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2024-05-18 22:40:08

Gene list

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COG category: Signal transduction mechanisms
Genomic element: chromosome 1

Number of genes found: 151

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Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RSP_1357 cytoplasmic sensor hybrid histidine kinasechromosome 1 CDS3133645 2550 + 0.699216
NA RSP_1472 hypothetical proteinchromosome 1 CDS57311 705 + 0.67234
NA RSP_1636 phage-related protein, probable phage tail tape meausure protein, lambda familychromosome 1 CDS229655 5007 - 0.7146
NA RSP_2228 PAS domain containing proteinchromosome 1 CDS844096 531 - 0.681733
NA RSP_1353 hypothetical proteinchromosome 1 CDS3124050 732 + 0.70082
NA RSP_2558 conserved hypothetical proteinchromosome 1 CDS1201456 921 + 0.72747
NA RSP_1274 response regulator receiver proteinchromosome 1 CDS3041859 810 + 0.667901
NA RSP_2130 two component, sigma54 specific transcriptional regulator, fis familychromosome 1 CDS730629 1329 + 0.663657
NA RSP_2280 PAS sensor hybrid histidine kinasechromosome 1 CDS900561 1923 + 0.723349
NA RSP_6148 putative HPT, Histidine Phosphotransfer domainchromosome 1 CDS2981183 330 + 0.660606
NA RSP_0148 Signal transduction histidine kinasechromosome 1 CDS1861665 1053 - 0.694207
NA RSP_2230 response regulator receiver domain proteinchromosome 1 CDS848230 315 + 0.685714
NA RSP_0511 two component transcriptional regulator, LuxR familychromosome 1 CDS2245560 576 + 0.736111
NA RSP_0149 CheY-like receiver proteinchromosome 1 CDS1862714 438 - 0.598173
NA RSP_1502 GAF domain proteinchromosome 1 CDS88207 453 + 0.690949
NA RSP_2756 hypothetical proteinchromosome 1 CDS1404645 585 + 0.711111
NA RSP_1505 Putative Metallo-phosphoesterasechromosome 1 CDS90032 756 - 0.728836
NA RSP_0087 two component transcriptional regulator, LuxRchromosome 1 CDS1797908 633 + 0.624013
NA RSP_1521 conserved hypotheticalchromosome 1 CDS107423 1563 + 0.714651
NA RSP_1682 Two-component sensor histidine kinasechromosome 1 CDS273238 1719 + 0.703898
NA RSP_0171 Response regulator receiver proteinchromosome 1 CDS1887444 369 - 0.666667
NA RSP_1953 Transcriptional regulator, CRP/FNR familychromosome 1 CDS549413 741 - 0.650472
NA RSP_0406 periplasmic sensor diguanylate cyclase (GGDEF)chromosome 1 CDS2139213 1044 - 0.706897
NA RSP_2215 conserved hypothetical proteinchromosome 1 CDS827623 405 - 0.681481
NA RSP_0150 chase sensor signal transducdtion histidine kinasechromosome 1 CDS1863148 1485 - 0.678114
NA RSP_0329 GAF sensor diguanylate cyclase (GGDEF)chromosome 1 CDS2056160 1011 + 0.681503
NA RSP_0813 Response regulator receiver proteinchromosome 1 CDS2555003 702 + 0.749288
NA RSP_0454 multisensor hybrid histidine kinasechromosome 1 CDS2186323 2301 - 0.681443
NA RSP_1056 periplasmic sensor signal transduction histidine kinasechromosome 1 CDS2814112 1401 - 0.708066
NA RSP_2229 Chemotaxis multidomain, CheB methylesterase/CheR, Methylasechromosome 1 CDS844698 3513 + 0.678053
NA RSP_2952 BolA-like proteinchromosome 1 CDS1635374 243 + 0.650206
NA RSP_0410 sensor diguanylate cyclase (GGDEF)chromosome 1 CDS2143501 1008 - 0.710317
NA RSP_0630 conserved hypothetical proteinchromosome 1 CDS2366171 492 - 0.658537
NA RSP_2129 Sensor Histidine kinasechromosome 1 CDS728856 1764 + 0.681406
NA RSP_0085 multisensor hybrid histidine kinasechromosome 1 CDS1794433 2667 - 0.688789
NA RSP_1083 two component transcriptional regulator, winged helix familychromosome 1 CDS2841944 702 - 0.703704
