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2024-05-20 02:14:35

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Bacteroides fragilis YCH46, YCH46

Number of genes found: 88

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bacteroides fragilis YCH46, YCH46
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BF3742 putative biopolymer transport proteinchromosome CDS4248241 822 - 0.416058
NA BF4430 hypothetical proteinchromosome CDS5065345 4524 - 0.474138
NA BF3154 signal peptidase Ichromosome CDS3573884 891 - 0.4422
NA BF1514 putative outer membrane protein OprM precursorchromosome CDS1762525 1473 + 0.476578
NA BF1253 putative outer membrane protein probably involved in nutrient bindingchromosome CDS1487577 3387 + 0.431946
NA BF0526 hypothetical proteinchromosome CDS601382 2316 + 0.430915
NA BF0851 hypothetical proteinchromosome CDS1011566 1518 + 0.502635
NA BF3150 putative outer membrane protein TolCchromosome CDS3566127 1494 - 0.459839
NA BF3108 outer membrane protein oprM precursorchromosome CDS3516403 1377 - 0.461874
NA BF0890 putative Sec-independent protein translocasechromosome CDS1067567 795 - 0.446541
NA BF2333 probable proteasechromosome CDS2695737 1038 + 0.516378
NA BF0123 TraGchromosome CDS127414 2505 - 0.5501
NA BF2182 cation efflux system protein CzcCchromosome CDS2546403 1263 + 0.434679
NA BF1068 preprotein translocase SecA subunitchromosome CDS1287078 3330 - 0.47958
NA BF4026 hypothetical proteinchromosome CDS4599557 1794 - 0.45039
NA BF0181 signal peptidase Ichromosome CDS193555 1485 - 0.451178
NA BF4270 conserved hypothetical proteinchromosome CDS4870401 1029 - 0.434402
NA BF2391 outer membrane efflux protein oprM precursorchromosome CDS2761914 1407 + 0.470505
NA BF0244 conserved hypothetical proteinchromosome CDS266946 780 - 0.401282
NA BF3984 putative alkaline protease AprFchromosome CDS4552977 1455 + 0.468041
NA BF2603 conserved hypothetical proteinchromosome CDS2991338 1857 + 0.455573
NA BF0664 MarC family integral membrane proteinchromosome CDS775428 645 + 0.413953
NA BF2426 recognition particle-docking protein FtsYchromosome CDS2805784 960 - 0.413542
NA BF4562 Smf protein DNA processing chain Achromosome CDS5246546 1122 - 0.499109
NA BF1594 putative outer membrane efflux proteinchromosome CDS1851362 1320 + 0.499242
NA BF3230 conserved hypothetical proteinchromosome CDS3665120 981 - 0.438328
NA BF3965 putative TonB system transport protein ExbD2chromosome CDS4520163 381 - 0.419948
NA BF3888 AcrB/AcrD/AcrF family cation efflux system proteinchromosome CDS4427623 4320 + 0.462037
NA BF2497 conserved hypothetical proteinchromosome CDS2868241 1494 + 0.519411
NA BF2887 hypothetical proteinchromosome CDS3304671 177 + 0.497175
NA BF1873 outer membrane efflux proteinchromosome CDS2200865 1404 - 0.513533
NA BF3313 outer membrane efflux proteinchromosome CDS3775024 1275 + 0.504314
NA BF2691 integral membrane proteinchromosome CDS3095204 603 + 0.485904
NA BF4161 preprotein translocase SecY subunitchromosome CDS4765063 1347 - 0.394209
NA BF4142 outer membrane efflux proteinchromosome CDS4747708 1353 - 0.467849
NA BF2815 putative mobilization proteinchromosome CDS3224026 2187 + 0.465021
NA BF2516 integral membrane proteinchromosome CDS2894064 618 + 0.457929
NA BF0002 putative outer membrane protein TolCchromosome CDS749 1470 + 0.341497
NA BF2367 putative outer membrane protein TolCchromosome CDS2730808 1473 + 0.507128
NA BF4134 MotA/TolQ/ExbB proton channelchromosome CDS4730273 813 - 0.405904
NA BF1358 conserved protein found in conjugate transposonchromosome CDS1596355 2514 - 0.516309
NA BF0180 signal peptidase Ichromosome CDS192612 936 - 0.457265
