Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Rhodopseudomonas palustris BisB18, BisB18

>RPC_3308 diguanylate cyclase (GGDEF domain)
MSARILVVDDIPANAKLLEARLSAEYFDVLTASNGAQALEICSRAACDIV
LLDVMMPDMDGFEVCRRLKSNPATHFIPVVMVTALDSPSDRVRGLEAGAD
DFLTKPVSDVVLIARVRSLTRVKMMTDELRMRALTSMEIGVQAPEREAVA
ETGKGGRILLVDDRPSSYERLAPVLAAEHAVDVEPNPSEALFHAADGNYD
LLIVSLGLEEFDGLRLCSQARSLERTRHVPILAIADADNNARLLRGLEIG
VNDYLLRPVDKNELLARARTQIRRRRYTDHLRDNVQNSIEMAITDGLTGL
HNRRYMETHLATLAEQAGVRGKPLALMMLDIDFFKAINDSYGHDAGDDVL
REFAVRIRKSIRGIDLACRYGGEEFVVVMPETDLAVAGMVAERLRRAIAG
ELFAIEKGAKRIEVTISIGLSTLEKKGEPIADVLKRADVALYRAKHDGRN
RVVATAA
>RPC_0583 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with AS/PAC sensor
MPTNRPKKKQLQQAAHRRPALLRGAAKPKTKAVPKDRRIAAEIGEVVRKR
AAADAAIAEARKSHERLREAIDILPQGIVFLDAEGRYILWNKKYAEIYNR
TADLFQPGVKMIDTLRVGVARGDYPEALGHEEEWMAERMAKLFQPGERHE
QLISDGRCIQIEERMTADGGIIGLRIDITELKQREASFRLLFDSNPVPMI
VCALADERILGVNDAAVEHYGYSAAEFSTLTIRNLQAFEAERPWTGDQST
DERAARTWKHVKADGSLIDLAVYSRQLLYGGEPAVLLALMDITERKRAEM
RLAFMAQHDGLTGLPNRNSLRKRLDEMLVHTRRGNEKAAVHFLGIDNFKG
VNDSLGHAVGDKLLRGIARRLRSTLREEDVIGRLNSDEFAILQSGVSRPE
DVVLLAKRLLHAIGEPFLLDGNSVVIGASIGIAMAPGDGDDSEKLLMSAD
MALARAKTETRGTFSFFEPGMDARAQTRRKIESELRGAIQNDVLRPHYQP
LIGLSNGRITGCEALVRWPHPERGMVSPSEFIPVAEDTGLINALGAQVLK
RACEDAANWPDDVRVAVNLSPLQFRLGNLLSLVMDALKQTGLPPKRLELE
ITETLLLEKSSQVIATLHALRALGVRISMDDFGTGYSSLSYLRSFPFDKI
KIDQSFVRGLCTNRELQAIVRSIISLGMGLGVTITAEGVETESELSWLRA
EGCHEAQGFLFSAARPNSEIIDLLSVQSGADFATPDRASIQVA
>RPC_4410 transcriptional regulator, Crp/Fnr family
MLERAVKDTFDSKAFLAGVGAGKAILEFRKNQTVYVQGDAANAVFYIQKG
RIKLTVLSEQGKEAVVAIMEPGQFFGEGCLNGHSHRMATTVAMEESLVTS
ITKEAMLRTLHDQPKFSELFMAYLLTRNSRIEEDLIDQLFNSSEKRLARL
LLLLANFGKEGNPQPITPHISQETLAEMIGTTRSRVSFFMNKFRKLGLIS
YNGKIEVNSSLLNAVLHDKPHIERE
>RPC_2635 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
MAHWSRNSRQMEAAGGTVAVLKPAAVKPARPRSRMMRQYDLVERVRSYNP
DTDEDLLNRAYVYAMMAHGEQTRASGDPYFSHPLEVAAILTHLKLDDATI
VAALLHDTIEDTEATRTEIDNIFGHEIGALVEGLTKLKRLELVSREAKQA
ENLRKLLLAVSNDVRVLLIKLADRLHNMRTLEFVPPASRQRIAEETLDIY
APLAGRMGMQEMREELEDLSFQSLDPDAFAVVMQRLDSLAERNRNLIGEI
ETQLSANLAKNGLSAEVTGRRKRPFSIWTKMERKSVGFEQLSDIYGFRVV
LKDVEACYRALGVVHTTWPVVPGRFKDYISTPKQNDYKSIHTTVIGPGQQ
RVELQIRTEEMDQIAEIGIAAHSFYKDGVGSPTEMLKRESNAFAWLRHTI
EVLSESANPEEFLEHTKLELFHDQVFCFTPKGKLIALPRAANVIDFAYAV
HTDVGNSAVGCKINGKFAPLSSELQNGDEVEVLTSAAQEAPPSAWESLAV
TGKARAAIRRATRTAVRDQYAGLGRRIVERLFVRAKIDYADDKLKGALPR
LARPSIDEVMASVGRGELRASDVARAMYPDYKEERLGRFAGKRDPADVTK
LKAPGSAARVTSVIPIRGLNSDLPVKFAPNGGAVPGDRIVGIVSPGEGIT
IYPIQSPALKDFEEEPERWLDVKWDVDETTPQRFPARLFVQNVNEPGSLA
QIATVIAEHDGNIDNINMSRRSPDFTELTIDLEVYDLKHLSAIIAQLRAK
AVVAKVERVNG
>RPC_1846 Glutamate-ammonia-ligase adenylyltransferase
MTLSATDADQIELAGRFAAGPRLYAPEDAARRLAGWFGDIDAAQASAITA
IAERFPNAERLLQSIAEASPYLFDLIRADAARLVRLLRCDPDRRLAELIE
SSSHAVAAAASETEAMQALRRMKAEAALLIALCDIGDVWPVMRVTEALTD
LAVASVQCALRFLLRQEAARGRLKPPCADRPEERSGMVVLAMGKMGAGEL
NYSSDIDLIVFFDLAAPTVAPDIEPQPFFVRVTQGLARLLNQRTADGYVF
RVDLRLRPDPASTAVAISTASALDYYEREGRTWERAAMIKARPCAGDAAA
GEALLADIAPFVWRKHLDFAALADVHDMKRQMQTFRGQTAIAVEGHNVKV
GRGGIREIEFFAQTQQLIAGGRHRELRVRPTLAALEILATSNWITYQARD
ELTVAYQFLRRVEHRLQMIADEQTHTLPEDVAAVERFARFLGFDSRAAFA
EQLLFHLNCVQGHYSKLFEAGDPTDATTLPPVDYGAGPDDQRLAEHLVAL
GFKKPAMVAETLRQWMAAEYRVLRVDSTRRAFLEFVPTLIVGLSRAEEPD
NAVIAFDRLLQALHRGGRLVSLLSQNKELVALVALVLGAAPRLGDMVARQ
PQIMDGLIDPRFFGAMPDQRELSMRLQATLADAGSYEEFLDRLRMFGQES
LFLIGTRILSGTVSTQQASIAFADVAEGIVATVHGLVSDQFAMQYGRVKG
QETAILAMGRLGSREMTASSDLDLILIYDFDADEPDSDGARSLHGTQYFA
RFTQRLISAFTTRTNYGVLYDVDMRLRPSGRAGPVASRLDSFADYQQHEA
WTWEHMALTRARVISASPAFRDKIEGIIREVLTRPRDAAVIANDVAEMRR
AIAQEKGEDDIWDLKYASGGLVDIDFIAQYLQLVHAAQHPDILNVGTLQV
LENAARLGLLPQSEAEVLRSAARLYHDLTQIVRLCVSEKFVPATAGEDLL
RVLVRAGDAPDFSSLEARVKETQAEVRAVFLKLLQGQG
>RPC_2348 putative signal transduction histidine kinase
MTRQSSPANSQDSTELDFHGEADYRIAKSLTMISSIARLQAFKGAPADPQ
IVLLETANRIDAVAGLHNLLACSRTGTIQLSKYLEDICERSVRALCSVST
SYTVTCAPEHVVPFRLALPLGLITAELLSNSVKYSHPAGLPARITISCRR
ATRDSLTYRYQDDGVGFPENFDVGRDGHVGMRLIKSLSERSRGSHHWSSG
PLGISFEMVAPMAA
>RPC_4174 diguanylate phosphodiesterase (EAL domain) with GAF sensor
MRNDLSECDQTLPLLFAAVKREGDASDRIRRALQAVRSHLGLQVAYVSRF
EGERSVFRVVDAPGLEHVIKPGDSRPLDEIYCRHILQGRLPQLIPDTSAE
PLAMAMPITAECQIGSHLSVPIELPNGETYGMFCCIGFQADCSLNERDLA
TMKAFAEIASFEIGCELEAQRELRAKQTLVGQVIDEDLMSIVYQPVWDIE
AMQPLGFECLARFSPLPLRSPDKWFADAAEVGMGVELELHAIRKALQAIG
RFPAPIDLSVNASAATILGGDLARLFDGVPLDRLIVEITEHSSVGNYDAI
LDVLRPLRQRGLRLAVDDAGAGYSSLHHILNMQPDFIKLDIGLTQNIDLD
PARKALARALVGFARDTGSRIVAEGVERQSELDALRSIGVKKVQGYLLGR
PMSLQDAVALCPTRRRRKTPLRLSA
>RPC_2533 cyclic nucleotide-binding domain (cNMP-BD) protein
MIQSRRNRLLEMLPRDDLNRLRPHLHSVVLDYKMPLYEAFAPINDVYFPV
DGVASLVSTMADGSSAEIGTIGNEGIVGTPIILGDTVAPTNVYVQVPGHG
LKLKAEILRQALQQSVATRTLMLHYVHAFFNQVAQSAVCNHFHSIEQRCC
RWLLMTHDRVQAEDFLLTQEFLAMMLGARRSSVTEAAKRLKNRGLISYVR
GHVTMLDRAGIERTSCECYAVSKAEFDRLLGAPKGLGATLESANG
>RPC_2265 signal transduction histidine kinase
MSADEGLPASEQVDQILGSSKLVSAIENDKYKHLLDAVPVAVAVSRGTGD
EQSMVYANRAFEQLLSLPPSEVEGQRWVFLDGFRDEDNPSRTLGEAIRDS
EDFIGVFRPVAPADRLVIVQAYASVIESDDGVENFRIAALVDVAGRERAQ
IEQFENQIRDRDMLMRELQHRVKNNLQLITALVRLEARSAAEGESVALAR
LASRIDALTVLYRILSAENAVGDIDLGQYLADVADAVMQANAMPSIEINV
QASYCPLSINIAMPAGLLVNEMLTNALKYAFVGRSSGKIKLICSSDAGRV
TVIVSDDGVGLGDNVEWPSPRKLGALILQTLKENAKNVTFRAESIRGQGT
FFTFGFDLVAAPAPN
>RPC_1228 response regulator receiver domain protein (CheY-like)
MAGLSKKKPIVLVVEDELLLRAAAVDFIEAAGFSVLEAASADEAIEILEA
RDDIRVVFTDIQMPGSMDGLKLAQAVRGRWPPIEIIATSGHVSVGPDDLP
