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# Chlamydophila pneumoniae AR39, AR39

>gid:24732  CP0039  type III secretion cytoplasmic ATPase SctN
MDQLTTDFDTLMSQLGDVNLTTVVGRITEVVGMLIKAVVPNVRVGEVCLV
KRNGMEPLVTEVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLHIRAGN
GLLGRVLNGLGEPIDVETKGPLQNVDQTFPIFRAPPDPLHRAKLRQILST
GVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIARNAEEADVNVIALIG
ERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEYF
RDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLE
RSGASDKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYH
YPAIDVLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRR
GSDREIDFAIDHIDKLNRFLKQDIHEKTNYEEAAQQLRAIFR
>gid:24735  CP0042  type III secretion translocase SctQ
MAVAADSSASWLKSRNNFLSSLGKTEEQVAAPEFPKELCQHKIREKFRLE
DVQVSIKFRGSITAVEATKEFGVHLLIQPMVVQPWEVENLLFLTSEEDLQ
ELMVAVFDDASLASYFYEKDKLLGFHYYFVAEACKLFEELQWVPSLSAKV
GGDAIFTATSLQGSFQVVDISLRLDGKNVRCRLLLPEDTFQSCQKFFSGL
HDESDLHNIDQTQQISLSVEVGYSQLTQEEWHQVVPGSFIMLDSCLYDPE
TEESGALLTVQKHQFFGGRFLTPSSGEFKITSYPNLTHEDPPLPENPQAS
AAPLPGYSRLVVEVARYSLAVSEFIKLNLGSILSLGNHPAYGVDIILDGA
KVGRGEIIALGDVLGIRVLEV
>gid:24737  CP0044  type III secretion protein SctC
MKTVILNIGRKILQGIKKKKKKIGILSGLFFLDLVLLGVSSQRPTETSAN
VKHNLRDEKLAACPKNSAASLSAKKSHTKKTTPGSIPSKVFSKFDATQDK
TFQKTSGSAFPAKPTTLKELEERKKPRPERRTTADVKRSPRFLPTQEVEE
PVPAASKEQLDSIQVWEEKQNYARRAVNAINLSIKKQLEEQTSTVTEKDV
QPKTQATPHASKKNVASPSTSMPGIEKAATTVAVPQDKSEEEKVKERLTK
RELTCEDLKDNGYTVNFEDISILELLQFVSKISGTNFVFDSNDLQFNVTI
VSHDPTSVDDLSTILLQVLKMHDLKVVEQGNNVLIYRNPHLSKLSTVVTD
SSLKETCEAVVVTRVFRLYSVSPSAAVNIIQPLLSHDAIVSASEATRHVI
ISDIAGNVDKVSDLLAALDCPGTSVDMTEYEVKYANPAALVSYCQDVLGT
LAEDDAFQMFIQPGTNKIFVVSSPRLANKAEQLLKSLDVPEMAHTLDDPA
STALALGGTGTTSPKSLRFFMYKLKYQNGEVIANALQDIGYNLYVTTAMD
EDFINTLNSIQWLEVNNSIVIIGNQGNVDRVIGLLNGLDLPPKQVYIEVL
ILDTSLEKSWDFGVQWVALGDEQSKVAYASGLLNNTGIATPTKATVPPGT
PNPGSIPLPTPGQLTGFSDMLNSSSAFGLGIIGNVLSHKGKSFLTLGGLL
SALDQDGDTVIVLNPRIMAQDTQQASFFVGQTVPYQTTNTIIQETGTVTQ
NIDYEDIGVNLVVTSTVAPNNVVTLQIEQTISELHSASGSLTPVTDKTYA
ATRLQIPDGCFLVMSGHIRDKTTKVVSGVPLLNSIPLIRGLFSRTIDQRQ
KRNIMMFIKPKVISSFEEGTRVTNKEGYRYNWEADEGSMQVAPRHAPECQ
GPPSLQAESDFKIIEIEAQ
>gid:24816  CP0118  preprotein translocase SecY subunit
MFRPYMTTLRQFFLITELRQKLFYTFALLTACRVGVFIPVPGINGELAVA
YFKQLLGSGQNLFQLADIFSGGAFAQMTVIALGVVPYISASIIVQLFLVF
MPALQREMRESSDQGKRRIGRLTRLFTVALAVIQSLLFAKFALRMNLTIP
GIVLPTLLSSKLFGVPWIFYITTVVVMTTGTLLLMWIGEQISDKGIGNGI
SLIIALGILSSFPSVLGSIVNKLNLGSQDSSDLGLISILILALVFVFVLI
TTILIIEGVRKIPVQYARRVIGRREVPGGGSYLPLKVNYAGVIPVIFASS
LLMFPATIGQFIASESSWMKRIAALLAPGSLVYSICYVLLIIFFTYFWTA
TQFHPEQIASEMKKNNAFIPGIRQGKPTQHYLEYTMNRVTLLGALFLAAI
AILPSLLGCLLRVDSNVSYFLGGTAMLIVVGVVLDTMKQVDAFLLMRRYD
SVLKTDRTKGRH
>gid:24834  CP0134  protease IV, putative
MKTLWHFVSKAFLSIVGLCCGVVLAFVVIFALIASSLGNGDATFVSLPDA
QGEVKDLGKTAPIIAVIEMKDVIASSKNTAKTIQNILEGFEKAPLKDRVK
GIVIDMDCPGGEVFEIDRIYSMLRFWKERKGFPIYIYVNGLCASGGYYVS
CAATKIYATSSSLIGSIGVRSGPFFNVKEGLNRYGVESDLLTAGKDKAPM
NPYTPWTSHDREERQATLDFLYGQFVDIVTQNRPLLTKEKLVHTLGARIF
SPEKAKQEGYIDVVGATKEQVLQDIVAVCKIEDNYRVIGSGGDGWWKRVA
SAAASSPLVTGMIKHDILPLSHDAAYIPPYLAL
>gid:24888  CP0186  secDF protein, putative
MKQKVKRNFAIIICVFALALYYVLPTCLYYAKPLDKKIDGNEAEHIIKSF
TKQAQQVRKDVIPRVSAILSSLHLRGHIQQHPAIPDIVSVRFKRGEDAED
FIGNLVHGEPNVPIKSARLHVVGYSREHDDHVIQVASSINTSLVESDFSF
VSYSSENEQEMASSILQRVYSACTFPKQKDCSCSYPSIWETAPKEQLLQY
AKNLSSGFEVFSSRLSAFCQQSFSSNQDRLAFLSRLSSLSNDAAIDVEDQ
KLLKSVYETLSQTACIRSLDCPYIEGLRLDCSESSLFFSSIEYCPKERKI
FLTLHSDLLAQRTSLSKEQRLDFDSRLAVEKQKLSKNLTVQVEDYNNGFS
FQWMDKDTQGKIILQGERLLQGIAEHLTALTLHRPAAESCDLIPENFPVF
CRQPRESEAFGCYIFSPNTDCKHFSKGSVYILLKGLRSIVAKYQQGGGKE
LQSFEKDLQNLYNCFSHTEAISWTLGEDQVLEIRHPLQQFLDVWGEGFVI
GKEGCAFLEVKDIQDRLATVNQIEKNRQSDLVRWHEQYRHAKCSMDLQER
LSAPIPYQNLFLENMKLNMRKFSRGENILRLGIDFVGGRQLLLSFKDHQG
KQLTDKEDILKVSDELCARLNKLGVSEIELRREGDYIHLSVPGSSTISSS
EILGTSKMSFHVVNERFSSYSASRYEVQRFLDYLWFTSQAQGKTSPEEIN
TFASALFNEEVDVPPSVHEAITKLKSEGLAFSPSGCETPSTDLDTTFSMI
AIGKDAEQKANPLVIVFRNYALDGASLKDIRPEFAAGEGYVLNFSVKDTS
PKKMAEKLSPTESFHTWTSAYCQEGISGTANGQYSANRGWRMAVVIDGYM
