Gene list
Applied filters:
COG category: Signal transduction mechanisms
Genomic element: chromosome
Number of genes found: 181
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BF4103 | putative two-component response regulator autolysis regulator LytR | chromosome | CDS | 4831461 | 765 | + | 0.405229 |
NA | BF3155 | putative two-component system sensor kinase/response regulator fusion protein | chromosome | CDS | 3690596 | 3993 | + | 0.428249 |
NA | BF3745 | putative membrane protein | chromosome | CDS | 4418053 | 969 | + | 0.406605 |
NA | BF4113 | putative AraC-family transcriptional regulator | chromosome | CDS | 4841827 | 897 | + | 0.386845 |
NA | BF0976 | putative anti-sigma factor | chromosome | CDS | 1221185 | 1008 | + | 0.429563 |
NA | BF1447 | putative two-component system sensor histidine kinase | chromosome | CDS | 1713939 | 2613 | + | 0.457711 |
NA | BF0183 | conserved hypothetical protein | chromosome | CDS | 199179 | 714 | + | 0.407563 |
NA | BF3053 | putative two-component system sensor histidine kinase | chromosome | CDS | 3550759 | 1851 | + | 0.462993 |
NA | BF2449 | putative two component system histidine kinase | chromosome | CDS | 2839030 | 1278 | - | 0.497653 |
NA | BF4286 | putative two-component system sensor kinase/response regulator fusion protein | chromosome | CDS | 5088415 | 3990 | - | 0.402256 |
NA | BF2241 | putative two component system response regulator | chromosome | CDS | 2619192 | 675 | + | 0.46963 |
NA | BF3089 | putative two-component system histidine kinase/response regulator fusion protein | chromosome | CDS | 3598557 | 2925 | + | 0.49641 |
NA | BF1344 | putative transcriptional regulatory protein | chromosome | CDS | 1605693 | 678 | - | 0.430678 |
NA | BF4153 | putative two-component regulator sensor histidine kinase transcriptional regulator | chromosome | CDS | 4889725 | 1554 | + | 0.449807 |
NA | BF3901 | putative LuxR-family regulatory protein | chromosome | CDS | 4591426 | 648 | - | 0.435185 |
NA | BF1203 | putative anti-sigma factor | chromosome | CDS | 1462873 | 930 | + | 0.419355 |
NA | BF4270 | putative anti-sigma factor | chromosome | CDS | 5071011 | 921 | - | 0.391965 |
NA | BF4110 | putative transcriptional regulator GerE, LuxR family | chromosome | CDS | 4839348 | 837 | + | 0.391876 |
NA | BF2789 | conserved hypothetical protein | chromosome | CDS | 3246943 | 2376 | - | 0.546296 |
NA | BF4131 | putative anti-sigma factor | chromosome | CDS | 4859762 | 933 | + | 0.40836 |
NA | BF0276 | putative two-component system sensor histidine kinase/response regulator fusion protein | chromosome | CDS | 306379 | 3990 | + | 0.449373 |
NA | BF3197 | putative two component system, sensor protein | chromosome | CDS | 3752035 | 1170 | - | 0.447009 |
NA | BF0401 | putative transmembrane protein | chromosome | CDS | 488434 | 1071 | + | 0.364146 |
NA | BF0552 | putative LuxR family transcriptional regulator | chromosome | CDS | 658180 | 600 | - | 0.528333 |
NA | BF0135 | conserved hypothetical protein | chromosome | CDS | 142059 | 1056 | - | 0.460227 |
NA | BF0164 | putative two-component system, response regulator protein | chromosome | CDS | 175859 | 678 | - | 0.348083 |
NA | BF1606 | putative two-component response regulator transcriptional regulatory protein | chromosome | CDS | 1867875 | 1338 | - | 0.51719 |
NA | BF2252 | putative two component system response regulator | chromosome | CDS | 2630694 | 696 | - | 0.449713 |
