Gene list
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COG category: Signal transduction mechanisms
Organism: Pseudoalteromonas haloplanktis TAC125, TAC125
Number of genes found: 219
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| Pseudoalteromonas haloplanktis TAC125, TAC125 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | PSHAb0211 | conserved protein of unknown function | SubName: Full=Putative uncharacterized protein; | chromosome II | CDS | 249597 | 693 | + | 0.428571 |
| NA | PSHAa2647 | conserved protein of unknown function with GGDEF domain | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2800121 | 1107 | + | 0.355014 |
| NA | PSHAa2638 | putative Methyl-accepting chemotaxis protein | SubName: Full=Putative Methyl-accepting chemotaxis protein; | chromosome I | CDS | 2790750 | 2016 | + | 0.402282 |
| NA | PSHAa2925 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 3097691 | 963 | + | 0.382139 |
| NA | PSHAa0953 | putative anti-sigma factor antagonist | RecName: Full=Anti-sigma factor antagonist; | chromosome I | CDS | 984107 | 306 | + | 0.336601 |
| NA | PSHAb0472 | conserved protein of unknown function ; putative GGDEF domain protein | SubName: Full=Putative uncharacterized protein; | chromosome II | CDS | 532583 | 2100 | + | 0.359048 |
| NA | PSHAa1307 | putative isocitrate dehydrogenase kinase/phosphatase | RecName: Full=Isocitrate dehydrogenase kinase/phosphatase 1; Short=IDH kinase/phosphatase 1; Short=IDHK/P 1; EC=2.7.11.5; EC=3.1.3.-; | chromosome I | CDS | 1362130 | 1779 | + | 0.390669 |
| NA | PSHAa1839 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1932787 | 1368 | - | 0.383041 |
| NA | PSHAb0248 | putative orphan protein; putative sensory box protein | SubName: Full=Putative orphan protein; putative sensory box protein; | chromosome II | CDS | 291325 | 2241 | - | 0.386435 |
| NA | PSHAa0642 | putative orphan protein | SubName: Full=Putative orphan protein; | chromosome I | CDS | 662310 | 957 | - | 0.409613 |
| NA | PSHAa0817 | conserved protein of unknown function; putative cheW-like protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 848792 | 717 | + | 0.400279 |
| NA | PSHAa0588 | conserved protein of unknown function ; putative inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 614238 | 1839 | + | 0.412724 |
| NA | PSHAb0167 | putative GGDEF sensory box protein | SubName: Full=Putative GGDEF sensory box protein; | chromosome II | CDS | 208352 | 876 | + | 0.381279 |
| NA | PSHAb0437 | putative GGDEF domain membrane associated protein, putative nucleotide cyclase/phophodiesterase box | SubName: Full=Putative GGDEF domain membrane associated protein, putative nucleotide cyclase/phophodiesterase box; | chromosome II | CDS | 495517 | 2535 | - | 0.345562 |
| NA | PSHAa0699 | putative regulator in two-component regulatory system ; LuxR family | SubName: Full=Putative regulator in two-component regulatory system LuxR family; | chromosome I | CDS | 727431 | 651 | + | 0.384025 |
| NA | PSHAa1556 | putative orphan protein; could be an antifreeze protein | SubName: Full=Putative orphan protein could be an antifreeze protein; | chromosome I | CDS | 1612390 | 7233 | + | 0.459284 |
| NA | PSHAa0376 | conserved protein of unknown function ; putative CpxP (P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated) domai | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 392345 | 486 | + | 0.411523 |
| NA | PSHAa0628 | conserved protein of unknown function ; putative two-component system response regulator | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 649357 | 690 | - | 0.434783 |
| NA | PSHAb0368 | putative GGDEF domain membrane protein | SubName: Full=Putative GGDEF domain membrane protein; | chromosome II | CDS | 429581 | 921 | + | 0.356135 |
| NA | PSHAa0620 | putative sensory histidine kinase in regulatory system | SubName: Full=Putative sensory histidine kinase in regulatory system; | chromosome I | CDS | 641374 | 1458 | + | 0.39369 |
| NA | PSHAa1106 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome I | CDS | 1151569 | 1944 | - | 0.359053 |
| NA | PSHAa1088 | conserved protein of unknown function ; putative TPR motives | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1125074 | 1641 | - | 0.372334 |
| NA | PSHAa0436 | conserved protein of unknown function ; putative GGDEF domain | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 452694 | 921 | - | 0.418024 |
| NA | PSHAa2203 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2338915 | 774 | + | 0.339793 |
| NA | PSHAb0077 | putative protein with GGDEF domain | SubName: Full=Putative uncharacterized protein; | chromosome II | CDS | 89124 | 525 | + | 0.382857 |
| NA | PSHAa1214 | conserved protein of unknown function, nucleotide triphosphate hydrolase domain | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1260856 | 1923 | - | 0.399896 |
| NA | PSHAa2354 | putative orphan protein | SubName: Full=Putative orphan protein; | chromosome I | CDS | 2498117 | 468 | + | 0.352564 |
| NA | PSHAa0622 | putative response regulator in two-component regulatory system | SubName: Full=Putative response regulator in two-component regulatory system; | chromosome I | CDS | 643378 | 1350 | + | 0.423704 |
