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2024-05-08 22:38:17

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Yersinia pestis CO92, CO92

Number of genes found: 150

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
YPO0146 hypothetical proteinchromosome CDS161063 942 + 0.514862
YPO0150 putative membrane transport proteinchromosome CDS164004 1125 + 0.481778
YPO0243 conserved hypothetical proteinchromosome CDS241590 1122 + 0.486631
YPO0257 possible type III secretion proteinchromosome CDS258675 1572 + 0.43257
YPO0263 type III secretion system apparatus lipoproteinchromosome CDS263312 732 + 0.490437
YPO0266 secretion system apparatus proteinchromosome CDS265448 2049 + 0.520254
YPO0267 putative type III secretion system ATP synthasechromosome CDS267483 1338 + 0.575486
YPO0269 type III secretion system apparatus proteinchromosome CDS269617 921 + 0.543974
YPO0270 putative type III secretion apparatus proteinchromosome CDS270664 651 + 0.463902
YPO0271 putative type III secretion apparatus proteinchromosome CDS271311 294 + 0.47619
YPO0272 putative type III secretion apparatus proteinchromosome CDS271606 795 + 0.515723
YPO0273 putative type III secretion apparatus proteinchromosome CDS272390 1068 + 0.4897
YPO0302 putative outer membrane fimbrial usher proteinchromosome CDS302675 2379 + 0.461959
YPO0303 putative fimbrial chaperonechromosome CDS305125 744 + 0.435484
YPO0309 putative exported proteinchromosome CDS312055 3717 - 0.531612
YPO0587 putative autotransporter proteinchromosome CDS632564 2985 - 0.448241
YPO0598 putative hemolysin activator proteinchromosome CDS647586 1689 + 0.541741
YPO0599 putative adhesinchromosome CDS649319 9888 + 0.57231
YPO0617 putative membrane proteinchromosome CDS678402 1527 - 0.521938
YPO0682 MotA/TolQ/ExbB proton channel family proteinchromosome CDS745023 714 + 0.515406
YPO0683 ExbD/TolR-family transport proteinchromosome CDS745740 432 + 0.483796
YPO0684 putative membrane proteinchromosome CDS746268 1557 - 0.353886
YPO0687 conserved hypothetical proteinchromosome CDS748875 735 - 0.365986
YPO0688 putative exported proteinchromosome CDS749629 834 - 0.302158
YPO0689 putative membrane proteinchromosome CDS750459 876 - 0.332192
YPO0690 putative type II secretion proteinchromosome CDS751331 1287 - 0.425796
YPO0691 hypothetical proteinchromosome CDS752629 1233 - 0.334955
YPO0695 putative membrane proteinchromosome CDS756287 423 - 0.385343
YPO0698 outer membrane usher proteinchromosome CDS758430 2481 + 0.503426
YPO0699 fimbrial chaperone proteinchromosome CDS760928 720 + 0.488889
YPO0700 Fimbrial proteinchromosome CDS761672 1107 + 0.487805
YPO0806 prepilin peptidasechromosome CDS885548 843 - 0.358244
YPO0808 general secretion pathway protein Lchromosome CDS886874 1170 - 0.317949
YPO0809 general secretion pathway protein Kchromosome CDS888048 957 - 0.314525
YPO0810 general secretion pathway protein Jchromosome CDS889013 597 - 0.311558
YPO0811 general secretion pathway protein Ichromosome CDS889602 345 - 0.342029
YPO0812 general secretion pathway protein Hchromosome CDS889984 543 - 0.3407
YPO0813 general secretion pathway protein Gchromosome CDS890531 438 - 0.394977
YPO0815 general secretion pathway protein Echromosome CDS892176 1512 - 0.39418
YPO0816 general secretion pathway protein Dchromosome CDS893684 1923 - 0.332813
YPO0902 putative surface protein (partial)chromosome CDS987287 1977 - 0.540718
YPO0940 conserved hypothetical proteinchromosome CDS1031548 1077 - 0.481894
YPO1015 putative prepilin peptidase dependent proteinchromosome CDS1148051 609 + 0.486043
YPO1387 putative exported proteinchromosome CDS1565168 1095 + 0.405479
YPO1388 putative exported proteinchromosome CDS1566262 1869 + 0.387373
YPO1672 conserved hypothetical proteinchromosome CDS1902800 3807 + 0.530864
YPO1696 probable outer membrane usher proteinchromosome CDS1933288 2448 - 0.461193