NA | BF1932 | putative transmembrane protein | chromosome | CDS | 2252694 | 1053 | - | 0.477683 |
NA | BF2686 | putative DNA-binding response regulator | chromosome | CDS | 3128110 | 609 | - | 0.441708 |
NA | BF1872 | putative two-component histidine sensor kinase | chromosome | CDS | 2185269 | 1914 | + | 0.492685 |
NA | BF3755 | putative membrane protein | chromosome | CDS | 4435143 | 942 | - | 0.433121 |
NA | BF0970 | putative anti-sigma factor | chromosome | CDS | 1211887 | 1026 | + | 0.45809 |
NA | BF2954 | conserved hypothetical protein | chromosome | CDS | 3435789 | 783 | + | 0.418902 |
NA | BF0668 | putative histidine kinase | chromosome | CDS | 810853 | 1170 | + | 0.433333 |
NA | BF3174 | putative two-component system sensor kinase/response regulator fusion protein | chromosome | CDS | 3718525 | 2724 | - | 0.508443 |
NA | BF0527 | putative two-component response regulator-like protein | chromosome | CDS | 618260 | 1344 | + | 0.463542 |
NA | BF0231 | putative regulatory protein | chromosome | CDS | 254040 | 1149 | - | 0.392515 |
NA | BF3164 | putative two-component regulator sensor kinase | chromosome | CDS | 3704567 | 2271 | + | 0.457948 |
NA | BF3196 | putative two-component system, response regulator | chromosome | CDS | 3751301 | 738 | - | 0.449865 |
NA | BF2094 | putative two-component sensor histidine kinase protein | chromosome | CDS | 2448812 | 1320 | - | 0.506061 |
NA | BF2282 | putative two component system response regulator | chromosome | CDS | 2674949 | 729 | + | 0.414266 |
NA | BF0823 | putative transmembrane protein | chromosome | CDS | 1015679 | 2043 | + | 0.419971 |
NA | BF4262 | putative two-component sensor histidine kinase with PAS domain | chromosome | CDS | 5057058 | 1569 | - | 0.427661 |
NA | BF1309 | putative anti-sigma factor | chromosome | CDS | 1568804 | 1023 | + | 0.426197 |
NA | BF0782 | putative two-component system sensor histidine kinase | chromosome | CDS | 959599 | 2760 | + | 0.476449 |
NA | BF3660 | putative membrane protein | chromosome | CDS | 4320558 | 1086 | + | 0.434622 |
NA | BF3411 | putative regulatory protein | chromosome | CDS | 4022940 | 990 | + | 0.462626 |
NA | BF0949 | conserved hypothetical protein, possible C-terminal metal binding site | chromosome | CDS | 1184760 | 636 | - | 0.422956 |
NA | BF0365 | putative FNR-family transcriptional regulatory protein | chromosome | CDS | 441547 | 687 | + | 0.426492 |
NA | BF0902 | putative transmembrane and transcriptional regulatory protein | chromosome | CDS | 1130439 | 843 | + | 0.47331 |
NA | BF0841 | putative phosphate starvation-inducible PhoH-like protein | chromosome | CDS | 1034451 | 1014 | - | 0.42998 |
NA | BF0486 | putative two-component histidine sensor kinase | chromosome | CDS | 562485 | 1236 | + | 0.397249 |
NA | BF2095 | putative two-component response regulator transcriptional regulatory protein | chromosome | CDS | 2450151 | 1398 | - | 0.505007 |
NA | BF0335 | putative two-component system sensor histidine kinase | chromosome | CDS | 401513 | 1650 | + | 0.376364 |
NA | BF2495 | conserved hypothetical protein | chromosome | CDS | 2903453 | 1122 | - | 0.361854 |
NA | BF2753 | putative two component system response regulator | chromosome | CDS | 3210499 | 678 | + | 0.471976 |
NA | BF2253 | putative two component system sensor histidine kinase | chromosome | CDS | 2631386 | 1467 | - | 0.446489 |
