
phg BP1767 autotransporterchromosome CDS1858759 1257 + 0.695306
prn BP1054 pertactin precursorchromosome CDS1098091 2733 + 0.712038
ptlB BP3789 pertussis toxin transport proteinchromosome CDS3991762 315 + 0.650794
secA BP3014 preprotein translocase secA subunitchromosome CDS3204030 2736 - 0.649854
secB BP0604 protein-export proteinchromosome CDS610071 528 - 0.655303
secD BP1046 protein-export membrane proteinchromosome CDS1088389 1881 - 0.681021
secE BP0008 preprotein translocase SecE subunitchromosome CDS8151 381 + 0.587927
secF BP1045 protein-export membrane proteinchromosome CDS1087404 936 - 0.632479
secG BP0802 protein-export membrane proteinchromosome CDS825086 447 + 0.697987
secY BP3636 preprotein translocase SecY subunitchromosome CDS3842779 1326 + 0.607089
smf BP0555 conserved hypothetical proteinchromosome CDS561604 1113 + 0.753819
tatB BP3778 Sec-independent protein translocase proteinchromosome CDS3984989 444 + 0.677928
tatC BP3779 putative Sec-independent protein translocase proteinchromosome CDS3985429 801 + 0.661673
tatE BP3777 Sec-independent protein translocase proteinchromosome CDS3984689 228 + 0.587719
tcfA BP1201 tracheal colonization factor precursorchromosome CDS1264436 1944 + 0.695988
vag8 BP2315 autotransporterchromosome CDS2438781 2748 - 0.678312