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# Haemophilus ducreyi 35000HP, 35000HP

>HD2035 amino acid ABC transporter, periplasmic amino acid-binding protein
MLKKIAFATLTAISLFTSMNSLASNDLLSRIDAKGTISVATEGTYPPFTY
HDQTGKLTGYDVEVTRAIAEKLGVKVDFKETQWDAMLAGLKAGRFDLVAN
QVALSTPERQAMFDLSDAYSWSGAALVVRADNRHVKQPADVQGIKVAQSL
SSNYGELAVKNGAKVISVDGMAQALLLIQQQRVEATFNNYLALLDYFNKN
PTSSLKIIWQDSEQLGAGLVVNKGNQAALAKINQAIMALHQDGTFKRLGE
QFFGKDISVK
>HD0909 hypothetical protein
MSIKEHLEYLNFYIKNLSVSLVADIEQFSNEQVKVDISLGFAEPKIIEEE
NNLIAVFPYRLEFSSSDQVSIDSEFVIGFAIKSDSIRSLEDLKSLVNENK
DEFVKYITRTVNQLIDNGLEHTNIRFEEQFAIEPLNYL
>HD0117 conserved hypothetical protein
MSDALDQATEQSERLLELQLAPHLETALSDDEIEQIALSGRDCCECGLPI
PIQRLRAYPLAVRCICCQQDHEDNQR
>HD0357 probable carbon starvation protein A
MLWFFFCVAMLLVGYFIYGKVVERIFTINPQKMTPAHAMSDGVDYMPMSK
TKIWLIQLLNIAGTGPIFGPILGALYGPVAMLWIVLGCIFAGAVHDYFSG
MLSVRNGGATMPVLAGKYLGRPVKVFINIMALLLLLLVGVVFVASPAQLM
ATITMDVLGGTSGALQLNDAETVHQSLQTTGLTVWGMDKATIISVWTLII
FCYYILATLLPVDKIIGRIYPLFGALLLFMSIGMVYGLVSAHFSAQDPID
FFRTINADGQGLTWEKFTQNFQVKGDVPIWPLLFLTISCGALSGFHATQS
PLMARCANNESDGRFIFYGAMITEGLIALVWCTVGLSFYENPQMLQDAIS
AGSPSKVVYDSSLHFLGFIGGIFAVLGVVVLPITSGDTAFRAARLQLAEI
FKIEQRSLTKRLMIAIPLFTLGFIVSKIDFSVLWRYFTWANQTTAMIMLW
TAAAYLYRYKKFHWVCSIPAWFITTVCSTYLFYNKIGFGLDYQLSVYLGF
ATTIICIVMFFKLLKPLSDNDETTPVEN
>HD0142 hypothetical protein
MQVGIISHLEGQQQLKKVYADTVTEIEKQIPALEKLAQMPGAQGEQARAM
LDNMKIKVEELKNAGNDLENAFKEGLTQGIQTSIMGLAQGTMTLKDAIKI
WR
>HD1063 conserved hypothetical protein
MASIRSLTRELPYQPIRMYRDLNTERSIKLDLNSLCIKRPTETFFIQVKN
PHLIAWGIELDDLLIVEQPYSYLINDLLVIEKNNEYKFYQFFNEIENKTG
QKEKILFSLDVSEPNLHIQDWQSIKIAGVITNVVHQIRHRTAPKSNRKYI
A
>HD1369 conserved hypothetical protein
MLKRTLLACLALSCSFPSYSADYITENLSTYMRKGAGDQYKIAGTIQAGE
KITVLDRKDRFVLIRDSRNREGWVLNNEISQTASPKELIPELQQQIQDLS
SKLNKIDNDWQQRTAEMQRRSQQAEQQSSELLDENTQLKRKLEVLKNKNR
DLETMQDAEKREIVIQWFIYGGSVLTVGLLLGLLIPFILPRRRRNNGWS
>HD1859 PTS system Enzyme II-A permease component
MLKESLIENNSILLNQHVADWRAAIKLGTDLLEKAGAIEARYYTNIVSKI
EEMGPYIILAPGLAMPHARPEEGVIKTSFALVTLAEPVYFDGEDEPVSVL
ITLAGSDSDQHMEGLMEVTQILDDAESDSGVNLDKVLACKTAEEIYAMID
ASLGA
>HD0276 conserved hypothetical protein
MILFAGDPHGNYQHLATFLQQCGKAKEELALIILGDLQLSSTEALDRLAE
