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2024-05-19 09:08:40

Gene list

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COG category: Signal transduction mechanisms
Genomic element: chromosome I

Number of genes found: 148

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio fischeri ES114, ES114
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA VF1878 pili chemotaxis protein methyltransferase CheR homolog PilKchromosome I CDS2117517 828 - 0.397343
NA VF0596 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)chromosome I CDS654741 1563 - 0.360845
NA VF1789 methyl-accepting chemotaxis proteinchromosome I CDS2023461 2094 + 0.372493
NA VF1036 autoinducer regulatory protein AinRchromosome I CDS1143189 2460 - 0.322358
NA VF0114 transcriptional regulatory protein OmpRchromosome I CDS132135 720 + 0.430556
NA VF0087 sensory transduction protein kinasechromosome I CDS99439 2496 + 0.385016
NA VF0094 sensory box/GGDEF family proteinchromosome I CDS108730 2559 - 0.38687
NA VF0937 repressor protein LuxOchromosome I CDS1033942 1431 + 0.387142
NA VF1048 hypothetical proteinchromosome I CDS1158432 519 + 0.283237
NA VF1308 transcriptional regulatory protein, Fnrchromosome I CDS1460768 159 + 0.345912
NA VF0099 GTP-binding protein TypA/BipAchromosome I CDS116715 1833 + 0.435897
NA VF1270 cyclohexadienyl dehydratase precursorchromosome I CDS1413020 765 - 0.394771
NA VF2344 sensor protein CpxAchromosome I CDS2639631 1389 + 0.395248
NA VF0525 sensor protein PhoQchromosome I CDS560470 1344 - 0.354911
NA VF2261 sensory box/GGDEF family proteinchromosome I CDS2543430 1896 - 0.334916
NA VF1778 methyl-accepting chemotaxis proteinchromosome I CDS2010944 1620 + 0.334568
NA VF0832 hypothetical proteinchromosome I CDS914646 3408 + 0.353286
NA VF1856 FlrA; sigma-54-dependent transcriptional activatorchromosome I CDS2092514 1482 - 0.408907
NA VF1092 toxin corregulated pilus biosynthesis protein Ichromosome I CDS1207990 2007 - 0.341305
NA VF1879 chemotaxis protein CheVchromosome I CDS2118428 921 - 0.388708
NA VF0998 transcriptional regulatorchromosome I CDS1103138 1569 - 0.365201
NA VF0285 bis(5'-nucleosyl)-tetraphosphatase, symmetricalchromosome I CDS289945 816 - 0.409314
NA VF1091 methyl-accepting chemotaxis proteinchromosome I CDS1206090 1575 - 0.371429
NA VF2480 sensory box/GGDEF family proteinchromosome I CDS2786544 1218 - 0.392447
NA VF0987 methyl-accepting chemotaxis proteinchromosome I CDS1087244 1953 + 0.365079
NA VF1310 universal stress protein familychromosome I CDS1461671 951 + 0.382755
NA VF2235 glutamate-ammonia-ligase adenylyltransferasechromosome I CDS2514952 2856 - 0.39986
NA VF2362 GGDEF family proteinchromosome I CDS2657038 996 + 0.354418
NA VF1491 hypothetical proteinchromosome I CDS1653597 780 + 0.376923
NA VF1619 sensor protein TorSchromosome I CDS1817970 2919 - 0.36999
NA VF0164 Protein tyrosine phosphatasechromosome I CDS182323 441 + 0.437642
NA VF0938 hypothetical proteinchromosome I CDS1035362 357 + 0.37535
NA VF2236 methyl-accepting chemotaxis proteinchromosome I CDS2518013 1602 - 0.398876