VSSPILNVPLKNHASVSGKFTHREVSKLASDLKSGAMSFVPEVLSEETIS
SDLGKKQCTQGIISACCGLAMLIVLMSVYYRFGGVIASGAVLLNLLLIWA
ALQYLDAPLTLSGLAGIVLAMGMAVDANVLVFERIREEFLLSQSLKKSVE
KGYTKAFGAIFDSNLTTVLASALLFFLDTGPIKGFALTLILGIFSSMFTA
LFMTKFFFMLWMNKTQHTQLHMMNKFVGIKHDFLRGCKKLWAVSGSVFLL
GCVALGFGAWNSVLGMDFKGGYAFTFNPKEHGISDVAQMRGKVVHKLQEA
GLSSRDFRIQTFGSSEKIKIYFSDKALSYTKADTSLSPKINDHELALAVG
LLSETGLDFSTETLNETQNFWSKVSSKLSKKMRYQATIGLLGALAIILLY
VSLRFEWQYAFSAVCALIHDLLATCAVLFIAHFFLKKIQIDLQAIGALMT
VLGYSLNNTLIIFDRIREDRQANLFTPMHVLVNDALQKTFSRTVMTTATT
LSVLLMLLFIGGSSVFNFAFIMTIGILLGTLSSLYIAPPLLLFMVRKENR
SK
>gid:24916  CP0212  polymorphic membrane protein B/C family
MNISDRFSSMKWLPATAVFAAVLPALTAFGDPASVEISTSHTGSGDPTSD
AALTGFTQSSTETDGTTYTIVGDITFSTFTNIPVPVVTPDANDSSSNSSK
GGSSSSGATSLIRSSNLHSDFDFTKDSVLDLYHLFFPSASNTLNPALLSS
SSSGGSSSSSSSSSSGSASAVVAADPKGGAAFYSNEANGTLTFTTDSGNP
GSLTLQNLKMTGDGAAIYSKGPLVFTGLKNLTFTGNESQKSGGAAYTEGA
LTTQAIVEAVTFTGNTSAGQGGAIYVKEATLFNALDSLKFEKNTSGQAGG
GIYTESTLTISNITKSIEFISNKASVPAPAPEPTSPAPSSLINSTTIDTS
TLQTRAASATPAVAPVAAVTPTPISTQETAGNGGAIYAKQGISISTFKDL
TFKSNSASVDATLTVDSSTIGESGGAIFAADSIQIQQCTGTTLFSGNTAN
KSGGGIYAVGQVTLEDIANLKMTNNTCKGEGGAIYTKKALTINNGAILTT
FSGNTSTDNGGAIFAVGGITLSDLVEVRFSKNKTGNYSAPITKAASNTAP
VVSSSTTAASPAVPAAAAAPVTNAAKGGALYSTEGLTVSGITSILSFENN
ECQNQGGGAYVTKTFQCSDSHRLQFTSNKAADEGGGLYCGDDVTLTNLTG
KTLFQENSSEKHGGGLSLASGKSLTMTSLESFCLNANTAKENGGGANVPE
NIVLTFTYTPTPNEPAPVQQPVYGEALVTGNTATKSGGGIYTKNAAFSNL
SSVTFDQNTSSENGGALLTQKAADKTDCSFTYITNVNITNNTATGNGGGI
AGGKAHFDRIDNLTVQSNQAKKGGGVYLEDALILEKVITGSVSQNTATES
GGGIYAKDIQLQALPGSFTITDNKVETSLTTSTNLYGGGIYSSGAVTLTN
ISGTFGITGNSVINTATSQDADIQGGGIYATTSLSINQCNTPILFSNNSA
ATKKTSTTKQIAGGAIFSAAVTIENNSQPIIFLNNSAKSEATTAATAGNK
DSCGGAIAANSVTLTNNPEITFKGNYAETGGAIGCIDLTNGSPPRKVSIA
DNGSVLFQDNSALNRGGAIYGETIDISRTGATFIGNSSKHDGSAICCSTA
LTLAPNSQLIFENNKVTETTATTKASINNLGAAIYGNNETSDITISLSAE
NGSIFFKNNLCTATNKYCSIAGNVKFTAIEASAGKAISFYDAVNVSTKET
NAQELKLNEKATSTGTILFSGELHENKSYIPQKVTFAHGNLILGKNAELS
VVSFTQSPGTTITMGPGSVLSNHSKEAGGIAINNVIIDFSEIVPTKDNAT
VAPPTLKLVSRTNADSKDKIDITGTVTLLDPNGNLYQNSYLGEDRDITLF
NIDNSASGAVTATNVTLQGNLGAKKGYLGTWNLDPNSSGSKIILKWTFDK
YLRWPYIPRDNHFYINSIWGAQNSLVTVKQGILGNMLNNARFEDPAFNNF
WASAIGSFLRKEVSRNSDSFTYHGRGYTAAVDAKPRQEFILGAAFSQVFG
HAESEYHLDNYKHKGSGHSTQASLYAGNIFYFPAIRSRPILFQGVATYGY
MQHDTTTYYPSIEEKNMANWDSIAWLFDLRFSVDLKEPQPHSTARLTFYT
EAEYTRIRQEKFTELDYDPRSFSACSYGNLAIPTGFSVDGALAWREIILY
NKVSAAYLPVILRNNPKATYEVLSTKEKGNVVNVLPTRNAARAEVSSQIY
LGSYWTLYGTYTIDASMNTLVQMANGGIRFVF
>gid:24921  CP0217  lipoprotein signal peptidase
MATRFRSTLLVITLFVLIDWVTKLVVLLQYKDLQILTHPTLYTHSWGRFS
FSIAPVFNEGAAFGLFSNYKYFLFLLRIFVILGLLAYLFFKKKSIQSTTQ
TALVLLCAGAIGNVGDIIFYGHIVDFISFNYKQWAFPTFNVADVLISLGT
LLLVYKFYFPTKQTEKKR
>gid:24937  CP0233  ATP-dependent Clp protease, proteolytic subunit
MADGEVHKLRDIIEKELLEARRVFFSEPVTEKSASDAIKKLWYLELKDPG
KPIVFVINSPGGSVDAGFAVWDQIKMLTSPVTTVVTGLAASMGSVLSLCA
APGRRFATPHSRIMIHQPSIGGPITGQATDLDIHAREILKTKARIIDVYV
EATNQPRDIIEKAIDRDMWMTANEAKDFGLLDGILFSFNDL
>gid:24988  CP0286  polymorphic membrane protein E/F family
MRFFCFGMLLPFTFVLANEGLQLPLETYITLSPEYQAAPQVGFTHNQNQD
LAIVGNHNDFILDYKYYRSNGGALTCKNLLISENIGNVFFEKNVCPNSGG
AIYAAQNCTISKNQNYAFTTNLVSDNPTATAGSLLGGALFAINCSITNNL
GQGTFVDNLALNKGGALYTETNLSIKDNKGPIIIKQNRALNSDSLGGGIY
SGNSLNIEGNSGAIQITSNSSGSGGGIFSTQTLTISSNKKLIEISENSAF
ANNYGSNFNPGGGGLTTTFCTILNNREGVLFNNNQSQSNGGAIHAKSIII
KENGPVYFLNNTATRGGALLNLSAGSGNGSFILSADNGDIIFNNNTASKH
ALNPPYRNAIHSTPNMNLQIGARPGYRVLFYDPIEHELPSSFPILFNFET
GHTGTVLFSGEHVHQNFTDEMNFFSYLRNTSELRQGVLAVEDGAGLACYK
FFQRGGTLLLGQGAVITTAGTIPTPSSTPTTVGSTITLNHIAIDLPSILS
FQAQAPKIWIYPTKTGSTYTEDSNPTITISGTLTLRNSNNEDPYDSLDLS
HSLEKVPLLYIVDVAAQKINSSQLDLSTLNSGEHYGYQGIWSTYWVETTT
ITNPTSLLGANTKHKLLYANWSPLGYRPHPERRGEFITNALWQSAYTALA
GLHSLSSWDEEKGHAASLQGIGLLVHQKDKNGFKGFRSHMTGYSATTEAT
SSQSPNFSLGFAQFFSKAKEHESQNSTSSHHYFSGMCIENTLFKEWIRLS
VSLAYMFTSEHTHTMYQGLLEGNSQGSFHNHTLAGALSCVFLPQPHGESL
QIYPFITALAIRGNLAAFQESGDHAREFSLHRPLTDVSLPVGIRASWKNH
HRVPLVWLTEISYRSTLYRQDPELHSKLLISQGTWTTQATPVTYNALGIK
VKNTMQVFPKVTLSLDYSADISSSTLSHYLNVASRMRF