NA RSP_2882 two component transcriptional regulator, LuxR familychromosome 1 CDS1553749 681 - 0.675477
NA RSP_1501 Antisigma-factor antagonist (STAS) domain proteinchromosome 1 CDS87766 348 - 0.672414
NA RSP_1590 two component, sigma54 specific, transcriptional regulator, fis familychromosome 1 CDS182539 1458 - 0.698217
NA RSP_0416 putative calcium-binding EF-hand domain proteinchromosome 1 CDS2151264 657 - 0.73516
NA RSP_0512 multisensor hybrid histidine kinasechromosome 1 CDS2246349 2838 + 0.721987
NA RSP_3000 hypothetical proteinchromosome 1 CDS1697025 312 - 0.439103
NA RSP_2059 Potential phage tail tape measure proteinchromosome 1 CDS651823 5022 - 0.713063
NA RSP_2281 two-component trancriptional regulator, winged helix familychromosome 1 CDS902480 708 + 0.707627
NA RSP_2654 DnaK suppressor protein, DksA familychromosome 1 CDS1297043 477 + 0.63522
NA RSP_1138 two component transcriptional regulator, winged helix familychromosome 1 CDS2900890 699 - 0.692418
NA RSP_1628 possible sensor histidine protein kinasechromosome 1 CDS224676 999 + 0.622623
NA RSP_1629 response regulator receiver domain proteinchromosome 1 CDS225687 390 + 0.630769
NA RSP_0448 EF-Tu; elongation factor Tuchromosome 1 CDS2178615 1821 + 0.67765
NA RSP_2963 transcriptional regulator, Crp-Fnr familychromosome 1 CDS1646777 657 + 0.738204
NA RSP_1271 periplasmic sensor signal transduction histidine kinasechromosome 1 CDS3039191 1782 - 0.695847
NA RSP_1070 conserved hypothetical proteinchromosome 1 CDS2826979 507 + 0.700197
NA RSP_0564 hypothetical proteinchromosome 1 CDS2301525 720 + 0.743056
NA RSP_1979 stress induced morphogen, BolAchromosome 1 CDS571316 258 + 0.682171
NA RSP_0372 ABC basic amino acid transporter, solute-binding proteinchromosome 1 CDS2102691 726 + 0.652893
NA RSP_0316 Transcriptional regulator, LuxR familychromosome 1 CDS2045159 642 + 0.661994
NA RSP_0335 Probable dicyclicGMP cyclasephosphodiesterasechromosome 1 CDS2065080 2370 + 0.705063
NA RSP_1784 response regulator receiver domain proteinchromosome 1 CDS368894 375 - 0.682667
NA RSP_6064 Response regulator receiver domain proteinchromosome 1 CDS1321303 381 - 0.666667
NA RSP_1962 hypothetical proteinchromosome 1 CDS554720 429 + 0.554779
NA RSP_1063 Putative Cyclic-diGMP cyclase/phophodiesterasechromosome 1 CDS2819692 1527 + 0.717092
NA RSP_0830 CBS-domain-containing membrane proteinchromosome 1 CDS2575463 1101 - 0.743869
NA RSP_0221 plasma membrane H+-transporting two-sector ATPase, C subunitchromosome 1 CDS1936160 2538 + 0.572498
NA RSP_0203 signal transduction kinase proteinchromosome 1 CDS1918334 1320 - 0.693939
NA RSP_2030 putative sensor histidine kinasechromosome 1 CDS628243 942 - 0.66879
NA RSP_1683 putative kinase/phosphatasechromosome 1 CDS274953 429 + 0.710956
NA RSP_2407 periplasmic sensor hybrid histidine kinasechromosome 1 CDS1035995 1734 - 0.71511
NA RSP_1210 Response regulator receiver proteinchromosome 1 CDS2979741 1203 - 0.709061
NA RSP_0575 Predicted signal transduction protein containing cyclic nucleotide-binding and CBS domainschromosome 1 CDS2314578 1821 - 0.691927
NA RSP_1011 hypothetical proteinchromosome 1 CDS2769347 324 + 0.675926
NA RSP_0847 two component transcriptional regulator, winged helix familychromosome 1 CDS2597558 687 + 0.608442
NA RSP_0030 PAS sensor diguanylatecyclase/phosphodiesterasechromosome 1 CDS1732315 2502 - 0.691847
NA RSP_1275 Crp-Fnr family transciptional regulatorchromosome 1 CDS3043116 750 + 0.673333
NA RSP_0507 HupR response regulatorchromosome 1 CDS2241068 1476 + 0.700542