NA VF0524 sensor protein PhoQchromosome I CDS559501 963 - 0.322949
NA VF1369 methyl-accepting chemotaxis proteinchromosome I CDS1517745 2034 - 0.414946
NA VF0457 phosphoenolpyruvate-protein phosphotransferasechromosome I CDS487902 2262 + 0.3855
NA VF1256 3',5'-cyclic-nucleotide phosphodiesterasechromosome I CDS1400773 993 + 0.363545
NA VF1830 protein-glutamate methylesterasechromosome I CDS2066288 1131 - 0.430592
NA VF1050 Protein YciNchromosome I CDS1160337 246 - 0.353659
NA VF1133 methyl-accepting chemotaxis proteinchromosome I CDS1257914 2010 - 0.405473
NA VF1396 transcriptional regulatorchromosome I CDS1546627 657 + 0.391172
NA VF2381 cyclic nucleotide binding protein/2 CBS domainschromosome I CDS2677355 1833 + 0.38407
NA VF0115 osmolarity sensor protein EnvZchromosome I CDS133287 1305 + 0.419157
NA VF1309 transcriptional regulatorchromosome I CDS1461125 396 + 0.366162
NA VF1367 two-component response regulatorchromosome I CDS1514108 2094 - 0.325215
NA VF0997 phospho-specific protein-protein interaction motif FHAchromosome I CDS1101693 1311 - 0.379863
NA VF0758 PhoH-like proteinchromosome I CDS826736 1185 - 0.4
NA VF0104 GTP pyrophosphokinasechromosome I CDS122874 2124 - 0.431262
NA VF1808 phosphohistidine phosphatase SixAchromosome I CDS2043464 471 - 0.40552
NA VF2280 catabolite gene activator Vfrchromosome I CDS2569355 633 + 0.417062
NA VF1200 hypothetical proteinchromosome I CDS1335471 2076 - 0.345376
NA VF1855 FlrB; two-component sensor kinasechromosome I CDS2091294 1062 - 0.415254
NA VF2082 sensor protein BarAchromosome I CDS2324274 2796 + 0.397353
NA VF1627 response regulator, GacAchromosome I CDS1831011 645 - 0.4
NA VF1400 C4-dicarboxylate transport sensor protein DctBchromosome I CDS1551373 2043 - 0.375428
NA VF1245 hypothetical proteinchromosome I CDS1387889 1551 - 0.35332
NA VF0318 transcription regulator, Crp familychromosome I CDS326874 570 - 0.338596
NA VF1269 DNA polymerase V subunitchromosome I CDS1412520 408 - 0.409314
NA VF2155 carbohydrate diacid regulatorchromosome I CDS2417470 1146 + 0.351658
NA VF0777 methyl-accepting chemotaxis proteinchromosome I CDS847938 1875 - 0.4016
NA VF1397 sensor protein PhoQchromosome I CDS1547302 1365 + 0.375824
NA VF2409 minor curlin subunit CsgBchromosome I CDS2701682 570 + 0.307018
NA VF0096 nitrogen regulation protein NtrBchromosome I CDS112847 1059 - 0.408876
NA VF1117 toxin corregulated pilus biosynthesis protein Ichromosome I CDS1234278 1815 + 0.306336
NA VF2359 protein tyrosine phosphatasechromosome I CDS2654940 498 - 0.421687
NA VF0698 methyl-accepting chemotaxis proteinchromosome I CDS765965 1989 - 0.357466
NA VF0991 protein phosphatase 2Cchromosome I CDS1093458 672 - 0.383929
NA VF2491 hypothetical proteinchromosome I CDS2799958 1308 + 0.376911
NA VF2161 methyl-accepting chemotaxis proteinchromosome I CDS2432735 1497 + 0.372077
NA VF2080 GTP pyrophosphokinasechromosome I CDS2320490 2238 - 0.411528
NA VF1147 carbon starvation protein Achromosome I CDS1274870 1467 - 0.40968
NA VF0545 autoinducer-2 production protein LuxSchromosome I CDS594358 519 + 0.38921