>gid:25000  CP0298  polymorphic membrane protein H family
MPLSFKSSSFCLLACLCSASCAFAETRLGGNFVPPITNQGEEILLTSDFV
CSNFLGASFSSSFINSSSNLSLLGKGLSLTFTSCQAPTNSNYALLSAAET
LTFKNFSSINFTGNQSTGLGGLIYGKDIVFQSIKDLIFTTNRVAYSPASV
TTSATPAITTVTTGASALQPTDSLTVENISQSIKFFGNLANFGSAISSSP
TAVVKFINNTATMSFSHNFTSSGGGVIYGGSSLLFENNSGCIIFTANSCV
NSLKGVTPSSGTYALGSGGAICIPTGTFELKNNQGKCTFSYNGTPNDAGA
IYAETCNIVGNQGALLLDSNTAARNGGAICAKVLNIQGRGPIEFSRNRAE
KGGAIFIGPSVGDPAKQTSTLTILASEGNIAFQGNMLNTKPGIRNAITVE
AGGEIVSLSAQGGSRLVFYDPITHSLPTTSPSNKDITINANGASGSVVFT
SKGLSSTELLLPANTTTILLGTVKIASGELKITDNAVVNVLGFATQGSGQ
LTLGSGGTLGLATPTGAPAAVDFTIGKLAFDPFSFLKRDFVSASVNAGTK
NVTLTGALVLDEHDVTDLYDMVSLQSPVAIPIAVFKGATVTKTGFPDGEI
ATPSHYGYQGKWSYTWSRPLLIPAPDGGFPGGPSPSANTLYAVWNSDTLV
RSTYILDPERYGEIVSNSLWISFLGNQAFSDILQDVLLIDHPGLSITAKA
LGAYVEHTPRQGHEGFSGRYGGYQAALSMNYTDHTTLGLSFGQLYGKTNA
NPYDSRCSEQMYLLSFFGQFPIVTQKSEALISWKAAYGYSKNHLNTTYLR
PDKAPKSQGQWHNNSYYVLISAEHPFLNWCLLTRPLAQAWDLSGFISAEF
LGGWQSKFTETGDLQRSFSRGKGYNVSLPIGCSSQWFTPFKKAPSTLTIK
LAYKPDIYRVNPHNIVTVVSNQESTSISGANLRRHGLFVQIHDVVDLTED
TQAFLNYTFDGKNGFTNHRVSTGLKSTF
>gid:25001  CP0299  polymorphic membrane protein G family
MYLFFYSLSLICRIIWFHLYVQMKTSIRKFLISTTLAPCFASTAFTVEVI
MPSENFDGSSGKIFPYTTLSDPRGTLCIFSGDLYIANLDNAISRTSSSCF
SNRAGALQILGKGGVFSFLNIRSSADGAAISSVITQNPELCPLSFSGFSQ
MIFDNCESLTSDTSASNVIPHASAIYATTPMLFTNNDSILFQYNRSAGFG
AAIRGTSITIENTKKSLLFNGNGSISNGGALTGSAAINLINNSAPVIFST
NATGIYGGAIYLTGGSMLTSGNLSGVLFVNNSSRSGGAIYANGNVTFSNN
SDLTFQNNTASPQNSLPAPTPPPTPPAVTPLLGYGGAIFCTPPATPPPTG
VSLTISGENSVTFLENIASEQGGALYGKKISIDSNKSTIFLGNTAGKGGA
IAIPESGELSLSANQGDILFNKNLSITSGTPTRNSIHFGKDAKFATLGAT
QGYTLYFYDPITSDDLSAASAAATVVVNPKASADGAYSGTIVFSGETLTA
TEAATPANATSTLNQKLELEGGTLALRNGATLNVHNFTQDEKSVVIMDAG
TTLATTNGANNTDGAITLNKLVINLDSLDGTKAAVVNVQSTNGALTISGT
LGLVKNSQDCCDNHGMFNKDLQQVPILELKATSNTVTTTDFSLGTNGYQQ
SPYGYQGTWEFTIDTTTHTVTGNWKKTGYLPHPERLAPLIPNSLWANVID
LRAVSQASAADGEDVPGKQLSITGITNFFHANHTGDARSYRHMGGGYLIN
TYTRITPDAALSLGFGQLFTKSKDYLVGHGHSNVYFATVYSNITKSLFGS
SRFFSGGTSRVTYSRSNEKVKTSYTKLPKGRCSWSNNCWLGELEGNLPIT
LSSRILNLKQIIPFVKAEVAYATHGGIQENTPEGRIFGHGHLLNVAVPVG
VRFGKNSHNRPDFYTIIVAYAPDVYRHNPDCDTTLPINGATWTSIGNNLT
RSTLLVQASSHTSVNDVLEIFGHCGCDIRRTSRQYTLDIGSKLRF
>gid:25004  CP0302  polymorphic membrane protein G family
MIYLFCFYIDANSSLKNKSITMKTSIPWVLVSSVLAFSCHLQSLANEELL
SPDDSFNGNIDSGTFTPKTSATTYSLTGDVFFYEPGKGTPLSDSCFKQTT
DNLTFLGNGHSLTFGFIDAGTHAGAAASTTANKNLTFSGFSLLSFDSSPS
TTVTTGQGTLSSAGGVNLENIRKLVVAGNFSTADGGAIKGASFLLTGTSG
DALFSNNSSSTKGGAIATTAGARIANNTGYVRFLSNIASTSGGAIDDEGT
SILSNNKFLYFEGNAAKTTGGAICNTKASGSPELIISNNKTLIFASNVAE
TSGGAIHAKKLALSSGGFTEFLRNNVSSATPKGGAISIDASGELSLSAET
GNITFVRNTLTTTGSTDTPKRNAINIGSNGKFTELRAAKNHTIFFYDPIT
SEGTSSDVLKINNGSAGALNPYQGTILFSGETLTADELKVADNLKSSFTQ
PVSLSGGKLLLQKGVTLESTSFSQEAGSLLGMDSGTTLSTTAGSITITNL
GINVDSLGLKQPVSLTAKGASNKVIVSGKLNLIDIEGNIYESHMFSHDQL
FSLLKITVDADVDTNVDISSLIPVPAEDPNSEYGFQGQWNVNWTTDTATN
TKEATATWTKTGFVPSPERKSALVCNTLWGVFTDIRSLQQLVEIGATGME
HKQGFWVSSMTNFLHKTGDENRKGFRHTSGGYVIGGSAHTPKDDLFTFAF
CHLFARDKDCFIAHNNSRTYGGTLFFKHSHTLQPQNYLRLGRAKFSESAI
EKFPREIPLALDVQVSFSHSDNRMETHYTSLPESEGSWSNECIAGGIGLD
LPFVLSNPHPLFKTFIPQMKVEMVYVSQNSFFESSSDGRGFSIGRLLNLS
IPVGAKFVQGDIGDSYTYDLSGFFVSDVYRNNPQSTATLVMSPDSWKIRG
GNLSRQAFLLRGSNNYVYNSNCELFGHYAMELRGSSRNYNVDVGTKLRF
>gid:25005  CP0303  polymorphic membrane protein G family
MKSQFSWLVLSSTLACFTSCSTVFAATAENIGPSDSFDGSTNTGTYTPKN
TTTGIDYTLTGDITLQNLGDSAALTKGCFSDTTESLSFAGKGYSLSFLNI
KSSAEGAALSVTTDKNLSLTGFSSLTFLAAPSSVITTPSGKGAVKCGGDL
TFDNNGTILFKQDYCEENGGAISTKNLSLKNSTGSISFEGNKSSATGKKG
GAICATGTVDITNNTAPTLFSNNIAEAAGGAINSTGNCTITGNTSLVFSE
NSVTATAGNGGALSGDADVTISGNQSVTFSGNQAVANGGAIYAKKLTLAS
GGGGGISFSNNIVQGTTAGNGGAISILAAGECSLSAEAGDITFNGNAIVA
TTPQTTKRNSIDIGSTAKITNLRAISGHSIFFYDPITANTAADSTDTLNL
NKADAGNSTDYSGSIVFSGEKLSEDEAKVADNLTSTLKQPVTLTAGNLVL
KRGVTLDTKGFTQTAGSSVIMDAGTTLKASTEEVTLTGLSIPVDSLGEGK
KVVIAASAASKNVALSGPILLLDNQGNAYENHDLGKTQDFSFVQLSALGT
ATTTDVPAVPTVATPTHYGYQGTWGMTWVDDTASTPKTKTATLAWTNTGY
LPNPERQGPLVPNSLWGSFSDIQAIQGVIERSALTLCSDRGFWAAGVANF
LDKDKKGEKRKYRHKSGGYAIGGAAQTCSENLISFAFCQLFGSDKDFLVA
