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2024-05-20 02:12:50

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Yersinia pestis CO92, CO92

Number of genes found: 150

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Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
YPO0146 hypothetical protein chromosome CDS161063 942 + 0.514862
YPO0150 putative membrane transport protein chromosome CDS164004 1125 + 0.481778
YPO0243 conserved hypothetical protein chromosome CDS241590 1122 + 0.486631
YPO0257 possible type III secretion protein chromosome CDS258675 1572 + 0.43257
YPO0263 type III secretion system apparatus lipoprotein chromosome CDS263312 732 + 0.490437
YPO0266 secretion system apparatus protein chromosome CDS265448 2049 + 0.520254
YPO0267 putative type III secretion system ATP synthase chromosome CDS267483 1338 + 0.575486
YPO0269 type III secretion system apparatus protein chromosome CDS269617 921 + 0.543974
YPO0270 putative type III secretion apparatus protein chromosome CDS270664 651 + 0.463902
YPO0271 putative type III secretion apparatus protein chromosome CDS271311 294 + 0.47619
YPO0272 putative type III secretion apparatus protein chromosome CDS271606 795 + 0.515723
YPO0273 putative type III secretion apparatus protein chromosome CDS272390 1068 + 0.4897
YPO0302 putative outer membrane fimbrial usher protein chromosome CDS302675 2379 + 0.461959
YPO0303 putative fimbrial chaperone chromosome CDS305125 744 + 0.435484
YPO0309 putative exported protein chromosome CDS312055 3717 - 0.531612
YPO0587 putative autotransporter protein chromosome CDS632564 2985 - 0.448241
YPO0598 putative hemolysin activator protein chromosome CDS647586 1689 + 0.541741
YPO0599 putative adhesin chromosome CDS649319 9888 + 0.57231
YPO0617 putative membrane protein chromosome CDS678402 1527 - 0.521938
YPO0682 MotA/TolQ/ExbB proton channel family protein chromosome CDS745023 714 + 0.515406
YPO0683 ExbD/TolR-family transport protein chromosome CDS745740 432 + 0.483796
YPO0684 putative membrane protein chromosome CDS746268 1557 - 0.353886
YPO0687 conserved hypothetical protein chromosome CDS748875 735 - 0.365986
YPO0688 putative exported protein chromosome CDS749629 834 - 0.302158
YPO0689 putative membrane protein chromosome CDS750459 876 - 0.332192
YPO0690 putative type II secretion protein chromosome CDS751331 1287 - 0.425796
YPO0691 hypothetical protein chromosome CDS752629 1233 - 0.334955
YPO0695 putative membrane protein chromosome CDS756287 423 - 0.385343
YPO0698 outer membrane usher protein chromosome CDS758430 2481 + 0.503426
YPO0699 fimbrial chaperone protein chromosome CDS760928 720 + 0.488889
YPO0700 Fimbrial protein chromosome CDS761672 1107 + 0.487805
YPO0806 prepilin peptidase chromosome CDS885548 843 - 0.358244
YPO0808 general secretion pathway protein L chromosome CDS886874 1170 - 0.317949
YPO0809 general secretion pathway protein K chromosome CDS888048 957 - 0.314525
YPO0810 general secretion pathway protein J chromosome CDS889013 597 - 0.311558
YPO0811 general secretion pathway protein I chromosome CDS889602 345 - 0.342029
YPO0812 general secretion pathway protein H chromosome CDS889984 543 - 0.3407
YPO0813 general secretion pathway protein G chromosome CDS890531 438 - 0.394977
YPO0815 general secretion pathway protein E chromosome CDS892176 1512 - 0.39418
YPO0816 general secretion pathway protein D chromosome CDS893684 1923 - 0.332813
YPO0902 putative surface protein (partial) chromosome CDS987287 1977 - 0.540718
YPO0940 conserved hypothetical protein chromosome CDS1031548 1077 - 0.481894
YPO1015 putative prepilin peptidase dependent protein chromosome CDS1148051 609 + 0.486043
YPO1387 putative exported protein chromosome CDS1565168 1095 + 0.405479
YPO1388 putative exported protein chromosome CDS1566262 1869 + 0.387373
YPO1672 conserved hypothetical protein chromosome CDS1902800 3807 + 0.530864