YCEIWFIHGNHDSKQ
>HD0581 HlpB, lipoprotein HlpB
MKKLTTISAIALLAFSVTACNKPDPATDYKKFEEWYQLQEKTQATAQAEF
QQQLAEIMAKDPKDPEAVDALLQSFSAKVQETLASLEKVDVNSDEIKALK
EKTKTVLALSSEVLTEQLKVLATPNDEAQKVVQTKAEQLKEKAIELQKLQ
ENLKAKFASK
>HD1263 apaH, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
MATYIMGDLHGCFTEFQQLLDKISYNPNYDELWLTGDIVARGEHSLACLR
FIKDPKNNIKTVLGNHDLHLLATLVGIKKVKPTDKLEALFSAPDRLELQH
WLRKQPLMVQHPTHNFLLVHAGISPEWDLSTTLSCAREAEMILQSDNYAD
YLAEMYDNTPDQWQDNLTGIARWRYILNAFTRMRFCYADKRLDFSCKLPI
EKAPVTLKPWLELDNPLYDTHDILFGHWASLMGKTSRSNIYALDTGCVWG
NHLTIINWETKQIFRQERLK
>HD0278 arcA, aerobic respiration control protein ArcA
MQNPQILIVEDELVTRNTLKSIFEAEGYEVFEASDGTEMNTILAQQTINL
VIMDINLPGKNGLMLARELRENTKMALMFLTGRDNEVDKILGLEVGADDY
ITKPFNPRELTIRARNLLHRTMLEKDKVSHSEQQESYRFNGWTLDVNSRS
LITPEGEINKLPRSEFRALLHFCENPGKIQTREDLLLKMTGRELKPHDRT
VDVTIRRIRKHFEDHLNTPEIIVTIHGEGYRFCGQIE
>HD0812 artI, arginine ABC transporter, periplasmic-binding protein
MKKLLLASVLSVSTLSLTAKELTFAMEPTYPPFEVTNQQGEIVGFDVDIA
NAICHEIQATCHFKGQAFDALIQAVKQKRIDAAISAIDITDARMKQVAFT
HTYYDSSASFIAIKGKTDLTKAKNIGVQNGTTFQQYVMAEAKQYVAKSYN
SLQDAVLDLKNGRIDMIFGDSAVLADMLSKDQDLNFVGDKVTNEKYFGNG
VAIAVNKANMALVDELNQGLATIKANGTYQKIYDKWMTK
>HD1791 bolA, putative transcriptional regulator, BolA
MLIEQIIRAKLDAAFSPVVLKIENESYMHSSGKGAESHFKVILVSDLFIA
QRVVARHQAVYNCLSDELANGVHALALHTYTSAEWTERQGIVAASPNCVG
VGQ
>HD1470 cpxA, sensor kinase CpxA
MPKFLKKIKSVRNYLAYQLFAYFGLTFAIMLAITLAIPNFDARSFSRLEK
GEHEFFIQESRQTELQYNLDEIFERRLSVATQNGFNIILFDPKTRIFVGA
GADSNRIQSFQVFLYRAQTPLEPLQRRFGSLEISGPFLVKSNKREYMQYF
AQIVDPQEEFFNRIFDSPWLMLMIVLIVSVPILLWLSWKIARPVKELRIC
ANAVATGNLAINPKLETEGIHEFREVGRSFNQMITSLQELTEYQQRLLSD
ISHELKTPLARLQLATALIRRRNGDSAELTRIDNQIMKLDTMVHDLLSLS
RQQINQHLMREVFSINKIWDDILEDAKFEAEQNQIDLFIEQRIDNVEGYF
INGNEIILASALENLIRNAQKYAKQSITVLIYIDDKELVMSVDDDGEGVP
ESEYKQIFRPFYRVGEARDRQSGGTGLGLAIVANAAQQHKGRVEAMKSIL
GGLRVETRLPLWLE
>HD1469 cpxR, transcriptional regulatory protein CpxR
MPRILLVDDDLELTELLAELLSLEGFHIHCVHNGQDALTELELQSYDLIL
LDVMMPILNGIETLKQLRQKYAIPVLMLSARDDEIDRVLGLELGADDYLP
KPFNDRELVARIKAILRRTVAPNLSDVVTPSNHSPEDSNKQLSFGGVELH
PGRQQAIFEDQDLDLTGTEFALLQMLMHNPGQILSRELLSLEVLGKRLTP
YDRAIDMHISNLRKKLPERNDNLPWFKTLRGRGYLLVTEK
>HD0738 crp, cyclic AMP receptor protein