KNHTDTYAGAFYIQHITECSGFIGCLLDKLPGSWSHKPLVLEGQLAYSHV
SNDLKTKYTAYPEVKGSWGNNAFNMMLGASSHSYPEYLHCFDTYAPYIKL
NLTYIRQDSFSEKGTEGRSFDDSNLFNLSLPIGVKFEKFSDCNDFSYDLT
LSYVPDLIRNDPKCTTALVISGASWETYANNLARQALQVRAGSHYAFSPM
FEVLGQFVFEVRGSSRIYNVDLGGKFQF
>gid:25008  CP0306  polymorphic membrane protein G family
MKSSLHWFLISSSLALPLSLNFSAFAAVVEINLGPTNSFSGPGTYTPPAQ
TTNADGTIYNLTGDVSITNAGSPTALTASCFKETTGNLSFQGHGYQFLLQ
NIDAGANCTFTNTAANKLLSFSGFSYLSLIQTTNATTGTGAIKSTGACSI
QSNYSCYFGQNFSNDNGGALQGSSISLSLNPNLTFAKNKATQKGGALYST
GGITINNTLNSASFSENTAANNGGAIYTEASSFISSNKAISFINNSVTAT
SATGGAIYCSSTSAPKPVLTLSDNGELNFIGNTAITSGGAIYTDNLVLSS
GGPTLFKNNSAIDTAAPLGGAIAIADSGSLSLSALGGDITFEGNTVVKGA
SSSQTTTRNSINIGNTNAKIVQLRASQGNTIYFYDPITTSITAALSDALN
LNGPDLAGNPAYQGTIVFSGEKLSEAEAAEADNLKSTIQQPLTLAGGQLS
LKSGVTLVAKSFSQSPGSTLLMDAGTTLETADGITINNLVLNVDSLKETK
KATLKATQASQTVTLSGSLSLVDPSGNVYEDVSWNNPQVFSCLTLTADDP
ANIHITDLAADPLEKNPIHWGYQGNWALSWQEDTATKSKAATLTWTKTGY
NPNPERRGTLVANTLWGSFVDVRSIQQLVATKVRQSQETRGIWCEGISNF
FHKDSTKINKGFRHISAGYVVGATTTLASDNLITAAFCQLFGKDRDHFIN
KNRASAYAASLHLQHLATLSSPSLLRYLPGSESEQPVLFDAQISYIYSKN
TMKTYYTQAPKGESSWYNDGCALELASSLPHTALSHEGLFHAYFPFIKVE
ASYIHQDSFKERNTTLVRSFDSGDLINVSVPIGITFERFSRNERASYEAT
VIYVADVYRKNPDCTTALLINNTSWKTTGTNLSRQAGIGRAGIFYAFSPN
LEVTSNLSMEIRGSSRSYNADLGGKFQF
>gid:25010  CP0308  polymorphic membrane protein G family
MKSSVSWLFFSSIPLFSSLSIVAAEVTLDSSNNSYDGSNGTTFTVFSTTD
AAAGTTYSLLSDVSFQNAGALGIPLASGCFLEAGGDLTFQGNQHALKFAF
INAGSSAGTVASTSAADKNLLFNDFSRLSIISCPSLLLSPTGQCALKSVG
NLSLTGNSQIIFTQNFSSDNGGVINTKNFLLSGTSQFASFSRNQAFTGKQ
GGVVYATGTITIENSPGIVSFSQNLAKGSGGALYSTDNCSITDNFQVIFD
GNSAWEAAQAQGGAICCTTTDKTVTLTGNKNLSFTNNTALTYGGAISGLK
VSISAGGPTLFQSNISGSSAGQGGGGAINIASAGELALSATSGDITFNNN
QVTNGSTSTRNAINIIDTAKVTSIRAATGQSIYFYDPITNPGTAASTDTL
NLNLADANSEIEYGGAIVFSGEKLSPTEKAIAANVTSTIRQPAVLARGDL
VLRDGVTVTFKDLTQSPGSRILMDGGTTLSAKEANLSLNGLAVNLSSLDG
TNKAALKTEAADKNISLSGTIALIDTEGSFYENHNLKSASTYPLLELTTA
GANGTITLGALSTLTLQEPETHYGYQGNWQLSWANATSSKIGSINWTRTG
YIPSPERKSNLPLNSLWGNFIDIRSINQLIETKSSGEPFERELWLSGIAN
FFYRDSMPTRHGFRHISGGYALGITATTPAEDQLTFAFCQLFARDRNHIT
GKNHGDTYGASLYFHHTEGLFDIANFLWGKATRAPWVLSEISQIIPLSFD
AKFSYLHTDNHMKTYYTDNSIIKGSWRNDAFCADLGASLPFVISVPYLLK
EVEPFVKVQYIYAHQQDFYERYAEGRAFNKSELINVEIPIGVTFERDSKS
EKGTYDLTLMYILDAYRRNPKCQTSLIASDANWMAYGTNLARQGFSVRAA
NHFQVNPHMEIFGQFAFEVRSSSRNYNTNLGSKFCF
>gid:25011  CP0309  polymorphic membrane protein G family
MKYSLPWLLTSSALVFSLHPLMAANTDLSSSDNYENGSSGSAAFTAKETS
DASGTTYTLTSDVSITNVSAITPADKSCFTNTGGALSFVGADHSLVLQTI
ALTHDGAAINNTNTALSFSGFSSLLIDSAPATGTSGGKGAICVTNTEGGT
ATFTDNASVTLQKNTSEKDGAAVSAYSIDLAKTTTAALLDQNTSTKNGGA
LCSTANTTVQGNSGTVTFSSNTATDKGGGIYSKEKDSTLDANTGVVTFKS
NTAKTGGAWSSDDNLALTGNTQVLFQENKTTGSAAQANNPEGCGGAICCY
LATATDKTGLAISQNQEMSFTSNTTTANGGAIYATKCTLDGNTTLTFDQN
TATAGCGGAIYTETEDFSLKGSTGTVTFSTNTAKTGGALYSKGNSSLTGN
TNLLFSGNKATGPSNSSANQEGCGGAILSFLESASVSTKKGLWIEDNENV
SLSGNTATVSGGAIYATKCALHGNTTLTFDGNTAETAGGAIYTETEDFTL
TGSTGTVTFSTNTAKTAGALHTKGNTSFTKNKALVFSGNSATATATTTTD
QEGCGGAILCNISESDIATKSLTLTENESLSFINNTAKRSGGGIYAPKCV
ISGSESINFDGNTAETSGGAIYSKNLSITANGPVSFTNNSGGKGGAIYIA
DSGELSLEAIDGDITFSGNRATEGTSTPNSIHLGAGAKITKLAAAPGHTI
YFYDPITMEAPASGGTIEELVINPVVKAIVPPPQPKNGPIASVPVVPVAP
ANPNTGTIVFSSGKLPSQDASIPANTTTILNQKINLAGGNVVLKEGATLQ
VYSFTQQPDSTVFMDAGTTLETTTTNNTDGSIDLKNLSVNLDALDGKRMI
TIAVNSTSGGLKISGDLKFHNNEGSFYDNPGLKANLNLPFLDLSSTSGTV
NLDDFNPIPSSMAAPDYGYQGSWTLVPKVGAGGKVTLVAEWQALGYTPKP
ELRATLVPNSLWNAYVNIHSIQQEIATAMSDAPSHPGIWIGGIGNAFHQD
KQKENAGFRLISRGYIVGGSMTTPQEYTFAVAFSQLFGKSKDYVVSDIKS
QVYAGSLCAQSSYVIPLHSSLRRHVLSKVLPELPGETPLVLHGQVSYGRN
HHNMTTKLANNTQGKSDWDSHSFAVEVGGSLPVDLNYRYLTSYSPYVKLQ
VVSVNQKGFQEVAADPRIFDASHLVNVSIPMGLTFKHESAKPPSALLLTL
GYAVDAYRDHPHCLTSLTNGTSWSTFATNLSRQAFFAEASGHLKLLHGLD
CFASGSCELRSSSRSYNANCGTRYSF
>gid:25098  CP0394  protein export protein, FHIPEP family
MSGKKDGVRGMIFVPLSILVLIFLPLPQILLDFGLCISFALSLLTVCWVF
TLNSSNSAKLFPPFFLYLCLLRLGLNLASTRWIVSSGTASSLIVSLGSFF
SLGSLWAATFACLLLFFVNFLMVSKGSERIAEVRSRFFLEALPAKQMALD
SDLVSGRASYKAVKKQKNALIEEGDFFSAMEGVFRFVKGDAIISCILLLV
NVVSVTCLYYTSGYALEQMWFTVLGDALVSQVPALLTSCAAATLISKIDK