| NA | PSHAa2319 | putative lipopolysaccharide kinase family | RecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; | chromosome I | CDS | 2459352 | 720 | + | 0.408333 |
| NA | PSHAb0289 | putative two-component hybrid sensor and regulator | SubName: Full=Putative two-component hybrid sensor and regulator; | chromosome II | CDS | 335549 | 4758 | + | 0.383775 |
| NA | PSHAa1380 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1444819 | 1236 | - | 0.351133 |
| NA | PSHAa0627 | putative sensor histidine kinase | SubName: Full=Putative sensor histidine kinase; | chromosome I | CDS | 647222 | 2136 | - | 0.425562 |
| NA | PSHAa1825 | putative transmembrane sensor | SubName: Full=Putative transmembrane sensor; | chromosome I | CDS | 1917302 | 1077 | - | 0.392758 |
| NA | PSHAa1821 | putative isocitrate dehydrogenase kinase/phosphatase | RecName: Full=Isocitrate dehydrogenase kinase/phosphatase 2; Short=IDH kinase/phosphatase 2; Short=IDHK/P 2; EC=2.7.11.5; EC=3.1.3.-; | chromosome I | CDS | 1910848 | 1716 | + | 0.406177 |
| NA | PSHAb0184 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome II | CDS | 223059 | 2121 | + | 0.406884 |
| NA | PSHAa2380 | putative response regulator with Chemotaxis-specific methylesterase domain | SubName: Full=Putative response regulator with Chemotaxis-specific methylesterase domain; EC=3.1.1.61; | chromosome I | CDS | 2528608 | 369 | - | 0.368564 |
| NA | PSHAb0434 | conserved protein of unknown function | SubName: Full=Putative uncharacterized protein; | chromosome II | CDS | 492056 | 1215 | + | 0.362963 |
| NA | PSHAa2265 | conserved protein of unknown function ; putative metal-dependent phosphohydrolase domain | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2408479 | 1194 | + | 0.38861 |
| NA | PSHAa2701 | protein with EAL domain | SubName: Full=Protein with EAL domain; | chromosome I | CDS | 2857881 | 1359 | - | 0.342899 |
| NA | PSHAa0395 | putative aerotaxis sensory transducer | SubName: Full=Putative aerotaxis sensory transducer; | chromosome I | CDS | 412176 | 1542 | + | 0.385214 |
| NA | PSHAa0644 | putative two-component response regulator with GGDEF domain | SubName: Full=Putative two-component response regulator with GGDEF domain; | chromosome I | CDS | 666556 | 924 | + | 0.361472 |
| NA | PSHAa2387 | putative chemotaxis sensory protein | SubName: Full=Putative chemotaxis sensory protein; | chromosome I | CDS | 2536827 | 1638 | + | 0.403541 |
| NA | PSHAa1036 | putative orphan protein ; putative membrane protein | SubName: Full=Putative orphan protein putative membrane protein; | chromosome I | CDS | 1073382 | 789 | + | 0.385298 |
| NA | PSHAa2262 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2403230 | 606 | + | 0.386139 |
| NA | PSHAb0361 | putative two-component regulatory system sensor protein | SubName: Full=Putative two-component regulatory system sensor protein; | chromosome II | CDS | 419797 | 1731 | + | 0.378394 |
| NA | PSHAa2941 | putative transcriptional regulator sensing dicarboxylates | SubName: Full=Putative transcriptional regulator sensing dicarboxylates; | chromosome I | CDS | 3117154 | 360 | - | 0.436111 |
| NA | PSHAa2736 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2901909 | 1674 | - | 0.396057 |
| NA | PSHAa0527 | putative low molecular weight phosphotyrosine protein phosphatase | SubName: Full=Putative low molecular weight phosphotyrosine protein phosphatase; EC=3.1.3.48; | chromosome I | CDS | 542990 | 462 | + | 0.400433 |
| NA | PSHAa0789 | putative sensory box sensor histidine kinase in two-component regulatory system | SubName: Full=Putative sensory box sensor histidine kinase in two-component regulatory system; | chromosome I | CDS | 820639 | 1179 | + | 0.434266 |
| NA | PSHAa0971 | conserved protein of unknown function; putative membrane protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1003598 | 2256 | - | 0.390514 |
| NA | PSHAa1795 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1885158 | 2007 | + | 0.344793 |
| NA | PSHAa0101 | putative sensor protein; similar to LuxQ in Vibrio harveyi, similar to ArcB sensor in E. coli | SubName: Full=Putative sensor protein similar to LuxQ in Vibrio harveyi, similar to ArcB sensor in E. coli; | chromosome I | CDS | 103222 | 2691 | + | 0.380528 |
| NA | PSHAa2367 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome I | CDS | 2513033 | 3087 | - | 0.397797 |
| NA | PSHAa0131 | putative response regulator in two-component regulatory system | SubName: Full=Putative response regulator in two-component regulatory system; | chromosome I | CDS | 140704 | 720 | - | 0.409722 |
| NA | PSHAa2622 | PhoH-like protein | SubName: Full=PhoH-like protein; | chromosome I | CDS | 2773829 | 1398 | - | 0.401288 |
| NA | PSHAa1304 | putative orphan protein | SubName: Full=Putative orphan protein; | chromosome I | CDS | 1359838 | 447 | - | 0.409396 |
| NA | PSHAa1501 | putative response regulator receiver in two-component signal transduction system | SubName: Full=Putative response regulator receiver in two-component signal transduction system; | chromosome I | CDS | 1577553 | 384 | - | 0.335938 |
