Gene list
Applied filters:
COG category: Signal transduction mechanisms
Genomic element: chromosome II
Number of genes found: 93
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Vibrio cholerae O1 biovar eltor str. N16961, N16961 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
VCA0008 | methyl-accepting chemotaxis protein | chromosome II | CDS | 6624 | 1662 | - | 0.483755 | |
VCA0031 | methyl-accepting chemotaxis protein | chromosome II | CDS | 37648 | 1566 | - | 0.4553 | |
VCA0034 | conserved hypothetical protein | chromosome II | CDS | 42214 | 873 | - | 0.468499 | |
VCA0049 | GGDEF family protein | chromosome II | CDS | 56584 | 882 | - | 0.470522 | |
VCA0052 | hypothetical protein | chromosome II | CDS | 59786 | 1563 | - | 0.498401 | |
VCA0068 | methyl-accepting chemotaxis protein | chromosome II | CDS | 77459 | 1644 | - | 0.484793 | |
VCA0074 | GGDEF family protein | chromosome II | CDS | 82992 | 1101 | - | 0.451408 | |
VCA0080 | GGDEF family protein | chromosome II | CDS | 90558 | 1824 | - | 0.426535 | |
VCA0101 | conserved hypothetical protein | chromosome II | CDS | 108299 | 1557 | - | 0.445087 | |
VCA0112 | hypothetical protein | chromosome II | CDS | 122069 | 1488 | + | 0.49664 | |
VCA0117 | sigma-54 dependent transcriptional regulator | chromosome II | CDS | 128790 | 1593 | + | 0.510986 | |
VCA0135 | cyclic nucleotide binding protein, putative | chromosome II | CDS | 149379 | 681 | + | 0.500734 | |
VCA0141 | C4-dicarboxylate transport sensor protein, putative | chromosome II | CDS | 155195 | 2055 | - | 0.509489 | |
VCA0142 | C4-dicarboxylate transport transcriptional regulatory protein | chromosome II | CDS | 157539 | 1353 | + | 0.542498 | |
VCA0159 | conserved hypothetical protein | chromosome II | CDS | 176056 | 942 | - | 0.464968 | |
VCA0165 | GGDEF family protein | chromosome II | CDS | 181879 | 2133 | + | 0.464135 | |
VCA0176 | methyl-accepting chemotaxis protein | chromosome II | CDS | 192834 | 1935 | + | 0.486305 | |
VCA0182 | sigma-54 dependent transcriptional regulator | chromosome II | CDS | 200338 | 1593 | - | 0.52103 | |
VCA0189 | response regulator | chromosome II | CDS | 205609 | 1005 | + | 0.468657 | |
VCA0190 | hypothetical protein | chromosome II | CDS | 206613 | 447 | + | 0.436242 | |
VCA0210 | response regulator, putative | chromosome II | CDS | 225591 | 1569 | + | 0.463352 | |
VCA0211 | sensory box sensor histidine kinase | chromosome II | CDS | 227217 | 1947 | - | 0.465331 | |
VCA0217 | GGDEF family protein | chromosome II | CDS | 234164 | 1080 | - | 0.452778 | |
VCA0220 | hemolysin secretion protein HylB | chromosome II | CDS | 240114 | 1647 | + | 0.485732 | |
VCA0238 | sensor histidine kinase | chromosome II | CDS | 258742 | 1650 | + | 0.482424 | |
VCA0239 | transcriptional regulator | chromosome II | CDS | 260372 | 675 | + | 0.484444 | |
VCA0245 | PTS system, IIA component | chromosome II | CDS | 264715 | 507 | - | 0.5286 | |
VCA0256 | transcriptional regulator | chromosome II | CDS | 276337 | 672 | - | 0.513393 | |
VCA0257 | sensor histidine kinase | chromosome II | CDS | 276984 | 1455 | - | 0.535395 | |
VCA0268 | methyl-accepting chemotaxis protein | chromosome II | CDS | 285034 | 1932 | + | 0.47412 | |