YPO1696 probable outer membrane usher protein chromosome CDS1933288 2448 - 0.461193
YPO1697 putative chaperone protein chromosome CDS1935923 753 - 0.446215
YPO1707 putative fimbrial protein chromosome CDS1948363 543 + 0.425414
YPO1708 putative chaperone protein chromosome CDS1949058 780 + 0.441026
YPO1709 putative outer membrane usher protein chromosome CDS1949919 2613 + 0.493685
YPO1710 putative fimbrial protein chromosome CDS1952528 1164 + 0.46134
YPO1711 putative chaperone protein chromosome CDS1953688 804 + 0.482587
YPO1918 probable pili assembly chaperone chromosome CDS2171665 741 - 0.442645
YPO1920 probable fimbrial usher protein chromosome CDS2173767 2592 - 0.494985
YPO1921 probable pili assembly chaperone chromosome CDS2176407 645 - 0.424806
YPO1922 fimbrial protein chromosome CDS2177144 531 - 0.485876
YPO2044 putative hemolysin activator protein chromosome CDS2316429 1674 + 0.367981
YPO2045 putative hemolysin chromosome CDS2318132 4731 + 0.412598
YPO2181 putative membrane protein chromosome CDS2456087 645 + 0.452713
YPO2280 putative phage-related secreted protein chromosome CDS2560790 1245 + 0.452209
YPO2482 hypothetical protein chromosome CDS2784744 453 - 0.470199
YPO2486 conserved hypothetical protein chromosome CDS2786419 2034 - 0.517207
YPO2490 putative hemolysin chromosome CDS2790123 7608 - 0.573344
YPO2491 putative hemolysin activator protein chromosome CDS2797874 1689 - 0.53878
YPO2542 hypothetical protein chromosome CDS2853651 1191 - 0.356843
YPO2759 putative mannose-resistant/Proteus-like fimbrial protein chromosome CDS3092975 531 + 0.463277
YPO2881 putative fimbrial biogenesis protein chromosome CDS3217115 750 - 0.492
YPO2940 fimbrial protein chromosome CDS3282765 555 - 0.430631
YPO2944 putative pili chaperone protein chromosome CDS3287481 780 - 0.411538
YPO2945 frimbrial protein chromosome CDS3288399 546 - 0.443223
YPO3028 putative autotransporter chromosome CDS3381105 2280 + 0.442544
YPO3084 putative membrane protein chromosome CDS3440306 450 + 0.502222
YPO3190 putative membrane protein chromosome CDS3552167 336 - 0.440476
YPO3721 hemolysin chromosome CDS4158112 4908 + 0.445803
YPO3823 putative lipoprotein chromosome CDS4288961 528 + 0.477273
YPO3877 putative fimbrial protein chromosome CDS4352550 531 + 0.436911
YPO3878 putative fimbrial chaperone chromosome CDS4353144 732 + 0.422131
YPO3879 putative outer membrane usher protein chromosome CDS4353903 2628 + 0.471081
YPO3881 putative chaperone protein chromosome CDS4357952 747 + 0.481928
YPO3944 putative invasin chromosome CDS4434982 9042 - 0.511944
YPO3950 putative membrane protein chromosome CDS4448588 585 + 0.466667
YPO4005 putative hemolysin activator protein chromosome CDS4514110 1764 - 0.459184
YPO4006 putative exported protein chromosome CDS4515982 1392 - 0.383621
YPO4041 putative fimbrial chaperone chromosome CDS4557884 768 - 0.427083
YPO4044 fimbrial protein chromosome CDS4561310 558 - 0.460573
YPO4102 probable membrane protein chromosome CDS4621181 1641 + 0.481414
ccmD putative heme exporter protein D chromosome CDS3068520 303 + 0.518152
clpP ATP-dependent Clp protease proteolytic subunit ClpP chromosome CDS3520559 624 - 0.461538
cpxP putative exported protein chromosome CDS84482 489 + 0.466258
ffh signal recognition particle protein chromosome CDS3674224 1362 - 0.483847
flgM negative regulator of flagellin synthesis chromosome CDS2042999 303 - 0.475248
flgN flagella synthesis protein FlgN chromosome CDS2042540 441 - 0.487528
flhA flagellar biosynthesis protein FlhA chromosome CDS2035572 2079 + 0.518037
flhB flagellar biosynthetic protein FlhB chromosome CDS2034412 1161 + 0.525409
flhB putative flagellar assembly protein chromosome CDS768877 1134 - 0.446208
fliE putative flagellar hook-basal body complex protein chromosome CDS774704 381 + 0.514436
fliE flagellar hook-basal body complex protein FliE chromosome CDS2077374 312 + 0.496795
