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2024-05-15 17:36:16

Gene list

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COG category: Signal transduction mechanisms
Genomic element: chromosome I

Number of genes found: 208

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Vibrio vulnificus CMCP6, CMCP6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA VV10421 GGDEF domain proteinchromosome I CDS416830 1023 - 0.45259
NA VV10025 Signal transduction histidine kinase regulating C4-dicarboxylate transport systemchromosome I CDS27482 1788 + 0.48434
NA VV13118 Methyl-accepting chemotaxis proteinchromosome I CDS3185804 1140 - 0.478947
NA VV12008 Signal transduction histidine kinasechromosome I CDS2004350 1608 - 0.480721
NA VV12277 GGDEF family proteinchromosome I CDS2294174 1320 - 0.415152
NA VV12053 Conserved hypothetical proteinchromosome I CDS2044234 900 + 0.451111
NA VV12096 Methyl-accepting chemotaxis proteinchromosome I CDS2093287 1881 + 0.472089
NA VV10299 GGDEF domain family proteinchromosome I CDS290747 1566 + 0.47765
NA VV10037 Response regulatorchromosome I CDS42342 729 - 0.506173
NA VV11432 EAL domain proteinchromosome I CDS1414282 1449 + 0.456867
NA VV11576 Guanosine polyphosphate pyrophosphohydrolase/synthetasechromosome I CDS1549544 441 + 0.494331
NA VV11025 Putative cyclohexadienyl dehydratase precursor signal peptide proteinchromosome I CDS1026591 777 + 0.468468
NA VV12199 Methyl-accepting chemotaxis proteinchromosome I CDS2203250 1641 - 0.490555
NA VV12577 Sigma-54 dependent response regulatorchromosome I CDS2613629 1455 + 0.48866
NA VV12290 ABC transporter, periplasmic substrate-binding protein-related proteinchromosome I CDS2311319 558 - 0.482079
NA VV11595 Carbon storage regulatorchromosome I CDS1569649 192 + 0.479167
NA VV11421 FOG: GGDEF domainchromosome I CDS1396431 1440 + 0.429861
NA VV12663 Signal transduction histidine kinasechromosome I CDS2708241 2289 + 0.485802
NA VV10665 Bis(5`-nucleosyl)-tetraphosphatasechromosome I CDS688594 810 + 0.479012
NA VV11575 Guanosine polyphosphate pyrophosphohydrolase/synthetasechromosome I CDS1547758 1701 + 0.496179
NA VV12280 HD-domain proteinchromosome I CDS2299027 1212 + 0.45132
NA VV11648 DnaK suppressor proteinchromosome I CDS1614818 447 - 0.463087
NA VV10267 Phosphate starvation-inducible protein PhoHchromosome I CDS258060 1113 + 0.490566
NA VV13146 FOG: GGDEF domainchromosome I CDS3220067 1974 - 0.455927
NA VV12140 DNA-binding response regulator TorRchromosome I CDS2140524 714 + 0.463585
NA VV11832 Methyl-accepting chemotaxis proteinchromosome I CDS1828116 744 + 0.444892
NA VV11959 Chemotaxis signal transduction proteinchromosome I CDS1950644 495 + 0.436364
NA VV11932 Signal transduction histidine kinasechromosome I CDS1922559 1035 + 0.474396
NA VV12128 Conserved hypothetical proteinchromosome I CDS2128680 249 - 0.409639
NA VV11510 Methyl-accepting chemotaxis proteinchromosome I CDS1486587 513 - 0.499025
NA VV12403 Phosphatidylinositol kinase and protein kinase of the PI-3 kinase familychromosome I CDS2440646 654 + 0.377676
NA VV10519 Phosphoenolpyruvate-protein phosphotransferasechromosome I CDS517769 2091 - 0.48637
NA VV12241 Transcriptional regulatorchromosome I CDS2253894 639 + 0.467919
NA VV10467 Signal transduction histidine kinasechromosome I CDS465885 1209 - 0.4756
NA VV12815 cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinasechromosome I CDS2878781 1053 + 0.452042
NA VV12246 Conserved hypothetical proteinchromosome I CDS2259935 1878 - 0.49361
NA VV12563 CheY-like receiver proteinchromosome I CDS2600430 966 + 0.436853