EESLLNYLFEYYKQLRQHFRVVSLLIFSLCCIPSSPKFPIVLLASLLWLA
YRKEEPASEDSCIERAFSYVEGACPKEQESQFYQVYRAASEEVFEDLGVR
LPVLTSLRIEERPWLRVFGQNVYLDEMTPEAVLPFLRNIAHEALNAEVVQ
KYLEESERVFGIAVEDIVPKKISLSSLVVLSRLLVRERVSLKLFPKILEA
VAVYQNSGDSLEILAEKVRKSLGYWIGRSLWDQKQTLEVITIDFHVEELI
NSSYSKSNPVMQENVIRRVDSLLERSVFKDFRAIVTSCETRFEMKKMLDP
HFPDLLVLSHDELPKEIPISFLGIVSDEVLVP
>gid:25137  CP0434  type III secretion inner membrane protein SctV
MNKLLNFVSRTLGGDTALNMINKSSDLILALWMMGVVLMIIIPLPPPIVD
LMITINLSISVFLLMVALYIPSALQLSVFPSLLLITTMFRLGINISSSRQ
ILLKAYAGHVIQAFGDFVVGGNYVVGFIIFLIITIIQFIVVTKGAERVAE
VAARFRLDAMPGKQMAIDADLRAGMIDATQARDKRAQIQKESELYGAMDG
AMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDG
LVSQIPSLLIALTAGIVTTRVSSDKNTNLGKEISTQLVKEPRALLLAGAA
TLGVGFFKGFPLWSFSILALIFVALGILLLTKKSAAGKKGGGSGASTTVG
AAGDGAATVGDNPDDYSLTLPVILELGKDLSKLIQHKTKSGQSFVDDMIP
KMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPYVRGKIPPHHV
LTNEVEDNLSRYNLPFITYKNAAGLPSAWVSEDAKAILEKAAIKYWTPLE
VIILHLSYFFHKSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKL
TEIFKRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYIS
FKFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSM
RNTITPTPAGGQPPVLLTAIDVRRYVRKLIETEFPDIAVISYQEILPEIR
IQPLGRIQIF
>gid:25138  CP0435  type III secretion inner membrane protein SctU
MGEKTEKATPKRLRDARKKGQVAKSQDFPSAVTFIVSMFTAFSLSTFFFK
HLGGFLVSMLSQAPTRHDPVITLFYLKNCLMLILTASLPLLGAVAVVGVI
VGFLIVGPTFSTEVFKPDIKKFNPIENIKQKFKIKTLIELIKSILKIFGA
ALILYITLKSKVSLIIETAGVSPIITAQIFKEIFYKAVTSIGIFFLIVAI
LDLVYQRHNFAKELKMEKFEVKQEFKDTEGNPEIKGRRRQIAQEIAYEDS
SSQVKHASTVVSNPKDIAVAIGYMPEKYKAPWIIAMGINLRAKRILDEAE
KYGIPIMRNVPLAHQLLDEGKELKFIPESTYEAIGEILLYITSLNAQNPN
NKNTNQPDHL
>gid:25151  CP0448  inner membrane protein, putative
MNKRTLLFVSLIGIAFVGCQIFFGYNEFRSCKNLAEKQRKISEQTLAAVE
SVGLSVASWDTDVNGEEHKNNYAVRVGDKLFLLHNGEAAQSVYSSGESWS
FVDHKCGFDNIHLALYRQQGSSFNPTNTGKVFLPTNHEGLPVLVVEFRNN
KEPLVFLGEYAQGRISNKDSTIFGTALVFWRSGSDYIPLGLYDSREEKLV
SLDLPITRAVIFGNDQDSAKSSDTANHYVLFNDYMQIIVSEESGSIEGIN
LPFASTNNKSIVNEIGFDRDLASEKSPEALFPGLSSKLPDGQQAKNSIGG
YYPLLRRGLLSDSKKLLPLEYHALNVVSGRELATPVALRYRVLSYTPHSI
QLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEI
MSNASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGY
FGIILTPLSEIASGYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETL
LPLPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPEYLDSISFRGV
FAFITAPFAALLFIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIR
SMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVNPITGCLPLLI
QLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNE
FHLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFY
NFPSGLNIYWLSSMILGVVQQWITNKILDSKHLKNEVVLNNKKHR
>gid:25364  CP0658  signal recognition particle protein FFH
MINSLSQKLSSIFSFLVSSRRINEENISESIREVRLALLDADVNYHVVKD
FISKVKEKILGEEIWKHVSPGQQFIRCLHEELVAFLSDGREEFTIQKTPS
IILLCGLQGAGKTTTAAKLADYVIKNKKAKKVLVVPCDLKRFAAVDQLKI
LVAQTKAEFYQSQENKPIDVVVKALAYAKENGHDFVILDTAGRLNIDNEL
MEELTAIQKVSQANERLFVMNVAMGQDVLATVQAFDQSLDLTGVILSMTD
GDARAGAVFSIKHVLGKPIKFEGCGERIQDLRSFDPQSMAERILGMGDTI
NFVKEMREYISEEEDAELGKKLVTAAFTYEDYYKQMKAFRRMGPLRKLLG
MMPGFNNAKPSQKEIEDSEQQMKRTEAIILSMTPEERKELVELDMSRMKR
IASGCGLTLGDVNQFRKQMSQSKKFFKGMSKGKMEQVRKKMSGGNQWR
>gid:25370  CP0664  signal peptidase I, putative
MKQHYSLNKSRHILRSTYKLLKSKKLAHSPADKKQLQELLEQLEEAIFEH
DQETASDLAQQALAFSNRYPNSFGRKTYELIKALLFAGVVAFLVRQFWFE
LYEVPTGSMRPTILEQDRILVSKTTFGLHCPFAKKPLAFNPESVTRGGLV
VFTVGDLPIPDADTKYFGLIPGKKRYIKRCMGRPGDFLYFYGGKIYGLDD
AGKRIEFPSVHGLENLYHVPYISFDGTTSSHTEGQKTIIDFKQFNQSYGR
LIFPQTSMYGQFFDHKEWHQDEPNKLKDPHLSPVSYADLFGMGNYAMVRI
LTEHQARTSHLLPNPGSPTKVYLEICHTANLSYPKPLLRHYEHQLSPAIQ
PMKTLLPLRKEHLHLIRNNLTTSRFIVAQGCAYKYHQFKINTSGIAKAYA
ILLPKVPDGCYEYSKGEAYQIGFGEIRYKLKSSHPLTQLNDKQVIELFNC
GINFSSIYNPVNPLQAPLPNRYAFFNQGNLYIMDSPVFIKNDPTLQKFVT
SETEKQEGSSETQPYIAFVDKGLPPEDFKEFVEFIHNFGIQVPKGHVLVL
GDNYPMSADSREFGFVPMENLLGSPLCTFWPIGRMGRLTGVSAPTTLSGY
LVSGIALATGLSLIGYVYYQKRRRLFPKKEEKNHKK
>gid:25406  CP0700  preprotein translocase SecE subunit, putative
