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2024-05-07 18:42:04

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Escherichia coli O157:H7, O157:H7

Number of genes found: 163

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli O157:H7, O157:H7
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
ECs0022 putative outer membrane usher protein precursorchromosome CDS19298 2451 - 0.410037
ECs0023 putative fimbrial chaperonechromosome CDS21761 684 - 0.365497
ECs0024 putative fimbrial proteinchromosome CDS22494 534 - 0.391386
ECs0030 prolipoprotein signal peptidasechromosome CDS29618 495 + 0.533333
ECs0102 preprotein translocase SecAchromosome CDS112884 2706 + 0.521803
ECs0110 putative integral membrane protein HofCchromosome CDS119011 1203 - 0.522028
ECs0111 putative integral membrane protein HofBchromosome CDS120203 1386 - 0.540404
ECs0112 prelipin peptidase dependent proteinchromosome CDS121598 441 - 0.53288
ECs0143 probable outer membrane porin protein involved in fimbrial assemblychromosome CDS157241 2601 - 0.489043
ECs0144 probable pilin chaperonechromosome CDS159883 726 - 0.483471
ECs0145 putative fimbrial-like proteinchromosome CDS160695 597 - 0.460637
ECs0257 flagellar biosynthesischromosome CDS286244 1740 - 0.585057
ECs0323 hypothetical proteinchromosome CDS342492 588 - 0.528912
ECs0336 putative invasinchromosome CDS353931 4254 + 0.524212
ECs0350 putative adhesinchromosome CDS368426 1095 - 0.426484
ECs0362 AidA-I adhesin-like proteinchromosome CDS379734 3984 + 0.49749
ECs0383 hypothetical proteinchromosome CDS403183 276 + 0.387681
ECs0458 hypothetical proteinchromosome CDS490916 333 + 0.495495
ECs0459 protein-export membrane protein SecDchromosome CDS491276 1848 + 0.532468
ECs0460 protein-export membrane protein secFchromosome CDS493134 972 + 0.51749
ECs0491 ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpPchromosome CDS522729 624 + 0.503205
ECs0540 putative outer membrane transport proteinchromosome CDS579895 1356 + 0.515487
ECs0541 hypothetical proteinchromosome CDS581353 4386 + 0.587779
ECs0542 hypothetical proteinchromosome CDS585946 15876 + 0.611426
ECs0548 adhesin/invasin-like proteinchromosome CDS606274 1017 - 0.485742
ECs0551 hypothetical proteinchromosome CDS608198 456 - 0.58114
ECs0592 putative fimbrial-like proteinchromosome CDS650631 576 + 0.439236
ECs0593 putative chaperonechromosome CDS651426 693 + 0.421356
ECs0594 putative outer membrane proteinchromosome CDS652149 2610 + 0.477012
ECs0596 putative fimbrial-like proteinchromosome CDS655789 516 + 0.496124
ECs0601 bacteriophage N4 adsorption protein NfrBchromosome CDS662098 2238 - 0.524129
ECs0610 putative resistance proteinchromosome CDS678260 1383 + 0.5141
ECs0665 Sec-independent protein translocasechromosome CDS740303 204 + 0.5
ECs0742 putative chaperonechromosome CDS825622 732 - 0.525956
ECs0743 putative outer membrane proteinchromosome CDS826656 2172 - 0.507366
ECs0744 putative fimbrial-like proteinchromosome CDS828877 582 - 0.453608
ECs0772 inner membrane protein TolQchromosome CDS859659 693 + 0.502164
ECs0773 putative inner membrane protein TolRchromosome CDS860355 429 + 0.515152
ECs0775 periplasmic protein TolBchromosome CDS862165 1293 + 0.533643
ECs0829 putative protease/scaffold proteinchromosome CDS907957 2124 + 0.514124
ECs0847 hypothetical proteinchromosome CDS925662 993 + 0.442095
ECs1021 putative fimbrial-like proteinchromosome CDS1127331 549 + 0.420765
ECs1022 putative chaperonechromosome CDS1127962 702 + 0.457265
ECs1027 putative fimbrial-like proteinchromosome CDS1132863 564 + 0.475177
ECs1028 hypothetical proteinchromosome CDS1133392 570 + 0.515789
ECs1108 putative head-tail preconnector proteinchromosome CDS1193749 1506 + 0.604914
ECs1276 putative chaperone proteinchromosome CDS1341919 630 - 0.461905
ECs1278 putative outer membrane usher proteinchromosome CDS1343955 2523 - 0.512882
ECs1280 putative major pilin proteinchromosome CDS1347317 561 - 0.511586
ECs1282 hemagglutinin/hemolysin-related proteinchromosome CDS1349940 3807 + 0.492251
ECs1283 hemolysin activator-related proteinchromosome CDS1353835 1620 + 0.424691
ECs1382 HecB-like proteinchromosome CDS1433646 735 + 0.534694