NA VV12854 GGDEF domainchromosome I CDS2918745 1623 - 0.467652
NA VV11110 FOG: EAL domainchromosome I CDS1110253 3120 + 0.505769
NA VV11608 LuxS protein involved in autoinducer AI2 synthesischromosome I CDS1581799 519 + 0.473988
NA VV13188 FOG: GGDEF domainchromosome I CDS3263498 1377 - 0.40886
NA VV13189 Response regulatorchromosome I CDS3264876 489 - 0.402863
NA VV11956 Chemotaxis proteinchromosome I CDS1947633 1131 + 0.50221
NA VV10550 Sensor histidine kinase FexBchromosome I CDS551417 2343 - 0.461374
NA VV10468 Response regulatorchromosome I CDS467204 690 - 0.481159
NA VV10858 Transcriptional regulator OmpRchromosome I CDS867385 720 - 0.497222
NA VV11720 GGDEF family proteinchromosome I CDS1706711 1089 + 0.46832
NA VV11457 Predicted ATPasechromosome I CDS1443885 1380 - 0.5
NA VV11115 Universal stress protein UspAchromosome I CDS1115966 426 - 0.453052
NA VV11743 Response regulatorchromosome I CDS1731951 729 - 0.438957
NA VV10783 Protein-tyrosine-phosphatasechromosome I CDS794518 441 - 0.453515
NA VV11318 cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinasechromosome I CDS1306153 633 - 0.450237
NA VV11931 FlaK proteinchromosome I CDS1920973 1464 + 0.460383
NA VV12240 Sensor histidine kinasechromosome I CDS2252546 1356 + 0.463127
NA VV13201 Response regulator VieBchromosome I CDS3273083 1485 + 0.320539
NA VV11562 Positive regulator of sigma E activitychromosome I CDS1533076 471 + 0.494692
NA VV10502 Putative regulator of cell autolysischromosome I CDS500229 1683 + 0.479501
NA VV11142 Predicted protein-tyrosine phosphatasechromosome I CDS1141854 510 + 0.572549
NA VV12806 GGDEF domainchromosome I CDS2866333 1260 - 0.473016
NA VV11001 ABC-type amino acid transport, signal transduction systemchromosome I CDS1005550 753 + 0.47012
NA VV12295 Conserved hypothetical proteinchromosome I CDS2315337 1143 + 0.467192
NA VV12868 Methyl-accepting chemotaxis proteinchromosome I CDS2933032 1611 - 0.502173
NA VV12610 cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinasechromosome I CDS2649661 390 - 0.428205
NA VV10826 Methyl-accepting chemotaxis proteinchromosome I CDS833662 1668 - 0.48741
NA VV13203 Response regulator VieAchromosome I CDS3278358 1548 + 0.398579
NA VV12102 ABC-type amino acid transport, signal transduction system, periplasmic component/domainchromosome I CDS2103730 777 + 0.471042
NA VV10614 Glutamine synthetase adenylyltransferasechromosome I CDS627476 2853 - 0.498773
NA VV12211 Conserved hypothetical proteinchromosome I CDS2215515 2424 + 0.475248
NA VV12276 Chemotaxis protein CheYchromosome I CDS2293670 453 + 0.490066
NA VV10893 Predicted signal transduction proteinchromosome I CDS903967 2532 + 0.483412
NA VV11733 Putative membrane GGDEF domain involved in signal transductionchromosome I CDS1722809 1536 + 0.443359
NA VV12315 GGDEF family proteinchromosome I CDS2339764 1314 + 0.446728
NA VV12744 Response regulatorchromosome I CDS2807518 636 - 0.419811
NA VV12107 Methyl-accepting chemotaxis proteinchromosome I CDS2109998 1167 + 0.455013
NA VV11805 Methyl-accepting chemotaxis proteinchromosome I CDS1802382 1614 + 0.311029
NA VV13090 Phosphorelay proteinchromosome I CDS3157324 348 - 0.482759
NA VV11820 BolA-like proteinchromosome I CDS1815339 312 + 0.439103
NA VV12354 Methyl-accepting chemotaxis proteinchromosome I CDS2383474 1545 - 0.505502
NA VV12712 Methyl-accepting chemotaxis proteinchromosome I CDS2759586 1404 + 0.454416
NA VV11246 Response regulatorchromosome I CDS1230114 636 - 0.487421
NA VV10857 Sensor outer membrane protein EnvZchromosome I CDS865994 1299 - 0.518091