NA BF2093 outer membrane efflux proteinchromosome CDS2439963 1176 + 0.448129
NA BF4531 hypothetical proteinchromosome CDS5209479 1605 + 0.464797
NA BF1084 putative protein-export membrane proteinchromosome CDS1307368 381 + 0.448819
NA BF3966 putative biopolymer transport protein ExbBchromosome CDS4520656 723 - 0.432918
NA BF4132 conserved hypothetical proteinchromosome CDS4728977 651 - 0.396313
NA BF4520 outer membrane proteinchromosome CDS5186365 1296 - 0.447531
NA BF3739 conserved hypothetical proteinchromosome CDS4246673 465 - 0.397849
NA BF1368 putative mobilization proteinchromosome CDS1606754 2010 + 0.477612
NA BF0891 putative Sec-independent protein translocasechromosome CDS1068438 228 - 0.390351
NA BFp0004 putative mobilization proteinpBFY46 CDS3132 1551 + 0.32882
NA BF3723 conserved hypothetical proteinchromosome CDS4234314 1179 + 0.474131
NA BF2797 conserved hypothetical protein found in conjugate transposon TraGchromosome CDS3207583 2712 + 0.491519
NA BF4133 conserved hypothetical proteinchromosome CDS4729640 606 - 0.424092
NA BF2188 conserved hypothetical proteinchromosome CDS2554159 675 + 0.426667
NA BF3544 multidrug efflux pump channel proteinchromosome CDS4050388 1428 + 0.553221
NA BF1139 conserved hypothetical proteinchromosome CDS1365017 2859 - 0.443861
NA BF4374 carboxy-terminal processing protease precursorchromosome CDS4987180 1686 - 0.459668
NA BF3977 putative Tricorn-like proteasechromosome CDS4542796 3288 - 0.440085
NA BFp0036 putative mobilization proteinpBFY46 CDS25948 1953 + 0.325653
NA BF3584 putative outer membrane protein probably involved in nutrient bindingchromosome CDS4095393 1170 - 0.469231
NA BF3562 hypothetical proteinchromosome CDS4066979 1506 - 0.525896
NA BF1200 conserved hypothetical proteinchromosome CDS1434318 327 + 0.382263
NA BF2659 putative outer membrane proteinchromosome CDS3058969 2427 + 0.428513
NA BF3451 protease IVchromosome CDS3951528 1779 + 0.431141
NA BF0941 hypothetical proteinchromosome CDS1126644 1437 - 0.483646
NA BF3836 hypothetical proteinchromosome CDS4375895 1611 - 0.477964
NA BF2008 conserved hypothetical proteinchromosome CDS2356878 750 - 0.393333
NA BF2277 putative signal peptidasechromosome CDS2651167 633 + 0.35703
NA BF4485 conserved hypothetical proteinchromosome CDS5145719 1662 + 0.421781
NA BF3555 putative ABC-transporter permease proteinchromosome CDS4058909 2313 + 0.432339
NA BF4078 ATP-dependent Clp protease proteolytic subunit 2chromosome CDS4661137 663 - 0.46003
NA BF2631 outer membrane efflux proteinchromosome CDS3024909 1257 - 0.486874
NA BF4198 preprotein translocase SecE subunitchromosome CDS4793532 192 - 0.348958
NA BF0069 putative Tricorn-like proteasechromosome CDS70607 3273 - 0.459212
NA BF0189 outer membrane protein oprM precursorchromosome CDS201905 1392 - 0.482759
NA BF4428 protein-export membrane protein SecD/SecFchromosome CDS5061691 3024 + 0.478836
NA BF2355 hypothetical proteinchromosome CDS2721510 627 - 0.508772
NA BFp0013 conserved hypothetical protein found in conjugate transposon TraJpBFY46 CDS11017 993 + 0.348439
NA BF3360 putative outer membrane proteinchromosome CDS3836500 1470 - 0.455782
NA BF3217 putative signal recognition proteinchromosome CDS3648460 1320 + 0.510606
NA BF1820 conserved hypothetical proteinchromosome CDS2144651 1158 - 0.464594
NA BF0682 putative outer membrane protein TolCchromosome CDS806203 1326 - 0.46908
NA BF3520 hypothetical proteinchromosome CDS4024479 1269 - 0.423168
NA BF0557 putative outer membrane efflux proteinchromosome CDS639035 1332 - 0.454204
NA BF0996 conserved hypothetical proteinchromosome CDS1201998 597 + 0.393635
NA BF3031 putative cell wall biogenesis proteinchromosome CDS3432351 2091 - 0.432329