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2024-05-03 13:37:22

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Bradyrhizobium japonicum USDA 110, USDA110

Number of genes found: 147

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bradyrhizobium japonicum USDA 110, USDA110
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
bll0044 chromosome CDS39329 1875 - 0.6656
bll0473 chromosome CDS512528 948 - 0.664557
bll0666 chromosome CDS711413 1518 - 0.670619
bll3046 chromosome CDS3363771 1371 - 0.682713
bll3563 chromosome CDS3930196 10326 - 0.634418
bll3709 chromosome CDS4100479 657 - 0.660578
bll3710 chromosome CDS4101099 1053 - 0.665717
bll3714 chromosome CDS4106955 12387 - 0.644385
bll4321 chromosome CDS4772956 1563 - 0.666027
bll4736 preprotein tranlocase proteinchromosome CDS5244797 378 - 0.632275
bll4750 chromosome CDS5260537 528 - 0.638258
bll4924 chromosome CDS5459017 966 - 0.610766
bll5628 prokaryotic type I signal peptidasechromosome CDS6188854 747 - 0.64257
bll6015 chromosome CDS6619108 1104 - 0.685688
bll6016 chromosome CDS6620147 915 - 0.676503
bll6018 chromosome CDS6622162 495 - 0.70303
bll6019 chromosome CDS6622619 453 - 0.644592
bll6020 chromosome CDS6623119 1212 - 0.685644
bll6021 general secretion pathway protein Echromosome CDS6624549 1713 - 0.67951
bll6025 chromosome CDS6630315 969 - 0.611971
bll6171 chromosome CDS6790682 627 - 0.692185
bll6847 chromosome CDS7543887 459 - 0.620915
bll7749 chromosome CDS8499498 444 - 0.662162
bll7792 chromosome CDS8539008 3630 - 0.611019
bll7924 chromosome CDS8690537 8205 - 0.648629
bll8250 chromosome CDS9042366 1407 - 0.617626
blr0741 proteinase IVchromosome CDS790217 981 + 0.650357
blr1444 chromosome CDS1575956 498 + 0.662651
blr1806 chromosome CDS1960808 1455 + 0.578007
blr2058 chromosome CDS2218824 897 + 0.544036
blr2130 chromosome CDS2304351 321 + 0.632399
blr2728 chromosome CDS2998612 1560 + 0.68141
blr3252 chromosome CDS3592327 17058 + 0.658166
blr3253 chromosome CDS3609389 1686 + 0.625741
blr3491 chromosome CDS3861907 516 + 0.589147
blr3492 chromosome CDS3862388 990 + 0.60202
blr3494 component of type IV piluschromosome CDS3864576 1377 + 0.594045
blr3495 chromosome CDS3865865 1017 + 0.583088
blr3496 chromosome CDS3866878 909 + 0.567657
blr3499 chromosome CDS3870308 420 + 0.602381
blr3500 chromosome CDS3871115 1653 + 0.632789
blr3697 chromosome CDS4088424 423 + 0.671395
blr3907 biopolymer transport proteinchromosome CDS4337617 465 + 0.63871
blr3943 chromosome CDS4376682 660 + 0.618182
blr4055 chromosome CDS4485242 696 + 0.597701
blr4098 chromosome CDS4529422 396 + 0.527778
blr4325 chromosome CDS4777746 3840 + 0.665104
blr4455 chromosome CDS4925998 1485 + 0.66734
blr4473 chromosome CDS4951622 1392 + 0.647988
blr4709 chromosome CDS5215208 2064 + 0.569767
blr4935 chromosome CDS5470876 1275 + 0.693333
blr5446 chromosome CDS5990055 1110 + 0.665766
blr5447 chromosome CDS5990914 1119 + 0.670241
blr5467 chromosome CDS6010899 1719 + 0.621873
blr5534 chromosome CDS6092792 432 + 0.615741
blr5538 chromosome CDS6097282 2289 + 0.654434
blr5698 chromosome CDS6264555 1083 + 0.66759
blr5987 chromosome CDS6584305 2511 + 0.613301
blr6022 chromosome CDS6626390 2382 + 0.667926
blr6126 chromosome CDS6741503 1797 + 0.647746
blr6643 chromosome CDS7318099 1569 + 0.676227
blr7001 chromosome CDS7710350 621 + 0.692432
blr7482 chromosome CDS8218739 558 + 0.655914
blr8098 chromosome CDS8890344 1851 + 0.628309
bsl3118 chromosome CDS3443199 165 - 0.569697
bsl4751 chromosome CDS5261154 234 - 0.628205
bsl4812 chromosome CDS5331642 210 - 0.571429
bsl5256 chromosome CDS5805759 243 - 0.62963
bsr2129 chromosome CDS2304035 207 + 0.637681
clpP ATP-dependent protease proteolytic subunitchromosome CDS654336 603 + 0.61194
clpP ATP-dependent Clp protease proteolytic subunitchromosome CDS5485552 636 - 0.628931
copB copper tolerance proteinchromosome CDS2388931 1425 - 0.670175
ctpA pilus assembly protein pilin subunitchromosome CDS1574544 165 - 0.587879
ctpA components of type IV pilus pilin subunitchromosome CDS7862238 237 - 0.578059
ctpB pilus assembly protein prepilin peptidase subunitchromosome CDS1573680 525 - 0.664762
ctpC pilus assembly proteinchromosome CDS1572752 810 - 0.667901
ctpC CtpC proteinchromosome CDS712941 813 - 0.671587
ctpD pilus assembly proteinchromosome CDS1571265 1491 - 0.657948
