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2024-04-29 01:38:10

Gene list

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COG category: Signal transduction mechanisms
Organism: Lactobacillus sakei subsp. sakei 23K, 23K

Number of genes found: 55

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus sakei subsp. sakei 23K, 23K
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LSA1781 Putative transcriptional regulator, Flp/Fnr familychromosome CDS1764749 669 - 0.408072
NA LSA0211 Hypothetical cell surface protein precursorchromosome CDS204683 465 + 0.44086
NA LSA0164 Putative serine/tyrosine protein phosphatasechromosome CDS157869 789 + 0.39417
NA LSA1057 Putative amino acid ABC transporter, substrate binding/permease subunitchromosome CDS1051723 1464 - 0.402322
NA LSA1370 Two-component system, sensor histidine kinasechromosome CDS1338186 1065 - 0.415962
NA LSA1072 Hypothetical lipoprotein precursorchromosome CDS1067438 1047 - 0.397326
NA LSA0548 Two-component system, sensor histidine kinase (C-terminal fragment), authentic frameshiftchromosome CDS567710 720 + 0.429167
NA LSA0862 N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase) (autolysin)chromosome CDS849559 1323 - 0.428571
NA LSA0710 Hypothetical proteinchromosome CDS713569 1038 + 0.418112
NA LSA0275 Putative serine/tyrosine protein phosphatasechromosome CDS269925 798 - 0.4599
NA LSA0691 Putative serine/threonine protein phosphatasechromosome CDS689186 747 + 0.433735
NA LSA0860 Putative amino acid ABC transporter, substrate-binding lipoprotein precursorchromosome CDS847252 804 + 0.41791
NA LSA0627 Hypothetical proteinchromosome CDS630948 327 - 0.412844
NA LSA0501 Two-component system, sensor histidine kinase (possibly involved in phosphate regulation)chromosome CDS520164 1662 + 0.420578
NA LSA1369 Two-component system, response regulatorchromosome CDS1337552 600 - 0.436667
NA LSA1215 Two component system, response regulatorchromosome CDS1197788 741 - 0.422402
NA LSA1707 Hypothetical proteinchromosome CDS1691588 819 - 0.433455
NA LSA1503 Hypothetical proteinchromosome CDS1474756 555 + 0.378378
NA LSA0078 Two-component system, sensor histidine kinasechromosome CDS73161 1899 + 0.416008
NA LSA0500 Two-component system, response regulator (possibly involved in phosphate regulation)chromosome CDS519464 714 + 0.421569
NA LSA1611 Putative DNA-binding protein, PemK familychromosome CDS1598123 357 - 0.439776
NA LSA0278 Two-component system, sensor histidine kinasechromosome CDS273297 1200 + 0.409167
NA LSA0077 Two-component system, response regulatorchromosome CDS72438 714 + 0.389356
NA LSA1500 Two-component system, response regulatorchromosome CDS1472666 732 + 0.355191
NA LSA0277 Two-component system, response regulatorchromosome CDS272611 687 + 0.419214
NA LSA0558 Putative transcriptional regulator,LytR/AlgR familychromosome CDS574516 453 + 0.430464
NA LSA0513 Putative stress-responsive transcriptional regulatorchromosome CDS531605 237 + 0.42616
NA LSA1501 Two-component system, sensor histidine kinasechromosome CDS1473390 1329 + 0.337096
NA LSA1383 Two-component system, sensor histidine kinasechromosome CDS1350697 1506 - 0.415671
NA LSA0036 Putative serine/tyrosine protein phosphatasechromosome CDS34718 789 - 0.448669
NA LSA1214 Two-component system, sensor histidine kinasechromosome CDS1196352 1437 - 0.419624
NA LSA1497 Putative glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding subunit precursorchromosome CDS1469419 1437 - 0.421712
NA LSA0783 Putative transcriptional regulator, Fnr/Crp Familychromosome CDS777460 666 - 0.355856
NA LSA0828 Hypothetical proteinchromosome CDS817297 471 + 0.416136
NA LSA1455 Two-component system, sensor histidine kinasechromosome CDS1428346 1020 + 0.414706
NA LSA1079 GTP-binding protein TypA (stress response GTPase)chromosome CDS1072581 1836 - 0.400871
NA LSA1454 Two-component system, response regulatorchromosome CDS1427662 675 + 0.388148
NA LSA0549 Two-component system, response regulatorchromosome CDS568422 606 + 0.448845
NA LSA0010 Putative nucleotide-binding phosphoesterasechromosome CDS10683 2034 + 0.441003
NA LSA1384 Two-component system, response regulatorchromosome CDS1352199 687 - 0.419214
arcR LSA0375 Arginine deiminase pathway transcriptional regulator, Crp familychromosome CDS379317 702 + 0.388889
hprK LSA0516 Hpr kinasechromosome CDS532625 942 + 0.42569
lexA LSA1275 Transcriptional repressor LexAchromosome CDS1256429 615 + 0.450406
mecA LSA1448 similar to MecA, putative adapter protein for Clp proteasechromosome CDS1421409 690 - 0.349275
phoH LSA0875 Phosphate starvation-inducible protein, PhoHchromosome CDS862069 969 + 0.44066
relA LSA0737 GTP pyrophosphokinasechromosome CDS732689 2232 + 0.423387
sppKC LSA0562 Two-component system, sensor histidine kinase (SppK fragment) (sakacine Pproduction ), degeneratechromosome CDS576893 552 + 0.391304
sppKN LSA0561 Two-component system, sensor histidine kinase, (SppK fragment) (sakacine P production) , degeneratechromosome CDS576747 210 + 0.390476
sppR LSA0563 Two-component system, response regulator SppR (sakacin P production)chromosome CDS577446 747 + 0.374833
usp1 LSA0042 Similar to universal stress protein, UspA familychromosome CDS39487 468 + 0.403846
usp2 LSA0247 Similar to universal stress protein, UspA familychromosome CDS243064 435 + 0.406897
usp3 LSA0642 Similar to universal stress protein, UspA familychromosome CDS642884 438 - 0.442922
usp4 LSA1173 Similar to universal stress protein, UspA familychromosome CDS1158773 435 + 0.406897
usp5 LSA0038 Similar to universal stress protein, UspA familychromosome CDS36678 483 + 0.374741
usp6 LSA0836 Similar to universal stress protein, UspA familychromosome CDS823411 495 - 0.391919