YPO1697 putative chaperone proteinchromosome CDS1935923 753 - 0.446215
YPO1707 putative fimbrial proteinchromosome CDS1948363 543 + 0.425414
YPO1708 putative chaperone proteinchromosome CDS1949058 780 + 0.441026
YPO1709 putative outer membrane usher proteinchromosome CDS1949919 2613 + 0.493685
YPO1710 putative fimbrial proteinchromosome CDS1952528 1164 + 0.46134
YPO1711 putative chaperone proteinchromosome CDS1953688 804 + 0.482587
YPO1918 probable pili assembly chaperonechromosome CDS2171665 741 - 0.442645
YPO1920 probable fimbrial usher proteinchromosome CDS2173767 2592 - 0.494985
YPO1921 probable pili assembly chaperonechromosome CDS2176407 645 - 0.424806
YPO1922 fimbrial proteinchromosome CDS2177144 531 - 0.485876
YPO2044 putative hemolysin activator proteinchromosome CDS2316429 1674 + 0.367981
YPO2045 putative hemolysinchromosome CDS2318132 4731 + 0.412598
YPO2181 putative membrane proteinchromosome CDS2456087 645 + 0.452713
YPO2280 putative phage-related secreted proteinchromosome CDS2560790 1245 + 0.452209
YPO2482 hypothetical proteinchromosome CDS2784744 453 - 0.470199
YPO2486 conserved hypothetical proteinchromosome CDS2786419 2034 - 0.517207
YPO2490 putative hemolysinchromosome CDS2790123 7608 - 0.573344
YPO2491 putative hemolysin activator proteinchromosome CDS2797874 1689 - 0.53878
YPO2542 hypothetical proteinchromosome CDS2853651 1191 - 0.356843
YPO2759 putative mannose-resistant/Proteus-like fimbrial proteinchromosome CDS3092975 531 + 0.463277
YPO2881 putative fimbrial biogenesis proteinchromosome CDS3217115 750 - 0.492
YPO2940 fimbrial proteinchromosome CDS3282765 555 - 0.430631
YPO2944 putative pili chaperone proteinchromosome CDS3287481 780 - 0.411538
YPO2945 frimbrial proteinchromosome CDS3288399 546 - 0.443223
YPO3028 putative autotransporterchromosome CDS3381105 2280 + 0.442544
YPO3084 putative membrane proteinchromosome CDS3440306 450 + 0.502222
YPO3190 putative membrane proteinchromosome CDS3552167 336 - 0.440476
YPO3721 hemolysinchromosome CDS4158112 4908 + 0.445803
YPO3823 putative lipoproteinchromosome CDS4288961 528 + 0.477273
YPO3877 putative fimbrial proteinchromosome CDS4352550 531 + 0.436911
YPO3878 putative fimbrial chaperonechromosome CDS4353144 732 + 0.422131
YPO3879 putative outer membrane usher proteinchromosome CDS4353903 2628 + 0.471081
YPO3881 putative chaperone proteinchromosome CDS4357952 747 + 0.481928
YPO3944 putative invasinchromosome CDS4434982 9042 - 0.511944
YPO3950 putative membrane proteinchromosome CDS4448588 585 + 0.466667
YPO4005 putative hemolysin activator proteinchromosome CDS4514110 1764 - 0.459184
YPO4006 putative exported proteinchromosome CDS4515982 1392 - 0.383621
YPO4041 putative fimbrial chaperonechromosome CDS4557884 768 - 0.427083
YPO4044 fimbrial proteinchromosome CDS4561310 558 - 0.460573
YPO4102 probable membrane proteinchromosome CDS4621181 1641 + 0.481414
ccmD putative heme exporter protein Dchromosome CDS3068520 303 + 0.518152
clpP ATP-dependent Clp protease proteolytic subunit ClpPchromosome CDS3520559 624 - 0.461538
cpxP putative exported proteinchromosome CDS84482 489 + 0.466258
ffh signal recognition particle proteinchromosome CDS3674224 1362 - 0.483847
flgM negative regulator of flagellin synthesischromosome CDS2042999 303 - 0.475248
flgN flagella synthesis protein FlgNchromosome CDS2042540 441 - 0.487528
flhA flagellar biosynthesis protein FlhAchromosome CDS2035572 2079 + 0.518037
flhB flagellar biosynthetic protein FlhBchromosome CDS2034412 1161 + 0.525409
flhB putative flagellar assembly proteinchromosome CDS768877 1134 - 0.446208
fliE putative flagellar hook-basal body complex proteinchromosome CDS774704 381 + 0.514436
fliE flagellar hook-basal body complex protein FliEchromosome CDS2077374 312 + 0.496795
fliF putative flagellar M-ring proteinchromosome CDS775094 1641 + 0.502133