NA VV12369 GGDEF family proteinchromosome I CDS2403132 1116 + 0.456989
NA VV11719 c-di-GMP phosphodiesterase A-related proteinchromosome I CDS1704361 2064 - 0.453488
NA VV12567 Methyl-accepting chemotaxis proteinchromosome I CDS2603480 2028 + 0.476331
NA VV10503 Response regulator of the LytR/AlgR familychromosome I CDS501931 729 + 0.493827
NA VV12747 Methyl-accepting chemotaxis proteinchromosome I CDS2810878 1737 + 0.483592
NA VV11978 Phosphohistidine phosphatase SixAchromosome I CDS1971858 465 + 0.488172
NA VV11674 Sensory box sensor histidine kinase/response regulatorchromosome I CDS1651671 3390 - 0.466962
NA VV12644 Activator of osmoprotectant transporter ProPchromosome I CDS2686505 660 - 0.442424
NA VV12658 Anti-anti-sigma regulatory factorchromosome I CDS2703421 321 + 0.457944
NA VV11933 Response regulatorchromosome I CDS1923620 1416 + 0.511299
NA VV12321 GGDEF family proteinchromosome I CDS2348545 1407 + 0.467662
NA VV11953 Chemotaxis proteinchromosome I CDS1944137 369 + 0.430894
NA VV10036 Signal transduction histidine kinasechromosome I CDS40894 1437 - 0.507307
NA VV12816 Signal transduction histidine kinasechromosome I CDS2879895 831 + 0.452467
NA VV10227 Methylase of chemotaxis methyl-accepting protein CheRchromosome I CDS219578 828 - 0.468599
NA VV12255 Methyl-accepting chemotaxis proteinchromosome I CDS2270177 1626 - 0.496925
NA VV10525 Sigma-54 dependent transcriptional regulatorchromosome I CDS524182 1335 - 0.466667
NA VV13128 Signal transduction histidine kinasechromosome I CDS3197445 2157 - 0.463143
NA VV12583 Methyl-accepting chemotaxis proteinchromosome I CDS2622347 1863 - 0.481481
NA VV12024 Phosphatidylinositol kinase and protein kinase of the PI-3 kinase familychromosome I CDS2015847 567 - 0.389771
NA VV10390 SOS-response transcriptional repressor LexA-like proteinchromosome I CDS370238 414 + 0.405797
NA VV10912 Predicted signal transduction proteinchromosome I CDS925838 828 - 0.460145
NA VV11132 FOG: EAL domainchromosome I CDS1131113 2490 + 0.511245
NA VV12057 Methyl-accepting chemotaxis proteinchromosome I CDS2047395 498 + 0.51004
NA VV10852 Guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolasechromosome I CDS859170 2121 + 0.512966
NA VV11511 Methyl-accepting chemotaxis proteinchromosome I CDS1487035 1179 - 0.475827
NA VV12108 Methyl-accepting chemotaxis proteinchromosome I CDS2111148 318 + 0.493711
NA VV11139 Predicted signal transduction proteinchromosome I CDS1139158 1224 + 0.487745
NA VV10646 Sensory box/GGDEF family proteinchromosome I CDS664708 1881 - 0.458798
NA VV10186 Methyl-accepting chemotaxis proteinchromosome I CDS176641 1881 - 0.493886
NA VV11239 Predicted signal-transduction proteinchromosome I CDS1218472 1809 - 0.500829
NA VV10615 Methyl-accepting chemotaxis proteinchromosome I CDS630434 1257 - 0.498807
NA VV10620 SH3 domain proteinchromosome I CDS636574 612 + 0.468954
NA VV10891 Nitrogen regulation protein NtrBchromosome I CDS901411 1011 + 0.493571
NA VV12092 Conserved hypothetical proteinchromosome I CDS2088659 1935 - 0.458398
NA VV11560 Negative regulator of sigma E activitychromosome I CDS1531485 621 + 0.489533
NA VV11097 Response regulatorchromosome I CDS1096666 897 + 0.492754
NA VV12333 Pilus assembly protein CpaE-like proteinchromosome I CDS2360568 1077 + 0.512535
NA VV12609 Universal stress protein UspAchromosome I CDS2648582 792 - 0.455808
NA VV11714 c-di-GMP phosphodiesterase A-related proteinchromosome I CDS1700066 1890 - 0.474603
NA VV12055 Methyl-accepting chemotaxis proteinchromosome I CDS2046020 1245 + 0.482731