NA VF0494 sensory transduction protein kinasechromosome I CDS531996 2028 - 0.37574
NA VF1532 general L-amino acid-binding proteinchromosome I CDS1716700 1029 + 0.40622
NA VF1138 TcpI, toxin-coregulated pilus biosynthesis genechromosome I CDS1263202 1863 - 0.366076
NA VF2437 Acetyl-coenzyme A synthetasechromosome I CDS2745138 375 - 0.370667
NA VF0008 cystine-binding proteinchromosome I CDS6352 753 - 0.38911
NA VF0895 hypothetical proteinchromosome I CDS985135 924 - 0.376623
NA VF2122 aerobic respiration control sensor protein ArcBchromosome I CDS2363364 2367 - 0.371356
NA VF1278 GAF domain-containing proteinschromosome I CDS1424302 453 + 0.366446
NA VF0708 sensor protein LuxQchromosome I CDS775296 2235 + 0.300671
NA VF2241 arylsulfatasechromosome I CDS2524426 612 + 0.398693
NA VF1618 methyl-accepting chemotaxis proteinchromosome I CDS1816196 1641 - 0.377818
NA VF2355 universal stress protein Achromosome I CDS2650158 426 - 0.366197
NA VF0827 methyl-accepting chemotaxis proteinchromosome I CDS908876 1656 + 0.358092
NA VF1401 C4-dicarboxylate transport transcriptional regulatory protein DctDchromosome I CDS1553412 1428 - 0.391457
NA VF1296 sensor protein LuxQchromosome I CDS1449566 2079 - 0.334776
NA VF1652 hypothetical proteinchromosome I CDS1864815 1887 + 0.331214
NA VF2019 hypothetical proteinchromosome I CDS2257314 456 - 0.385965
NA VF2092 sigma-E factor negative regulatory proteinchromosome I CDS2335111 618 - 0.414239
NA VF1504 methyl-accepting chemotaxis proteinchromosome I CDS1667771 1962 + 0.362385
NA VF0538 carbon storage regulatorchromosome I CDS582940 198 + 0.419192
NA VF1908 nitrate/nitrite sensor protein NarQchromosome I CDS2145474 1692 + 0.357565
NA VF1515 hypothetical proteinchromosome I CDS1692896 1380 - 0.352899
NA VF2374 two-component response regulatorchromosome I CDS2668244 630 + 0.398413
NA VF2042 methyl-accepting chemotaxis proteinchromosome I CDS2276876 1629 + 0.374463
NA VF0526 transcriptional regulatorchromosome I CDS561816 681 - 0.35536
NA VF2496 serine/threonine protein kinasechromosome I CDS2806142 1326 + 0.382353
NA VF0083 universal stress protein Achromosome I CDS96520 426 - 0.387324
NA VF1909 nitrate/nitrite response regulator protein NarPchromosome I CDS2147186 612 + 0.385621
NA VF1771 sensor protein kinasechromosome I CDS2000568 759 + 0.40448
NA VF1350 hypothetical proteinchromosome I CDS1496336 2046 + 0.337732
NA VF1123 hypothetical proteinchromosome I CDS1243120 2544 + 0.407233
NA VF1826 chemotaxis protein CheWchromosome I CDS2063930 495 - 0.410101
NA VF2513 cyclic nucleotide binding protein/2 CBS domainschromosome I CDS2824377 1881 + 0.393939
NA VF1279 ProP effectorchromosome I CDS1424860 627 + 0.419458
NA VF1987 phosphate regulon sensor protein PhoRchromosome I CDS2226309 1296 - 0.392747
NA VF1054 hypothetical proteinchromosome I CDS1166586 474 + 0.375527
NA VF2011 hypothetical proteinchromosome I CDS2250498 450 - 0.393333
NA VF1149 hypothetical proteinchromosome I CDS1277206 1683 - 0.374926
NA VF2037 transcriptional regulator, Cro/CI familychromosome I CDS2272019 648 + 0.419753