| NA | PSHAa0125 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 134671 | 624 | + | 0.399038 |
| NA | PSHAa2484 | putative Bacterial chemotaxis sensory transducer | SubName: Full=Putative Bacterial chemotaxis sensory transducer; | chromosome I | CDS | 2636047 | 1209 | + | 0.378825 |
| NA | PSHAb0121 | putative Methyl-accepting or sensory transducer chemotaxis protein | SubName: Full=Putative Methyl-accepting or sensory transducer chemotaxis protein; | chromosome II | CDS | 147380 | 1623 | - | 0.385089 |
| NA | PSHAa2395 | putative two-component response regulator | SubName: Full=Putative two-component response regulator; | chromosome I | CDS | 2545835 | 462 | - | 0.376623 |
| NA | PSHAa0556 | putative sensory box histidine kinase/response regulator | SubName: Full=Putative sensory box histidine kinase/response regulator; | chromosome I | CDS | 571259 | 2775 | - | 0.357838 |
| NA | PSHAb0191 | conserved protein of unknown function ; putative protein YlaB, COG4943 | SubName: Full=Putative uncharacterized protein; | chromosome II | CDS | 228835 | 1569 | + | 0.339707 |
| NA | PSHAa2918 | putative transcriptional regulator, LuxR family | SubName: Full=Putative transcriptional regulator, LuxR family; | chromosome I | CDS | 3087287 | 657 | + | 0.368341 |
| NA | PSHAb0277 | putative methyl-accepting chemotaxis protein | SubName: Full=Putative methyl-accepting chemotaxis protein; | chromosome II | CDS | 324135 | 1467 | + | 0.390593 |
| NA | PSHAa2615 | putative Sensory box protein | SubName: Full=Putative Sensory box protein; | chromosome I | CDS | 2760814 | 4506 | - | 0.379716 |
| NA | PSHAa0590 | conserved protein of unknown function; putative extracellular solute-binding protein, family 3 | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 617062 | 1050 | + | 0.390476 |
| NA | PSHAb0307 | putative DNA-binding response regulator | SubName: Full=Putative DNA-binding response regulator; | chromosome II | CDS | 359054 | 528 | + | 0.429924 |
| NA | PSHAa1369 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1430474 | 1287 | - | 0.420357 |
| NA | PSHAa0077 | putative sensor protein | SubName: Full=Putative sensor protein; | chromosome I | CDS | 78431 | 3363 | - | 0.377639 |
| NA | PSHAa1211 | conserved protein of unknown function ; putative sensory box/GGDEF family protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1256958 | 972 | + | 0.380658 |
| NA | PSHAb0275 | putative signal transduction histidine kinase two-component system with Protein-glutamate methylesterase domain | SubName: Full=Putative signal transduction histidine kinase two-component system with Protein-glutamate methylesterase domain; | chromosome II | CDS | 320434 | 2784 | + | 0.360273 |
| NA | PSHAa1893 | putative Sigma-54 dependent transcriptional regulator/sensory box protein | SubName: Full=Putative Sigma-54 dependent transcriptional regulator/sensory box protein; | chromosome I | CDS | 1996799 | 1419 | - | 0.40451 |
| NA | PSHAa1299 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1356288 | 852 | - | 0.367371 |
| NA | PSHAa1169 | conserved protein of unknown function ; putative GGDEF family protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1215420 | 2889 | + | 0.415369 |
| NA | PSHAa2620 | putative two-component response regulator | SubName: Full=Putative two-component response regulator; EC=3.1.1.61; | chromosome I | CDS | 2769109 | 900 | - | 0.394444 |
| NA | PSHAa2401 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2550693 | 567 | - | 0.38448 |
| NA | PSHAb0518 | putative Chemotactic transducer | SubName: Full=Putative Chemotactic transducer; | chromosome II | CDS | 584117 | 1890 | + | 0.393651 |
| NA | PSHAb0306 | putative sensor histidine kinase | SubName: Full=Putative sensor histidine kinase; | chromosome II | CDS | 357837 | 1221 | + | 0.423423 |
| NA | PSHAa0913 | putative chemotaxis protein (cheY-like) | SubName: Full=Putative chemotaxis protein (CheY-like); EC=3.1.1.61; | chromosome I | CDS | 942569 | 384 | + | 0.380208 |
| NA | PSHAa2733 | putative methyl-accepting chemotaxis protein | SubName: Full=Putative methyl-accepting chemotaxis protein; | chromosome I | CDS | 2898149 | 1881 | - | 0.391281 |
| NA | PSHAa2011 | conserved protein of unknown function ; putative GGDEF domain protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2122590 | 897 | + | 0.374582 |
| NA | PSHAb0162 | DNA-binding response regulator of two-component system | SubName: Full=DNA-binding response regulator of two-component system; | chromosome II | CDS | 201780 | 672 | - | 0.418155 |
| NA | PSHAa0456 | putative HAMP domain/GGDEF domain/EAL domain protein | SubName: Full=Putative HAMP domain/GGDEF domain/EAL domain protein; | chromosome I | CDS | 475144 | 2316 | + | 0.400691 |
| NA | PSHAa1187 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1234753 | 771 | + | 0.402075 |
| NA | PSHAa0338 | conserved protein of unknown function; putative signaling protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 349919 | 2529 | + | 0.403321 |
| NA | PSHAa1151 | putative two-component member protein | SubName: Full=Putative two-component member protein; | chromosome I | CDS | 1195711 | 3324 | - | 0.382972 |