fliF flagellar M-ring proteinchromosome CDS2075309 1713 - 0.532983
fliH flagellar assembly protein FliHchromosome CDS2073611 717 - 0.548117
fliH putative flagellar assembly proteinchromosome CDS777751 720 + 0.538889
fliI flagellum-specific ATP synthasechromosome CDS2072194 1455 - 0.547079
fliI putative flagellum-specific ATP synthasechromosome CDS778463 1341 + 0.580164
fliJ flagellar protein FliJchromosome CDS2071648 447 - 0.478747
fliN flagellar switch proteinchromosome CDS771831 414 - 0.444444
fliN flagellar motor switch protein FliNchromosome CDS2068142 417 - 0.494005
fliP flagellar biosynthetic protein FliPchromosome CDS2066785 741 - 0.51417
fliP putative flagellar assembly proteinchromosome CDS771064 771 - 0.514916
fliQ flagellar biosynthetic protein FliQchromosome CDS2066410 270 - 0.522222
fliQ putative flagellar assembly proteinchromosome CDS770790 270 - 0.451852
fliR flagellar biosynthetic protein FliRchromosome CDS2065625 783 - 0.496807
fliR putative flagellar assembly proteinchromosome CDS770010 774 - 0.47416
fliS flagellar protein FliSchromosome CDS2084555 399 - 0.466165
fliS putative flagellar proteinchromosome CDS801304 381 + 0.388451
ftsY cell division proteinchromosome CDS4279876 1626 - 0.483395
hasF ABC-transporter outer membrane componentchromosome CDS722560 1404 - 0.47151
hmwA putative adhesinchromosome CDS3614872 5733 - 0.457527
hofB putative type II secretion system proteinchromosome CDS3829978 1539 + 0.460689
hofC putative type II secretion system proteinchromosome CDS3831513 1200 + 0.455
hxuB putative surface-exposed proteinchromosome CDS3620645 1791 - 0.455053
ibeB probable outer membrane efflux lipoproteinchromosome CDS3886836 1407 - 0.509595
lepB signal peptidase Ichromosome CDS3045221 999 + 0.49049
lspA lipoprotein signal peptidasechromosome CDS507551 510 + 0.454902
marC multiple antibiotic resistance proteinchromosome CDS2737063 684 + 0.438596
ogl oligogalacturonate lyasechromosome CDS1956239 1167 + 0.459297
ppdD putative prepilin peptidase dependent protein D precursorchromosome CDS3829521 465 + 0.447312
psaB chaperone protein PsaB precursorchromosome CDS1463379 822 + 0.377129
psaC outer membrane usher protein PsaC precursorchromosome CDS1464242 2514 + 0.492045
secA preprotein translocase SecAchromosome CDS609376 2715 + 0.48582
secB protein-export proteinchromosome CDS77742 477 + 0.484277
secD protein-export membrane protein SecDchromosome CDS3550292 1848 - 0.487554
secE preprotein translocase SecE subunitchromosome CDS4209155 384 - 0.486979
secF protein-export membrane protein SecFchromosome CDS3549313 969 - 0.474716
secG protein-export membrane proteinchromosome CDS3909318 336 - 0.482143
secY preprotein translocase SecY subunitchromosome CDS230847 1332 + 0.459459
shlB hemolysin activator proteinchromosome CDS4156357 1686 + 0.469158
sohB peptidase family U7 proteinchromosome CDS2489189 1047 + 0.483286
sppA protease IVchromosome CDS2431177 1851 - 0.480281
tatA Sec-independent protein translocase protein TatAchromosome CDS4240724 267 - 0.438202
tatB Sec-independent protein translocase protein TatBchromosome CDS4240058 663 - 0.505279
tatC Sec-independent protein translocase protein TatCchromosome CDS4239279 777 - 0.449163
tatE sec-independent protein translocase proteinchromosome CDS2918636 258 + 0.465116
tolB TolB colicin import proteinchromosome CDS1270189 1293 + 0.4942
tolQ TolQ colicin import proteinchromosome CDS1267664 687 + 0.487627
tolR TolR colicin import membrane proteinchromosome CDS1268363 429 + 0.468531
yapC putaive autotransporter proteinchromosome CDS3125064 1917 + 0.47157
yapE putative autotransporter proteinchromosome CDS4485558 3213 - 0.490819
yapF putative autotransporter proteinchromosome CDS661725 2286 - 0.547244
yapH putative autotransporter proteinchromosome CDS1119829 11118 + 0.529232