NA | BF2723 | putative two-component system histidne kinase/reponse regulator fusion protein | chromosome | CDS | 3167918 | 3048 | + | 0.457677 |
NA | BF2839 | putative two-component system, histidine kinase | chromosome | CDS | 3299345 | 843 | - | 0.42586 |
NA | BF1413 | putative anti-sigma factor | chromosome | CDS | 1678667 | 936 | + | 0.339744 |
NA | BF0502 | putative anti-sigma factor | chromosome | CDS | 584837 | 930 | - | 0.429032 |
NA | BF1139 | putative two-component system sensor histidine kinase/response regulator fusion protein | chromosome | CDS | 1398685 | 1914 | + | 0.411703 |
NA | BF2173 | putative two-component regulatory system histidine kinase | chromosome | CDS | 2528984 | 1536 | - | 0.421224 |
NA | BF0914 | putative anti-sigma factor | chromosome | CDS | 1144843 | 1107 | + | 0.416441 |
NA | BF2959 | conserved hypothetical protein | chromosome | CDS | 3441006 | 216 | + | 0.416667 |
NA | BF2843 | putative anti-anti sigma factor | chromosome | CDS | 3305079 | 306 | - | 0.401961 |
NA | BF3162 | putative carbon starvation-related membrane protein | chromosome | CDS | 3701268 | 1428 | - | 0.495098 |
NA | BF1874 | putative GAF-domain signal transduction protein | chromosome | CDS | 2189045 | 474 | + | 0.487342 |
NA | BF2647 | putative two-component system sensor kinase/response regulator fusion protein | chromosome | CDS | 3078898 | 3069 | - | 0.423591 |
NA | BF1387 | putative transmembrane AraC family transcriptional regulator | chromosome | CDS | 1653695 | 1818 | + | 0.429043 |
NA | BF4150 | putative two-component system sensor kinase/response regulator fusion protein | chromosome | CDS | 4883986 | 1674 | - | 0.437276 |
NA | BF2242 | putative two component system sensor histidine kinase | chromosome | CDS | 2619884 | 1338 | + | 0.466368 |
NA | BF3661 | putative response regulator | chromosome | CDS | 4321640 | 780 | + | 0.448718 |
NA | BF2849 | conserved hypothetical PhoH-like protein | chromosome | CDS | 3310586 | 1326 | - | 0.446456 |
NA | BF3597 | conserved hypothetical protein | chromosome | CDS | 4245158 | 570 | + | 0.454386 |
NA | BF1829 | putative transmembrane protein | chromosome | CDS | 2136629 | 870 | - | 0.406897 |
NA | BF3292 | conserved hypothetical protein | chromosome | CDS | 3877204 | 624 | - | 0.307692 |
NA | BF2190 | putative two component system histidine kinase/response regulator fusion protein | chromosome | CDS | 2545403 | 1128 | + | 0.397163 |
NA | BF3850 | putative regulatory protein | chromosome | CDS | 4536288 | 1287 | - | 0.366744 |
NA | BF3098 | putative anti-sigma factor | chromosome | CDS | 3616393 | 999 | - | 0.421421 |
NA | BF4032 | putative low molecular weight protein-tyrosine-phosphatase | chromosome | CDS | 4736337 | 474 | - | 0.5 |
NA | BF2908 | putative membrane protein | chromosome | CDS | 3379633 | 1026 | - | 0.38499 |
NA | BF1176 | hypothetical protein | chromosome | CDS | 1432829 | 684 | - | 0.334795 |
NA | BF4102 | putative two-component sensor histidine kinase transcriptional regulator | chromosome | CDS | 4830901 | 561 | + | 0.44385 |
NA | BF3855 | putative regulatory protein | chromosome | CDS | 4543520 | 564 | - | 0.33156 |
NA | BF1513 | putative anti-sigma factor | chromosome | CDS | 1774999 | 957 | - | 0.416928 |
NA | BF0470 | hypothetical protein | chromosome | CDS | 546522 | 1143 | + | 0.306212 |
NA | BF2250 | putative exported protein | chromosome | CDS | 2629296 | 534 | - | 0.468165 |