| NA | PSHAa0954 | putative response regulator | SubName: Full=Putative response regulator; | chromosome I | CDS | 984677 | 1650 | + | 0.38 |
| NA | PSHAa1405 | putative response regulator in two-component regulatory system | SubName: Full=Putative response regulator in two-component regulatory system; EC=3.1.1.61; | chromosome I | CDS | 1473238 | 825 | + | 0.384242 |
| NA | PSHAa1157 | putative response regulator | SubName: Full=Putative response regulator; EC=3.1.1.61; | chromosome I | CDS | 1201716 | 921 | + | 0.368078 |
| NA | PSHAa1485 | putative Serine/threonine protein kinase | SubName: Full=Putative Serine/threonine protein kinase; EC=2.7.11.1; | chromosome I | CDS | 1564094 | 1815 | + | 0.420386 |
| NA | PSHAb0451 | putative transcriptional activator | SubName: Full=Putative transcriptional activator; | chromosome II | CDS | 510848 | 675 | + | 0.41037 |
| NA | PSHAa1145 | Putative two-component response regulator | SubName: Full=Putative two-component response regulator; | chromosome I | CDS | 1191218 | 384 | + | 0.393229 |
| NA | PSHAa1340 | putative calcium binding protein | SubName: Full=Putative calcium binding protein; | chromosome I | CDS | 1388215 | 522 | + | 0.340996 |
| NA | PSHAb0484 | putative GGDEF sensory box protein | SubName: Full=Putative GGDEF sensory box protein; | chromosome II | CDS | 545578 | 2376 | - | 0.366582 |
| NA | PSHAa0162 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 170972 | 459 | - | 0.372549 |
| NA | PSHAa0610 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 636166 | 657 | - | 0.394216 |
| NA | PSHAb0415 | putative unknown membrane associated protein, GGDEF family of nucleotide cyclase/hydrolases | SubName: Full=Putative uncharacterized protein; | chromosome II | CDS | 473595 | 1911 | + | 0.341183 |
| NA | PSHAa0654 | conserved protein of unknown function ; putative sensory transduction histidine kinase | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 677566 | 2682 | - | 0.384415 |
| NA | PSHAa2428 | putative metal-dependent phosphohydrolase, HD region | SubName: Full=Putative metal-dependent phosphohydrolase, HD region; | chromosome I | CDS | 2580119 | 1215 | - | 0.403292 |
| NA | PSHAa2382 | putative signal transduction protein | SubName: Full=Putative signal transduction protein; | chromosome I | CDS | 2530435 | 840 | - | 0.386905 |
| NA | PSHAa2355 | putative nucleoside phosphorylase family | SubName: Full=Putative nucleoside phosphorylase family; | chromosome I | CDS | 2498559 | 1182 | + | 0.331641 |
| NA | PSHAa2463 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome I | CDS | 2613642 | 978 | + | 0.398773 |
| NA | PSHAa0832 | conserved protein of unknown function ; putative EAL domain | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 860782 | 1224 | - | 0.372549 |
| NA | PSHAa1277 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1335433 | 1185 | - | 0.347679 |
| NA | PSHAb0344 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome II | CDS | 400313 | 948 | + | 0.353376 |
| NA | PSHAa0861 | putative transcriptional regulatory protein RstA | SubName: Full=Putative transcriptional regulatory protein RstA; | chromosome I | CDS | 889981 | 705 | - | 0.415603 |
| NA | PSHAa1681 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1760664 | 459 | - | 0.407407 |
| NA | PSHAa2948 | transcriptional regulator, probably associated to the neighboring sensor (putative two-components system); LuxR family | SubName: Full=Transcriptional regulator, probably associated to the neighboring sensor (Putative two-components system) LuxR family; | chromosome I | CDS | 3124997 | 663 | + | 0.423831 |
| NA | PSHAa0664 | putative orphan protein | SubName: Full=Putative orphan protein; | chromosome I | CDS | 691913 | 933 | + | 0.404073 |
| NA | PSHAa2294 | putative orphan protein; putative EAL domain | SubName: Full=Putative orphan protein putative EAL domain; | chromosome I | CDS | 2438617 | 1866 | + | 0.353698 |
| NA | PSHAa1512 | putative orphan protein | SubName: Full=Putative orphan protein; | chromosome I | CDS | 1587450 | 339 | - | 0.380531 |
| NA | PSHAa2384 | conserved protein of unknown function; putative membrane protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2533394 | 534 | - | 0.43633 |
| NA | PSHAa2394 | putative two-component sensor histidine kinase and response regulator hybrid | SubName: Full=Putative two-component sensor histidine kinase and response regulator hybrid; | chromosome I | CDS | 2543853 | 1956 | - | 0.398773 |
| NA | PSHAb0362 | putative response regulator in two-component regulatory system (EBP family) | SubName: Full=Putative response regulator in two-component regulatory system (EBP family); | chromosome II | CDS | 421520 | 1365 | + | 0.428571 |
| NA | PSHAb0252 | putative kinase | SubName: Full=Putative kinase; | chromosome II | CDS | 297210 | 789 | + | 0.447402 |
| NA | PSHAa0787 | putative flagellar regulatory protein A (polar flagellae) | SubName: Full=Putative flagellar regulatory protein A (Polar flagellae); | chromosome I | CDS | 818189 | 1452 | + | 0.434573 |
| NA | PSHAa2919 | putative control sensor/kinase protein (ArcB, TorS, ChiS, LuxQ, BvgS family) | SubName: Full=Putative control sensor/kinase protein (ArcB, TorS, ChiS, LuxQ, BvgS family); EC=2.7.3.-; | chromosome I | CDS | 3088169 | 2157 | + | 0.404729 |