ARGRFVRKPYSPAQIASMISELIT
>RPC_4931 periplasmic sensor signal transduction histidine kinase
MTGHSLRLRLIAGGAAAILIALTVAGFGLTVLFERHVTRSVVDDLDVHLK
QLLAGLDVDADGKPIVARPPADPRFSDPLSGLYWQISDDRSELLRSRSLW
DSMLALPADEVASGEVHHHTLKGPAGAQLMTAERQVTLTLRDQPTAVRAA
VAIDMARVSAASAAFAKDMVVALGILGVVLAIATSVQVMLGLRPLDALRH
GIADVRSGHSRRLPAAVPTEVLPLVEEVNGLLAAQEREIERSRGRAADLA
HGLKTPLAALAADAGRLRERGEAGLARDIEAVGDAMSRHVDRELARARVR
GEPGRSLGVATELAPLTRSLVAILSRTPAGAAIGFDIQVADDVTLPLDRA
DLAEVLGNLLDNATRHAASKVRIVAAADAGGLGVVIEDDGAGIAAAARSA
ALERGIRLDQRGEGSGLGLAIVQDVLEAYDWTLSLEVSELGGLKASCRPA
>RPC_0781 response regulator receiver domain protein (CheY-like)
MHKILLAEDDNDMRRFLVKALENAGFQVSSYDNGLSAYQRLREEPFEMLL
TDIVMPEMDGIELARRASELDPDIKIMFITGFAAVALNSDSEAPKNAKVL
AKPVHLRELVSEVNKMLAA
>RPC_1466 diguanylate cyclase (GGDEF domain)
MSWIAPELRPLSAVVAATLACDGTLIEANAGFLRIARLPAQQLIGAPAAR
AFVQPSFAALLRLAPAADDEIHRGLLTMGDPMAATRTLHGRVWRRGGQLQ
VLAEYDIDELERLNAKMIELNRDYADAQFELAQSNIKLQQREAEIVALTL
TDSLTGLGNHRRFEQELSTEIKRFARTAEPLSALMVDLDHFKAINDSYGH
DAGDKVLAAFAALLRAQIRATEIAARIGGEEFVVLMPHTGLQQAMLTAER
IRTALAAVPIPPASQPVTASFGVATLATAESRDAFMRRVDCALYAAKHSG
RNCVVAG
>RPC_3976 two component, sigma54 specific, transcriptional regulator, Fis family
MATTILIADDDAVQRRLVENMVQKCGYRTVVVDSGDAAIETLTADDAPTI
DAVVLDLVMPGLDGMGVLERMRDAGLSIPVIVQTAHGGIDNVVSAMRAGA
TDFVVKPVGIERLQISLRNALNASALKGELQRLKHSRDGKLTFADLVTRS
EPMGHVLRMAKRGATSAIPVLIEGESGVGKELIARAIHGSSERSAKPFVA
VNCGAIPDNLVESILFGHEKGAFTGATERHTGKFVEASGGTLFLDEVSEL
PLAAQVKLLRALQEGAVEAVGGRRPLKVDVRIISATNRKLLDRVKAGQFR
EDLFYRLHVLPLTIPPLRNRREDIPHLLRHFLARFCAEENRTITGVSGEA
MARLAQLDWPGNVRQLENAVYRAVVMSEGTHLDLADFPLTAAAPSVAELA
GEPLLIEPAFHSTAPQLVAGHDIPIAPMPAAGSLSMLTPDGEVRPLDELE
SEIIRFAISHYRGQMSEVARRLKIGRSTLYRKLDETTHAEREARAPAVSN
>RPC_1084 histidine kinase internal region
MLPFVLIERLSMTLDRLTMTLQLLQQTCVYLVIAYLLSRTPLFIPLMNVT
VRPSHKAAAYVVFSMFCILGTYFGLQFDDSIANTRAIGAVLGGLFGGPSV
GLAVGLTGGLHRYTLGGPTDVACAISTISEGLIGGLVHRHYVGRQQFDRL
FDPWRVALVTFVAEVMQMAIILLITRPFEVAWSVVDHVALPMWIANTLGA
GFFMRILQERRMLLERQSSVFSAKALKIAARAEGILRNGFNEDTTKLISR
IIYEETGVGAVSITDRDKILAFIGIGDDHHLPGTPIASEQTLEAIDHNQV
VYADGNETDYHCSLSPTCPLGATLVIPLLGEDEQVIGTIKLYEPRNKLFS
KINRTLGEGLARLFSTQILAGRYDEKKQLLARSEIKLLHAQINPHFLFNT
LNVLSSIIRTDPERARELVLHLSTFFRKNLKRPTEEATLGDEIDHVNAYL
QIELARFADRLSVEFDVPEALRSVALPAFSLQLIVENAIKHGIAHMLEGG
VVRIVAKEVEGVLLLSVEDNAGLYGNHEHGDGLGMNLVDRRIRNRYGDGY
GLDVSCEPEIRTRVTMRVPMQLVAA
>RPC_4028 response regulator receiver (CheY-like) and unknown domain protein
MSRSQLVAEHLPLLRRYARALTGNQASGDAYVGAMLEALLQDQNLLDEQH
GARAGLFRLFTRIWNSVALNDDTEVMTLPLPSERRLSNITPLPRQAFLLL
SLEGFSEEEVAFILALDVTEVRKLTEVAGREMAAEIATDVLIIEDETFIA
MDLESLVKNLGHNVIGVARTHADAIALAKTRKPGLILADIQLADGSSGLD
AVNELLKTFEVPVVFITAYPERFLTGERPEPAFLISKPFQPAMVSAVASQ
ALFFQRNSRNRAPRAAAS
>RPC_0279 cyclic nucleotide-binding domain (cNMP-BD) protein
MSIEDDVALLERVPTLRLLGDASLRMLAIGSDQHIYARGDTLFNAGDIAD
AGYVVQRGSFKISADDAGSHEIVAQPGALIGELALMLAMPRPSTAVAQEY
SAVIRIGRGLFQRVLEADPAAALRLRDEFAARTTRIANEILKAGARLGS
>RPC_4402 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain)
MKSVDQLGRAQLATFGRRKVAPRVCIADSKRHLRTFLADALEDLGFITGE
CGKADEFAAALDQHQPDLVVLGSSVEGVEAGRMIEMLAERGFAGHVLAIC
PRESIMTAAIQQMGREHGLAMLPPLPTPFSAGTLHQGLAMLLPAEPVPSP
AVDVAEALKAGWLELWYQRKIDTRSLMPCGAEALVRMRHPTWGVVPPAHF
IPAEDDQHFRTLSEFVINRTIADWHYLLERHGATDLSINLPISFLANRDA
VHDLCSWMPTHPAFRGLIVEVDAAEVIANVDLLVDTAKRLRLRNIAIAID
RLGVDWPALMDLDSFPFVELKVDREFIAGCADDRLKQTVCRRIVELANGY
GARTVATGIENRADFLTAHEIGFDAVQGYLFGKPMGLKKFARSATAQPLR
LYD
>RPC_3929 histidine kinase
MPINDPKLNPSLVVAALQRLSRALPAAKSISDTRFLIEREIELASAASNP
RESSASYSQRGRSFFDELQIEILSLVRAARSREDLLELVIARLANGDTNE
RTAICYVVFEGYPTEAGYLEVRPIMQAGLQPDKFVAYSRTVGQLADSPIL
TRLFEDGLTVDFSFTEYLRGIGYHGEFDSLIEGSHDGIWLAGVPLPGIDA
TMPDRALIGLYPSIGTRDLPNLPRGARPEWRLMEFLQTGYALLNHQLEGR
AELVAADRRNLISDLAPQAIFHELATQIGTLENQLDNILSAGTSLDDKLK
PKPRELKRISQALEGSFNAVHRAKRITDAFNNLDRRTKATVRVGDLLDEV
TTIVEYRRKKYGIAVSIDGDGLDTSLKTDAALVEHLILNVVVNAIDAFVG
QRLSDQKIQILAETRGDRMRFTVSNNGPSIDFARREMIFEKGVTSKARGS
GHGQGLYICRLLASYMLGSIELLKVAPTGMTVAFAIELPIVGRHGEDLMG
QRAKSRR
>RPC_1681 multi-sensor hybrid histidine kinase
MSQGLSLSTRLTIAIVALVVATAGTVGYLSYRNIAAIAVPRALVRLDAHA
QSVAVDLANIVKNARADVKGFRDVIGLEEIIALSRDPSLARSGGLTPAQW
RARIARRFAAELEAKQHYAQFRIVGIADGGRELIRVDRRSGDGKVRIVAD
ADLQQKADRGYFKQAAAAPDRSIIVSPIELNQENGAIELPPQPVVRISSP
IFAPDGQLFGLLIVNIDLRPAFATLKARAAPDTTIYVVNERGDYLAHPDS
EREFGFEFGTPFRVQDDFPAAARALAEGDPHPGLIEHRGGKRYGLAMASL
RLGDGPPVSVVEVIPEDKIIALALKALRDSSLLGGTIAVLGAMLLGFILA
RTLTRQLTQMTAAVSGFADGKPLVVPLNAGGEIGVLARAFQNMAREVDEK
NAAIRREKDIFEGIMSAMAEAVLLIDADGIIVYANRANQELLGPIATDGT
TWRELYDIYLPDGTTLLPRQQWPSARCLRGEQVDGFELVYRRRDSGKTVH
VMGSAHPIRGAEGARAGVVVVYRDVTATKEIERQLHQSQKLDAIGQLTGG
VAHDFNNTLTVITGTAEILFESLADRPNLQQIAKMIDDAAGRGAELTKHL
LAFARRQPLQPRNVDVNTLVLNTAQLLRPTLGEQIEIESMLGNDAEPAHI
DPSQLSTALLNLAVNARDAMPNGGKLTLETGNVVLDETYAHANPEVTPGP
YVMIAVSDSGTGISAAILDKVFEPFFTTKDVGKGTGLGLSMVYGFVKQSN
GHIKIYSEEGYGTTIKLYLPRASADAEELAPTAPIKGGSETVLVVEDDAM
VRNFVVTQLRSLGYKTLTAANGAETLAQIDAGATFDLLFTDVIMPGLNGR
QLAEAVKQRRPATKVLYTSGYTENAIVHHGRLDPGVLLLPKPYRKSELAR
LIRAALNSGIAPADDIHIGLSGRVSS
>RPC_3930 hypothetical protein
MSYMAKQASTKKGTFSKATAARQRSRSEDHNSVTKILERLDKEPGRKHRF
LLVDNEESVIQDWKSTLFANPKLGTHAEFHLFLFLEPNQKYSKSGVTAGT
LDDLLQLIRRRILHDNAFDGFFIDGNLGAGAKGLDGLGLIRHLRDTIEEI
RYCPFALVTVSLENTEFRQQAADSDIIRYMPKFDSNDASLLPRMILEFSE
MHAQSRQAAWGNLNQTIALLIETGGGAAAVGQAAAEFLIKHMGVKALYFR
DGAHGVLSAFTMVDHFDAGKELKLVDAPHFFRNFVSPGSINNTDPWLCLE
HISKSGSESPRIIGMQRWRALLARVGDPVDREGGVYAIYSPPEHARFRSN