MQMQDISISTPRLDGEVSPPPSIHDPAVEWFLTHCHIHRYPSKYTLIHAG
EEANSLFYIVSGSVAVFIKDDEGKEMILSHLGQGEFVGEISLFEENTQPR
TAWVKTKDACEIAEISYKKFKQLVHVNPDILMYLAAQMACRLRQTSRQVS
NLAFLDVTGRIAQTLMNLAKMPEAMTHPEGMQIKITRQEIGQMVGCSRET
VGRILKMLEDEGLISAHGKTIVVYGTR
>HD1430 csrA, carbon storage regulator CrsA
MLVLTRKVGESLLIGDDIEITVLSVRGNQVKLGVNAPKNIVVHREEIYHQ
IKALADNIPESV
>HD0603 dksA, dosage-dependent DnaK suppressor protein
MVQVATTTSLGLLALAGVTPYQPKKDEEYMNDAQKEHFRKILRAWHVQIM
EEAERTKNQMQEEVANFADPADRATQEEEFNLELRNRDRERKLLKKIEQT
LNSISEDDYGYCQTCGVEIGLRRLEARPTADMCIDCKTLAEIREKQMGL
>HD1709 glnE, glutamate ammonia ligase adenylyltransferase
MFSQLDFTGLPLANTGENRPLAIAVAMSNFVKKTLQKQADLRDDWQRKLP
TLADCGNYAERLTIYLSTINDEVQLSHCLRNFRHREMARLSFIQSNKLAT
VEFVFEQLSDLAEAIILAARDWLFTRCCAEYGTPVNGLGEIQPLLIIGMG
KLGGRELNFSSDIDLIFTYPEAGQTVGGHKTIENSKFFTRLGQRLIKALD
EITVDGFVYRTDMRLRPFGDNGALVLSFAAMEDYYQEQGRDWERYAMIKA
KILGEDLTDVNHRYLQQMLRPFVYRRYLDFSAIQSLREMKQKISREVLRR
NLQDNIKLGAGGIREIEFIVQTFQMIRGGRDKILQQRSLLQVLPHLVTLN
LLTKQQAKHLGDAYIFHRQLENVLQAIDDQQTQSLPADAKNQARIMYACQ
SYWQKDQQNQPLMIEYHWQSWQQFLSTLAQHQQHVRVIFNQLIGEEEQAN
QSPVNEQLAIWQDILHPEIRQLELAEVLRDYPVATEDYATIFHLLANTLQ
DWSKRPIGVRGRKVLSQLMPKVMHSICSKTDYLVVLPRLLNIIDRVTTRT
TYLELLQEKDQILPLLERLCGHSIMVAEQIARYPMLLDEFIINKSLMKVI
EFEQYKTELTEYLIRIPEEDEEALIDALRQFKQGHLLRIAVADILGVLPV
MKISDHLTYLAAAIISEVVNMAWKSLVKRFGKPTHLAEDERGFAVIAYGK
LGGLELGYNSDLDLVFLHNAPLEGETSGRRSISNHQFYLKLAQKINSIFN
LNTSAGVLYEVDMRLRPSGDAGLLVSTFQAYQYYQQHEAWTWETQALVRG
RCVYGSASLIDEFSRIRRTTLCLARTRGRLRQEISQMRHKMYQHLTKTST
GQFNLKTDQGGITDIEFIAQSIVLEYAHCYPEMAKWSDNVRIFTAAIECG
ILSQHIGEGLKNAYTRIRNRIHQLNLLQLPSIVNDTEFVSERAFVTKIWQ
QIFTDNE
>HD1427 hlyX, fnr-like transcriptional regulator protein
MKIISDAKNVGRTACTIHCQNCSISQLCLPFTLNEHELTQLDNIIERKKP
VQKSQIIFQSGDELRSIYAIRSGTIKSYTISESGEEQITAFHLPGNLVGF
DAITNMRHLGFAQALETSMICEIPFDILDDLAGKMPKIRHQIMRLMSNEI
KSDQEMILLLSKMNAEEKLAAFLHNLSQRYAERGFSAREFRLTMTRGDIG
NYLGLTIETISRLLGRFQKSGMITVQGKYITINHMDKLTDMAGVTRSQIS
VTQSA
>HD1101 kdkA, 3-deoxy-D-mannooctulosonic acid kinase
MPMIHYIFNREIVPPAIEPLLKQLFSGQNFTQSDRLLGYSKGRGITWFLN
TQAELGINIVLRHYYRGGLFGKVVKDRYLFQRIDQTRAVQEFNLLTQMQR
WHLPVPRPIAVEINKQSIFYRAKIMLEKIEHTQDLSKLLQTQPLVAEQYQ
QLGQLIRQLHDHQIHHSDLNIHNILLDDNGKFWLIDFDKCCIKAGEEWKQ