| NA | PSHAa0860 | putative orphan protein ; putative sensory histidine kinase in two-component regulatory system | SubName: Full=Putative orphan protein putative sensory histidine kinase in two-component regulatory system; | chromosome I | CDS | 888676 | 1299 | - | 0.409546 |
| NA | PSHAb0092 | putative protein with acetate and butyrate kinase domain | SubName: Full=Putative uncharacterized protein; | chromosome II | CDS | 109602 | 1698 | + | 0.330389 |
| NA | PSHAa0951 | putative orphan protein; putative conserved domain | SubName: Full=Putative orphan protein putative conserved domain; | chromosome I | CDS | 980623 | 3009 | + | 0.38119 |
| NA | PSHAa0134 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 145329 | 1284 | - | 0.35514 |
| NA | PSHAa1624 | putative sensor protein | SubName: Full=Putative sensor protein; | chromosome I | CDS | 1688958 | 3060 | - | 0.369281 |
| NA | PSHAa2397 | putative orphan protein | SubName: Full=Putative orphan protein; | chromosome I | CDS | 2547808 | 207 | - | 0.415459 |
| NA | PSHAa0374 | putative sensor histidine kinase protein | SubName: Full=Putative sensor histidine kinase protein; | chromosome I | CDS | 390098 | 1392 | - | 0.416667 |
| NA | PSHAa2621 | putative Sensory box sensor histidine kinase/response regulator | SubName: Full=Putative Sensory box sensor histidine kinase/response regulator; EC=2.7.3.-; | chromosome I | CDS | 2769992 | 3771 | - | 0.370989 |
| NA | PSHAb0161 | putative sensory histidine kinase in two-component regulatory system | SubName: Full=Putative sensory histidine kinase in two-component regulatory system; EC=2.7.3.-; | chromosome II | CDS | 200464 | 1317 | - | 0.433561 |
| NA | PSHAa0848 | putative methyl-accepting chemotaxis protein | SubName: Full=Putative methyl-accepting chemotaxis protein; | chromosome I | CDS | 875151 | 1920 | - | 0.400521 |
| NA | PSHAb0169 | putative two domain protein: response regulator receiver domain protein | SubName: Full=Putative two domain protein: response regulator receiver domain protein; | chromosome II | CDS | 210106 | 798 | + | 0.414787 |
| NA | PSHAa2259 | putative two-component response regulator protein with GGDEF domain | SubName: Full=Putative two-component response regulator protein with GGDEF domain; EC=3.1.1.61; | chromosome I | CDS | 2398294 | 1266 | - | 0.373618 |
| NA | PSHAa0317 | putative orphan protein ; putative sensory-box domain | SubName: Full=Putative orphan protein putative sensory-box domain; | chromosome I | CDS | 330808 | 2532 | - | 0.388231 |
| NA | PSHAa2518 | conserved protein of unknown function ; putative sensory box protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2669403 | 3024 | + | 0.375331 |
| NA | PSHAa1182 | putative orphan protein ; putative GGDEF protein | SubName: Full=Putative orphan protein putative GGDEF protein; | chromosome I | CDS | 1228961 | 2370 | - | 0.381435 |
| NA | PSHAa0018 | putative secreted calmodulin-like protein | SubName: Full=Putative secreted calmodulin-like protein; | chromosome I | CDS | 22062 | 213 | + | 0.413146 |
| NA | PSHAa1434 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1508609 | 1896 | + | 0.41403 |
| NA | PSHAa0042 | conserved protein of unknown function; similar to E. coli YjfJ; could be a phage protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 45093 | 693 | + | 0.414141 |
| NA | PSHAa0618 | conserved protein of unknown function ; putative calcium dependent protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 640830 | 234 | - | 0.384615 |
| NA | PSHAa2194 | conserved protein of unknown function ; putative calcium-binding EF-hand domain | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 2330771 | 279 | - | 0.397849 |
| NA | PSHAa2761 | putative GGDEF domain protein | SubName: Full=Putative GGDEF domain protein; | chromosome I | CDS | 2933015 | 2571 | + | 0.376896 |
| NA | PSHAa0052 | hypothetical tryptophan-rich sensor protein | SubName: Full=Hypothetical tryptophan-rich sensor protein; | chromosome I | CDS | 52869 | 2718 | - | 0.373436 |
| NA | PSHAa0711 | putative Methyl-accepting chemotaxis protein | SubName: Full=Putative Methyl-accepting chemotaxis protein; | chromosome I | CDS | 745127 | 1668 | + | 0.390288 |
| NA | PSHAa1210 | putative response regulator | SubName: Full=Putative response regulator; | chromosome I | CDS | 1255948 | 1005 | + | 0.40199 |
| NA | PSHAa0340 | putative orphan protein | SubName: Full=Putative orphan protein; | chromosome I | CDS | 353276 | 204 | - | 0.416667 |
| NA | PSHAa0955 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 986382 | 660 | + | 0.409091 |
| NA | PSHAa2934 | conserved protein of unknown function ; putative GGDEF domain protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 3104531 | 1866 | + | 0.386388 |
| NA | PSHAb0470 | conserved protein of unknown function ; putative GGDEF domain protein | SubName: Full=Putative uncharacterized protein; | chromosome II | CDS | 528889 | 1536 | - | 0.35612 |
| NA | PSHAa0936 | putative aerotaxis sensor receptor (Aer-like) | SubName: Full=Putative aerotaxis sensor receptor (Aer-like); | chromosome I | CDS | 965618 | 1548 | - | 0.400517 |