EGPSLHHLAVQLSNARASEREGDKLRARQRRITELLNVFTHPNSSEEVGH
PLASFLHAEFGKAFGARAKATVRLFERGSGNLVRVGGPVGDLRPTKPLDK
ININDTKSTYARVVRTMQPVLYSDVGEHTHEFVFTNTDVRSSLTLPLSFQ
EACYGAANLESDQINAFSPDDQQLAGKIVETAAAAIARQRSLWFLGEAAE
LLETIAESPTGADATTLLSSAAGSLYRLCGFSDLIIAMPPVQDGQPWRVA
EVFRAIPGEEDVSRADDQLLHDWREWVRARWPRSHLCRVLQGPDEFVFTN
VLDEFDDDRSLRPDRPTLSQATLKVSTPGALQPEAMLALLFEHHHPFSSR
QKQRLKAFGQFMGRLFLAQGRARSLKSQVSIQSQEAWLGRISSTYQHNFK
LGLWSMSGWIESASKGSVSPADAIKKISEMILQLAPLVERMSNLVKPVEV
GDLDTGAMWEELRQQYNESASLNEVVLQPAPADLPNLRADPIFLRSIIFT
LLENAIRYAGPNTVVSVARSDNGLVVADNGRGLRAEIKAKLFEPGNTTGS
ISTGQGLYVARLMAREMDGDLVHLASETGTAFEICLVRCW
>RPC_3822 diguanylate cyclase (GGDEF domain)
MLSVPTLWVVVVVNFLALGLVWTYVTRNYPNFIAAPYWTAAAFVAASAAA
VALLRGVFDSALPQVFGSTMMIMACCLGSMGMDRFFDHPARWRITWSIVG
LSVAAFSYFSFIHVSMPMRMVVYSIGESVPLALSLRHVMWRQDKQCYPGS
RMTAAIAGAMIVVLIVRSIAALTGIGGELTVLHFNAFQAVMVLLLVFLSM
MWCFGFLLMTIDRLRAEVAKLAMLDDLTGAANRRQLLQRLEEECALSRRT
GGPFALLAIDLDGFKAINDGYGHGTGDACLRDFTRTAQSCLRPGDLLARL
GGDEFSVLLPATTLREGAMIARRILEACRGTGQGTAITLSVSIGVAQWTK
LVGADAERLIAAADHALYAAKHGGKNRHAVYDPTVDHPVNAAFDGMPPLR
KTA
>RPC_4694 putative adenylate/guanylate cyclase
MNPRLELKVRALAIMLTGGLLGGLVFVISRGHTTSGELRAGIAYGLLISS
AIGVFELFVANGVLREQLGRLPFTLNVLVRSAIYAAIIIPIQYYELGAVL
AGLPVDDDRASFWSATIYSGLFSIAMNLLLAITNLIGTRALSNFITGRYH
SPVAENRFILFVDIAGSTGLAERLGGIAIHRLLDRTFRLLTQAVADHRGE
VLNYVGDEVIVTWPERAGAIDCRPLRCFLAMRERLARAAPQFAREFGAAP
QIRGSLHFGTVIVGEIGDIKRAIVFNGDVMNIASRLEQSSRDIAGGFLAS
RAALQRFDAPPPVELRDLGLLPIRGRADGIDVLGLAEPAE
>RPC_3607 UspA
MVPLRAQANLEPVHRYALSLAPVELSDCSAQALNLARGLGIFQQTRVVVL
HVFDAAAAGMLNYAGVDHGKVDDYLVDSRIDAARNLIRFLDPLELQEVDY
STLVKEGLAPTTIVEVASEIRPDLVVIGTHARRGAARLLLGSVTEEILRR
LQQDILVLPFRAVPLA
>RPC_4039 transcriptional regulator, Crp/Fnr family
MPHLAFPNNSCEEFRCATHCAVRPLAICAELNPTEHQEFERMAQHVRYAP
KEALFSEDEIADSVYSLTEGIARLYKLLPDGRRQIIGFALPGDFLGMAPS
SRYSFSADAIGTVVTCRFFKGPFIRFIENKPHMLLRMNEFATRELGQAQD
QMLLLGRRSAEEKVAAFLVGWRDRLARVEGVTKTVMLPMGRQDIADFLGL
TIETVSRTFTKLEREKLIVIVPDGVRVLDPKRFDALAAA
>RPC_0413 PTS IIA-like nitrogen-regulatory protein PtsN
MTITDLVAPEAVLPALKVNSKKQALQELAARAAVLTGQNERSIFEVLLQR
EKLGTTAVGYGVAIPHGKLPKLDKLFGLFARLERPIDFEAMDGQPVDLVF
LLLAPEGAGADHLKALARIARLLRDMDVAKKLRASRDAQAIYSVLALPPA
TAA
>RPC_4869 response regulator receiver domain protein (CheY-like)
MARVLIADDEESVRLMVARALALDGHQTVTAEDGAEALDILNRDRRSFDL
LLTDIKMPIMDGIALALAAASGFPKLTILLMTGFADQRERTSGLDAIVHD
VIAKPFSVEDIRAAVADALAAQR
>RPC_1499 transcriptional regulators, TraR/DksA family
MALEKLKSYRPSEKEPFMNDRQRDYFRAKLLAWKDEILRESRITLQTLQE
ENVNHPDLADRAASETDRAIELRARDRQRKLISKIDAALQRIEDNTYGYC
EETGEPISLKRLEARPIATLSVEAQERHEKREKVYRDE
>RPC_1301 putative PAS/PAC sensor protein
MFKSPKESLGDLGALSAAKLIAAATDVALVVDGHGVILDVAFNKDELALE
LDGQGRWLGAKLADVVTSDTQMKVRELLQDAAERGTSSWRQVNHPSPGGE
DVPVLYSAVDYGRGNRLVVMGRDLRQLAVMQRRLVNAQQSMERDYIKLRH
AETRYRLLFQVSSEAVMIVDSSSETIIDANPAALALFDQSAPQMLNSSFP
SHFNGASSQAISNLLADVRATGRDNRARVHAANGPRDCDVSVSLFRQENS
TLFLIRLSSYSTMPEAGGLKATAMLLNFFESAADGLVITQYDGRIVKANL
AFLEMAQLGNAEQSRGESLDRWLGRTGVDFSVALANLRQSGSIKLFTTVL
RGEYGATAEVEVSAMSLTDSEDKPSFGFAIRNVEKRLSAATTSKRELPRS
VAQLTELIGRVPLRDLVRETTDVIEKLSIEAALELTGDNRASAADMLGLS
RQSLYVKLRRYGLAEHAPEGEGAND
>RPC_3796 two component transcriptional regulator, LuxR family
MTNTSGREIFVVDDDPAVRETLSIVLSAAGYQSICFADGEALLAVARSRC
PACILLDVHIPGRSGLDILEELHAEDYPAPIFMISGKGDIAMAVNAIKNG
ALDFIEKPFRGPEIVTRVEEAIEAFTRRRAAGLVPKVPSLNFPGREPLTM
REREVLELFSSGNTNKEAGRQLGISPRTIEYHRANIMKKLGAKNATDLVR
IVMAAVPRA
>RPC_4605 response regulator receiver domain protein (CheY-like)
MGGHSGGPGNQNAAARRARSSDMQHKVLIVDDSKLARMVMASAFRRLRPD
WDLVEAGNAEAALQALSDAAPDIVLVDFNMPGTDGLELLARIRVAQPGMP
AAVVSANAQDEIIARTRELNAAFIAKPLTDETLDAFLAGAALRLKTKAK
>RPC_3798 multi-sensor hybrid histidine kinase
MCHRVDPAMKPSSKRLLGVLFLTSFSLIAAIVGTNLFVMNNLRESTLRTA
EINLARYSLTLAEEADRSFKSLDLVLSSVGDYLGRRGVTDSASYQQTMSD
QETHLMLREKITGLPQVDAVTMINERGKLINFSRYWPIPDVDISDRDYFR
ALQADANLETFISAPVQNRGTGTWNIYIARRLNDPNGAFMGLLLGAMSLQ
YFENFFGATSPGVGTAVSLVRDDGLLLARYPASDRIGKISSGAGQRALAA
GGSLREAGDTDQQMRLHAARMLPNYPVLIAVSQTEVSALQSWRSIAALIV
AMSSLTAIVLLIVTVVIARWWIRQDQLISDAQSANAAKSTFVAMMSHEIR
TPMNAVLGLATNLLDSRLDAEQRRSVVGIHDAGDALLDILNDILDFSKLE
AGRLSLESIAFSPEALVESALSIVLPRATARGLRVRNQIDPSLPIALQGD
AGRIRQVLLNLMSNAVKFTPSGEVVVTTKCRWADESFAALEWIIADTGIG
IAEQDIGSLFTDFAQADSSISRRFGGSGLGLAICKRLVEQMGGEIQVSSA
YGKGTTFRFSLTLPLASQLPVPDTDDPVVYSDFRQRIAALGRPLRILIVD
DNPTNRLVAAKMLQDFPTQTNTASDGNEAVTAATRFSYDVILMDVRMPEM
DGLEATRAIRACDGSMQGAPIIAFTANAFAEDAIACREAGMNDFVSKPVR
KKALIEAILRVLPRPDTAGERAIAAATDGIDLAPSRQPKPGVPAATTLHV
ARDTYETMVEEIGCEATLEIIAVFVKDTDERLALLRQLSVASHRREIERE
AHSLKSAAATFGLHDLAGLARELEKTAPVITEADYIAMIGRLETAFGAAR
AAQRPDDGCVTVSI
>RPC_4918 two component transcriptional regulator, winged helix family
MSARILVVEDEEALTTLLRYNLDAEGYDVETVARGDDADTRLKERIPDLV
VLDWMLPGLSGIELCRRLRARPETKQLPIIMLTARGEESERVRGLATGAD
DYIVKPFSVPELLARVKGLLRRASPERLATVLAYGDIELDRDKRRVARSG
RPIDLGPTEYRLLEFFLEHPGRVFSREQLLDSVWGRDIYIDERTVDVHIG
RLRKLLNPGREQDPIRTVRGAGYALDDRFAAKAE
>RPC_0827 two component, sigma54 specific, transcriptional regulator, Fis family
MAPARVVLIVDDDEAIRHMLAAVLGKEGITVIAAADGAEAVTLFGLHRMP
VVLMDIRMPRMSGMQALAEIRKLDRSAAVILMTAFAEVETAVRAIKEGAF
DYIIKPFDIAELKLLVGRALQMRGLRDDNAALHRALSASYRTHRILTASP
RMTELLQTIAKVAKSQATVLVTGESGTGKELVAGAIHYSSQRAAGPLVKV
NCAAIPDGLLESEFFGHEKGAFTGAMARRRGRFEQAEHGTLFLDEIGDIS
PALQVKLLRVLQERTFERVGAGEPIHTDVRIVAATNRDLEALVRQGQFRE
DLYFRLNVVPLVTVPLRERPEDVQLLANHFLQHYAAENQIEVAGFDDLAM
ECMLRYPWPGNVRELSNAIERAVVMSTGHIIFVEDLPHRISAPGPSAAPP