MKQQHNRKALSRKIGTVKKQAKFAGSFLDEIKKIEWVSKHDLKKYIKVVL
ISIFGFGFAIYFVDLVLRKSITCLDGITTFLFG
>gid:25467  CP0761  polymorphic membrane protein G family
MKIPLRFLLISLVPTLSMSNLLGAATTEELSASNSFDGTTSTTSFSSKTS
SATDGTNYVFKDSVVIENVPKTGETQSTSCFKNDAAAGDLNFLGGGFSFT
FSNIDATTASGAAIGSEAANKTVTLSGFSALSFLKSPASTVTNGLGAINV
KGNLSLLDNDKVLIQDNFSTGDGGAINCAGSLKIANNKSLSFIGNSSSTR
GGAIHTKNLTLSSGGETLFQGNTAPTAAGKGGAIAIADSGTLSISGDSGD
IIFEGNTIGATGTVSHSAIDLGTSAKITALRAAQGHTIYFYDPITVTGST
SVADALNINSPDTGDNKEYTGTIVFSGEKLTEAEAKDEKNRTSKLLQNVA
FKNGTVVLKGDVVLSANGFSQDANSKLIMDLGTSLVANTESIELTNLEIN
IDSLRNGKKIKLSAATAQKDIRIDRPVVLAISDESFYQNGFLNEDHSYDG
ILELDAGKDIVISADSRSIDAVQSPYGYQGKWTINWSTDDKKATVSWAKQ
SFNPTAEQEAPLVPNLLWGSFIDVRSFQNFIELGTEGAPYEKRFWVAGIS
NVLHRSGRENQRKFRHVSGGAVVGASTRMPGGDTLSLGFAQLFARDKDYF
MNTNFAKTYAGSLRLQHDASLYSVVSILLGEGGLREILLPYVSKTLPCSF
YGQLSYGHTDHRMKTESLPPPPPTLSTDHTSWGGYVWAGELGTRVAVENT
SGRGFFQEYTPFVKVQAVYARQDSFVELGAISRDFSDSHLYNLAIPLGIK
LEKRFAEQYYHVVAMYSPDVCRSNPKCTTTLLSNQGSWKTKGSNLARQAG
IVQASGFRSLGAAAELFGNFGFEWRGSSRSYNVDAGSKIKF
>gid:25476  CP0770  polymorphic membrane protein G family
MRFSLCGFPLVFSFTLLSVFDTSLSATTISLTPEDSFHGDSQNAERSYNV
QAGDVYSLTGDVSISNVDNSALNKACFNVTSGSVTFAGNHHGLYFNNISS
GTTKEGAVLCCQDPQATARFSGFSTLSFIQSPGDIKEQGCLYSKNALMLL
NNYVVRFEQNQSKTKGGAISGANVTIVGNYDSVSFYQNAATFGGAIHSSG
PLQIAVNQAEIRFAQNTAKNGSGGALYSDGDIDIDQNAYVLFRENEALTT
AIGKGGAVCCLPTSGSSTPVPIVTFSDNKQLVFERNHSIMGGGAIYARKL
SISSGGPTLFINNISYANSQNLGGAIAIDTGGEISLSAEKGTITFQGNRT
SLPFLNGIHLLQNAKFLKLQARNGYSIEFYDPITSEADGSTQLNINGDPK
NKEYTGTILFSGEKSLANDPRDFKSTIPQNVNLSAGYLVIKEGAEVTVSK
FTQSPGSHLVLDLGTKLIASKEDIAITGLAIDIDSLSSSSTAAVIKANTA
NKQISVTDSIELISPTGNAYEDLRMRNSQTFPLLSLEPGAGGSVTVTAGD
FLPVSPHYGFQGNWKLAWTGTGNKVGEFFWDKINYKPRPEKEGNLVPNIL
WGNAVDVRSLMQVQETHASSLQTDRGLWIDGIGNFFHVSASEDNIRYRHN
SGGYVLSVNNEITPKHYTSMAFSQLFSRDKDYAVSNNEYRMYLGSYLYQY
TTSLGNIFRYASRNPNVNVGILSRRFLQNPLMIFHFLCAYGHATNDMKTD
YANFPMVKNSWRNNCWAIECGGSMPLLVFENGRLFQGAIPFMKLQLVYAY
QGDFKETTADGRRFSNGSLTSISVPLGIRFEKLALXQDVLYDFSFSYIPD
IFRKDPSCEAALVISGDSWLVPAAHVSRHAFVGSGTGRYHFNDYTELLCR
GSIECRPHARNYNINCGSKFRF
>gid:25550  CP0843  conserved hypothetical protein
MLILLNLSLLFYVLFDSPGSIPVFVALLKNFSRKKQQRVILRECLFALGA
LILFVTFGRSFFQFLDISLYAFQIIGGFLLFTVSIKMMLAPMPEKAKDDT
SKTEPIFFPLAFPVITGPAVITALLSYMEEGIYSREIIFTAMIIAWAFSL
FTLLCSSFFDRLSGNFGLLALERLFGIALLLMSVNLMLKGISIAFNIGFY
IG
>gid:25596  CP0887  signal recognition particle protein FtsY
MFKFFRNKLQSLFKKNISLDLIEDAESLFYEADFGTELTEELCARLRRTK
KADASTIKDLITVLLRESLEGLPSQASQSSQTRPIVSLLLGTNGSGKTTT
AAKLAHYYKERSESVMLVATDTFRAAGMDQARLWANELGCGFVSGQPGGD
AAAIAFDGIQSAIARGYSRVIIDTSGRLHVHGNLMKELSKIVSVCGKALE
GAPHEIFMTVDSTLGNNAIEQVRVFHDVVPLSGLIFTKVDGSAKGGTLFQ
IAKRLKIPTKFIGYGESLKDLNEFDLDLFLNKLFPEVEKI
>gid:25606  CP0897  polymorphic membrane protein D family
MVAKKTVRSYRSSFSHSVIVAILSAGIAFEAHSLHSSELDLGVFNKQFEE
HSAHVEEAQTSVLKGSDPVNPSQKESEKVLYTQVPLTQGSSGESLDLADA
NFLEHFQHLFEETTVFGIDQKLVWSDLDTRNFSQPTQEPDTSNAVSEKIS
SDTKENRKDLETEDPSKKSGLKEVSSDLPKSPETAVAAISEDLEISENIS
ARDPLQGLAFFYKNTSSQSISEKDSSFQGIIFSGSGANSGLGFENLKAPK
SGAAVYSDRDIVFENLVKGLSFISCESLEDGSAAGVNIVVTHCGDVTLTD
CATGLDLEALRLVKDFSRGGAVFTARNHEVQNNLAGGILSVVGNKGAIVV
EKNSAEKSNGGAFACGSFVYSNNENTALWKENQALSGGAISSASDIDIQG
NCSAIEFSGNQSLIALGEHIGLTDFVGGGALAAQGTLTLRNNAVVQCVKN
TSKTHGGAILAGTVDLNETISEVAFKQNTAALTGGALSANDKVIIANNFG
EILFEQNEVRNHGGAIYCGCRSNPKLEQKDSGENINIIGNSGAITFLKNK
ASVLEVMTQAEDYAGGGALWGHNVLLDSNSGNIQFIGNIGGSTFWIGEYV
GGGAILSTDRVTISNNSGDVVFKGNKGQCLAQKYVAPQETAPVESDASST
NKDEKSLNACSHGDHYPPKTVEEEVPPSLLEEHPVVSSTDIRGGGAILAQ
HIFITDNTGNLRFSGNLGGGEESSTVGDLAIVGGGALLSTNEVNVCSNQN
VVFSDNVTSNGCDSGGAILAKKVDISANHSVEFVSNGSGKFGGAVCALNE
SVNITDNGSAVSFSKNRTRLGGAGVAAPQGSVTICGNQGNIAFKENFVFG
SENQRSGGGAIIANSSVNIQDNAGDILFVSNSTGSYGGAIFVGSLVASEG
SNPRTLTITGNSGDILFAKNSTQTAASLSEKDSFGGGAIYTQNLKIVKNA
GNVSFYGNRAPSGAGVQIADGGTVCLEAFGGDILFEGNINFDGSFNAIHL
CGNDSKIVELSAVQDKNIIFQDAITYEENTIRGLPDKDVSPLSAPSLIFN
SKPQDDSAQHHEGTIRFSRGVSKIPQIAAIQEGTLALSQNAELWLAGLKQ
ETGSSIVLSAGSILRIFDSQVDSSAPLPTENKEETLVSAGVQINMSSPTP
NKDKAVDTPVLADIISITVDLSSFVPEQDGTLPLPPEIIIPKGTKLHSNA
IDLKIIDPTNVGYENHALLSSHKDIPLISLKTAEGMTGTPTADASLSNIK