| NA | PSHAa2398 | putative sigma-54 interacting response regulator protein | SubName: Full=Putative sigma-54 interacting response regulator protein; | chromosome I | CDS | 2548030 | 1341 | - | 0.41387 |
| NA | PSHAa1689 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1765128 | 1272 | - | 0.367138 |
| NA | PSHAa2651 | putative Methyl-accepting chemotaxis protein | SubName: Full=Putative Methyl-accepting chemotaxis protein; | chromosome I | CDS | 2805577 | 1926 | - | 0.398235 |
| NA | PSHAb0273 | putative protein with GGDEF motif and GAF domain | SubName: Full=Putative uncharacterized protein; | chromosome II | CDS | 317785 | 1440 | - | 0.344444 |
| NA | PSHAa1322 | conserved protein of unknown function | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1376213 | 345 | + | 0.449275 |
| NA | PSHAa2396 | putative two-component sensor histidine kinase | SubName: Full=Putative two-component sensor histidine kinase; | chromosome I | CDS | 2546297 | 1485 | - | 0.373737 |
| NA | PSHAa1015 | putative secreted calmodulin-like protein | SubName: Full=Putative secreted calmodulin-like protein; | chromosome I | CDS | 1052869 | 213 | + | 0.42723 |
| CheB | PSHAa1150 | Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase) | SubName: Full=Response regulator CheB (Receptor modification enzyme, protein-glutamate methylesterase); EC=3.1.1.61; | chromosome I | CDS | 1194712 | 996 | - | 0.414659 |
| algR | PSHAa0923 | putative alginate biosynthesis regulatory protein | SubName: Full=Putative alginate biosynthesis regulatory protein; | chromosome I | CDS | 952047 | 702 | + | 0.387464 |
| algZ | PSHAa0922 | putative alginate biosynthesis protein | SubName: Full=Putative alginate biosynthesis protein; | chromosome I | CDS | 951016 | 1035 | + | 0.385507 |
| apaH | PSHAa2637 | diadenosine tetraphosphatase (Ap4A hydrolase) | SubName: Full=Diadenosine tetraphosphatase (Ap4A hydrolase); EC=3.6.1.41; | chromosome I | CDS | 2789679 | 819 | + | 0.401709 |
| arcA | PSHAa0551 | aerobic respiration control protein arcA (Dye resistance protein) | SubName: Full=Aerobic respiration control protein arcA (Dye resistance protein); | chromosome I | CDS | 566343 | 717 | - | 0.408647 |
| arcB | PSHAa0550 | aerobic respiration control sensor protein arcB | SubName: Full=Aerobic respiration control sensor protein arcB; EC=2.7.3.-; | chromosome I | CDS | 564020 | 2319 | + | 0.386373 |
| baeR | PSHAa2195 | Transcriptional regulatory protein in two-component regulatory system with baeS | SubName: Full=Transcriptional regulatory protein in two-component regulatory system with baeS; | chromosome I | CDS | 2331259 | 681 | - | 0.381791 |
| baeS | PSHAa2196 | putative sensory transduction histidine kinase in two-component regulatory system with baeR | SubName: Full=Putative sensory transduction histidine kinase in two-component regulatory system with baeR; | chromosome I | CDS | 2331948 | 1452 | - | 0.385675 |
| barA | PSHAa0737 | sensor protein barA | SubName: Full=Sensor protein barA; EC=3.1.1.61; | chromosome I | CDS | 768145 | 2757 | - | 0.398622 |
| bolA | PSHAa2243 | regulator protein | SubName: Full=Regulator protein; | chromosome I | CDS | 2382787 | 306 | - | 0.392157 |
| cheA | PSHAa0812 | chemotaxis protein cheA | SubName: Full=Chemotaxis protein cheA; EC=2.7.3.-; | chromosome I | CDS | 842843 | 2178 | + | 0.411387 |
| cheB | PSHAa0813 | chemotaxis response regulator protein-glutamate methylesterase | RecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; | chromosome I | CDS | 845072 | 1176 | + | 0.435374 |
| cheR | PSHAa0767 | Chemotaxis protein methyltransferase CheR | SubName: Full=Chemotaxis protein methyltransferase CheR; EC=2.1.1.80; | chromosome I | CDS | 799523 | 831 | + | 0.383875 |
| cheV | PSHAa0766 | chemotaxis protein | SubName: Full=Chemotaxis protein; | chromosome I | CDS | 798567 | 936 | + | 0.398504 |
| cheW | PSHAa0818 | purine-binding chemotaxis protein | SubName: Full=Purine-binding chemotaxis protein; | chromosome I | CDS | 849533 | 498 | + | 0.38755 |
| cheY | PSHAa0810 | chemotaxis protein cheY | SubName: Full=Chemotaxis protein cheY; EC=3.1.1.61; | chromosome I | CDS | 841667 | 384 | + | 0.351562 |
| cheZ | PSHAa0811 | chemotaxis protein cheZ | RecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; | chromosome I | CDS | 842066 | 762 | + | 0.405512 |
| cpxR | PSHAa0375 | Transcriptional regulatory protein CpxR | SubName: Full=Transcriptional regulatory protein CpxR; | chromosome I | CDS | 391491 | 690 | - | 0.417391 |
| csgD | PSHAb0193 | putative csg operon transcription regulator (LuxR family) | SubName: Full=Putative csg operon transcription regulator (LuxR family); | chromosome II | CDS | 231256 | 690 | + | 0.355072 |
| csrA | PSHAa0534 | carbon storage regulator | RecName: Full=Carbon storage regulator homolog; | chromosome I | CDS | 550739 | 192 | + | 0.411458 |
| cstA | PSHAb0210 | cold-shock regulated carbon starvation protein A | SubName: Full=Cold-shock regulated carbon starvation protein A; | chromosome II | CDS | 247950 | 1473 | + | 0.392396 |
| cusR | PSHAb0012 | transcriptional activator of copper resistance (two-component regulatory system with CusS) | SubName: Full=Transcriptional activator of copper resistance (Two-component regulatory system with CusS); | chromosome II | CDS | 16187 | 687 | + | 0.429403 |