SPSEASAEADRGLRELVMQYEARVIAEALERNGGNRVRTAQELGISRRSL
LYKLQDYGIE
>RPC_3945 transcriptional regulator, Crp/Fnr family
MPTVDSSLVADLPLFAGLAAAELDAVLTDARSARVAKNAAVFRQGDEAQS
FYVLLHGHVRASKTTAGGEQVVVRYVSPGETFGVAMAIGLQRYPATATAV
EESVVLAWPAASWPRLVERFPQLATNTLRSVGSRLQETHTRVVEMSTQQV
EQRIAHALLRLAKQAGRKVENGVEIAFPISRQDIAQMTGSTLHTVSRLLS
SWESRGLIESGRQRIVLRDPHGLVLLSEQVPGDIEPAKKI
>RPC_3790 two component transcriptional regulator, LuxR family
MDQKASPSRLRIFLADDHPVVLSGMKTLIAADDGLEMVGEATDGPEALRS
ALELKPDVAVFDLSMPGMNGIDVAQKFLAARPDARVLVLSVHEDGVYLRR
LLKLGVAGYILKRSASDELIRGIHAVANGGIYLDPAIAGQALGRPAPMAP
AGNETSAISELSTRELEVLRLASVGHSNKVIAIRLQVGPKSVETYKARAM
EKLGFSSRVELIRFALSMGWLDAADL
>RPC_4233 two component transcriptional regulator, winged helix family
MRVLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVDLGKLYDYDIILL
DLNLPDMSGYDVLKQLRVSKIKTPILILSGLAGIEDKVKGLGVGADDYMT
KPFHKDELVARIHAIVRRSKGHAQSVIQTGDLVVNLDTKTVEVGGQRVHL
TGKEYQMLELLSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKK
LANASDGRNFIETVWGRGYVLREPHEEEARIPA
>RPC_1905 putative signal transduction histidine kinase
MQVAASVTSSVHEIGLRVWSRRLAQVLWYERPVRTRILVALVALSALISV
LGGAATLFGIRNRIEAEFISPTALAEQYIIQTNRNFAADEQLLKTLPIAL
AMQLRHIRHLKVNVLDAEGNSVALQRSIDEPQPSASEVPRWFAALAGNVA
EHREIPLTAGARRIGTVILNSDASDELAEVWQEAQHQGVVWLAANAVMIA
AFYFILGRILQPLVTVSRGMADLGKGNYQVQIDPPRGPEFDAIIGSFNGL
ASALSAARAENGRLYRELITVQEDERRQIASELHDEAGPCLFGITTTAAA
IEARISRGHHDEAAEISRQLAEIASIAGRLTALNRQIMKRLQPIALGKVT
LGELIGDLVADFARRYRDVRFLNDLNIAPRSYGDVVDLTIYRCIQEGIVN
ALRHGKARCVNVELSDVAPSADAAPTALLLVLRDDGQGIAAAATPGFGLA
VMRERVQSLGGVWELSQNWPCGVTITATLPLSWPRPTAANRRL
>RPC_4310 periplasmic sensor signal transduction histidine kinase
MTRAPSLKLRLVSASLAWVVVSLAVTGVLLVWLFRSHIERRFDLTLHDHL
EELAAAAELDERGGPTLSWEPADPRFKPALSGWYWEIRADGGILRASASL
GGAPLAGQSPGVGRPASYQYVQGPAGESLRVIVQDIVLPNRAAPLTVLVA
GPCLDIHADVRSFAGTLALSLGLLGLTLGALVLLQVGYGLRPLRAVQSAL
NAIRFGTRDQLDETAGPVEVLPLIQEVNALLRQRQATIDLARAEAGDLAH
ALKTPIAVISNEAALIAGASGAVLKAEIDRMRRAVEHHLVRSRAAAGFRA
PHARAALAEVLADVRFSLQRLYPERAVSIEAPDDAWFAGQADDLGEMIGN
LADNAGKWARHRIAIGVALAGQRLIVTVDDDGPGLDGADRVAAIQRGGRL
DSEKPGHGLGLSIVAHLAELYGGRLTLTPSPQGGLRAELDLPAAA
>RPC_0654 multi-sensor hybrid histidine kinase
MFRRSVFPNSVARSVLMLSWIAVLVILGTSLQFAVSAWRNDFRARQVVDL
VTLDRTVFQSTAEVRLEIGSVGVALLRDDDPSAGVQLGLGAMLDAWQRAE
AALAASSLPDRDRLIGRLSRAGEAFQTARRYVDAEAALPRAERDANRIEP
WRMAVYDLAAAIDALGTSVGRELRAHDLQLGELVAIRQMSFTIRDRYSRQ
CSAFRPAVQLDTPLTPAERDRWREDIGAYAALWAQMQRIALQLPEETGFA
PLVAEGLRRTEAAQSVMTRTLDGLSGSGRPAFDAAAWSENCVSAYSSILG
VGSHALDLETRRADNSRAEAFRTGAVSTAVLLLVGVLGFISLSFVRTRLS
APMRNIEAALATLRAGDLDTPIQVPRWNDEPSAIIRALEGFRLEALEARR
MRLRIDQTRDEMVKHSEKLGRTKSQFLANMSHEIRTPLHGILGTVQLLAQ
SRVSDEQRSWVQALDQSGRLLRDILDDILDFTRLESGRIRVDTAMFSLTE
RIAMVNATIRASMERKGLDFTVEIDPELPEVLCGDAGKLGQILLNLLGNA
AKFTKQGGVRLTVAGDAGRPDRLRITVADTGIGIAPEALAHIFEPFSQAD
GSVARRFGGSGLGLAVCRGLLDALGGDIDLQTEVGRGTSFTVLFPVSRGD
HDAAPVAGVADELVDELPNLHVLVAEDNPVNALIVRTMLERDGHRVRHVE
TGGDAVAAAVAEDFDVVLMDLAMPGLDGTSACRQIRACGHPTRAVVPVLA
VSAGGASADDIDAGFDGRLEKPFHREDLFSALATAIGLRSVRRATRRESL
GAIGEQARDLGVEGARKLVSLYLTSQPPLLAKTVASVRLGDHDQARVLAH
RLRGAAAHIGADDMAAAAATLERAAADDGAIVVAAEVLAKLGQTHFTAFA
AYAEDELAGVWSNAAAKDRAAIDRAYQATFSANT
>RPC_1085 carbon starvation protein CstA
MIHALPFVIGTICVLTICYRFYGIFFVRKVLQADDGQVTPAHSMKDGRNF
VPTRKWVNAGQHFAAIAAAGPLVGPVLAAQFGYLPGFLWLLIGACIGGAV
HDTVVLFASMKYRGQSLSEVAKAELGPVAGWCTGIAMLFIITITMAGLSM
VVVHALERNAWGTFAVLMTIPIAMAVGTYEKLTGRSKGATYFGVFAIIAA
VFIGPYLQGTMLGDWLTVHERTVSLAIPAYAFFATALPVWLLLTPRGYLS
SFMKIGVFGALIVGVVFINPVVQFPALTDFIHGGGPVIGGPVWPFISITI
ACGAISGFHAFIGSGTTPKLVDKWSDILPVAFGAMLAECVVGVMALIAAT
VLHPADYFAINASPAVFQALGMTVVDLPRLSQEIGMDLYGRTGGAVTLAV
GMTEIFTKLPWFTHLASYFFQFVVMFEAVFILTAVDSGTRVARYLIQDLA
GEVYKPFKRLDWMPGALGASLLACLLWGYLLNSGDINSVWTLFGVSNQLM
ASIGLMVGATIILRLAQKRIYMLTCLVPLAYLYVTVNYAGYWMISNVYLN
PAAKGYNLFNAGISIIMLTLGVVIMVASLWRWKKLLRRAPSNTDAGSLLA
TATAS
>RPC_4303 transcriptional regulator, Crp/Fnr family
MDLSDLDWLQRFPPLADLAPSESAPLIGGAVAMQLPAGATVFAPEQPCGY
FIMVCEGQVRVYQLDADGNEIVLYRLGPGSMCILTTLALLADTAYSAFAV
TETPVHAIGLPAATFHDLIGRSARFRSFVFNAQAARMADLMRVIQQVAFE
SIESRLAARLLALAANGRDVSITHQQLAAEIGSAREVVSRQLKCFEKRGW
VSLGRGRVELRNAAPLRAAAQPAR
>RPC_2288 signal transduction histidine kinase
MGTNFGDASEVAPSSALRCDEVRYRLRQQSLLVEFGRHAMQTRDFRQILQ
RATELAAEGLETTFAKVLEYIPEENRLLVRAGVGWAPGTIGKVSLGADVE
SPAGFAYQSGEAVISNHLESETLFRTPRLLAEHGIRRAINVLIPQGGEGN
APFGVLEVDSAEPGQFDRGDGYYLDAFAGLLGIAIERQQADAELQRALEH
QALLTREMSHRVKNSLTSVVGLLRVQSRGAVSQDVKDALDDASSRVATIA
QVHDHLWRGNKIGFVELTDFLAELCRNLQANAGGHTLRCQADPMLILADH
AIPLGLMINELVTNAVKYAYPGRRGGIEVSAREIDGHLQLAVADQGVGLP
PDFDIEQPRASLGFKVIKGLVRQLNGQLKVESGAGGGARFVLELPILPDR
>RPC_1874 two component transcriptional regulator, winged helix family
MINQTHLVVVDDEPVARESLAAYLEREGFRVTMAEDIRGLRGVLEHQKVD
LVLLDIRLPGQDGLSFLRELRSRSNLPVIFVTGRVDEIDRVLGLELGADD
YVTKPFGHRELLARVRTLLRRTSESYRLEHNNLARHFAGWTLDLSQRCLT
DAHGEDVRLTRGEFDILAALVRRPGQVLSRDALLDESVHRDGAPNDRTVD
VLIARLRRKIETDPAIPRLIITEHGLGYRFVGPVH
>RPC_4763 cyclic nucleotide-binding domain (cNMP-BD) protein
MGSVNQSPNEFLAALPLDDFELLLPYLRSVDLKLGEVLVEAGTLLTKVYF
PHSGIISKIISFAEGEKIDVAMIGREGVFGGSSTLGGAISSMGGVVRFPG
RASMIYAAHFHKVMNRSPRLRAALQHAQRAQAMQSEQIAACNASHGVQAR
LCWRLLLARDLARSDILQLTQDSLAHMLGVQRNSVSAVAITLQRAGILRY
SRGLLTIVDPAGLKARACECHQMIKARSEGLSIAEAL
>RPC_4243 MCP methyltransferase, CheR-type
MSPADYDFLCKLLKDRSGLDLSADKRYLVESRLLPLARRHDLPGISELVQ
KIRAGAEAITAEVVEAMTTNETFFFRDKLPFDHLREEIIPALLQARAGRR
ALRIWCAAGSTGQEPYSIAMVLKEMAAQLSGWRVEIVATDLNEAVLEKAK