VCA0366 | hypothetical protein | chromosome II | CDS | 353709 | 936 | + | 0.375 | |
VCA0451 | hypothetical protein | chromosome II | CDS | 403167 | 501 | + | 0.331337 | |
VCA0522 | sensor histidine kinase/response regulator LuxN | chromosome II | CDS | 454734 | 2061 | + | 0.437166 | |
VCA0531 | sensor histidine kinase | chromosome II | CDS | 468993 | 1494 | + | 0.490629 | |
VCA0532 | DNA-binding response regulator | chromosome II | CDS | 470476 | 693 | + | 0.471861 | |
VCA0536 | conserved hypothetical protein | chromosome II | CDS | 473172 | 867 | - | 0.467128 | |
VCA0557 | GGDEF family protein | chromosome II | CDS | 493351 | 1410 | + | 0.436879 | |
VCA0560 | GGDEF family protein | chromosome II | CDS | 497678 | 1239 | - | 0.447942 | |
VCA0565 | sensor histidine kinase | chromosome II | CDS | 503254 | 1500 | + | 0.447333 | |
VCA0566 | transcriptional regulator | chromosome II | CDS | 504647 | 738 | + | 0.451219 | |
VCA0583 | hypothetical protein | chromosome II | CDS | 521497 | 786 | + | 0.475827 | |
VCA0658 | methyl-accepting chemotaxis protein | chromosome II | CDS | 594586 | 1611 | - | 0.50031 | |
VCA0663 | methyl-accepting chemotaxis protein | chromosome II | CDS | 598557 | 1764 | + | 0.461451 | |
VCA0675 | nitrate/nitrite sensor protein NarQ | chromosome II | CDS | 609797 | 1752 | - | 0.476027 | |
VCA0681 | conserved hypothetical protein | chromosome II | CDS | 616344 | 1296 | - | 0.477623 | |
VCA0682 | transcriptional regulator UhpA | chromosome II | CDS | 617798 | 627 | + | 0.470494 | |
VCA0683 | sensor protein UhpB | chromosome II | CDS | 618427 | 1584 | + | 0.488005 | |
VCA0697 | sensory box/GGDEF family protein | chromosome II | CDS | 635108 | 1929 | + | 0.452566 | |
VCA0704 | phosphoglycerate transport system transcriptional regulatory protein PgtA | chromosome II | CDS | 644568 | 1320 | - | 0.497727 | |
VCA0705 | phosphoglycerate transport regulatory protein PgtB, putative | chromosome II | CDS | 645805 | 2370 | - | 0.487764 | |
VCA0709 | sensor protein TorS | chromosome II | CDS | 652820 | 3063 | - | 0.508652 | |
VCA0719 | sensor histide kinase | chromosome II | CDS | 664193 | 948 | - | 0.486287 | |
VCA0736 | sensor histidine kinase LuxQ | chromosome II | CDS | 680472 | 2574 | - | 0.471639 | |
VCA0759 | arginine ABC transporter, periplasmic arginine-binding protein | chromosome II | CDS | 702954 | 732 | - | 0.483607 | |
VCA0773 | methyl-accepting chemotaxis protein | chromosome II | CDS | 715286 | 1422 | + | 0.506329 | |
VCA0785 | GGDEF family protein | chromosome II | CDS | 728957 | 1884 | + | 0.491507 | |
VCA0848 | GGDEF family protein | chromosome II | CDS | 789918 | 981 | - | 0.449541 | |
VCA0850 | response regulator | chromosome II | CDS | 801121 | 786 | - | 0.465649 | |
VCA0851 | conserved hypothetical protein | chromosome II | CDS | 802066 | 1080 | - | 0.466667 | |
VCA0864 | methyl-accepting chemotaxis protein | chromosome II | CDS | 815881 | 1398 | + | 0.440629 | |
VCA0895 | chemotactic transducer-related protein | chromosome II | CDS | 846932 | 2946 | + | 0.478955 | |
VCA0905 | conserved hypothetical protein | chromosome II | CDS | 859667 | 1140 | - | 0.472807 | |