| cusR | PSHAa2775 | putative response regulator in two-component regulatory system with CusS, regulation of copper resistance | SubName: Full=Putative response regulator in two-component regulatory system with CusS, regulation of copper resistance; | chromosome I | CDS | 2952009 | 675 | + | 0.422222 |
| cusS | PSHAa2776 | putative sensor transduction kinase (copper resistance) | SubName: Full=Putative sensor transduction kinase (Copper resistance); EC=2.7.3.-; | chromosome I | CDS | 2952664 | 1434 | + | 0.372385 |
| cusS | PSHAb0013 | sensory histidine kinase in two-component regulatory system with CusR, regulation of copper resistance, senses copper ions | SubName: Full=Sensory histidine kinase in two-component regulatory system with CusR, regulation of copper resistance, senses copper ions; | chromosome II | CDS | 16896 | 1362 | + | 0.399413 |
| dksAA | PSHAa0606 | RNA polymerase factor controlling rRNA transcription with ppGpp as a modulator; DnaK suppressor protein | RecName: Full=RNA polymerase-binding transcription factor DksA; | chromosome I | CDS | 632446 | 444 | - | 0.387387 |
| dksAB | PSHAa1194 | putative DksA-type zinc finger protein | SubName: Full=Putative DksA-type zinc finger protein; | chromosome I | CDS | 1240867 | 327 | - | 0.382263 |
| dskAC | PSHAa1090 | putative RNA polymerase regulating factor | SubName: Full=Putative RNA polymerase regulating factor; | chromosome I | CDS | 1134427 | 267 | + | 0.498127 |
| envZ | PSHAa2849 | sensory histidine kinase (phosphorylase) in two-component regulatory system with OmpR, regulates ompF and ompC expression, senses osmolarity (OmpR fam | SubName: Full=Sensory histidine kinase (Phosphorylase) in two-component regulatory system with OmpR, regulates ompF and ompC expression, senses osmolarity (OmpR family); EC=2.7.3.-; | chromosome I | CDS | 3022610 | 1302 | - | 0.415515 |
| flaM | PSHAa0790 | putative Sigma-54 dependent response regulator; regulation of polar flagellae expression | SubName: Full=Putative Sigma-54 dependent response regulator regulation of polar flagellae expression; | chromosome I | CDS | 821814 | 1461 | + | 0.441478 |
| fnr | PSHAa1850 | transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family) | SubName: Full=Transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family); | chromosome I | CDS | 1945526 | 738 | + | 0.392954 |
| glnE | PSHAa2595 | adenylyl transferase for glutamine synthetase | RecName: Full=Glutamate-ammonia-ligase adenylyltransferase; EC=2.7.7.42; AltName: Full=Glutamine-synthase adenylyltransferase; AltName: Full=[Glutamate--ammonia-ligase] adenylyltransferase; | chromosome I | CDS | 2739648 | 2796 | - | 0.403076 |
| glnG | PSHAa0163 | response regulator in two-component regulatory system with GlnL, nitrogen regulation (EBP family) | SubName: Full=Response regulator in two-component regulatory system with GlnL, nitrogen regulation (EBP family); EC=3.1.1.61; | chromosome I | CDS | 171461 | 1386 | - | 0.437229 |
| glnL | PSHAa0164 | nitrogen availability sensory kinase (soluble) in two-component regulatory system with GlnG, nitrogen regulation (nitrogen regulator II, NRII) | SubName: Full=Nitrogen availability sensory kinase (Soluble) in two-component regulatory system with GlnG, nitrogen regulation (Nitrogen regulator II, NRII); | chromosome I | CDS | 172862 | 1071 | - | 0.401494 |
| lexA | PSHAa2873 | transcriptional repressor for SOS response | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome I | CDS | 3046615 | 549 | - | 0.408015 |
| norR | PSHAa2883 | transcriptional regulator of anaerobic NO reduction and detoxification (EBP family) | SubName: Full=Transcriptional regulator of anaerobic NO reduction and detoxification (EBP family); | chromosome I | CDS | 3054543 | 1587 | + | 0.436673 |
| ompR | PSHAa2850 | response regulator in two-component regulatory system with EnvZ, regulates ompF and ompC expression (OmpR family) | SubName: Full=Response regulator in two-component regulatory system with EnvZ, regulates ompF and ompC expression (OmpR family); EC=3.1.1.61; | chromosome I | CDS | 3023917 | 720 | - | 0.456944 |
| pctC | PSHAa2742 | putative chemotactic transducer PctC | SubName: Full=Putative chemotactic transducer PctC; | chromosome I | CDS | 2909908 | 2028 | + | 0.414694 |
| phoB | PSHAa0597 | phosphate regulon transcriptional regulatory protein phoB | SubName: Full=Phosphate regulon transcriptional regulatory protein phoB; | chromosome I | CDS | 624071 | 690 | + | 0.444928 |
| phoP | PSHAa1283 | response regulator in two-component regulatory system with PhoQ | SubName: Full=Response regulator in two-component regulatory system with PhoQ; | chromosome I | CDS | 1341831 | 675 | - | 0.41037 |
| phoQ | PSHAa1282 | sensory histidine kinase in two-component regulatory system with PhoP | SubName: Full=Sensory histidine kinase in two-component regulatory system with PhoP; EC=2.7.3.-; | chromosome I | CDS | 1340500 | 1338 | - | 0.40284 |
| phoR | PSHAa0598 | phosphate regulon sensor protein phoR | SubName: Full=Phosphate regulon sensor protein phoR; EC=2.7.3.-; | chromosome I | CDS | 625014 | 1332 | + | 0.410661 |