NA RSP_1612 Sigma-54 dependent transcriptional regulatorchromosome 1 CDS209722 1320 + 0.72803
NA RSP_0643 periplasmic sensor signal transduction histidine kinasechromosome 1 CDS2382164 1851 + 0.708806
NA RSP_1567 Probable sensory transduction histidine kinasechromosome 1 CDS157676 2568 - 0.714174
NA RSP_0768 transcriptional regulator, LuxR familychromosome 1 CDS2510174 942 - 0.751592
NA RSP_0067 hypothetical proteinchromosome 1 CDS1772617 720 + 0.733333
NA RSP_1611 sensor histidine kinasechromosome 1 CDS207932 1794 + 0.727425
NA RSP_1306 PAS sensor Signal Tranduction Histidine Kinasechromosome 1 CDS3079464 2850 - 0.662807
NA RSP_1314 hypothetical proteinchromosome 1 CDS3087235 363 + 0.713499
NA RSP_0697 Universal stress protein (Usp)chromosome 1 CDS2440493 849 + 0.698469
NA RSP_1500 possible anti-sigma regulatory kinasechromosome 1 CDS87234 543 - 0.723757
NA RSP_1681 two-component transcriptional regulator, winged helix familychromosome 1 CDS272514 702 + 0.643875
NA RSP_2573 conserved hypothetical proteinchromosome 1 CDS1217909 759 + 0.714097
NA RSP_1262 response regulator receiver proteinchromosome 1 CDS3029531 588 - 0.70068
NA RSP_0413 two component diguanylate cyclasechromosome 1 CDS2148157 1386 + 0.735931
PtsN RSP_1158 PTS IIA-like nitrogen-regulatory protein PtsNchromosome 1 CDS2920487 465 + 0.668817
bztA RSP_1747 ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding proteinchromosome 1 CDS328300 1017 + 0.6706
cerI RSP_0123 Autoinducer synthesis proteinchromosome 1 CDS1837350 633 + 0.63981
cheA1 RSP_2436 Chemotaxis histidine protein kinase, CheA1chromosome 1 CDS1068252 2061 - 0.638525
cheA2 RSP_1584 Chemotaxis histidine protein kinasechromosome 1 CDS174724 1965 + 0.688041
cheA3 RSP_0042 Chemotaxis histidine protein kinase, CheA3chromosome 1 CDS1747255 3288 - 0.734185
cheA4 RSP_0049 Chemotaxis histidine protein kinase, CheA4chromosome 1 CDS1756037 1200 - 0.714167
cheB1 RSP_1588 chemotaxis methylesterase, CheB1chromosome 1 CDS178672 1110 + 0.693694
cheB2 RSP_0047 chemotaxis methylesterase, CheB2chromosome 1 CDS1754134 1098 - 0.745902
cheD RSP_2439 putative chemotaxis protein, CheDchromosome 1 CDS1070960 600 - 0.611667
cheR1 RSP_2434 Putative MCP methyltransferase, CheR1chromosome 1 CDS1066878 918 - 0.623094
cheR2 RSP_1587 Chemotaxis methyltransferase, CheR2chromosome 1 CDS177833 837 + 0.622461
cheR3 RSP_0048 MCP methyltransferase, CheR3chromosome 1 CDS1755231 810 - 0.7
cheW1 RSP_2435 Putative chemotaxis scaffold protein, CheW1chromosome 1 CDS1067792 459 - 0.614379
cheW2 RSP_1585 Chemotaxis protein, CheW2chromosome 1 CDS176685 492 + 0.664634
cheW3 RSP_1586 Chemotaxis protein, CheW3chromosome 1 CDS177300 537 + 0.66108
cheW4 RSP_0046 Chemotaxis protein, CheW4chromosome 1 CDS1753606 510 - 0.701961
cheY1 RSP_2437 chemotaxis response regulator, CheY1chromosome 1 CDS1070320 369 - 0.634146
cheY2 RSP_2433 Chemotaxis response regulator, CheY2chromosome 1 CDS1066514 387 - 0.571059
cheY3 RSP_1583 Chemotaxis response regulator, CheY3chromosome 1 CDS174362 366 + 0.625683
cheY5 RSP_2443 putative Chemotaxis response regulator, CheY5chromosome 1 CDS1077763 369 - 0.653117
cheY6 RSP_0043 chemotaxis response regulator, CheY6chromosome 1 CDS1750569 405 - 0.661728
chrR RSP_1093 Anti-sigma factor ChrRchromosome 1 CDS2850158 642 + 0.724299
crpK RSP_2572 crpK, Fnr-type transcriptional regulatorchromosome 1 CDS1216964 792 + 0.670455
ctrA RSP_2621 two component transcriptional regulator, winged helix familychromosome 1 CDS1259527 714 + 0.606443