VCA0906 | methyl-accepting chemotaxis protein | chromosome II | CDS | 860947 | 1737 | - | 0.464594 | |
VCA0923 | methyl-accepting chemotaxis protein | chromosome II | CDS | 874442 | 1959 | + | 0.475242 | |
VCA0931 | conserved hypothetical protein | chromosome II | CDS | 884337 | 1383 | - | 0.477946 | |
VCA0939 | sensory box/GGDEF family protein | chromosome II | CDS | 890253 | 966 | + | 0.454451 | |
VCA0954 | chemotaxis protein CheV, putative | chromosome II | CDS | 903131 | 921 | + | 0.465798 | |
VCA0956 | GGDEF family protein | chromosome II | CDS | 904820 | 1020 | + | 0.455882 | |
VCA0960 | GGDEF family protein | chromosome II | CDS | 908482 | 1374 | - | 0.454876 | |
VCA0965 | GGDEF family protein | chromosome II | CDS | 914406 | 1191 | + | 0.426532 | |
VCA0974 | methyl-accepting chemotaxis protein | chromosome II | CDS | 919898 | 1686 | - | 0.488138 | |
VCA0978 | amino acid ABC transporter, periplasmic amino acid-binding protein, putative | chromosome II | CDS | 926671 | 732 | - | 0.443989 | |
VCA0979 | methyl-accepting chemotaxis protein | chromosome II | CDS | 927422 | 885 | - | 0.474576 | |
VCA0981 | hypothetical protein | chromosome II | CDS | 929101 | 744 | - | 0.458333 | |
VCA0988 | methyl-accepting chemotaxis protein | chromosome II | CDS | 940679 | 1557 | + | 0.480411 | |
VCA1034 | methyl-accepting chemotaxis protein | chromosome II | CDS | 984002 | 2001 | - | 0.501249 | |
VCA1039 | amino acid ABC transporter, periplasmic amino acid-binding protein | chromosome II | CDS | 989435 | 837 | + | 0.501792 | |
VCA1056 | methyl-accepting chemotaxis protein | chromosome II | CDS | 1005434 | 2313 | - | 0.479032 | |
VCA1069 | methyl-accepting chemotaxis protein | chromosome II | CDS | 1018626 | 1920 | - | 0.510417 | |
VCA1082 | hypothetical protein | chromosome II | CDS | 1035375 | 1164 | + | 0.467354 | |
VCA1083 | conserved hypothetical protein | chromosome II | CDS | 1036577 | 708 | + | 0.466102 | |
VCA1086 | response regulator | chromosome II | CDS | 1041477 | 1707 | - | 0.458699 | |
VCA1087 | anti-sigma F factor antagonist, putative | chromosome II | CDS | 1043207 | 300 | - | 0.42 | |
VCA1088 | methyl-accepting chemotaxis protein | chromosome II | CDS | 1043516 | 1155 | - | 0.45368 | |
VCA1090 | chemotaxis protein CheD, putative | chromosome II | CDS | 1045749 | 702 | - | 0.452991 | |
VCA1091 | chemotaxis protein methyltransferase CheR | chromosome II | CDS | 1046389 | 831 | - | 0.441637 | |
VCA1092 | methyl-accepting chemotaxis protein | chromosome II | CDS | 1047234 | 2037 | - | 0.487972 | |
VCA1093 | purine-binding chemotaxis protein CheW | chromosome II | CDS | 1049284 | 462 | - | 0.495671 | |
VCA1094 | purine-binding chemotaxis protein CheW | chromosome II | CDS | 1049742 | 528 | - | 0.486742 | |
VCA1095 | chemotaxis protein CheA | chromosome II | CDS | 1050278 | 2163 | - | 0.490522 | |
VCA1096 | chemotaxis protein CheY | chromosome II | CDS | 1052489 | 378 | - | 0.455026 | |
VCA1097 | conserved hypothetical protein | chromosome II | CDS | 1052859 | 306 | - | 0.470588 | |
VCA1105 | DNA-binding response regulator | chromosome II | CDS | 1061510 | 657 | - | 0.488584 |