| proQ | PSHAa1679 | putative post-translational activator of ProP expression | SubName: Full=Putative post-translational activator of ProP expression; | chromosome I | CDS | 1759732 | 639 | - | 0.388106 |
| pspA | PSHAa0500 | putative negative regulatory gene for the psp operon, phage shock protein A | SubName: Full=Putative negative regulatory gene for the psp operon, phage shock protein A; | chromosome I | CDS | 516432 | 681 | + | 0.387665 |
| pspA | PSHAa2049 | negative regulatory gene for the psp opreon, phage shock protein | SubName: Full=Negative regulatory gene for the psp opreon, phage shock protein; | chromosome I | CDS | 2165564 | 579 | - | 0.416235 |
| pspC | PSHAa0501 | putative phage shock protein C | SubName: Full=Putative phage shock protein C; | chromosome I | CDS | 517123 | 207 | + | 0.352657 |
| pspC | PSHAa2047 | transcriptional activator of the psp operon with PspB, phage shock protein | SubName: Full=Transcriptional activator of the psp operon with PspB, phage shock protein; | chromosome I | CDS | 2164847 | 402 | - | 0.402985 |
| pspF | PSHAa2050 | transcriptional activator of phage shock proteins (EBP family) | SubName: Full=Transcriptional activator of phage shock proteins (EBP family); | chromosome I | CDS | 2166409 | 1086 | + | 0.425414 |
| ptsN | PSHAa2553 | PTS family enzyme IIA | SubName: Full=PTS family enzyme IIA; EC=2.7.1.69; | chromosome I | CDS | 2701012 | 411 | + | 0.394161 |
| ptsP | PSHAa0746 | phosphoenolpyruvate-protein phosphotransferase ptsP (Phosphotransferase system, enzyme I) (Enzyme I-Ntr) | SubName: Full=Phosphoenolpyruvate-protein phosphotransferase ptsP (Phosphotransferase system, enzyme I) (Enzyme I-Ntr); EC=2.7.3.9; | chromosome I | CDS | 780545 | 2265 | + | 0.420751 |
| relA | PSHAa0739 | (p)ppGpp synthetase I (GTP pyrophosphokinase) | SubName: Full=(P)ppGpp synthetase I (GTP pyrophosphokinase); EC=2.7.6.5; | chromosome I | CDS | 772338 | 2157 | + | 0.433009 |
| rseA | PSHAa0727 | putative anti sigma E (sigma 24) factor, negative regulator | RecName: Full=Anti-sigma-E factor RseA; AltName: Full=Regulator of SigE; AltName: Full=Sigma-E anti-sigma factor RseA; AltName: Full=Sigma-E factor negative regulatory protein; | chromosome I | CDS | 759597 | 618 | + | 0.441748 |
| rseB | PSHAa0728 | putative anti sigma E (sigma 24) factor, negative regulator | SubName: Full=Putative anti sigma E (Sigma 24) factor, negative regulator; | chromosome I | CDS | 760219 | 954 | + | 0.40566 |
| rseC | PSHAa0729 | putative regulator of sigma E (sigma 24) factor | SubName: Full=Putative regulator of sigma E (Sigma 24) factor; | chromosome I | CDS | 761193 | 450 | + | 0.404444 |
| rstA | PSHAa0853 | response regulator (activator) in two-component regulatory | SubName: Full=Response regulator (Activator) in two-component regulatory; | chromosome I | CDS | 881216 | 693 | + | 0.412698 |
| rstB | PSHAa0854 | sensory histidine kinase in two-component regulatory system with RstA | SubName: Full=Sensory histidine kinase in two-component regulatory system with RstA; | chromosome I | CDS | 881935 | 1242 | + | 0.400161 |
| sixA | PSHAa0973 | phosphohistidine phosphatase | SubName: Full=Phosphohistidine phosphatase; EC=3.1.3.-; | chromosome I | CDS | 1008876 | 429 | + | 0.431235 |
| spoT | PSHAa2793 | bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | SubName: Full=Bifunctional: (P)ppGpp synthetase II guanosine-3,5-bis pyrophosphate 3-pyrophosphohydrolase; EC=2.7.6.5; EC=3.1.7.2; | chromosome I | CDS | 2969547 | 2109 | + | 0.406828 |
| typA | PSHAa0167 | GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A); involved in LPS core synthesis | SubName: Full=GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A) involved in LPS core synthesis; | chromosome I | CDS | 176578 | 1824 | + | 0.422149 |
| uhpA | PSHAa1591 | response regulator (activator) in two-component regulatory system wtih UhpB, regulates uhpT expression (LuxR/UhpA family) | SubName: Full=Response regulator (Activator) in two-component regulatory system wtih UhpB, regulates uhpT expression (LuxR/UhpA family); EC=3.1.1.61; | chromosome I | CDS | 1657013 | 630 | + | 0.385714 |
| uhpB | PSHAa1592 | sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression | SubName: Full=Sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression; | chromosome I | CDS | 1657629 | 1602 | + | 0.364544 |
| umuD | PSHAb0537 | component of DNA polymerase V | SubName: Full=Component of DNA polymerase V; EC=3.4.21.-; | chromosome II | CDS | 602496 | 414 | - | 0.463768 |
| uspE | PSHAa1851 | putative universal stress protein | SubName: Full=Putative universal stress protein; | chromosome I | CDS | 1946416 | 927 | + | 0.412082 |
| uvrY | PSHAa1916 | putative regulator in two-component regulatory system with BarA (LuxR/UhpA familiy) | SubName: Full=Putative regulator in two-component regulatory system with BarA (LuxR/UhpA familiy); EC=3.1.1.61; | chromosome I | CDS | 2025388 | 651 | - | 0.410138 |
| ybeZ | PSHAa1045 | PhoH-like protein | SubName: Full=PhoH-like protein; | chromosome I | CDS | 1082917 | 1059 | - | 0.437205 |
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