NA | BF0808 | putative two-component system sensor histidine kinase/response regulator fusion protein | chromosome | CDS | 992927 | 4086 | + | 0.38326 |
NA | BF1878 | putative DNA-binding cyclic-nucleotide binding protein | chromosome | CDS | 2193383 | 582 | - | 0.45189 |
NA | BF0395 | putative two-component system sensor histidine kinase | chromosome | CDS | 483767 | 2016 | - | 0.428075 |
NA | BF1489 | putative conserved TraI-like protein found in conjugate transposon | chromosome | CDS | 1752281 | 522 | + | 0.519157 |
NA | BF2842 | putative anti sigma factor | chromosome | CDS | 3304636 | 429 | - | 0.417249 |
NA | BF1451 | putative two component sensor histidine kinase protein | chromosome | CDS | 1720021 | 1293 | + | 0.470224 |
NA | BF1970 | possible anti-sigma factor | chromosome | CDS | 2300179 | 879 | + | 0.356086 |
NA | BF3929 | putative two-component response regulator transcriptional regulatory protein | chromosome | CDS | 4635528 | 1344 | + | 0.448661 |
NA | BF3435 | conserved hypothetical protein | chromosome | CDS | 4051813 | 2970 | - | 0.451515 |
NA | BF1651 | putative solute-binding protein precursor | chromosome | CDS | 1925239 | 825 | - | 0.486061 |
NA | BF1931 | putative two-component system response regulator | chromosome | CDS | 2251993 | 699 | - | 0.470672 |
NA | BF0165 | putative two-component regulatory system, sensor kinase protein | chromosome | CDS | 176546 | 1353 | - | 0.331116 |
NA | BF0168 | putative two-component response regulator transcriptional regulatory protein | chromosome | CDS | 180086 | 687 | + | 0.464338 |
NA | BF2450 | putative two component system response regulator | chromosome | CDS | 2840304 | 1365 | - | 0.488645 |
NA | BF4326 | putative two-component system sensor kinase/response regulator fusion protein | chromosome | CDS | 5142098 | 2754 | - | 0.438998 |
NA | BF4313 | putative two-component system sensor, no kinase domain | chromosome | CDS | 5118209 | 1026 | - | 0.407407 |
NA | BF2206 | putative two-component system, sensor kinase | chromosome | CDS | 2574607 | 1314 | - | 0.417808 |
NA | BF0031 | hypothetical transmembrane protein | chromosome | CDS | 41125 | 1236 | + | 0.338997 |
NA | BF3005 | putative membrane protein | chromosome | CDS | 3494393 | 1107 | + | 0.312556 |
NA | BF0821 | conserved hypothetical transmembrane protein | chromosome | CDS | 1013875 | 1563 | + | 0.435061 |
NA | BF3076 | putative membrane protein | chromosome | CDS | 3579023 | 900 | - | 0.432222 |
NA | BF2255 | putative sensor histidine kinase | chromosome | CDS | 2635266 | 2010 | - | 0.376119 |
NA | BF0242 | putative two-component system sensor kinase | chromosome | CDS | 266842 | 1095 | + | 0.432877 |
NA | BF0684 | putative anti-sigma factor | chromosome | CDS | 836618 | 999 | - | 0.447447 |
NA | BF1281 | putative two-component sensor histidine kinase | chromosome | CDS | 1534709 | 2379 | + | 0.379571 |
NA | BF0998 | putative sigma-54 dependent transcriptional regulator | chromosome | CDS | 1250304 | 1227 | + | 0.475143 |
NA | BF0040 | hypothetical transmembrane protein | chromosome | CDS | 46514 | 1140 | + | 0.353509 |
NA | BF3301 | putative two-component system sensor kinase/response regulator fusion protein | chromosome | CDS | 3886836 | 4059 | - | 0.381621 |
NA | BF0954 | putative FNR-family transcriptional regulator protein | chromosome | CDS | 1192309 | 702 | - | 0.423077 |
NA | BF2047 | putative two-component system sensor kinase/response regulator fusion protein | chromosome | CDS | 2393187 | 2700 | - | 0.506667 |