dctR RSP_0907 two component transcriptional regulator, LuxR familychromosome 1 CDS2656960 609 - 0.712644
dctS RSP_0909 multisensor signal transduction histidine kinasechromosome 1 CDS2657565 1986 - 0.731621
dksA RSP_0166 DnaK suppressor proteinchromosome 1 CDS1882044 318 - 0.654088
fleQ RSP_0071 sigma54 specific transcriptional regulator, fis familychromosome 1 CDS1778935 1230 - 0.685366
flhR RSP_2591 two component transcriptional regulator, LuxR family familychromosome 1 CDS1233459 708 + 0.677966
flhS RSP_2593 hybrid histidine kinasechromosome 1 CDS1235327 1434 + 0.715481
fnrL RSP_0698 Crp-Fnr regulatory protein (FnrL)chromosome 1 CDS2441421 747 - 0.657296
gfdS RSP_2880 signal transduction histidine kinasechromosome 1 CDS1550207 2202 - 0.692552
glnE RSP_2643 Glutamate-ammonia-ligase adenylyltransferasechromosome 1 CDS1283622 2850 + 0.721403
hupT RSP_0491 Hydrogen uptake histidine-kinasechromosome 1 CDS2225114 1332 + 0.719219
kdpD RSP_1268 Osmosensitive K+ channel histidine kinasechromosome 1 CDS3035465 2664 + 0.737237
kdpE RSP_1269 two component transcriptional regulator, winged helix familychromosome 1 CDS3038125 687 + 0.716157
lexA RSP_1997 LexA repressorchromosome 1 CDS596014 687 - 0.672489
mcpA RSP_2440 Methyl accepting chemotaxis proteinchromosome 1 CDS1071682 2313 - 0.641591
mcpB RSP_2442 Methyl accepting chemotaxis protein, McpBchromosome 1 CDS1075992 1683 - 0.680927
mcpM RSP_0218 methyl accepting chemotaxis proteinchromosome 1 CDS1932095 2064 - 0.70155
nifA RSP_0547 NifA transcriptional activatorchromosome 1 CDS2283761 1746 - 0.710195
nnrR RSP_0327 Crp-Fnr regulatory protein (NnrR)chromosome 1 CDS2053920 702 - 0.698006
ntrB RSP_2837 Nitrogen regulation protein, NtrB signal transduction histidine kinasechromosome 1 CDS1473496 1107 - 0.672087
ntrC RSP_2838 nitrogen metabolism transcriptional regulator, NtrCchromosome 1 CDS1472129 1368 - 0.686404
ntrX RSP_2840 Nitrogen assimilation transcriptional regulator, NtrXchromosome 1 CDS1468341 1431 - 0.681342
ntrY RSP_2839 Nitrogen regulation protein, NtrY, Signal transduction histidine kinasechromosome 1 CDS1469768 2310 - 0.689178
osp RSP_0869 response regulator receive proteinchromosome 1 CDS2618532 363 + 0.636364
phoB RSP_2599 Phosphate regulon transcriptional regulator, PhoRchromosome 1 CDS1240670 693 - 0.686869
phoB RSP_0573 Response regulator receiver proteinchromosome 1 CDS2313655 390 - 0.674359
phoR RSP_2915 Probable two-component sensor histidine kinasechromosome 1 CDS1593225 1041 - 0.704131
ppsR RSP_0282 Transcriptional regulator, PpsRchromosome 1 CDS2007910 1395 - 0.680287
prrA RSP_1518 PrrA (RegA), Response regulator involved in oxygen regulation of photosynthesis geneschromosome 1 CDS104574 555 - 0.681081
prrB RSP_1520 Sensor histidine kinase PrrB (RegB)chromosome 1 CDS105908 1389 + 0.681065
ptsI RSP_1850 phosphoenolpyruvate-protein phosphotransferase, PtsI(Ntr)chromosome 1 CDS442635 2244 + 0.687166
spoT/relA RSP_1670 RelA/SpoT family proteinchromosome 1 CDS260559 2118 + 0.656752
tlpC RSP_1589 Transducer-like protein, TlpCchromosome 1 CDS179778 1743 + 0.691337
tlpL RSP_0234 TlpL, putative cytoplasmic chemoreceptorchromosome 1 CDS1953030 1113 - 0.68823
tlpS RSP_2441 Putative transducer like proteinchromosome 1 CDS1074101 1788 - 0.6717
tlpT RSP_0044 putative cytoplasmic chemoreceptor, TlpTchromosome 1 CDS1751177 1704 - 0.733568
torF RSP_0051 Torf proteinchromosome 1 CDS1758112 1137 + 0.725594
tspO RSP_0269 Tryptophan rich sensory proteinchromosome 1 CDS1993234 477 - 0.658281
xoxJ RSP_2580 putative methanol oxidation proteinchromosome 1 CDS1224724 825 + 0.692121