NA VV12009 Response regulatorchromosome I CDS2005954 786 - 0.470738
NA VV10150 Signal transduction histidine kinasechromosome I CDS135564 3405 - 0.456681
NA VV13021 Protein-tyrosine-phosphatasechromosome I CDS3086041 435 - 0.478161
NA VV12848 Signal transduction histidine kinasechromosome I CDS2913476 1350 + 0.495556
NA VV12880 Transcriptional regulatorchromosome I CDS2946966 1038 + 0.495183
NA VV11815 Putative transcriptional activatorchromosome I CDS1810577 669 + 0.469357
NA VV10501 Carbon starvation protein, predicted membrane proteinchromosome I CDS498576 1485 + 0.498316
NA VV11095 Serine/threonine protein kinasechromosome I CDS1094281 1335 - 0.510861
NA VV12273 Conserved hypothetical proteinchromosome I CDS2290239 417 + 0.479616
NA VV12719 GGDEF domainchromosome I CDS2774515 1935 + 0.451163
NA VV12578 Signal transduction histidine kinasechromosome I CDS2615124 1983 + 0.476046
NA VV12685 Response regulator of citrate/malate metabolismchromosome I CDS2733158 687 - 0.486172
NA VV10892 Response regulator for NtrBchromosome I CDS902440 1410 + 0.517021
NA VV11572 GGDEF domain proteinchromosome I CDS1542025 1260 + 0.45873
NA VV12281 GGDEF family proteinchromosome I CDS2300423 2736 + 0.465278
NA VV12664 Response regulatorchromosome I CDS2710686 1494 + 0.486613
NA VV10126 Response regulatorchromosome I CDS112135 669 - 0.479821
NA VV13054 Response regulatorchromosome I CDS3123713 645 - 0.43876
NA VV12734 ABC-type amino acid transport, signal transduction systems, periplasmic component/domainchromosome I CDS2795867 3072 - 0.48763
NA VV12611 cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinasechromosome I CDS2650076 333 - 0.414414
NA VV12288 HDIG domain proteinchromosome I CDS2308758 1269 - 0.466509
NA VV10694 Phosphotransferase system mannitol/fructose-specific IIA domainchromosome I CDS712988 447 + 0.483221
NA VV12863 Transcriptional regulatorchromosome I CDS2926702 1530 + 0.494771
NA VV12759 Response regulatorchromosome I CDS2824419 489 + 0.451943
NA VV12821 Predicted signal transduction proteinchromosome I CDS2883243 921 + 0.431053
NA VV10026 Response regulatorchromosome I CDS29271 1341 + 0.483221
NA VV10040 Methyl-accepting chemotaxis proteinchromosome I CDS44888 1635 - 0.500306
NA VV13202 Sensory box sensor histidine kinase/response regulator VieSchromosome I CDS3274614 3660 + 0.361749
NA VV12817 CheY-like receiverchromosome I CDS2880718 363 + 0.4573
NA VV12764 ABC-type amino acid transport, signal transduction systems, periplasmic component/domainchromosome I CDS2827392 762 - 0.458005
NA VV13142 Methyl-accepting chemotaxis proteinchromosome I CDS3213283 2037 + 0.478154
NA VV10814 Putative KDO kinase WavCchromosome I CDS823656 711 - 0.464135
NA VV10888 GTP-binding TypA-like proteinchromosome I CDS896737 1830 - 0.48306
NA VV13119 FOG: HPt domainchromosome I CDS3187073 1335 - 0.466667
NA VV12703 ABC-type amino acid transport, signal transduction systems, periplasmic component/domainchromosome I CDS2752967 1029 + 0.474247
NA VV11573 Signal transduction histidine kinasechromosome I CDS1543387 2787 - 0.502332
NA VV13091 LUXO_VIBHA Repressor protein luxOchromosome I CDS3157671 1401 - 0.477516
NA VV12228 GGDEF family proteinchromosome I CDS2239841 1419 + 0.455955
NA VV11561 Negative regulator of sigma E activitychromosome I CDS1532102 978 + 0.480573
NA VV11656 Sugar diacid utilization regulatorchromosome I CDS1628849 1197 - 0.451128
NA VV10729 cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinasechromosome I CDS747534 564 + 0.453901
NA VV12089 Conserved hypothetical proteinchromosome I CDS2084978 789 + 0.457541