NA | BF0313 | putative cAMP-binding DNA-binding protein | chromosome | CDS | 364839 | 564 | - | 0.437943 |
NA | BF3725 | putative membrane protein | chromosome | CDS | 4395649 | 933 | - | 0.410504 |
NA | BF1605 | putative two-component system sensor histidine kinase protein | chromosome | CDS | 1866619 | 1251 | - | 0.507594 |
NA | BF4171 | conserved hypothetical protein | chromosome | CDS | 4917622 | 2844 | - | 0.501758 |
NA | BF2344 | conserved putative DNA-binding hypothetical protein | chromosome | CDS | 2738201 | 582 | + | 0.371134 |
NA | BF2840 | putative two-component system, histidine kinase | chromosome | CDS | 3300204 | 2838 | - | 0.433404 |
NA | BF0336 | putative two-component sensor histidine kinase | chromosome | CDS | 403256 | 2439 | - | 0.420254 |
NA | BF2629 | conserved hypothetical protein | chromosome | CDS | 3059863 | 1080 | - | 0.469444 |
NA | BF1589 | putative two-component histidine kinase sensor protein | chromosome | CDS | 1847598 | 1833 | - | 0.482815 |
NA | BF0916 | putative FNR-like protein | chromosome | CDS | 1146588 | 684 | - | 0.407895 |
NA | BF3767 | conserved hypothetical membrane protein | chromosome | CDS | 4449072 | 1734 | + | 0.461361 |
NA | BF2943 | conserved hypothetical protein | chromosome | CDS | 3420035 | 678 | - | 0.342183 |
NA | BF2682 | putative response regulator | chromosome | CDS | 3124428 | 366 | + | 0.371585 |
NA | BF3364 | putative two-component system, sensor kinase | chromosome | CDS | 3968664 | 789 | - | 0.496831 |
NA | BF3208 | putative two-component system, sensor kinase | chromosome | CDS | 3771774 | 1632 | - | 0.471201 |
NA | BF4076 | hypothetical protein; conserved hypothetical protein | chromosome | CDS | 4798677 | 1029 | - | 0.434402 |
NA | BF1929 | putative UmuD/RumA DNA repair protein | chromosome | CDS | 2249949 | 438 | - | 0.429224 |
NA | BF1963 | possible anti-sigma factor | chromosome | CDS | 2294215 | 849 | - | 0.467609 |
NA | BF0870 | putative anti-sigma factor | chromosome | CDS | 1086324 | 987 | + | 0.39615 |
NA | BF2532 | putative two-component system sensor histidine kinase | chromosome | CDS | 2946829 | 2439 | - | 0.479295 |
NA | BF3925 | putative two-component system sensor histidine kinase/response regulator fusion protein | chromosome | CDS | 4629717 | 2301 | - | 0.478053 |
NA | BF0584 | conserved hypothetical protein | chromosome | CDS | 700225 | 765 | + | 0.445752 |
NA | BF3509 | putative response regulator | chromosome | CDS | 4132776 | 399 | - | 0.41604 |
NA | BF0101 | putative two-component response regulator | chromosome | CDS | 106878 | 756 | + | 0.399471 |
NA | BF4312 | putative two-component response regulator | chromosome | CDS | 5117443 | 774 | - | 0.445736 |
NA | BF0030 | putative AraC family/two component family regulatory protein | chromosome | CDS | 38442 | 1740 | - | 0.386207 |
NA | BF2844 | putative regulatory protein | chromosome | CDS | 3305403 | 1170 | - | 0.446154 |
NA | BF2368 | putative regulatory protein | chromosome | CDS | 2765441 | 381 | + | 0.440945 |
NA | BF1275 | putative cNMP and DNA binding protein, possible regulator | chromosome | CDS | 1529541 | 570 | - | 0.350877 |
NA | BF2281 | putative two component system sensor histidine kinase | chromosome | CDS | 2670430 | 4491 | + | 0.409708 |
NA | BF1590 | putative two-component response regulator | chromosome | CDS | 1849519 | 690 | - | 0.476812 |