ANLNRLLRSFHKEQTRLGIQFHQQNWQSLLTGYQQHNQGDNR
>HD0545 lexA, probable LexA repressor
MSRKHLTARQQEIFDFLKHHIDTTGMPPTRVEIAREIGFKSPNAAEEHLK
ALARKGYIEMLSGTSRGIRILINNDNEDVTQDLSLPLIGKVAAGTPIMAI
EHVESHYPVNGAMFNPNADYLLKVNGNSMEKIGILDGDLLAVHKTNFARN
GQVVVARVEDEVTVKRLEKKGELIYLHPENDELQPIIVDPRLKYIEIEGI
AVGVIRNNAWM
>HD0370 luxS, autoinducer-2 production protein
MPLLDSFKVDHTRMNAPAVRVAKTITTPKGDLITVFDLRFCRPNMEIMSS
KGIHTLEHLYAGFMRDHLNSDKVEIIDISPMGCRTGFYMSLIGEPSAQAV
ANAWKNAMHDILTKVSDVTQIPELNIYQCGTFSEHSLEDAHQIARDVLAK
GISVNLNEDLTLDEEWLNR
>HD0305 narP, nitrate/nitrite response regulator protein
MTESYKILLIDDHPLMRQGIRQILELEDNFTIVGEASNGNDGIALALDTD
PDLIILDLNMKGISGLDTLRALRKQGVDSRIIVLTASDEQSDIFASMDAG
VDGYLLKDSDTSELRENIRKAVLGETVLSDSIRAHLLNRRPENDPLSVLT
DRERDVLQWIATGMSNKQIAGQLFISEETVKVHIRNLLRKLNVHSRVAAT
ILYLEQQRLKQVK
>HD1009 proQ, possible ProP effector
MSVQPETMPDSSNKTNPTVKEVIAYLADKFPLCFSIEGEAKPLKVGLSQD
LAEALADDEKVSKTLLRQVLRSYTMSWRYLACCKANAQRIGLQGENVGIV
DEAQAEHAAQSLAVAKEAYAARKAEQRKEQRKDFFKKKAREERNAKTMNK
AVKKGSPKKDTFAKATAESLAVLTHKFSKGNK
>HD0585 ptsN, PTS system, nitrogen regulatory IIA homolog
MMKLTEFLTKENIRQGVIVSSKKRALELIGKIVADSLNNTPDGSTAENIC
AIECFSQLFKREKLGSTSINGGIALPHAKLPASTDSMLTFTTPISVFLQL
ENGIDYEASDNKEVDLIYAIMLPSDCCDKYKDDLPALAEKLSDKSLAKQL
RAATSSEEIWQYLEYADHQIEPNE
>HD1185 relA, GTP pyrophosphokinase
MVAIRRSHELDPSTFELASWSASLQMSPITFEELQIAWRYIHEKLDTDSY
HLMWDGVEMVELLHGLNMDDDSLVAALLFPLVKNNIVDLAQVKEEFSNQV
KNLVKGVIEMDNIRQLNASSRSDFQIDNIRRMLLAMVDDFRCVVIKLAER
IAYLREIHRYTEEDLVLAAKECSHIYAPLANRLGIGQLKWELEDYCFRVL
HPQSYRRIATQLGERRLERENYIANFVSQLTASLTEEVDTLEVYGRPKHI
YSIWKKMQKKNVQFEQLFDIRAVRVIVPNVQDCYSVLGIIHTQYKHLPEH
FDDYIAHPKPNGYQSIHTVVLGEGEQPIEVQIRTRKMHDEAELGIAAHWK
YKEGPTVSRSGYEEKIIWLRKLLAWQNDLAVSSDMMADMRSQIFDDRVYV
FTPRGEVIDLPKNSTPLDFAYAVHSEIGHRCIGAKIADRIVPFTYVLQMG
DQVEIITQKTPNPSRDWLSPQAGFVNTSKARAKIIAWFKKLDREKNIPLG
KEALEAEISRLGLSHKQIEQYALPRYNLKQFDDLYAAIGGGDIRLNQLSH
YLQSKLIKPTAEQEDEAVLKHVNKNAYNAQQQKGKNGQIIIDGVGNLMHN
LARCCQPIPGDDIVGYITQGRGISIHCANCEQLFELRSANPERIVSAQWD
SHFKAGFSLRIRIIANERNGLLRDVSAVMANEKVNVLTVASRQDIKRGLT
VMDIELEMSNVEMLAKILTRISQLESVIEAKRLAN
>HD1173 rseA, possible sigma-E factor negative regulatory protein
MQQRENLSAFIDGCEVDDVFLNELSTDPVLKQKWASYHAISAIMHNDEII
LGRDFSLKMEALLEDEEIETQSVNTSSNVAKPKGMLLKLKGWSTPIIQAG