SGLYSQFEVQRGLPIQLLVKYFKQTGELWQLNPEIRAMVQHRKLNLLQDF
SSLGSFDVVFCRNVLIYFDQDTKISIFNRIAKVLEADGYLALGAAETVVG
LTDAFKPHPDRRGIYRPNADRRAPSIVPAMQPALKLVAAR
>RPC_0359 periplasmic sensor signal transduction histidine kinase
MTDTEVSDFRHPRRHVRLDTILRLRWLAALGQLAAVFVVAHGLEFELPVV
PCLGIIALSALVNLALQIAFNPMQRLEPLHAAALLALNIAELAGLLFLTG
GLQNPFSFLFLGPVLIAATALPTRMTITLGIFAASCAGALLFYHLPLPWD
PEDPVVLPQIYLIGVWLSILLALGVTSLYTFQVTEEARKLSDALSATELV
LTREQHLTQLDGLAAAAAHELGTPLSTIFLIAREVERSVPADSPLAADLR
TLREQAQRCREILAKITQLSSSGAPFDRMPLSTLIEEAVAPHRDFGIEIR
VRIAVAGVSEPVVMRNPAILYGVGNILENAVDFARTAVEVNAWWNAETVQ
IVISDDGPGIAPDMLRRIGEPYLSRRRAAETSGGHGGLGLGVFIARTLLE
RTGAKVSFGNKTFPDHGAVVQIVWPRADFETVQTATATEA
>RPC_4906 two component transcriptional regulator, winged helix family
MRILVVEDDAMIADGIRAGLTLAGASIDCVATCEDAAAALAANNFSAIVL
DIMLPDGSGIDLLRKLRAGGDTTPVLLLTALDEVGDRISGLDSGADDYLG
KPFDLDELGARLRAIIRRRDGRAATCLEHGAIRLFPADNNATLDGAPVPL
SRREFAVLHALMERPGVLRSRSELEERLYGWGDEVESNAVEVHVHNLRAK
LGRAAIETVRGIGYRMRPL
>RPC_2834 diguanylate cyclase (GGDEF domain)
MIAPRDEHERTMAYAEVALRQIRSLRQDALPRNYEIWYVYATGHNAPLNK
IINETLARSGKLSESDLEQIYDTYLSHGRTTDRIDKIGARVVSEIEDVMS
LITDALGLTASFGDNLSGANQKLSLAKDRAQVKAVVERLVASTREMQQAN
NALETRLSTSKLEINNLQHNLEAIRAESLTDPLTGLGNRKHFDRAVDDAV
RCASASRQPLALLMIDIDHFKSFNDTYGHLTGDQVLRLVGMSLKQSINGQ
DIMARYGGEEFAVVLPNTGLRQAIAVAENIRQTVTSKELKKKSTGEILGR
VTISVGVSTLRADDDTDSLIERADSCLYAAKRNGRNRVICEIDRDDLDHD
RIQVA
>RPC_0366 GAF sensor hybrid histidine kinase
MDDASKRPPIPVAPDDNPASTDATKIDKLLRQQAAIARFGTFSLREWDLS
KILNEAVRVCAEGLDAPFSKVCRHRPEQNDLLIVAGYGWQDGVVGHVVSR
ADMSSPQGRAFSTGTPAVCDDLKKDRYFDPPAFYAAHGIVSTIDVVIRGS
GDQPYGILEIDNNQQQDYDQYDVNFLTGFANVLAEAVATASRARELQDAF
DRMKRLAEDKERLLQEKNAVDLQMRQAQKMEAVGQLTGGLAHDLNNILTV
ISGTIEILAAAVADRPQLAAIAKMIDEAAVRGAELTQRLLAFARKQPLHP
RAIDVNALIVEATNLLRPTLGDHITLVTTLAGELSRALIDPGQLTNTILN
LALNARDSMPEGGEVSITTRDIVLDASAAAANELDAGSYVLVAVGDSGHG
IPADILPRVFEPFFTTKDVGKGSGLGLSMVYGFVKQSNGHVVIESVPDHG
TTVTMLLPQATGVAQPQLELVSQPKIQGGTETILVVEDDDLVRRYVIGQI
ESLGYATLTAANAAEALVVIDSAQPIDLLFTDMTMPGALNGRQLAVEARR
RRPALSVLFSSGFTEESVVHDGHIDAEMLFLAKPYRKADLARMIRVALTG
TAQPQAVAQPGAPIPAVA
>RPC_4932 two component transcriptional regulator, winged helix family
MRVLVVEDDRRIAADLERGLQAAGYVVETVRDGEEAWFRGDTEDYAAIVL
DLGLPGMDGLAVLKRWRGNDRRTPVLILTARGSWAERVDGIDAGADDYLP
KPFRMEELLARLRSIVRRSAGQACSVISVGDVTLDERQMKVDVGGVPVNL
SPLEYRLIAFLFLHRGRVVSQAELSENIYGNEDAHDSNAIEVLIGRVRKK
LGSELIETRRGFGYLVAGSGT
>RPC_3805 response regulator receiver domain protein (CheY-like)
MSTRRRVVTADDSAPADTILGLLSLLVVDDDRAQRMLIAAAAEKAGYEVT
QADSCAEGIELLRSRRYACVTLDLMLDDGDGNEVLQAMADVDYHGPVIVI
SGMNAERRSASRLFARSLGMELLHSFPKPIDLAALRISLANLRSTLAGLP
IVHSWGEVRGPRFERDA
>RPC_3584 UspA
MGLKNIVVFVEPSNAGATRARYAVELARRHGAHLIGIFVASSDGPIPANA
YVRGRDAMRRLIELHDANAIETTSVASRNFNTATNSADITYEFRIIREIE
SDDTKLHCLHADLVIVGHPRPGGLPLNSSAEGLLLATGIPFLIVPDGWPS
GAVAQRVLLAWNASREARRAIADSLPLLSAAQSVSIVVIDAAKNRLHGEN
PGADVAVYLSRHGAHVTTEPIDSNGSPIADVILQHAVHGGFDLIVLGAYS
HARVREAVFGGVTRSLLKLATIPMLIAH
>RPC_1830 two component transcriptional regulator, winged helix family
MRLLVVEDDPDLNRQLTTALTDAGYVVDRAFDGEEGHFLGDTEPYDAVVL
DIGLPKMDGISVLEAWRRNHRAMPVLILTARDRWSDKVQGFDAGADDYVA
KPFHLEEVLARLRALLRRSAGHAQSELTCGPVVLDTRTGRVSVNGNPVKM
TSHEYRLLAYLMHHSGRVVSRTELVEHLYDQDFDRDSNTIEVFVGRIRKK
LDVDIIQTVRGLGYLLTPPPAAPAAHQRP
>RPC_2520 response regulator receiver domain protein (CheY-like)
MMTTTAPAGSVFLVEDEAMIRMMVADMLEELGYRVVAEAGEINEAIRLAG
STAFDIAILDVNVNGKVISPVADLLKARNCPFIFATGYGAQGVPEDYRDR
PALQKPFQIETLAQLLASTLKGATV
>RPC_1305 TspO and MBR like proteins
MAARRSFWKPVLIAAAVATCIGTIGGLLTDTGLWYQSLIKPSWQPPDWLF
GPAWTLIFALAAMSAIYAWRSAENESQRRWVVALFALNGLLNVLWSTLFF
VVKRPDWAVLEVVLLWLSVLLPILVFWRRSTTASYYLVPYLLWVSFAAFL
NLTVVRLNAPFG
>RPC_1594 BolA-like protein
MPMDARDIESMIKAAIPDAEVTIRDLAGDRDHYAATVISESFRGKSRVQQ
HQIVYQSLQGQMGGVLHALALQTGVPDS
>RPC_0360 response regulator receiver domain protein (CheY-like)
MLSGRPGDARTVNAIPELSDYADRSLLIVEDDKPFLERLSRAMETRGFTV
TACDNVADGLLQIGKAAPAFAVVDLRLGDGNGLDVVAALKQQRPDARAIV
LTGYGNIATAVTAVKMGAVDYLSKPADADDVVAALLASGSEKSELPNNPM
SADRVRWEHIQRIYEMCNRNVSETARRLNMHRRTLQRILAKRAPR
>RPC_0542 multi-sensor hybrid histidine kinase
MKLSTRMALAMVALVSFTTIALGLLTYHSVMTLILPRALDRLQTHARVTA
MLLDASLRSARTDAAIAQTSGAAMMMHLRKQFGAAPDKIESEWKEATAER
FAAEMSGKPAYAQMRVIGVADGGMEIVRVDRTGPNGAIRIVPDDELTRRG
DRDYFLQGIKIGPNQIHISRVELNKKATGLELPLVPTLRTVAPIHHPDGA
LFGVIVINVDLRPAIAEIRSSGKPSALVYMVNDAGDYLVNPDPAKEFGFD
LGRRFRIGDDFPEFASALQQTDARPRVMQDRDGQRFGVGWQWVRLAGGPR
VAVIEAFPYGTLMSVQTAVSNSTLIGGAAAVLCAILMAVGVARSLTKPLV
QITKAVEGFSRGEMIAISATGGNEIDVLAGAFIRMTAESQRKTAELNEEI
AERSRIAEVLNNTLNNMVDPVLIAGADGHVILTNFAARKLFGNPTGVGNM
NAVRTFERFYSDGVTPLPPQMSPLVRAFRGEIVENFEFVARPLASAHKSY
LVANGRPIRSEAGILQGAVMVYHDVTQTKKAQDELRESERMARAIIDTAL
DAFVQIDPSGAITEWSPHAETLFGWSRNEALGENIGVLIFSPDQTSETKT
NYRKFIDSVDHGGTGYRIETEATRRDGTTIQIEVALTALVRNGGHVTNAF
MRDLTEKTIAEQQLRQAQKMESIGQLTGGIAHDFNNMLTVITGTIDILGA
AVADRPECATITKLISDAADRGAELTRHLLAFARKQPLQPCETDPNTLLS
DLQNLLRPTLGEQIEICEVLQDGVWPIFVDRGQLDAALVNLAVNARDAMP
DGGTLTLETTNVVLDEDYVRRYAEGEPGPYVMITISDSGCGIPEAIRGRV
FDPFFTTKEVGKGTGLGLSMVYGFIKQSGGHITLYSEVGHGTTFRIYLPR
AKTEPQLVAPSVSEAVEVGGNETILIVEDDAMVRNYVTAQLKGLGYTTLA
APNAAAALALSAEGASFDLLFTDIVMPGKMNGVQLAAEMAKQHPSLKVLY
TSGYSENAVIHNNRLDPDILLLTKPYRRTALARMVRLALSAATEPERRQA
>RPC_3026 histidine kinase
MIVAAVSISTAALVYLFKPPNERQAIGALADQVELLDRAARVAPSLVSVR
QEPGGGQVEANLTAWLRQAVAERGMPRDVVVSRNDHLPLLSVPVDRGWIV
TEIADLPPEGGILNRLLKWLAFVTFGVLPVALFFANRMVKPLVVIERAIA
NVGPDGLLPELPIEGPAEVRLAAKALNSLSSRLKVAMDSRMRVVAAAGHD