fliF putative flagellar M-ring protein chromosome CDS775094 1641 + 0.502133
fliF flagellar M-ring protein chromosome CDS2075309 1713 - 0.532983
fliH flagellar assembly protein FliH chromosome CDS2073611 717 - 0.548117
fliH putative flagellar assembly protein chromosome CDS777751 720 + 0.538889
fliI flagellum-specific ATP synthase chromosome CDS2072194 1455 - 0.547079
fliI putative flagellum-specific ATP synthase chromosome CDS778463 1341 + 0.580164
fliJ flagellar protein FliJ chromosome CDS2071648 447 - 0.478747
fliN flagellar switch protein chromosome CDS771831 414 - 0.444444
fliN flagellar motor switch protein FliN chromosome CDS2068142 417 - 0.494005
fliP putative flagellar assembly protein chromosome CDS771064 771 - 0.514916
fliP flagellar biosynthetic protein FliP chromosome CDS2066785 741 - 0.51417
fliQ putative flagellar assembly protein chromosome CDS770790 270 - 0.451852
fliQ flagellar biosynthetic protein FliQ chromosome CDS2066410 270 - 0.522222
fliR flagellar biosynthetic protein FliR chromosome CDS2065625 783 - 0.496807
fliR putative flagellar assembly protein chromosome CDS770010 774 - 0.47416
fliS flagellar protein FliS chromosome CDS2084555 399 - 0.466165
fliS putative flagellar protein chromosome CDS801304 381 + 0.388451
ftsY cell division protein chromosome CDS4279876 1626 - 0.483395
hasF ABC-transporter outer membrane component chromosome CDS722560 1404 - 0.47151
hmwA putative adhesin chromosome CDS3614872 5733 - 0.457527
hofB putative type II secretion system protein chromosome CDS3829978 1539 + 0.460689
hofC putative type II secretion system protein chromosome CDS3831513 1200 + 0.455
hxuB putative surface-exposed protein chromosome CDS3620645 1791 - 0.455053
ibeB probable outer membrane efflux lipoprotein chromosome CDS3886836 1407 - 0.509595
lepB signal peptidase I chromosome CDS3045221 999 + 0.49049
lspA lipoprotein signal peptidase chromosome CDS507551 510 + 0.454902
marC multiple antibiotic resistance protein chromosome CDS2737063 684 + 0.438596
ogl oligogalacturonate lyase chromosome CDS1956239 1167 + 0.459297
ppdD putative prepilin peptidase dependent protein D precursor chromosome CDS3829521 465 + 0.447312
psaB chaperone protein PsaB precursor chromosome CDS1463379 822 + 0.377129
psaC outer membrane usher protein PsaC precursor chromosome CDS1464242 2514 + 0.492045
secA preprotein translocase SecA chromosome CDS609376 2715 + 0.48582
secB protein-export protein chromosome CDS77742 477 + 0.484277
secD protein-export membrane protein SecD chromosome CDS3550292 1848 - 0.487554
secE preprotein translocase SecE subunit chromosome CDS4209155 384 - 0.486979
secF protein-export membrane protein SecF chromosome CDS3549313 969 - 0.474716
secG protein-export membrane protein chromosome CDS3909318 336 - 0.482143
secY preprotein translocase SecY subunit chromosome CDS230847 1332 + 0.459459
shlB hemolysin activator protein chromosome CDS4156357 1686 + 0.469158
sohB peptidase family U7 protein chromosome CDS2489189 1047 + 0.483286
sppA protease IV chromosome CDS2431177 1851 - 0.480281
tatA Sec-independent protein translocase protein TatA chromosome CDS4240724 267 - 0.438202
tatB Sec-independent protein translocase protein TatB chromosome CDS4240058 663 - 0.505279
tatC Sec-independent protein translocase protein TatC chromosome CDS4239279 777 - 0.449163
tatE sec-independent protein translocase protein chromosome CDS2918636 258 + 0.465116
tolB TolB colicin import protein chromosome CDS1270189 1293 + 0.4942
tolQ TolQ colicin import protein chromosome CDS1267664 687 + 0.487627
tolR TolR colicin import membrane protein chromosome CDS1268363 429 + 0.468531
yapC putaive autotransporter protein chromosome CDS3125064 1917 + 0.47157
yapE putative autotransporter protein chromosome CDS4485558 3213 - 0.490819
yapF putative autotransporter protein chromosome CDS661725 2286 - 0.547244
yapH putative autotransporter protein chromosome CDS1119829 11118 + 0.529232