IAASVCFVAVLGVNMMNSDNDGLQVEQPVLQTLPFSNSIQPVSYNAPEKH
VPTAEQLEKQQRKISDLLENGVLEHRTDLGSLSLTEEEKLDASQTSVISN
QEK
>HD1174 rseC, possible sigma-E factor regulatory protein
MMVETATVVQYQNGKALVRCSVKTACGNCGAKADCGTQLLSSLVKERVPH
FELSVNMPLVAGDMVKIGLPEQTLLWSIFWIYVVPLMVLIGSAVGFTQLF
ANELVVVFMMFICTSMTFFSIKKIIDKKQLSQLNPIFLGRVE
>HD0447 sixA, possible phosphohistidine phosphatase
MNIWIMRHGEASFNATSDSQRSLTPLGQQMAERQGRWLAERLQAQQQILD
KILVSPLLRTQQTLTYINKGMQAVNFSQNLSELVEIWQGITPSGNPDNVK
NYLTFLYETGYKNVLIISYLPLVYDLVLSITCQQSHIHFYPAVIAEIAWQ
SDFGTLVATQKP
>HD1924 spoT, guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolase
MHLFEPLHSIIQTYLPTDKIEWIQRAFVVARDAHEGQTRSSGEPYITHPV
AVATIIAEMKLDHEAIMAALLHDVIEDTPYTEEELAAEFGSNVAKIVQGV
SKLDKLKFRTRQEAQVENFRKMILAMTKDIRVVLIKLADRTHNMRTLGSL
RPDKRRRIAKETLEIYSPIAHRLGIEHLKNELENLCFQAMHPYRYRILRL
AIDMARGTRQDLLSTISHEIQMRLDEMGIKGRVYGREKHLYALYEKMRQR
DQHFHSILDIYAFRIVVNSIDNCYRVLGQMHALYKPRPYQIRDYIAVPKS
NGYQSLHTSMIGHKGMPIEVQIRTEDMDLMAELGVAAHWRYSEDQTQTTS
VQQKAQQWLRSIVELQQSAGNSDEFIENVKSDLFSDDIYVFTPKGRIVEL
PAKATAIDFAYAVHSDIGDCCIGATVDRKPYPISQPLESGQTVEIITKAG
KHPKRAWLNFVVTAKARSKIKAALKQFELIAEKPEETEKVEQLDIELEIK
DQIGVLANITNTIASMNSNIGMIESRPNDKGNYQVKIRISVTDKTHLYVV
IQKLIRVRGVIRVAKVSA
>HD0299 typA, GTP-binding protein, elongation factor typA/bipA homolog
MQHLDINKLRNIAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDS
NDLEKERGITILAKNTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSV
LLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVINKVDRPGARPDWVVDQVF
DLFVNLGATDEQLDFPIIYASALMGVAGLEHEALAEDMTPLFEAIVKHVQ
APSVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTITVIDANGK
TRNGKVGQVLGHLGLQRYEATEAFAGDIIAITGLVELNISDTICDINNVE
MLPALTVDEPTVTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVAL
RVEETPNPDEFRVSGRGELHLSVLIENMRREGYELAVSRPKVIYKEENGK
KQEPFEQVTIDIEEQHQGSVMEALGIRKGEVKDMIPDGKGRTRLEYVIPS
RGLIGFRNEFMTMTSGTGLLYSSFSHYDDVKLGEIGQRKNGVLISNATGK
ALAYALFGLQERGKLMIEHGVDVYEGQIIGIHSRSNDLTVNCLQGKKLTN
MRASGKDDAIVLTTPVKMTLEQALEFIDDDELVEVTPQSVRIRKRLLTEN
DRKRASRTTSSTSTR
>HD1428 uspA, universal stress protein A
MYKHILVAVDLSEESLILLRKGAGLAEKCGAKLSLIHVDVNFSDLYTGLI
DINMSSVQDGVIEETTKALDELALKIDYPVSQRLNGTGDFSQVLEEAVAK
YQIDLLITGHHQDFWSKFMSSTRQVMNNVTVDMLVVPLIDE