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2024-05-09 11:05:01

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Chlamydophila pneumoniae J138, J138

Number of genes found: 54

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Chlamydophila pneumoniae J138, J138
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
60IM 60 kDa inner membrane proteinRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; Flags: Precursor; chromosome CDS350668 2388 - 0.373116
CPj0818 OmpRecName: Full=Putative outer membrane protein CPn_0818/CP_1053/CPj0818/CpB0847; Flags: Precursor; chromosome CDS927636 372 + 0.392473
CPj0819 CT568 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS928011 447 + 0.431767
CPj0859 CT718 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS976373 537 - 0.433892
CPj0884 CT741 hypothetical proteinRecName: Full=UPF0092 membrane protein CPn_0884/CP_0982/CPj0884/CpB0913; chromosome CDS1008327 354 - 0.384181
CPj1010 CT852 hypothetical proteinRecName: Full=UPF0056 membrane protein CPn_1010/CP_0843/CPj1010/CpB1048; chromosome CDS1155470 609 - 0.410509
CPj1011 CT853 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1156305 408 - 0.436274
clpP_1 CLP proteaseRecName: Full=ATP-dependent Clp protease proteolytic subunit 1; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 1; chromosome CDS600963 576 - 0.404514
clpP_2 CLP protease subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit 2; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 2; chromosome CDS958705 612 - 0.45098
exbB macromolecule transporterSubName: Full=ExbB; SubName: Full=Macromolecule transporter; SubName: Full=MotA/TolQ/ExbB proton channel family protein; chromosome CDS881614 699 - 0.403433
exbD biopolymer transport proteinSubName: Full=Biopolymer Transport Protein; SubName: Full=Biopolymer transport protein; SubName: Full=ExbD; SubName: Full=ExbD/TolR family protein; chromosome CDS881210 408 - 0.428922
ffh signal recognition particle GTPaseSubName: Full=Signal recognition particle GTPase; SubName: Full=Signal recognition particle chain; SubName: Full=Signal recognition particle protein FFH; chromosome CDS146990 1347 + 0.387528
flhA flagellar secretion proteinSubName: Full=Flagellar Secretion Protein; SubName: Full=Flagellar secretion protein; SubName: Full=Protein export protein, FHIPEP family; chromosome CDS407649 1749 - 0.41052
fliF flagellar M-ring proteinSubName: Full=Flagellar M-Ring Protein; SubName: Full=Flagellar M-ring protein; SubName: Full=Flagellar motor switch protein; SubName: Full=Uncharacterized protein; chromosome CDS976926 1026 - 0.387914
fliI flagellum-specific ATP synthaseSubName: Full=Flagellum-specific ATP synthase; chromosome CDS975075 1302 - 0.446237
fliN flagellar motor switch domain/YscQ familySubName: Full=Flagellar Motor Switch Domain/YscQ family; SubName: Full=Flagellar motor switch domain/YscQ family; SubName: Full=Flagellar motor switch protein; SubName: Full=Type III secretion translocase SctQ; chromosome CDS790527 1116 - 0.421147
ftsY cell division protein ftsYRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS1113127 873 - 0.421535
gspD general secretion protein DSubName: Full=General secretion protein D; chromosome CDS922683 2265 + 0.439735
gspE genral secretion protein ESubName: Full=General secretion pathway protein E; SubName: Full=Genral Secretion Protein E; SubName: Full=Genral secretion protein E; SubName: Full=XcpR; chromosome CDS924937 1491 + 0.453387
gspF general secretion protein FSubName: Full=General Secretion Protein F; SubName: Full=General secretion pathway protein F; SubName: Full=General secretion protein F; SubName: Full=XcpS; chromosome CDS926437 1176 + 0.439626
lcrD low calcium response DSubName: Full=Low Calcium Response D; SubName: Full=Low calcium response D; SubName: Full=Type III secretion inner membrane protein SctV; chromosome CDS366953 2133 + 0.428036
lepB signal peptidase ISubName: Full=Signal peptidase I; chromosome CDS141535 1911 - 0.405024
lspA lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS615113 507 + 0.366864
pmp_1 polymorphic outer membrane protein G familyRecName: Full=Probable outer membrane protein pmp1; AltName: Full=Outer membrane protein 6; AltName: Full=Polymorphic membrane protein 1; Flags: Precursor; chromosome CDS4127 2769 + 0.410618
pmp_10 polymorphic outer membrane protein G familyRecName: Full=Probable outer membrane protein pmp10; AltName: Full=Outer membrane protein 5; AltName: Full=Polymorphic membrane protein 10; Flags: Precursor; chromosome CDS504644 2787 - 0.426624
pmp_11 polymorphic outer membrane protein G familyRecName: Full=Probable outer membrane protein pmp11; AltName: Full=Outer membrane protein 4; AltName: Full=Polymorphic membrane protein 11; Flags: Precursor; chromosome CDS507593 2787 + 0.437029
pmp_13 polymorphic outer membrane protein G familyRecName: Full=Probable outer membrane protein pmp13; AltName: Full=Outer membrane protein 14; AltName: Full=Polymorphic membrane protein 13; Flags: Precursor; chromosome CDS512552 2922 + 0.44319