IDVSLPSITPATYGHTGVWSESKMEDGRLVVGWQPTGYKLNPEKQGALVL
NNLWSHYTDLRALKQEIFAHHTIAQRMELDFSTNVWGSGLGVVEDCQNIG
EFDGFKHHLTGYALGLDTQLVEDFLIGGCFSQFFGKTESQSYKAKNDVKS
YMGAAYAGILAGPWLIKGAFVYGNINNDLTTDYGTLGISTGSWIGKGFIA
GTSIDYRYIVNPRRFISAIVSTVVPFVEAEYVRIDLPEISEQGKEVRTFQ
KTRFENVAIPFGFALEHAYSRGSRAEVNSVQLAYVFDVYRKGPVSLITLK
DAAYSWKSYGVDIPCKAWKARLSNNTEWNSYLSTYLAFNYEWREDLIAYD
FNGGIRIIF
>gid:25692  CP0982  preprotein translocase, YajC subunit
MLSRIVTCFLFLLSSLPLFAEEEAAQSKNTFVQPAVMLAIAILFFYFILW
RPEQKRRKAMEKRKNDLAKGDKVTAMGIIGTVDDIREHTVILNIASGKVE
VLKGAISEILKPNDNKS
>gid:25721  CP1009  conserved hypothetical protein
MFFQNLAKKLTALGISPLGCLLIGGVVSCAILFGRSSNPSLAPTQVKTEK
TSGNWLKLTQMGNPKLIESLTKKEQLEKDLTSFHPIASAKVAIALSTEDD
VMSPLHLSVILTLRKEESLTPSLLFSITDYLCSSLPGLKREHISLSDNLG
NLYIPESITVNSLFIHTLENYLGKIFPKEHFALAYHAKAEKPTLQLTLNE
NYIAHLTKEESEKIVAHTKHYLYQNYDDSYDIVIETLPFARLQNKKSFPA
KVLIGSMILVISLMIVALASFYLARHAYERVSPEPRKIKRGINISKLLEI
IQKESPEKIALILSYLDPKKAEALLNRLPEDLKHQVLKYKL
>gid:25722  CP1010  conserved hypothetical protein
MTTPQSPGSLSQSHLPHPHDPWDTEPTSLPEDPNDKASQELHSLVHLFRK
LSIHLLSEVEKTVQQLKPDLLELALLICEKFLYKKLENPQELALLLSTAL
QRHTTLRSLTPIKVFLHPEDLKTLTDWISTHELPMIKHAEFFPDTSCRRS
GFKIETPNGILRQEISEELDHLLSVLTA
>gid:25723  CP1011  virulence ATPase, putative
MNHLNKEKLHIHNWQPYRACGLLSKVSGNLIEVDGLSACLGELCKISSTK
DPNLLAEVIGFHNHTTLLMSLSPLHSVALGTEVLPLRRPPSLHLSDHLLG
RVLDAFGNPIDKKEDLPKTHRKPLLSLPPSPMMRQPIDQIFPTGIKAIDA
FLTLGKGQRIGVFSEPGSGKSSLLSAIALGSKSTINVIALIGERGREVRE
HIEKHSNALKQQRTIIIAAPAHETAPTKVIAGRAAMTIAEYFREQGHEVL
FIMDSLSRWIAALQEVALARGETLSAHQYAASVFHHVSEFTERAGNNDKG
SITALYAILYYPKHPDIFTDYLKSLLDGHFFLTSQGKALASPPIDILSSL
SRSAQALALPHHYAAAERLRSLLKVYNEALDIIHLGAYTPGQDEELDKAV
KLLPSIKAFLAQPLSSYCYLDNTLKQLEALADS
>gid:25735  CP1022  ATP-dependent Clp protease, proteolytic subunit
MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLF
LMSEDPKKDIQIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMG
ALLLSAGTKGKRHALPHSRMMIHQPSGGIIGTSADIQLQAAEILTLKKHL
ANILSECTGQPVEKIIEDSERDFFMGAEEAISYGLIDKVVTSAKETNKDT
SST
>gid:25741  CP1028  preprotein translocase SecA subunit
MLGFLKRFFGSSQERILKKFQKLVDKVNIYDEMLTPLSDDELRNKTAELK
QRYQNGESLDSMLPEAYGVVKNVCRRLAGTPVEVSGYHQRWDMVPYDVQI
LGAIAMHKGFITEMQTGEGKTLTAVMPLYLNALTGKPVHLVTVNDYLAQR
DCEWVGSVLRWLGLTTGVLVSGTLLEKRKKIYQCDVVYGTASEFGFDYLR
DNSIATRLEEQVGRGYYFAIIDEVDSILIDEARTPLIISGPGEKHNPVYF
ELKEKVASLVYLQKELCSRIALEARRGLDSFLDVDILPKDKKVLEGISEF
CRSLWLVSKGMPLNRVLRRVREHPDLRAMIDKWDVYYHAEQNKEESLERL
SELYIIVDEHNNDFELTDKGMQQWVEYAGGSTEEFVMMDMGHEYALIEND
ETLSPADKINKKIAISEEDTLRKARAHGLRQLLRAQLLMERDVDYIVRDD
QIVIIDEHTGRPQPGRRFSEGLHQAIEAKEHVTIRKESQTLATVTLQNFF
RLYEKLAGMTGTAITESREFKEIYNLYVLQVPTFKPCLRIDHNDEFYMTE
REKYHAIVNEIATIHGKGNPILVGTESVEVSEKLSRILRQNRIEHTVLNA
KNHAQEAEIIAGAGKLGAVTVATNMAGRGTDIKLDNEAVIVGGLHVIGTT
RHQSRRIDRQLRGRCARLGDPGAAKFFLSFEDRLMRLFASPKLNTLIRHF
RPPEGEAMSDPMFNRLIETAQKRVEGRNYTIRKHTLEYDDVMNKQRQAIY
AFRHDVLHAESVFDLAKEILCHVSLMVASLVMSDRQFKGWTLPNLEEWIT
SSFPIALNIEELRQLKDTDSIAEKIAAELIQEFQVRFDHMVEGLSKAGGE
ELDASAICRDVVRSVMVMHIDEQWRIHLVDMDLLRSEVGLRTVGQKDPLL
EFKHESFLLFESLIRDIRITIARHLFRLELTVEPNPRVNNVIPTVATSFH
NNVNYGPLELTVVTDSEDQD
>gid:25756  CP1043  type III secretion protein SctJ
MVRRSISFCLFFLMTLLCCTSCNSRSLIVHGLPGREANEIVVLLVSKGVA
AQKLPQAAAATAGAATEQMWDIAVPSAQITEALAILNQAGLPRMKGTSLL
DLFAKQGLVPSELQEKIRYQEGLSEQMASTIRKMDGVVDASVQISFTTEN
EDNLPLTASVYIKHRGVLDNPNSIMVSKIKRLIASAVPGLVPENVSVVSD
RAAYSDITINGPWGLTEEIDYVSVWGIILAKSSLTKFRLIFYVLILILFV
ISCGLLWVIWKTHTLIMTMGGTKGFFNPTPYTKNALEAKKAEGAAADKEK
KEDADSQGESKNAETSDKDSSDKDAPEGSNEIEGA
>gid:25758  CP1045  type III secretion translocase sctL
MKFFSLIFKDDDVSPNKKVLSPEAFSAFLDAKELLEKTKADSEAYVAETE
QKCAQIRQEAKDQGFKEGSESWSKQIAFLEEETKNLRIRVREALVPLAIA
SVRKIIGKELELHPETIVSIISQALKELTQNKHIIISVNPKDLPLVEKSR
PELKNIVEYADSLILTAKPDVTPGGCIIETEAGIINAQLDVQLDALEKAF
STILKAKNPVDEPSETSSSTDSSSLSNDQDKKE
>gid:25759  CP1046  type III secretion inner membrane protein SctR
MRSIFRFSLCFFTLSVSCCFADASLYENSCPSRCQPTPPPSNSNPLNVVQ
QPVAASSVPSYMPPLNADDVLPRDHLSDGSFSDTYPDITTQAIILIFLAL
SPFLVMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFP
TGVAMYKDARKEIEANTIPQSLFTAEGAETVFVALNKSKEPLRSFLIRNT
PKAQIQSFYKISQKTFPSEIRAHLTASDFVIIIPAFIMGQIKNAFEIGVL
IYLPFFVIDLVTANVLVAMQMMMLSPLSISLPLKLLLIVMVDGWTLLLQG
LMISFK
>gid:25760  CP1047  type III secretion inner membrane protein SctS
MLAFFATSFKSVLFEYSYQSLLLILIVSAPPIILASIVGIMVAIFQAATQ
IQEQTFAFAVKLVVIFGTLMISGGWLSNMILRFAGQIFQNFYKWK
>gid:25761  CP1048  type III secretion inner membrane protein SctT
MGISLPELFSNLGSAYLDYIFQHPPAYVWSVFLLLLARLLPIFAVAPFLG
AKLFPSPIKIGISLSWLAIIFPKVLADTQITNYMDNNLFYVLLVKEMIIG
IVIGFVLAFPFYAAQSAGSFITNQQGIQGLEGATSLISIEQTSPHGILYH
YFVTIIFWLVGGHRIVISLLLQTLEVIPIHSFFPAEMMSLSAPIWITMIK
MCQLCLVMTIQLSAPAALAMLMSDLFLGIINRMAPQVQVIYLLSALKAFM
GLLFLTLAWWFIIKQIDYFTLAWFKEVPIMLLGSNPQVL
>gid:25765  CP1052  Conserved hypothetical protein
MGSRRKLKRSFLLIEVLMALSLVCAVLLPCIRFYYAIHRSFEEDIFNLQL
PALIDHCFLSVEEKMRQQMAEGTVLTSGKGQTVSLAYTSQGIGYRIPYGY
NVDIRQEVRGDNLKMKVCLADVVVELFPDQKQAVSVQRCLCVTL
>gid:25766  CP1053  conserved hypothetical protein
MKRQKRKQSITLIEMMVVITLIGIIGGALAFNMRGSIHKGKVFQSEQNCA
KVYDILMMEYATGGSSLKEIIAHKETVVEEASWCKEGRKLLKDAWGEDLI
VQLNDKGDDLVIFSKRVQSSNKK
>gid:25767  CP1054  general secretion pathway protein F
MPRYRYTYLDPKERRKRGYLEALHIQEAREKLAQENIQVLDIREVALRRM
SIKSTELIVFTKQLLLLLRSGLPLYESLVSLRDQYHEQKMGLLLTSFMET
LRSGGSLSQAMAAHPNIFDHFYCSGVAAGESVGNLEGCLQNIIVVLEERA
QITKKMVGALSYPCVLLVFSFAVMLFFLLGVIPSLKETFENMEVKGLTKI
VFGVSDCLSAYRYLFLGFASALITVGILMRHRIPWKKILEKLLFALPGTK
KFVVKVAVNRFCSVASAILKGGGTLIEGLDLGCDAIPYDRLKTDMRDIVQ
AVIGGGSLSQELAQRSWVPKLAIGMIALGEESGDLADVLGYVAHIYNEDT
QKTLASITSWCQPVILIFLGGLIGVIMLAILIPLTSNIQTL
>gid:25768  CP1055  general secretion pathway protein E
MAASILSQELLDILPYTFLKKHCLLPIEESSEAITIAHATATSVIAQDEV
KLLIKKPVRFVLKEESEILQRLQQLYSNREGNVSDMLLTMKEEDGTTISE
EEDLLETTDTIPVVRLLNWILKEAIEERASDIHFEPCEDSMRIRYRIDGV
LHDRHSPPSHLRSALTTRLKVLAKMDIAEHRLPQDGRIKIHIGGQEVDMR
VSTVPVIYGERVVLRILDKRNVILDIAGLHMPKGTEILFKDTITAPEGIL
LVTGPTGSGKTTTLYSVLQELKGPLTNIMTIEDPPEYKLPGIAQIAVKPK
IGLTFARGLRHLLRQDPDILMVGEIRDQETAEIAIQAALTGHLVVSTLHT
NDAISAIPRLLDMGIESYLLSATLVGVVAQRLVRTICPYCKVAYTPENQE
KSFLASLGKDTEMPLYRGQGCVHCFRSGYKGRQGIYEFLRPNTLFRSEVA
SNRPYHILRETAEQNGFLPILEHGIALAVSGETTLAEVLRVTKRCD
>gid:25769  CP1056  general secretion pathway protein D
MVFFRNSLLHLVALSGMLCCSSGVALTIAEKMASLEHSGRGADDYEGMAS
FNANMREYSLQLSKLYEEARKLRASGTEDEALWKDLIRRIGEVRGYLREI
EELWAAEIREKGGNLEDYALWNHPETTIYNLVTDYGTEDSIYLIPQEIGA
IKIATLSKFVVPKESFEDCLTQILSRLGIGVRQVNSWIKELYMMRKEGCS
VAGVFSSRKDLEALPETAYIGFVLNSNVDAHTNQHVLKKFINPETTHVDV
IAGRVWIFGSAGEVGELLKIYNFVQSESIRQEYRVIPLTKIDPGEMISIL
NAAFREDLTKDVSEESLGLRVVPLQYQGRSLFLSGTAALVQQALTLIREL
EEGIENPTDKTVFWYNVKHSDPQELAALLSQVHDVFSGENKASVGAADGC
GSQLNASIQIDTTVSSSAKDGSVKYGNFIADSKTGTLIMVVEKEVLPRIQ
MLLKKLDVPKKMVRIEVLLFERKLAHEQKSGLNLLRLGEEVCKKGCSPSV
SWAGGTGILEFLFKGSTGSSIVPGYDLAYQFLMAQEDVRINASPSVVTMN
QTPARIAVVDEMSIAVSSDKDKAQYNRAQYGIMIKMLPVINVGEEDGKSY
ITLETDITFDTTGKNHDDRPDVTRRNITNKVRIADGETVIIGGLRCKQMS
DSHDGIPFLGDIPGIGKLFGMSSTSDSLTEMFVFITPKILENPVEQQERK
EEALLSSRPGEREEYYQALAASEAAARAAHKKLEMFPASGVSLSQVERQE
YDGC
>gid:25800  CP1087  MotA/TolQ/ExbB proton channel family protein
MVHFSHNPIIQAYTEADFFGKSIFFCLLILSVCTWTVLHQKLAIQKNFLK
AGKSLKDFLIKNRHAPLSLDIHPELSPFADLYFTIKRGTLELLDKNRQSA
PDRGPILSSEDIQSLETLLGAIMPKYKALLHKNSFIPATTISLAPFLGLL
GTVWGILVAFTHISSGSSGNSAIMEGLATALGTTIIGLFVAIPSLIAFNY
LKAHSSELISEIEQTAYLLLNSIEVKYRNTNL
>gid:25801  CP1088  ExbD/TolR family protein
MKYRFTEEIEEEPLVNLTPLIDIVFVILMAFIVAVPLIKLDSIALAPGTQ
EQEVLSSENDSIAVIKVFADHSLTLNEHPITLQELTVRLTLLHKAYPEKT
PLLLQDGETSFRTYQNVKNAIEAAGFHELHVALQN
>gid:25803  CP1090  tolB protein, putative
MLRQLCFQVFFFCFASLVYAEELEVVVRSEHITLPIEVSCQTDTKDPKIQ
KYLSSLTEIFCKDIALGDCLQPTAASKESSSPLAISLRLHVPQLSVVLLQ
SSKTPQTLCSFTISQNLSVDRQKIHHAADTVHYALTGIPGISAGKIVFAL
SSLGKDQKLKQGELWTTDYDGKNLAPLTTECSLSITPKWVGVGSNFPYLY
VSYKYGVPKIFLGSLENTEGKKVLPLKGNQLMPTFSPRKKLLAFVADTYG
NPDLFIQPFSLTSGPMGRPRRLLNENFGTQGNPSFNPEGSQLVFISNKDG
RPRLYIMSLDPEPQAPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQI
CIYDLSSGEDYQLTTSPTNKESPSWAIDSRHLVFSAGNAEESELYLISLV
TKKTNKIAIGVGEKRFPSWGAFPQQPIKRTL