NA | BF3750 | putative membrane protein | chromosome | CDS | 4426841 | 2193 | - | 0.422709 |
NA | BF0967 | putative two-component sensor histidine kinase | chromosome | CDS | 1208696 | 1902 | + | 0.462671 |
NA | BF2174 | putative AraC-family transcriptional regulator | chromosome | CDS | 2530794 | 873 | + | 0.408935 |
NA | BF0169 | putative two-component regulator sensor kinase | chromosome | CDS | 180769 | 1368 | + | 0.453216 |
NA | BF2207 | putative two-component system, response regulator | chromosome | CDS | 2575917 | 1341 | - | 0.435496 |
NA | BF1220 | conserved hypothetical protein | chromosome | CDS | 1484335 | 543 | + | 0.430939 |
NA | BF2551 | putative lipoprotein | chromosome | CDS | 2975461 | 417 | + | 0.465228 |
NA | BF2836 | putative membrane protein | chromosome | CDS | 3293642 | 894 | - | 0.39821 |
NA | BF3054 | putative two-component system sensor histidine kinase | chromosome | CDS | 3552606 | 1956 | + | 0.467791 |
NA | BF0205 | putative transmembrane protein | chromosome | CDS | 223192 | 1056 | + | 0.357955 |
NA | BF2205 | putative regulatory protein | chromosome | CDS | 2573826 | 666 | - | 0.438438 |
NA | BF2921 | putative arsenate reductase | chromosome | CDS | 3390041 | 474 | + | 0.474684 |
NA | BF4179 | putative two-component system sensor kinase/response regulator fusion protein | chromosome | CDS | 4935903 | 4029 | + | 0.397865 |
NA | BF3582 | putative regulatory protein (possible anti-sigma factor) | chromosome | CDS | 4225765 | 1221 | - | 0.396396 |
NA | BF3573 | putative anti sigma factor | chromosome | CDS | 4210518 | 1026 | - | 0.401559 |
NA | BF4048 | putative two-component system sensor histidine kinase/response regulator fusion protein | chromosome | CDS | 4755430 | 3924 | - | 0.364934 |
NA | BF2729 | putative membrane protein | chromosome | CDS | 3177185 | 1989 | - | 0.487179 |
NA | BF0034 | hypothetical protein | chromosome | CDS | 43795 | 162 | + | 0.320988 |
NA | BF0692 | putative RelA/SpoT GTP pyrophosphokinase | chromosome | CDS | 847547 | 2244 | - | 0.456774 |
NA | BF2754 | putative two component system histidine kinase | chromosome | CDS | 3211194 | 1299 | + | 0.472671 |
NA | BF3641 | putative transmembrane sensor/regulatory protein | chromosome | CDS | 4297084 | 879 | + | 0.467577 |
NA | BF0569 | putative anti-sigma factor | chromosome | CDS | 676445 | 999 | + | 0.446446 |
frrD | BF0533 | putative two-component sensor histidine kinase | chromosome | CDS | 626418 | 1440 | + | 0.417361 |
frrF | BF0535 | putative anti-sigma factor | chromosome | CDS | 628631 | 1011 | + | 0.386746 |
kdpD | BF0532 | putative osmosensitive potassium transport sensor protein | chromosome | CDS | 625262 | 1128 | + | 0.446809 |
relA | BF2223 | GTP pyrophosphokinase | chromosome | CDS | 2596375 | 2214 | - | 0.439928 |
rprX | BF3635 | two-component regulatory system, sensor kinase protein | chromosome | CDS | 4289852 | 1560 | - | 0.426923 |
rprY | BF3634 | two-component system, transcriptional regulatory protein | chromosome | CDS | 4289149 | 711 | - | 0.417722 |
rteA | BF1529 | putative two component system sensor kinase | chromosome | CDS | 1789931 | 1272 | + | 0.446541 |
rteB | BF1530 | putative two-component system response regulator | chromosome | CDS | 1791195 | 1323 | + | 0.562358 |
typA | BF4258 | putative GTP-binding elongation factor family protein TypA/BipA | chromosome | CDS | 5052358 | 1800 | - | 0.449444 |