LRTPITRMRLRAEFVEDDDDRTMWLKDIDELDRIADSAIQLVREEAGKTT
PESLGLDLLIAETVEELRALSYDVNLTRTAAGCVLADRTSLKRGFRNLII
NAATHGKRARVAIESAPSEVSVIIEDDGPGIPSDMLGRVFEPFFSANRAR
TKHFGGAGLGLTIAHEIVQRAGGTIKIENGRLRGLMQTVRLPAHRSS
>RPC_1309 putative PAS/PAC sensor protein
MVHAHAPTAFGKADLSNCEREEIHLAGSIQPHGALLVVSEPDHCVIQASA
NAAEFLNLKQVLGMPLADLDGDLLIQILPHLDPTAEGMPIAVRCRLGNPA
LEFDCLLHRPPEGGLIVELERAGSSLDLLEQIATALEAIRSTTSLSGLCD
QAAALYRDRTGYDRVMVYRFDDEGHGEVFSERCRSDLEAYLGNRYPASDI
PQMARRLYEQTRVRVLVDVNYQPVPLQPRLSPLTGRELDMSRCFLRSMSP
IHLQYLKNMGVRATLVVSLMVGGKLWGLIACHHYEPRFIHFEMRAVCELL
AEAIATRIVALESFAQSQSEIFVQRLEQRMIEAISREGDWRAGVFDTSQS
ILQPLGASGSALIYEGQVTTAGEVPGTQDIRELGAWLDRQPRTAVIYTAA
LGIEVPEFAGLTKVASGIAAIPVSSNPGEYLIWFRPERVRTVTWGGDPLK
PFVIGDNPSDLSPRRSFAQWHQLVEGTSEPWGPGDVAAARAIGATVADIV
LQFRAVRTLIAQDQLEKYSRQVGISDQPVIIADIEGKILLINDAFRSLLP
KDHVPSQRLDNLAGAFCNPEDFLLRVHDLITHHRSWRGEMLLRGVGNEAK
PLLVRADPVFPSKDRVLGFVLIFVDVTDRKAAEAARSRLQEGIMKSHRVG
SVRLDTKTDLIYQNLLSSVVENAQLAALEITYGVETSRIAGMLESVRNST
LRTAEVLQHLIWHSSRTSGDDK
>RPC_4480 adenylate/guanylate cyclase
MLTCPDCAVTVQPTQRFCANCGIALSAAKPAARPAATPDIAEHRQLTLIF
SDIVGSTTLTATLGAETYRELLRSFREITARIVNQYQGQLARFEGDGMMI
HFGFPIAREDDAFRAVQSGLDLQEAVGVLNERYRPIGAGDFFQIRIAVHT
GTVIAGDIQSETTREQMAIVGEAANIAARLQSLANPGSTIISQDTYDLVG
ARFDCRYLGAPALKGVERPIKIYEVHVAEAGEELRRGPAPGRMIGREKEI
ARLEHLWQRTLTGESTLVVVAGEAGVGKSRLLRELFAALGDQKFLSIVLK
CSQLYQQSALHPFVHYLTDTLGLSRVPRAEKFDRLTGALRLRFADPSEHI
AILANVLSVPLPEGYVPARDYTPQQEKARFQEILTAWLLRETESQPVLLV
VEDMHWADPSSIELLTAILPKLNNARTCAIMTFRDDCDRTWIDRLQPRLI
PLQRLDPHQTTDLILEIAHGRSLSSEMLETLSARTDGVPLFIEEMTRLVV
ESELAEAAEGKQPLPLTLPATLQQSLNARIDRAGANREILRLCATIGREF
DHDMIAAVWDGDPRLLSSELDKLTEAGILEPSGLPPRRKWLFRHALIQEK
IYEFGLSAHRRAAHAKIAAAIEARLPAIAADNPEILAHHYLEARMQANAF
PFLRKAAEQAIQRSAHREAAHHLNAALKIVAAMPASTQTAAQKLQLLLQA
GVVQTALGGYASPEVGHSFEQARELSRGLDLSVGLFPALHGLYRYYFVRA
DLDDASELAVELLSIAETSGDPGLRLEAHRAAANCAFQKAEFRRAANHFD
ISLSLYDDRQHASHRHTFGVDPFVGASSMAAMNALLLGDAGTATQLNARG
VAKSEELGHPFTLCWALNYALVQLQLAGRTDDVKTLAERVSALTAHYRFP
FWQTGGLIMQGWWLHATGTDRAAGIQMMTQAVDSWERLGAIAFHAYYTSL
LIEAHLRDHDAVGAETIARQAIATAQRKGETWWIPELLRLLASARALDGA
AGAEPPAAIMAQALDLARRQSSRFLEQRLLASPLLCG
>RPC_3810 metallophosphoesterase
MLIALFADIHANRQAFEVCLAKAREAGAEQVALLGDFVGYGADPDWVVST
AIDLVGEGAVAVMGNHDCAVGSPKVQLNAHAQAAMEWTRGELGLPQRQFL
AALPMKQEQHSRLYVHSDASRPENWIYVTDSSGASRSMQSTFAHVTFCGH
VHKPALYSLSVTGKMTSFVPTSGAPIQLLPGRQWLVVLGSVGQPRDGNPA
AAYALFDTESREITYCRAPYDVEQAAARIRNNGLPTWLAERLLVGK
>RPC_3529 signal transduction histidine kinase
MPSEPRPSSGAAYDEIRQDELPYRRRQQAILREFGTVALQTRDFRHILQQ
ATELSARGLGCSYAKVLEYLPNEQRLIVRAGIGWPAGTVDHVSLGADIES
PAGFAFQTGQSVISNHLQAETRFRTPALLAEQGIKRAINVIIRRGGEGNT
PFGVLEADSPDSGQFDDADADFLAGFAGLLGIAIERQHADAELQDALDKL
QQALDHEALLTREMSHRVKNSLTSVVGLLRVQARGSDSVDVKNALENAAM
RVASIAEVHDHLWRGSKVGFVDLSDFVGHLCKNLQNSAPEHSIQCYSDSI
IISADKAIPLGLLVNELVTNAVKYAYVDGPGVIRVDAREINGHLIIEISD
EGLGLPDGFDINHPRKTLGFRVINGLVRQLVGELNISKNIPRGSLFTIKF
SLDPH
>RPC_1745 diguanylate cyclase (GGDEF domain)
MDATATSPFSDPLGAHSEGDLRPAAVLAQRAKQRRQMLDLAGLSYVIDAG
VLLIYAAAGTVPAIVGAALAGCGLATVTLFLVLSEFGFADRFRDHYCVLP
QSTINLVILLGFAYFVPQVGVLFLCSLFIVYGFSALRSTPRQTVIAWSLM
AVGVGALLLLSERPISLPMATPLERFATMLVFVLALGRCMFIGVVSSALR
ERLYRRGVELKATYKRIEELAELDELTGASNRRCIMRMLDDEILRARRTA
MPLTIALIDLDWFKRINDLYGHPTGDEVLRTFAITIFANIRNVDRFGRYG
GEEFLLVLPETTQDSAQPTLDRLRRIVADLDWSAFSQGMTVTMSVGIASW
CNNETPEALLARADDALYEAKADGRNRVALSRPAPGAAPDRAAARAHELR
V
>RPC_3108 response regulator receiver domain protein (CheY-like)
MFRIDFNKLRFLVCDDNPHMRRILRTLLHSFGAREVYEAEDGATALEMYS
HYAPDIVITDWAMPIFDGLELTQMIRQPEAKGNPFAPIIMLTGHSEKRRV
TVARDAGVTEFLAKPISAKALYQRVLNVVANPRPFIKTKNYFGPDRRRNS
AANAYIGPERRNGGDAELIHQPSLLDKARVAG
>RPC_1844 diguanylate cyclase (GGDEF domain)
MRLSQLSIRTKITAVIAFLIMAVSGVGLLGVVNMRSINNDAAAIQNGWLP
SVRALGELRASVITCRNIIREHLLSDTAQAKQAMEALLEDNVKSNIEIRS
SYERLIKSPTERALYAEWVQLWEAYLHGVRQVLALSRDGGDIASLATREL
NLDTVNPIGKRADEILKASIALNNQGADAAGREAAETYQSALTSLAAVLS
LTVVIGITVGGYFIRHVGSAMASIITPMRELAAGHLGVAVPHQGERNEIG
AMADALQFFKQELIAKKADDDAMAAELRDRAKRLAVLATTDRLTGLYNRL
KFDETLASEIARAKRYKMPFSLIMFDVDLFKTVNDRYGHPIGDRVLVGLS
DLASSHLRETDMLARWGGEEFALLVTGSSRMEAYVVAEKLRTAIAHVAFD
QVGRVSCSFGVTEYRDGDIPELMVARADGALYQAKLNGRNRVELALPSEP
DLSSAA
>RPC_1842 two component transcriptional regulator, winged helix family
MVTESNTALPQSETEMRLLIIEDDRESADYLVKAFREVGHVADHAADGEE
GLALADSGDYDVLVIDRMLPKRDGLSVIGTLRDNGNRTPALILSALGQVD
DRIKGLRAGGDDYLPKPYAFAELLARVEVLSRRHGGPAEETSYKVGDLEL
DRLSHRVARGDEELTLQPREFRLLEYLMKHAGQVVTRTMLLENVWDYHFD
PQTNVIDVHISRLRSKIDKGFERPLLHTIRGAGYMIRDGG
>RPC_2360 protein tyrosine/serine phosphatase
MLDSYPRHLALTGACNFRDLGGYPGKDGRGVRWRQLFRSNHLAHLSCDDI
ALLRSLGLKNAFDLRGVEERLSTMCCVDDITVHSLPIEPAIMLALRERIL
SRVPLSAAETAELMRDSYRDFVRNNTKAFHALFAHLLEDHAPLVIHCTAG
KDRTGFACALILHALGVAEPTIVEDYLLTNRHYRLDDATAKTLALPAEIT
AVLVSVEDSFLAAAFEAVRADYGDLETYFADGLGVGRAQRAELEARYLER
>RPC_2123 diguanylate cyclase (GGDEF domain)
MPQHTPRMARLLSRPVSAAIVIALFVAAMSGAVIGLVAWKAATARQSELA
QRSAANENLAHSLAEQASHAIQSVDVAMSNIADTRPLQAADSERSRRRLS
EIVERLPQIHAIAILDADGKTGTSSLADPVLPGDALASDLAYHRDRADRA
LHIFALRLAGQSGVGLSKRLSHADGSFAGVVVAIINTEHFSALYQSFQLG
KRGSVSILRADGVVLMQSKPALSATASRHDLAPQPLPAPFTGTRKVVARD
GGWRHYGYAHAPRYPIVVAVSQHDDDILQGWRDGLRSDIAVAALLLCCVV
LLAALLTSQFRLRLSIERALRERETRYRLLADNIADVVMLLDRDAKFLYV
SPSSQAVLGIEPRRPLGRCCFDFILPADIRSVRRAAARLTDATETRTALF
RIVRGDRAQAWVEVNFKLAASGDPDGHEVVAVLRDVTERHKMEDELKALN
FRLAELATTDGLTELANRRSMDDFLRLHFAAQDQLSLLLIDVDHFKRFND
RFGHQAGDACLTRIAKVLAEAAPAPGLAARYGGEEFAIILPGVAEPHAIR