ECs1396 AidA-I adhesin-like proteinchromosome CDS1444150 2850 + 0.57193
ECs1448 protein of flagellar biosynthesischromosome CDS1488558 417 - 0.479616
ECs1633 minor capsid proteinchromosome CDS1634310 1320 + 0.607576
ECs1667 hypothetical proteinchromosome CDS1664690 705 + 0.512057
ECs1707 hypothetical proteinchromosome CDS1700116 1644 - 0.49635
ECs1844 putative proteasechromosome CDS1830039 1050 + 0.504762
ECs1865 putative outer membrane channel proteinchromosome CDS1857164 1374 + 0.541485
ECs1958 putative antitermination proteinchromosome CDS1939874 555 + 0.463063
ECs2006 putative BigA-like proteinchromosome CDS1984119 3036 + 0.488801
ECs2108 putative fimbrial-like proteinchromosome CDS2109039 504 - 0.446429
ECs2109 putative fimbrial-like proteinchromosome CDS2109555 531 - 0.455744
ECs2110 putative outer membrane proteinchromosome CDS2110099 1149 - 0.448216
ECs2112 putative fimbrial chaperone protein precursorchromosome CDS2112792 711 - 0.459916
ECs2113 putative type 1 fimbrial protein precursorchromosome CDS2113863 564 - 0.468085
ECs2116 putative ATP-binding component of a transport system and adhesin proteinchromosome CDS2116580 1401 - 0.529622
ECs2117 hypothetical proteinchromosome CDS2117977 4032 - 0.493056
ECs2136 hypothetical proteinchromosome CDS2142655 666 - 0.504505
ECs2176 putative minor capsid protein precursorchromosome CDS2176525 1320 - 0.607576
ECs2193 putative ante-terminator proteinchromosome CDS2191067 555 - 0.452252
ECs2373 possible enzymechromosome CDS2344582 1257 - 0.516309
ECs2449 spheroplast protein Ychromosome CDS2424653 486 - 0.506173
ECs2472 protease IVchromosome CDS2448349 1857 + 0.521271
ECs2589 flagellar biosynthesis protein FlhAchromosome CDS2564902 2079 - 0.545455
ECs2590 flagellar biosynthesis protein FlhBchromosome CDS2566973 1149 - 0.548303
ECs2664 flagellar protein FliSchromosome CDS2627824 411 + 0.493917
ECs2676 flagellar hook-basal body complex protein FliEchromosome CDS2637184 315 - 0.536508
ECs2677 flagellar hook-basal body MS ring protein FliFchromosome CDS2637713 1659 + 0.545509
ECs2679 flagellar assembly protein FliHchromosome CDS2640331 708 + 0.572034
ECs2680 flagellum-specific ATP synthasechromosome CDS2641100 1374 + 0.583697
ECs2681 flagellar fliJ proteinchromosome CDS2642492 444 + 0.529279
ECs2685 flagellar motor switch protein FliNchromosome CDS2645634 414 + 0.550725
ECs2687 flagellar biosynthetic protein FliPchromosome CDS2646415 738 + 0.533875
ECs2688 putative export protein FliQchromosome CDS2647162 270 + 0.503704
ECs2689 flagellar biosynthetic protein FliRchromosome CDS2647439 786 + 0.477099
ECs2732 putative head-tail preconnector proteinchromosome CDS2683952 1506 - 0.604914
ECs2775 putative factorchromosome CDS2713479 4008 + 0.505988
ECs2776 hypothetical proteinchromosome CDS2717452 4038 + 0.496285
ECs2909 hypothetical proteinchromosome CDS2860458 348 + 0.408046
ECs2915 putative outer membrane proteinchromosome CDS2864154 2481 - 0.448206
ECs2916 putative chaperonechromosome CDS2866650 675 - 0.38963
ECs2917 putative fimbrial-like proteinchromosome CDS2867412 543 - 0.38674
ECs2960 putative protease/scaffold proteinchromosome CDS2913472 1107 - 0.531165
ECs3081 putative ATP-binding component of a transport systemchromosome CDS3021318 2511 - 0.486659
ECs3087 heme exporter protein Cchromosome CDS3028930 210 - 0.571429
ECs3217 putative fimbrial-like proteinchromosome CDS3176535 549 - 0.448087
ECs3220 putative chaperonechromosome CDS3178031 759 - 0.528327
ECs3221 putative outer membrane proteinchromosome CDS3178812 2640 - 0.545455
ECs3434 signal peptidase Ichromosome CDS3424720 975 - 0.516923
ECs3473 signal recognition particle protein Ffhchromosome CDS3466442 1362 - 0.54185
ECs3515 putative ATP-binding component of a transport systemchromosome CDS3500324 4716 - 0.493427
ECs3682 prepilin peptidase dependent protein Bchromosome CDS3685553 564 - 0.515957
ECs3683 prepilin peptidase dependent protein Achromosome CDS3686107 471 - 0.535032
ECs3716 type III secretion system lipoprotein precursor EprKchromosome CDS3719204 735 - 0.364626
ECs3721 type III secretion protein EprSchromosome CDS3722835 1122 - 0.33066
ECs3722 type III secretion protein EpaR2chromosome CDS3723965 237 - 0.421941