NA VF1988 phosphate regulon transcriptional regulatory protein PhoBchromosome I CDS2227631 693 - 0.417027
NA VF1093 glutamate-gated potassium channelchromosome I CDS1210387 1101 + 0.356948
NA VF1570 TorCAD operon transcriptional regulatory protein TorRchromosome I CDS1761965 699 - 0.384835
NA VF0136 3-deoxy-D-manno-octulosonic acid kinasechromosome I CDS153863 705 + 0.404255
NA VF1833 chemotaxis protein CheYchromosome I CDS2070399 369 - 0.376694
NA VF0989 sensory box/GGDEF family proteinchromosome I CDS1090606 1896 + 0.334916
NA VF1053 sensory transduction protein kinasechromosome I CDS1165259 1341 + 0.415362
NA VF0355 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)chromosome I CDS386432 1980 + 0.369697
NA VF0385 nitrogen regulatory IIA proteinchromosome I CDS420588 444 - 0.394144
NA VF1639 hypothetical proteinchromosome I CDS1844614 1473 - 0.32926
NA VF2165 DnaK suppressor proteinchromosome I CDS2440837 450 + 0.413333
NA VF1603 sensory box/GGDEF family proteinchromosome I CDS1801506 1203 + 0.356608
NA VF2138 two-component sensor histidine kinasechromosome I CDS2392866 3381 + 0.37415
NA VF1832 chemotaxis protein CheZchromosome I CDS2069651 717 - 0.398884
NA VF0872 methyl-accepting chemotaxis proteinchromosome I CDS956791 1089 - 0.393939
NA VF1561 sensory box/GGDEF family proteinchromosome I CDS1749206 1332 - 0.358859
NA VF1587 lysine-arginine-ornithine-binding proteinchromosome I CDS1780531 777 - 0.375804
NA VF2342 periplasmic protein CpxPchromosome I CDS2638247 285 - 0.396491
NA VF2442 LexA repressorchromosome I CDS2750335 627 - 0.424242
NA VF0095 nitrogen regulation protein NR(I)chromosome I CDS111405 1404 - 0.410256
NA VF1831 chemotaxis protein CheAchromosome I CDS2067434 2208 - 0.410326
NA VF0985 sensory box/GGDEF family proteinchromosome I CDS1080986 2484 + 0.319646
NA VF1783 nitric oxide reductase regulator NorRchromosome I CDS2016595 1539 + 0.384016
NA VF0990 serine/threonine protein kinasechromosome I CDS1092502 960 - 0.341667
NA VF0091 sensory box/GGDEF family proteinchromosome I CDS104342 2538 - 0.377069
NA VF1503 methyl-accepting chemotaxis proteinchromosome I CDS1666069 1404 + 0.383191
NA VF2343 transcriptional regulatory protein CpxRchromosome I CDS2638944 684 + 0.383041
NA VF0272 universal stress protein familychromosome I CDS278123 438 - 0.385845
NA VF2090 putative sigma-E factor regulatory proteinchromosome I CDS2333642 486 - 0.386831
NA VF2091 sigma-E factor regulatory protein RseB precursorchromosome I CDS2334133 927 - 0.37109
NA VF1772 hypothetical proteinchromosome I CDS2001412 1410 + 0.385816
NA VF2120 aerobic respiration control protein ArcAchromosome I CDS2362113 720 + 0.423611
NA VF1689 Hnr proteinchromosome I CDS1904169 1107 - 0.369467
NA VF0454 transcriptional regulatorchromosome I CDS484695 1338 + 0.382661
NA VF1854 FlrC; two-component response regulatorchromosome I CDS2089857 1434 - 0.426081
NA VF0724 BolA proteinchromosome I CDS791461 315 + 0.380952
NA VF1148 two-component response regulatorchromosome I CDS1276497 717 - 0.362622