NA VV11253 Signal transduction histidine kinasechromosome I CDS1237968 1389 - 0.511159
NA VV12656 FOG: GGDEF domainchromosome I CDS2700109 1863 - 0.457327
NA VV12244 Methyl-accepting chemotaxis proteinchromosome I CDS2257247 1884 + 0.507962
NA VV11166 SOS-response transcriptional repressorchromosome I CDS1160001 624 + 0.498397
NA VV11954 Chemotaxis proteinchromosome I CDS1944627 741 + 0.460189
NA VV12066 Methyl-accepting chemotaxis proteinchromosome I CDS2060781 1968 - 0.48374
NA VV10551 GGDEF domain proteinchromosome I CDS553990 1776 - 0.501689
NA VV12723 Methyl-accepting chemotaxis proteinchromosome I CDS2779152 1560 + 0.478846
NA VV12686 Signal transduction histidine kinase regulating citrate/malate metabolismchromosome I CDS2733841 1620 - 0.490123
NA VV12911 Predicted signal transduction proteinchromosome I CDS2977953 1215 + 0.443621
NA VV12275 Sensor histidine kinasechromosome I CDS2292322 1356 + 0.484513
NA VV11254 Response regulatorchromosome I CDS1239360 684 - 0.491228
NA VV12748 Response regulatorchromosome I CDS2812880 1161 + 0.462532
NA VV12879 Phage shock protein Achromosome I CDS2946064 672 - 0.438988
NA VV12564 GGDEF domain containing proteinchromosome I CDS2601392 963 + 0.438214
NA VV11774 Methyl-accepting chemotaxis proteinchromosome I CDS1766173 1584 + 0.517677
NA VV10677 Universal stress protein UspAchromosome I CDS700582 438 + 0.46347
NA VV12847 Response regulatorchromosome I CDS2912827 660 + 0.477273
NA VV12179 Sensor histidine kinasechromosome I CDS2180852 2322 + 0.477175
NA VV11829 Response regulatorchromosome I CDS1823442 1251 - 0.445244
NA VV12061 GGDEF family proteinchromosome I CDS2054278 969 - 0.478844
NA VV11955 Chemotaxis proteinchromosome I CDS1945377 2226 + 0.500898
NA VV10993 Predicted signal transduction proteinchromosome I CDS996201 2094 + 0.455587
NA VV12263 Guanylate cyclase-related proteinchromosome I CDS2278870 558 + 0.46595
NA VV10548 Aerobic respiration control protein FexAchromosome I CDS550174 717 + 0.475593
NA VV12645 GAF domain-containing proteinchromosome I CDS2687228 474 - 0.436709
NA VV12259 Sensory box/GGDEF family proteinchromosome I CDS2273185 1677 - 0.443649
NA VV12158 Methyl-accepting chemotaxis proteinchromosome I CDS2163106 1461 + 0.498289
NA VV12109 Methyl-accepting chemotaxis proteinchromosome I CDS2111440 681 + 0.496329
NA VV12990 FOG: CheY-like receiverchromosome I CDS3057393 942 - 0.44586
NA VV10228 CheY/CheV hybrid protein CheWchromosome I CDS220419 927 - 0.448759
NA VV11489 HD-GYP domainchromosome I CDS1476569 1257 + 0.420843
NA VV12877 Putative stress-responsive transcriptional regulatorchromosome I CDS2945433 390 - 0.448718
NA VV12359 Conserved hypothetical proteinchromosome I CDS2389087 837 - 0.471924
NA VV11255 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated proteinchromosome I CDS1240232 516 + 0.488372
NA VV10125 Signal transduction histidine kinasechromosome I CDS110907 1257 - 0.46778
NA VV11999 Response regulatorchromosome I CDS1996111 1107 + 0.463415
NA VV12278 Predicted signal transduction proteinchromosome I CDS2295747 1716 - 0.440559
NA VV11507 Methyl-accepting chemotaxis proteinchromosome I CDS1484943 612 - 0.428105
NA VV12249 Conserved hypothetical proteinchromosome I CDS2264189 1455 - 0.470103
NA VV12264 Probable sensor/response regulator hybridchromosome I CDS2279420 1716 + 0.475524
NA VV13127 Response regulatorchromosome I CDS3196492 915 - 0.465574
NA VV12622 Signal transduction histidine kinasechromosome I CDS2659420 1725 + 0.422029
NA VV11230 Methyl-accepting chemotaxis proteinchromosome I CDS1208682 1641 - 0.521633