pmp_14 polymorphic outer membrane protein H familyRecName: Full=Probable outer membrane protein pmp14; AltName: Full=Polymorphic membrane protein 14; Flags: Precursor; chromosome CDS515500 2937 + 0.45046
pmp_15 polymorphic outer membrane protein E familyRecName: Full=Probable outer membrane protein pmp15; AltName: Full=Polymorphic membrane protein 15; Flags: Precursor; chromosome CDS533043 2817 + 0.440185
pmp_20 polymorphic membrane protein B FamilyRecName: Full=Probable outer membrane protein pmp20; AltName: Full=Polymorphic membrane protein 20; Flags: Precursor; chromosome CDS621014 5172 + 0.430974
pmp_21 putative outer membrane protein D familyRecName: Full=Probable outer membrane protein pmp21; AltName: Full=Polymorphic membrane protein 21; Flags: Precursor; chromosome CDS1097747 4830 + 0.396273
pmp_2_1 polymorphic outer membrane protein G familyRecName: Full=Probable outer membrane protein pmp2; AltName: Full=Outer membrane protein 7; AltName: Full=Polymorphic membrane protein 2; Flags: Precursor; chromosome CDS18263 2139 + 0.432913
pmp_3_1 polymorphic outer membrane protein G familySubName: Full=Polymorphic outer membrane protein G family; chromosome CDS21043 561 + 0.402852
pmp_3_2 Pmp_3SubName: Full=Outer membrane protein 5; SubName: Full=Pmp_3; chromosome CDS21537 2319 + 0.424321
pmp_4_1 polymorphic outer membrane protein G FamilySubName: Full=Polymorphic outer membrane protein G Family; chromosome CDS24094 1284 + 0.430685
pmp_4_1_2 polymorphic outer membrane protein G FamilySubName: Full=Polymorphic outer membrane protein G Family; chromosome CDS25374 489 + 0.431493
pmp_5_1 polymorphic outer membrane protein G familySubName: Full=Outer membrane protein 11; SubName: Full=Polymorphic outer membrane protein G family; chromosome CDS27193 1485 + 0.443098
pmp_6 polymorphic outer membrane protein G/I familyRecName: Full=Probable outer membrane protein pmp6; AltName: Full=Polymorphic membrane protein 6; Flags: Precursor; chromosome CDS489997 3831 + 0.445054
pmp_7 polymorphic outer membrane protein G familyRecName: Full=Probable outer membrane protein pmp7; AltName: Full=Outer membrane protein 12; AltName: Full=Polymorphic membrane protein 7; Flags: Precursor; chromosome CDS494089 2811 + 0.445749
pmp_9 polymorphic outer membrane protein G/I familyRecName: Full=Probable outer membrane protein pmp9; AltName: Full=Outer membrane protein 10; AltName: Full=Polymorphic membrane protein 9; Flags: Precursor; chromosome CDS499885 2787 + 0.439182
secA_2 protein translocaseRecName: Full=Protein translocase subunit SecA; chromosome CDS951052 2913 + 0.417782
secD_secF protein exportSubName: Full=Protein export; SubName: Full=SecD/SecF fusion protein; SubName: Full=SecDF; SubName: Full=SecDF protein, putative; chromosome CDS649463 4209 - 0.406272
secE preprotein translocaseRecName: Full=Protein translocase subunit SecE; chromosome CDS90772 252 + 0.325397
secY translocaseRecName: Full=Protein translocase subunit SecY; chromosome CDS719805 1374 - 0.39738
sohB proteaseSubName: Full=Protease; SubName: Full=Protease IV, putative; chromosome CDS703976 1002 - 0.416168
tolB macromolecule transporterRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS879091 1296 - 0.422068
yscC YopC/Gen secretion protein DSubName: Full=Outer membrane secretion protein Q; SubName: Full=Probable Yop proteins translocation protein C/general secretion pathway protein; SubName: Full=Type III secretion protein SctC; SubName: Full=YopC/Gen secretion protein D; chromosome CDS786247 2760 - 0.41413
yscJ Yop translocation JSubName: Full=Secretion protein; SubName: Full=Type III secretion protein SctJ; SubName: Full=Yop proteins translocation lipoprotein J; SubName: Full=Yop translocation J; chromosome CDS934585 1008 - 0.430556
yscL Yop translocation LSubName: Full=Translocation protein L; SubName: Full=Type III secretion translocase sctL; SubName: Full=Yop proteins translocation protein L; SubName: Full=Yop translocation L; chromosome CDS932930 702 - 0.388889
yscN YopNSubName: Full=Type III secretion cytoplasmic ATPase SctN; SubName: Full=Yop N; SubName: Full=YopN; SubName: Full=Yops secretion ATPase; chromosome CDS793022 1329 - 0.458239
yscR Yop translocation RSubName: Full=Type III secretion inner membrane protein SctR; SubName: Full=Yop proteins translocation protein R; SubName: Full=Yop translocation R; SubName: Full=YscR; chromosome CDS931995 921 - 0.420195
yscS YopS translocation proteinSubName: Full=Translocation protein S; SubName: Full=Type III secretion inner membrane protein SctS; SubName: Full=Yop proteins translocation protein S; SubName: Full=YopS translocation protein; chromosome CDS931696 288 - 0.385417
yscT YopT tranlocation TSubName: Full=Type III secretion inner membrane protein SctT; SubName: Full=YOP proteins translocation protein T; SubName: Full=Yop proteins translocation protein T; SubName: Full=YopT tranlocation T; SubName: Full=YopT tranlocation protein; chromosome CDS930819 870 - 0.427586
yscU Yop translocation protein USubName: Full=Type III secretion inner membrane protein SctU; SubName: Full=Yop proteins translocation protein U; SubName: Full=Yop translocation protein U; SubName: Full=YopU; chromosome CDS365871 1083 + 0.372115