IAEAVRLTIAALAIAHPNGAATTVTVSIGIASKTKATASEEDLVRAADLA
MYAAKRGGRNRSVASSSLPDDESGVVPLNRLISAG
>RPC_2064 periplasmic sensor signal transduction histidine kinase
MSIPADRPEVVQLPAEPPVVTPARNRRAAAQRVREARDRLTSTSGTRPAF
DHELLRQYAQMRQSASIVVILLVVATGLLFAIWIQPLSAAAWTCGMLCIH
AVMIRNCGRFLGEQQSPLRTRKWRTRFVLLDLLYGVCWTAILVHPPGVEV
VSNTLLMFLMLLVVAVSSMLAANLPIAALAATAPVTAAIAANFLLSGTFD
NYILALLTVAAEGYFALLAHRLHSTTLATLEARAEKDALIGELEQAKAIS
DEARHRAEAANVAKSRFLAQMSHELRTPLNAILGFSEVMKSEIFGAHAVA
VYKDYSADIHNSGVHLLNLINEILDLSRIEAGRYELNEEAVSLVHVVADC
HHLLKLRASSRGITIHEVFEQGMPRIWGDERAARQIVLNLLSNAIKFTPQ
GGEIWLKVGWTASGGQYLSVKDTGSGIAEDEIPIVLASFGQGSNSIKSAE
QGAGLGLPIAKSLIDMHGGTFTLKSKLRIGTEVIVTFPPERVMSALAPMA
DEAPPLQPSYDISLSDENRRVRNKPIMSAGTGL
>RPC_1124 two component transcriptional regulator, winged helix family
MFVVIDDRKGVIQGYADGFDREGIVSIGFSSTDFRDWLEGALGNDLGAIG
AFLLGDCADRISLPPSIRNRCRAPIIALNGLKHLKSTIELFEAGVDDVVN
APVHVREILARTAVIRRRTIGPAEQTPTSVIRVFLDGRDPEIGGRTLALP
RRELRILEHLVSHQGKWLTKNQMFNAIYGLFDASFDENVIESHVSKLRKK
LRGHLGYDPIESKRYMGYRLDDLKSRANGESDPSRHS
>RPC_4609 MCP methyltransferase, CheR-type
MTRADGEPSVAISQQDVRRLCEFLYRRTGMSFADNKRYYIDRRLAQRIAA
TGCGSFAAYFAMLRADAEHEIEHLVNSFTVNETYFDREEHQLRCMTQSLL
GELLTRKGPDEALRIWSVPCSTGEEPYSIAIWLMEHWREVDKYNIEIVGS
DIDTRALQQAEQGIYGERALMRLSRDVVARYFKPLAAGQHQIDPGLRESI
RFTRANLVDAADMAQYRDFDIVFCRNVLIYFDDASRRIAAENLYDCLRPG
GFICLGHSETMSRISPLFRIRRFPDAIIYQKPEADHDEQR
>RPC_0560 PAS/PAC sensor hybrid histidine kinase
MVSHRGPRTPGRDALELSGLIARTVGLIIERHHATSALREREHELTRVQA
IAKIGGVVVDLRYGLHNERRSPEYSTIHGLPPDAPDGHEDWVRRLHPDDR
DRALRTLLDAIAGTADHYSSEYRIIRPNDGQIRWIAAEAQIERSPDGRAE
RLVGAHIDITDRTLAKETLRESEQRFRLIANSAPVPMWVSRLDGKRAFAN
QAYLDFLGLDYDAALAFDWRTVLHPDDLPRILQEQIAGETSLQPFVLEAR
YRRADGPWRWMRSESQPRWDAAGKHIGFIGVAHDITASKEAETELRRLNE
TLEQRIKQRTAQLQANEAQMRAMFETTNQYQGLLDLKGNIVYINATALAG
IRSTVDAVLGIRFWDSPWFTGTEGMRDCVRGAFAAAKKGETVRTEMLLHL
PIGDRFFDFAMRPIFDEHGRVSAVLPEAVDITERRHSEEALRQSQKMEAV
GQLTGGVAHDFNNLLTIIRSATDFLRRRDLPEERRRRYIDAISETVDRAS
TLTGQLLAFARRQPLTPQVFNIGSQVESIAQLIRPLVGSRIQIAVHLGCP
DCFAMADVAQFETALVNLAVNGRDAMNGEGCLTFDVVKVEALPPLRSHPG
RRGSFIAVAVTDTGSGIAPERLEAIFEPFYTTKEVGKGTGLGLSQAFGFA
KQSGGEIEVTSTLGHGSTFTIYLPQAESPAELADVVAVGAEVTASGRGHR
VLVVEDNEDVGRFSTELLRDLGYDIRWVGNANEALAAISEDEFAFDLVFS
DVIMPGMNGVELATLIRERYPGLPVVLTSGYSTVLAENAHHGFELIQKPY
SVELLSRTLRRAIADRRTALA
>RPC_2577 signal transduction histidine kinase, nitrogen specific, NtrB
MSSAAESRRTAHTDGDAILNALPNPVMLVAPDGKIVDANMAAESFFEIST
QLLRRQSLTELVPFGSPLLALIDQVRESGSPVNEYKVDLGTPRIGADRQV
DLHVAPFAERPGHIVVMLQERTIADKMDRQLTHRSAARSVIALAAMLAHE
IKNPLSGIRGAAQLLEQAASSEDRMLTRLICDEADRIVTLVDRMEVFGDE
RPVARGPVNIHSVLDHVKRLAQSGFARNIKFSEDYDPSLPPVLANQDQLI
QVFLNLVKNAAEAVVDLGTDGEIQLTTAFRPGVRLSVPGKKSRVSLPLEF
CVKDNGPGVPEDLLPNLFDPFVTTKPSGSGLGLALVAKIVGDHGGIIECE
SQPRKTTFRVLLPMFNTAKNYNQGLGDDAPASSRAAQDAR
>RPC_1845 periplasmic sensor signal transduction histidine kinase
MTAFSKLIRTTAFRLTLVYLFLFALFAASLLAYFAWNTHRLITDQITTTV
NGEMEEISDIFSRRGLRGLVFTIENRALRPGANLYLITTPNGQAVAGNVG
QLAPGVMATTGWAETFYRRLDDSDAPHHRALVRVAELSGGFRLLIGRDLE
ERRRLFGVVRSAAQWSVLIVVVLGLGGGIFVARRVLRRIDAMTGTTQRIM
AGDLSGRLPVGRSGDELDRLAENLNAMLERIEALMMGLKEVSDNIAHDLK
TPLTRLRNRAEEALAKSHNEAEYRTALERTIEESDALIRTFNALLMIARA
ESGQARGDMADFDAAEIAKGIHELYEPLAEDNGLSLKVETTPAPLHGNRE
LISQALANLVENAIKYGRPQAEAQPLGADAAPSSGEILIEARRDGDQVLL
GVIDGGPGIPTSDRKHAVQRFVRLEASRTQPGSGLGLSLAAAVATLHGGE
LRLSDADPGLRATLAIPARAGDGLAVPTQNPEQTTA
>RPC_2580 two component, sigma54 specific, transcriptional regulator, Fis family
MANDILIVDDEADIRDLVAGILEDEGFTTRTARDSDSALAEVSNRRPNLV
FLDIWLQGSKLDGLQLLEQIKREHADVPVVMISGHGNIETAVAAIKRGAY
DFIEKPFKSDRLILVATRALETSRLKREVKELKQQAPIASTLMGHSACMN
QLRQTIERAAKANSRILIVGPSGAGKELAARTLHNASGRSEGPFVVINAA
AITPERMEVELFGVEQSNGEQPRKAGALEEAHGGTLFIDEIGDMPRETQN
KILRVLVDQTFQRAGGTIKVNVDVRIVSSTARNLEEEIAEGRFREDLYHR
LSVVPIRVPPLSERREDIPELIEYFMDQISLATGLPKRQIGADAMAVLQS
HVWPGNVRQLRNNVERVMILAGGGPEVIITADMLPQDVGSMVPTMPTGTN
GEHIMGLPLREAREVFERDYLIAQISRFSGNISRTAEFVGMERSALHRKL
KALGVG
>RPC_2872 signal transduction histidine kinase
MTTPAPTLLYIDDDDALGRLVTRGLQRQGYCVVHASSGEAGLARLRQGGI
DVVALDQYMPGLDGLETLEQIQNIPNPPPVVFVTASQDSSIAVTALKAGA
ADYLMKDTLGDFVPLLHVATEQALKQARIRKARDDAVAEVHASRDRYAAL
AAEREVLLREVNHRVGNSLQIIASLLHLQASSSKQADVKAALTNAMGRVA
AVAQVHRRLYTSHDLKSVLLNQYLEALLEDLRRSAEGNRMSRLTLKSEAV
EIDPDRAVAIGIIVNELVMNAVKYAYPDGAGPIHVELHAAGDALELSITD
DGVGLNVKVNPDSTGMGQRIVNAMASKLEAAVERDPNHSGTRIVLRFRPT
SAPAASLASATH
>RPC_1385 periplasmic sensor signal transduction histidine kinase
MTTLDSGFTLIRTATRRVAAFHDYVWRRFNDFMPKGLYARALLIMIVPMV
VLQSVVAFVFMERHWNTVTQRLSAAVVQDIAALIDVYKGYPQDKDRAQLR
RIAQQRMGLVVDFLGPGDMPPPGPKPFFSLLDQSISKQISRQIARPFWID
TVGRSNLVEIRIQLDDAVMRVFAQRSAAYASNSEIFLFWMVGTSSILLIV
AVLFLRNQIRPILRLADAAESFGKGREVPNFRPRGAREVRRAAHAFIEMK
SRVERSIEQRTAMLAGVSHDLRTILTRFKLELALIGDGPDADGMRKDVDE
MAGMLEAYLAFARGDSGEQAQPVDMAAALEELRGDAERNGHSATVVFHGQ
PVVTVKPAAFKRCLGNLVSNAARHADGIAITGHRDHRYLSVTVDDDGPGI
PQDMREEVFKPFLRLDDARNQDEGGTGLGLAIARDIARSHGGDITLGDSP
MGGLRAIVRIPV
>RPC_1211 response regulator receiver (CheY-like) and ANTAR domain protein
MESPLKIVIVDESPVRAAILKDGLREAGVSQVIHLEATTNLLARVYEIDP
DVILIDLENPSRDMLEQMFQVSRIVKRPIAMFVDQSDTASIQASVDAGVS
AYIVDGLKKERMKHILDLCISRFNAFSKLQNELDRAKTALDDRKVIDRAK
GILMKAKSLTEEQAYVMLRSAAMNEKKKIAEIAQSVITASEMLK
>RPC_0766 diguanylate cyclase (GGDEF domain)
MELSTALRWRRRAFRWQLSAKLLVISLVVTVLAFSAVCGSVLLDMRRNTE
ELARQTMENLSATIDADVSRNVEFYDKSLQAVVKNLALPELADVSKPILQ
LILFDRATTAPHFGAIQVFDAAGNLSLDASTLKPPPERRDDEEFFKVHRD
NPDVGLFISRPMLYQGGYSIVLSRRLATPSGGFNGIVVGTIRLGYFHDLF
