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2024-05-08 22:17:10

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Vibrio cholerae O1 biovar eltor str. N16961, N16961

Number of genes found: 101

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VC0004 inner membrane protein, 60 kDachromosome I CDS2271 1626 - 0.492005
VC0048 smf proteinchromosome I CDS46075 1116 + 0.513441
VC0086 tatA proteinchromosome I CDS84768 249 + 0.445783
VC0087 conserved hypothetical proteinchromosome I CDS85020 402 + 0.529851
VC0088 conserved hypothetical proteinchromosome I CDS85510 753 + 0.484728
VC0147 cell division protein FtsYchromosome I CDS136954 1176 + 0.496599
VC0322 preprotein translocase, SecE subunitchromosome I CDS336719 396 + 0.484848
VC0400 MSHA biogenesis protein MshJchromosome I CDS426732 651 + 0.483871
VC0402 MSHA biogenesis protein MshLchromosome I CDS427707 1680 + 0.477381
VC0403 MSHA biogenesis protein MshMchromosome I CDS429391 846 + 0.5
VC0405 MSHA biogenesis protein MshEchromosome I CDS431374 1728 + 0.500579
VC0406 MSHA biogenesis protein MshGchromosome I CDS433110 1224 + 0.489379
VC0409 MSHA pilin protein MshAchromosome I CDS435449 537 + 0.430168
VC0414 hypothetical proteinchromosome I CDS438229 3759 + 0.458101
VC0462 twitching motility protein PilTchromosome I CDS491296 1038 + 0.487476
VC0463 twitching motility protein PilTchromosome I CDS492348 1107 + 0.507678
VC0560 signal recognition particle proteinchromosome I CDS594665 1386 + 0.5
VC0640 preprotein translocase, SecG subunitchromosome I CDS682585 336 + 0.452381
VC0683 lipoprotein signal peptidasechromosome I CDS731552 516 + 0.492248
VC0742 conserved hypothetical proteinchromosome I CDS795485 333 + 0.456456
VC0743 protein-export membrane protein SecDchromosome I CDS795839 1854 + 0.499461
VC0744 protein-export membrane protein SecFchromosome I CDS797707 948 + 0.492616
VC0828 toxin co-regulated pilinchromosome I CDS890449 675 + 0.432593
VC0831 toxin co-regulated pilus biosynthesis outer membrane protein Cchromosome I CDS892950 1470 + 0.357143
VC0835 toxin co-regulated pilus biosynthesis protein Tchromosome I CDS896155 1512 + 0.361772
VC0836 toxin co-regulated pilus biosynthesis protein Echromosome I CDS897641 1023 + 0.355816
VC0839 leader peptidase TcpJchromosome I CDS900726 762 + 0.314961
VC0857 fimbrial assembly protein PilE, putativechromosome I CDS923726 444 - 0.439189
VC0858 type IV pilin, putativechromosome I CDS924224 555 + 0.427027
VC0861 type IV pilin, putativechromosome I CDS926571 414 + 0.451691
VC0930 hemolysin-related proteinchromosome I CDS993628 2874 + 0.47112
VC0975 conserved hypothetical proteinchromosome I CDS1040356 570 - 0.482456
VC1060 sohB protein, peptidase U7 familychromosome I CDS1127705 1071 + 0.490196
VC1409 multidrug resistance protein, putativechromosome I CDS1501627 1455 + 0.48866
VC1451 RTX toxin RtxAchromosome I CDS1550108 13677 + 0.486656
VC1485 hypothetical proteinchromosome I CDS1589366 1695 - 0.457227
VC1545 TonB system transport protein ExbD2chromosome I CDS1657857 405 - 0.501235
VC1546 TonB system transport protein ExbB2chromosome I CDS1658258 543 - 0.497238
VC1547 biopolymer transport protein ExbB-related proteinchromosome I CDS1658807 1374 - 0.508734
VC1565 outer membrane protein TolC, putativechromosome I CDS1676745 1260 + 0.490476
VC1606 conserved hypothetical proteinchromosome I CDS1720423 1431 + 0.480783
VC1612 fimbrial biogenesis and twitching motility protein, putativechromosome I CDS1726820 714 + 0.459384
VC1621 agglutination proteinchromosome I CDS1741764 1338 + 0.462631
VC1798 eha proteinchromosome I CDS1943306 1152 - 0.445312
VC1836 tolB proteinchromosome I CDS1977120 1353 - 0.453806
VC1838 tolR membrane proteinchromosome I CDS1979575 441 - 0.430839
VC1839 tolQ proteinchromosome I CDS1980018 684 - 0.461988
VC1922 ATP-dependent Clp protease, proteolytic subunitchromosome I CDS2073209 603 - 0.464345
VC1994 protease IVchromosome I CDS2147068 1851 + 0.488925
VC2035 conserved hypothetical proteinchromosome I CDS2190929 639 + 0.485133