ECs3724 type III secretion protein EpaQchromosome CDS3724734 261 - 0.383142
ECs3725 type III secretion protein EpaPchromosome CDS3725005 666 - 0.345345
ECs3726 type III secretion protein EpaOchromosome CDS3725660 987 - 0.356636
ECs3730 type III secretion protein ATP synthetase EivCchromosome CDS3727907 1320 - 0.446212
ECs3731 type III secretion protein EivAchromosome CDS3729231 2061 - 0.373605
ECs3733 type III secretion protein EivGchromosome CDS3732434 1704 - 0.387911
ECs3827 putative protein transportchromosome CDS3835606 1026 - 0.546784
ECs3889 uptake of enterochelin; tonB-dependent uptake of B colicinschromosome CDS3891175 426 - 0.5
ECs3890 biopolymer transport ExbB proteinchromosome CDS3891607 735 - 0.533333
ECs3923 outer membrane channel TolCchromosome CDS3924203 1488 + 0.516129
ECs4020 putative fimbrial-like proteinchromosome CDS4028966 585 + 0.459829
ECs4021 putative chaperonechromosome CDS4029630 696 + 0.441092
ECs4022 putative outer membrane proteinchromosome CDS4030354 2517 + 0.474374
ECs4026 disrupted fimbrial proteinchromosome CDS4034457 474 + 0.483122
ECs4054 protein-export protein SecGchromosome CDS4064671 333 - 0.504505
ECs4151 hypothetical proteinchromosome CDS4167448 1125 - 0.509333
ECs4165 putative ATPase subunit of translocasechromosome CDS4177778 1332 - 0.496997
ECs4188 leader peptidase HopDchromosome CDS4188661 468 + 0.478632
ECs4233 putative transport porteinchromosome CDS4231661 1239 - 0.54318
ECs4236 hypothetical proteinchromosome CDS4233629 540 - 0.546296
ECs4279 hypothetical proteinchromosome CDS4290870 594 + 0.503367
ECs4280 putative DNA processing chain Achromosome CDS4291509 1203 - 0.502909
ECs4313 cell division membrane proteinchromosome CDS4321994 1497 - 0.53507
ECs4426 putative fimbrial protein precursorchromosome CDS4452553 531 - 0.512241
ECs4431 putative fimbrial major protein precursorchromosome CDS4457511 537 - 0.465549
ECs4480 hypothetical proteinchromosome CDS4519109 4767 + 0.503671
ECs4487 protein export protein SecBchromosome CDS4530493 468 - 0.512821
ECs4559 Gamma intiminchromosome CDS4596458 2805 - 0.426025
ECs4568 type III secretion system protein EscNchromosome CDS4605694 1341 - 0.443699
ECs4569 type III secretion system EscV proteinchromosome CDS4607018 2028 - 0.405325
ECs4573 type III secretion system EscJ proteinchromosome CDS4610343 573 + 0.368237
ECs4575 type III secretion system EscC proteinchromosome CDS4611376 1539 + 0.373619
ECs4580 type III secretion system EscU proteinchromosome CDS4615257 1038 - 0.340077
ECs4581 type III secretion system EscT proteinchromosome CDS4616287 777 - 0.33462
ECs4582 type III secretion system EscS proteinchromosome CDS4617063 270 - 0.385185
ECs4583 type III secretion system EscR proteinchromosome CDS4617332 654 - 0.331804
ECs4586 hypothetical proteinchromosome CDS4619226 324 - 0.314815
ECs4640 60 KD inner-membrane proteinchromosome CDS4671309 1647 + 0.536733
ECs4665 putative fimbrial proteinchromosome CDS4698445 1083 - 0.437673
ECs4667 putative outer membrane usher protein precursorchromosome CDS4700637 2535 - 0.485207
ECs4669 putative fimbrial chaperonechromosome CDS4703495 384 - 0.380208
ECs4670 putative type 1 fimbrial proteinchromosome CDS4703982 603 - 0.44942
ECs4766 Sec-independent protein translocasechromosome CDS4818254 270 + 0.455556
ECs4767 Sec-independent protein translocasechromosome CDS4818527 516 + 0.552326
ECs4768 Sec-independent protein translocasechromosome CDS4819045 777 + 0.517375
ECs4839 hypothetical proteinchromosome CDS4905777 504 + 0.498016
ECs4904 preprotein translocasechromosome CDS4986375 384 + 0.546875
ECs4925 hypothetical proteinchromosome CDS5010088 567 - 0.516755
ECs5062 putative enzymechromosome CDS5152249 1467 - 0.558282
ECs5273 major type 1 subunit fimbrinchromosome CDS5398006 549 + 0.517304
ECs5274 fimbrial proteinchromosome CDS5398511 648 + 0.498457
ECs5275 periplasmic chaperone required for type 1 fimbriaechromosome CDS5399195 726 + 0.444904
ECs5276 export and assembly outer membrane protein of type 1 fimbriaechromosome CDS5399987 2637 + 0.483504
ECs5277 fimbrial morphologychromosome CDS5402633 531 + 0.493409
ECs5278 fimbrial morphologychromosome CDS5403176 504 + 0.525794
ECs5290 putative invasinchromosome CDS5416459 4740 - 0.490928