ctpF pilus assembly proteinchromosome CDS1569245 1269 - 0.660362
ctpG pilus assembly proteinchromosome CDS1567760 1464 - 0.665301
ctpH pilus assembly proteinchromosome CDS1566766 1023 - 0.652981
ctpI pilus assemble proteinchromosome CDS1565782 975 - 0.626667
exbB biopolymer transport proteinchromosome CDS7789292 786 - 0.693384
exbB biopolymer transport proteinchromosome CDS4336633 981 + 0.69317
exbD biopolymer transport proteinchromosome CDS7788842 447 - 0.666667
ffh signal recognition particle proteinchromosome CDS521006 1893 + 0.661384
flhA flagellar biosynthesis proteinchromosome CDS7546548 2082 - 0.652738
flhA flagellar biosynthesis proteinchromosome CDS2384305 2244 - 0.670232
flhB flagellar biosynthetic proteinchromosome CDS6375374 1080 - 0.641667
flhB flagellar biosynthetic proteinchromosome CDS7569953 1086 - 0.642726
fliE flagellar hook-basal body complex proteinchromosome CDS6377630 309 - 0.656958
fliE flagellar hook-basal body complex proteinchromosome CDS7568726 330 - 0.675758
fliF flagellar M-ring proteinchromosome CDS7559187 1662 - 0.646209
fliF chromosome CDS7707682 1560 + 0.670513
fliI flagellum-specific ATP synthasechromosome CDS2377131 1326 + 0.670437
fliI flagellum-specific ATP synthasechromosome CDS7576561 1140 + 0.683333
fliN chromosome CDS7572095 375 - 0.650667
fliN flagellar motor switch proteinchromosome CDS7710974 351 + 0.672365
fliP flagellar biosynthetic proteinchromosome CDS7563549 741 - 0.611336
fliP flagellar biosynthetic proteinchromosome CDS6380153 753 + 0.645418
fliQ flagellar biosynthetic proteinchromosome CDS7548708 267 - 0.614232
fliQ flagellar biosynthetic proteinchromosome CDS6377249 264 - 0.632576
fliR chromosome CDS7545799 753 - 0.64409
fliR flagellar biosynthetic proteinchromosome CDS6376461 771 - 0.656291
nolV nodulation proteinchromosome CDS1968299 621 + 0.618357
pilA components of type IV pilus pilin subunitchromosome CDS7253381 156 - 0.532051
pilA2 pilus assembly proteinchromosome CDS1692390 162 + 0.481481
prlA preprotein translocase SECY subunitchromosome CDS5925805 1332 - 0.627628
rhcC1 RhcC1 proteinchromosome CDS1965405 714 - 0.589636
rhcC2 RhcC2 proteinchromosome CDS1995366 1293 - 0.603248
rhcJ RhcJ proteinchromosome CDS1966789 864 + 0.584491
rhcN RhcN proteinchromosome CDS1968916 1356 + 0.619469
rhcR RhcR proteinchromosome CDS1971894 666 + 0.525526
rhcT RhcT proteinchromosome CDS1972848 822 + 0.569343
rhcU RhcU proteinchromosome CDS1973666 1038 + 0.596339
rhcV RhcV proteinchromosome CDS1955237 2100 - 0.569524
secA preprotein translocase SecA subunitchromosome CDS198903 2841 - 0.649419
secB protein-export proteinchromosome CDS687982 486 - 0.62963
secD protein-export membrane proteinchromosome CDS5243145 1605 - 0.662305
secE preprotein translocasechromosome CDS5960786 192 - 0.578125
secF protein-export membrane proteinchromosome CDS5242115 1020 - 0.636275
secG protein-export membrane proteinchromosome CDS5325846 390 - 0.679487
sipF prokaryotic type I signal peptidasechromosome CDS5616318 765 - 0.616993
sipS signal peptidasechromosome CDS1285543 780 - 0.682051
smf DNA processing proteinchromosome CDS5661395 1143 + 0.709536
sohB proteinasechromosome CDS2768524 909 + 0.672167
tatC SEC-independent protein translocase proteinchromosome CDS5259728 813 - 0.627306
tolB tolB proteinchromosome CDS7875142 1476 - 0.643631
tolC chromosome CDS3351897 1431 - 0.691125
tolQ tolQ Proteinchromosome CDS7877986 717 - 0.640167
tolR tolR proteinchromosome CDS7877493 450 - 0.64
traF conjugal transfer protein precursorchromosome CDS42820 546 - 0.664835
traG conjugal transfer proteinchromosome CDS37305 2028 - 0.636095
trbB conjugal transfer proteinchromosome CDS9076555 999 - 0.694695
trbC chromosome CDS9076217 342 - 0.631579
trbD chromosome CDS9075942 279 - 0.688172
trbE chromosome CDS9073496 2439 - 0.647396
trbF chromosome CDS1774921 684 + 0.589181
trbF chromosome CDS9070359 690 - 0.646377
trbG conjugal transfer proteinchromosome CDS1859226 1299 - 0.613549
trbG chromosome CDS9069283 1080 - 0.626852
trbG conjugal transfer proteinchromosome CDS1775679 957 + 0.61651
trbI chromosome CDS9068090 1203 - 0.665004
trbI conjugal transfer proteinchromosome CDS1776632 1203 + 0.611804
trbJ chromosome CDS9072741 759 - 0.617918
trbL conjugal transfer proteinchromosome CDS1773989 840 + 0.647619
trbL chromosome CDS9071052 1362 - 0.651248