VC2054 heme exporter protein Dchromosome I CDS2210947 207 - 0.463768
VC2060 conserved hypothetical proteinchromosome I CDS2214670 1017 - 0.468043
VC2069 flagellar biosynthetic protein FlhAchromosome I CDS2224331 2094 - 0.499522
VC2120 flagellar biosynthetic protein FlhBchromosome I CDS2275104 1131 - 0.504863
VC2121 flagellar biosynthetic protein FliRchromosome I CDS2276244 783 - 0.498084
VC2122 flagellar biosynthetic protein FliQchromosome I CDS2277035 270 - 0.451852
VC2123 flagellar biosynthetic protein FliPchromosome I CDS2277317 900 - 0.478889
VC2125 flagellar motor switch protein FliNchromosome I CDS2278587 417 - 0.505995
VC2129 flagellar protein FliJ, putativechromosome I CDS2282851 495 - 0.460606
VC2130 flagellum-specific ATP synthase FliIchromosome I CDS2283309 1320 - 0.52803
VC2131 flagellar assembly protein FliH, putativechromosome I CDS2284632 813 - 0.522755
VC2133 flagellar M-ring protein FliFchromosome I CDS2286564 1743 - 0.503729
VC2134 flagellar hook-basal body complex protein FliEchromosome I CDS2288322 330 - 0.454545
VC2138 flagellar protein FliSchromosome I CDS2293010 411 - 0.462287
VC2141 flagellin FlaGchromosome I CDS2295760 462 - 0.484848
VC2204 negative regulator of flagellin synthesis FlgM, putativechromosome I CDS2349941 324 + 0.490741
VC2205 hypothetical proteinchromosome I CDS2350362 432 + 0.449074
VC2394 preprotein translocase, SecA subunitchromosome I CDS2560390 2712 - 0.489676
VC2423 fimbrial proteinchromosome I CDS2597151 504 + 0.39881
VC2424 type IV pilus assembly protein PilBchromosome I CDS2597654 1689 + 0.528123
VC2425 type IV pilin biogenesis protein PilCchromosome I CDS2599385 1227 + 0.490628
VC2426 leader peptidase PilDchromosome I CDS2600669 876 + 0.515982
VC2436 outer membrane protein TolCchromosome I CDS2610550 1317 + 0.487472
VC2445 general secretion pathway protein Achromosome I CDS2623621 1590 - 0.520126
VC2462 signal peptidase Ichromosome I CDS2644199 897 - 0.491639
VC2576 preprotein translocase, SecY subunitchromosome I CDS2754257 1335 - 0.45618
VC2627 DamX-related proteinchromosome I CDS2797815 1476 - 0.484417
VC2630 fimbrial assembly proteinchromosome I CDS2801169 1737 - 0.468624
VC2631 fimbrial assembly protein PilP, putativechromosome I CDS2802910 519 - 0.491329
VC2632 fimbrial assembly protein PilO, putativechromosome I CDS2803418 600 - 0.495
VC2633 fimbrial assembly protein PilN, putativechromosome I CDS2804001 591 - 0.472081
VC2634 fimbrial assembly protein PilM, putativechromosome I CDS2804575 1017 - 0.471976
VC2653 protein-transport protein SecBchromosome I CDS2824274 465 - 0.496774
VC2691 periplasmic protein cpxP, putativechromosome I CDS2859114 504 - 0.513889
VC2724 cholera toxin secretion protein EpsMchromosome I CDS2897667 501 - 0.528942
VC2725 general secretion pathway protein Lchromosome I CDS2898174 1224 - 0.511438
VC2726 general secretion pathway protein Kchromosome I CDS2899354 1011 - 0.522255
VC2727 general secretion pathway protein Jchromosome I CDS2900354 666 - 0.522523
VC2728 general secretion pathway protein Ichromosome I CDS2901006 354 - 0.522599
VC2729 general secretion pathway protein Hchromosome I CDS2901349 585 - 0.511111
VC2730 general secretion pathway protein Gchromosome I CDS2901967 441 - 0.478458
VC2731 general secretion pathway protein Fchromosome I CDS2902448 1221 - 0.532351
VC2732 general secretion pathway protein Echromosome I CDS2903668 1512 - 0.525794
VC2734 general secretion pathway protein Cchromosome I CDS2907245 918 - 0.496732
VCA0533 tatA proteinchromosome II CDS471368 237 + 0.489451
VCA0628 SecA-related proteinchromosome II CDS563793 2175 + 0.324138
VCA0693 protein-export membrane protein SecDchromosome II CDS631637 1839 - 0.479608
VCA0849 hypothetical proteinchromosome II CDS791029 9792 - 0.501225
VCA0863 lipase, putativechromosome II CDS813130 2391 + 0.491844
VCA0911 TonB system transport protein ExbB1chromosome II CDS866440 687 + 0.531295
VCA0912 TonB system transport protein ExbD1chromosome II CDS867123 417 + 0.477218