RRLRIGEQDVVSILTHNGVIIMRRPFDLDVVGKDVSNIAGVIKTLGQRSG
WFSGVGLDDGTPRMYVWSDSSHPLVVLVGKPWRNVLSLWRKEAIRLGAIL
LVLASFVAGVTIFLIREIDRRARAEQRLEELSVTDPLTGLTNRRKFDAAI
ETEWQRAQRQQTPVALLMIDADHFKGYNDSFGHQAGDQMLIGIAVCIADS
VHRAGDCAARFGGEEFAVLLPGLSAYAALSVAETIRGKVEQWSIDQTGVT
ISVGTASITPGPATPWSVLVEAADKALYAAKASGRNRSVVASSTRELSLV
A
>RPC_4050 UspA
MLNDILVHLPVDRPAESLIDCAISVAKLFDAHLDGIACAYQPINPAIVVG
ASAAYFADATQYNTDLDLAAQRLDQFEIAVRSSGLLHGGRTLCDSPALAN
QTLSEISRLYDLSIVAQADRARPSHHDALPEAVLFNSGQPMLLMPYIHTG
PLKLDRVLICWDGSRPAARAVRDATPFLHKAAQIEIVAINEDDDVPEELS
SDALVAHLARHDLAASANKFACEPANIHSAILSLAADTSADLLVMGGYGH
SRIREFVLGGVTRGMFKSLTVPALMSH
>RPC_0052 adenylate/guanylate cyclase
MDIRTTPNQPVVHSDSSAQFAALKQAADPAVAAAIERLVAEGCDRDLNRI
NVLDFSARRELDEERVISGFLQASRLGLFDLSWNVLCPGCGGVLDAHNTL
KSLRPDEYHCGLCASDYEASVDKQVEVAFTVAPRVRRIAAHDPGTMPIWE
YFRQMFWSSGVDFNEQGFASLTGEVTLDAVELPIGRSVTRTLQLPPEFII
VFEPVTHAAQFIDVQGEPTDEAQQLSLVYHKLPAPTKTVTLRPGPLQLSL
DNRTDTRVLPSVFIAADALHHLLGQRKPFLTAKRILSNQTFRDVFKADNL
TIDQRLKITSLSFLFTDLKGSTALYERVGDLAAFDLVRAHFRALLEIISS
EKGAVVKTIGDAVMATFVAPEQALAAGLRMRAAMDALNAERGSNDLVVKI
GIHEGPCLAVMLNERQDYFGQTVNIASRVQGLATSQAIHITGTVIAAPAV
AALLRRAAITPIQKQAALRGIADQVVVYEIP
>RPC_4248 conserved hypothetical protein
MSGTPISAPVSVPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDSP
KQEDREFALDLIRKSARTASARLQFCRLAFGAAGSAGAQIDLGDAQNMAR
GHLEDDKTKIEWNLPRILLPKNKVKLLLNMLVIAQQTIPRGGVLTVEAVG
EGDAMGFRVAASGLNARTQTNIVDMLSGAHAGSIDAHAVQPYYTRLLAQA
CGFSVSLAPAGEAVVVTAS
>RPC_3780 multi-sensor signal transduction histidine kinase
MSAPHDPPTPDNLLDAYGDRSALELTECDREPIHIPGKIQPHGMLLAFVE
PELRPVSVSVNVEAFTGQSPEAVLSQSIAALMTAPSFERLTAVLASPDLA
AFNPIRIELLTSKGVRVCNGIMHRHDGLTILELEPRPAGAEPPAEFFRSV
RAAIRRLQTASDLLTVCNIAAREVRRLTGFDRVKIYRFDKDWNGQVVAED
RSDSIPSFLDFHFPASDIPAQSRALYTSNLIRIIPDIGYRPAPLIPDFNP
VTGGPIDLSFAVLRSVSPIHVEYMVNMAVYGAMSVSIVRDGRLWGMISCH
NTLPRFVSYEVRQACELIAQVLTWQISVSEEAEVVGHSVRVRAMQNRMLH
ELGDEQDLKKWLIRSGQDMLDLMRASGFALCGFDGITTFGSSPSNDQVLE
LAAWLARRESRDVYETEHLSAKNPNATHYPHLASGVLAVPLGRVSSTLML
WFRPEQAQTVTWGGDPHKPVRIGPHGGRLQTRASFDAWREEVRGRSKPWQ
TYEIAAAVEIRDLVVDVILGRADALEHANRELSRSNDELESFAYVAAHDL
KEPLRHIEAFAGLLKDALSVDAKARLSTMVDGIEASSRRLRALINDLAEY
SRVGRDARPLVPVALDDVLAEVLADLKPVLHDSGAILSSDSLPVVMCDRS
QIRQLLQNLISNALKYSDASRPPRITLRATEQPGPASGFGSAGGERQRHV
AIAVGDNGIGFDPKYAEQIFEPFQRLHGADEYEGTGIGLAICRKLAQRHG
GKITARSEPGVGSTFTFTLPLRNLDELEQ
>RPC_4031 signal transduction histidine kinase
MVRLGFIIGLAAIIGVLLSGLAAYRVHQQELAIDRIALARAIDVHASLVQ
DRLTERELLGRVASGLFRTPSIVKADMLEPLRNSIYAFKTDFVVASWVAR
LQPTEFEAAQQVLRRAGFPNARIRNFNDQPLNATQLGKPLEVLMDIEPRN
AETTGFLGRSLTEHPVLGPIFARAAAKGTPVASDPTELLHVGGPIGLVLV
APVLQQGSDVPVGFVTFSYELGPLMLANDDNSLFSVVLMDPRNANTELVA
DDRGDVTVRTVARDGTAPTPSAQRTERFGGRDWSLAYYAKKNSFARAQQM
AAMVAAIGIALTGIVCGLFGYVAYSNLRLRREIEVRIGFERRLTAVIDEL
NHRVKNILAVIQSIVTRTLRHGSDVDVARELLIGRIHAMSNVVSLLTESQ
WQGVKLRGLLEARAIPHSERIAANGPDIMVSARAAQSLSLLFFELASHTD
EGLSLVGKHPNVVAQWEVGGSGAEATFYFRWEEFNTSAATRREDSDFGTI
LLDRVAPEALGGTAKRYFTDVSYVYEITAPLETVVDMTERDRTEQISAPL
NAARTSR
>RPC_1904 two component transcriptional regulator, LuxR family
MTTVLIIDDHPIVLQGCARILEANGPTKVLTAVSMVDGFRLYRQHDPDVI
IVDLTMHTGLLSGLSFIRRMRVVNRRIPILVLSMHRDPVIVSRALQAGAS
GYVLKDSAAEDLLKAIKRVSDGRPFISDELAADIVLMETRGQKHRLQTMT
LRELELLSILAEGKPYGLIAEELNVSYKTVANSVALIKNKLGVRTLPELM
RIAIDQLPSIETTAAPRR
>RPC_1779 multi-sensor signal transduction histidine kinase
MTVSTIIRDCLDTLLHPSARYDALISARHRAFIAPRLFGSLAALAAFPVY
LAIHGAPAGLEVAAFAWLIAPILLSYFLSRTGRYESANILSALAMAGLIM
AVAINTGGIESFAAIWLVVIPLEAALSASRRVVAFASALALGCAAALIAL
NHFEALPVSQASASHGTMMAIGIASALLYACGLAYGTESLARTSVALLYD
EEDRYRLLARNMSDVISRHARNGAVLFVSPAAEPLLGVPVSRLLGHGLFD
RVHVADRPAFLTALSDAGRGGEARSVEFRIRRDVPRGDRGRCNTADFIWL
EMRCRPLEPSAKNATSEAEVVAVMRDVTDRKEQEQALELARAAAERADAS
RSHFLATMSHELRTPLNAIIGFSEMIVQEDVLMISAARRKEYAQLINDSG
QHLLSVVNGILDMSKMESGKFEILPEPFAPRPALLNCCNLLALKARENEV
DLVTRAPENLPQLTGDPRAFKQIVLNLVSNAIKFTERGGTVTVSAAVEGA
RLALRVSDTGVGIGADDLKRIGEAFFQASKSYHRRHEGTGLGLSIVKSLV
ALHGGEMSVESKLDEGTTVTVMLPLAFTRPQDKTNIAVLSPAPQMAAQNE
SQPQDRQVKKSA
>RPC_4546 two component transcriptional regulator, winged helix family
MSGVPIKVLVIDDEPPIRKLLRMGLGTQGYDILEASNGKLALELLAQQPA
LIILDLGLPDIQGHELLRIIRARDAHVPVVVLSSRGDEAGKVQALDLGAD
DYLTKPFGMEELLARMRAALRHQLQVQGERPVFHAGSLSVDLVRRLVKVG
EKDIKLSPKEYDLLRVLVQHAGKVLTHRFLLKELWNELTDAQYLRVYVRQ
LRQKIEPDPERPQFLLTETGIGYRLRAPD
>RPC_3525 diguanylate cyclase (GGDEF domain)
MFASRLLGIIITLQLALTTVFHFLGKQHGVRDIVQMQHRADLQALALELE
IKATTDPLTGLFNRGKFDVVLGYELARAERYGNPLSLIVYDIDHFKEVND
AYGHQAGDRVLVQLSAIVSAAIRQTDLLVRWGGEEFVLVLPDTDGATARL
VAEKLRQAIEQSGFDLAGTITCSFGVSIYVEGDSVDSLVARTDNALYRAK
MNGRNRVEYASARMMSPSIAPSLEPRA
>RPC_1221 periplasmic sensor hybrid histidine kinase
MWAFLQGLLDTSTFSPHGICLLWEPGLIWLHVVSDAAIALAYFSIPFALS
YFVAKRPDVEFGWVFWAFSIFILACGFTHIFAIVTLWIPIYELEGIIKAL
TAIASLVTAAMLWPLLPKLLAVPSPSQLREAQHALHMETLQRREAEDMLR
QSQKMEAVGQLTGGVAHDFNNLLTIIIGNLEIAQRDLGKLRDGVDGRLRR
LIGGAMSGAQRAATLTSRLLAFARRQPLDPKACNLDQLLKGMAGFFRSTL
GETIDLEYVGTAGLWQAEIDASHFETAMLNLVVNARDAMPDGGKLTIETS
NVFLDEDYARRHAEVAAGQYVQVAVTDTGVGMTADIVARAFEPFFTTKDV
GQGTGLGLSQVYGFVKQSNGHIKIYSEVGQGTTIKLYLPRLHATSAAEQG
PDDIQVGAARAEQILVVEDDPEVRDYVVEVLEDLDYRVFQAADAGAALGI
IGKLDGGLDLLLTDVVLPGMNGRELADQLRQQRPDLKVLFMTGYSRNAIV
HQGRLDVGVDLIQKPLSQAALAAKIRSILDRV
>RPC_2736 periplasmic sensor signal transduction histidine kinase
MKRYRLSRQIIVSMSVVATIAMLIVFVGSFIFYGIYLSYFPPPPGPIPLL
PEASDVVMIAFFLLIGLALAIVVALRLAKRILAPLNSLAESARKIAAGDL
SARAFPGDRSLGETAQLVDDFNSMAQRLQDIAEDMTAWNATIAHELRTPL
TVLKGRLQGIADGVFSPDEALIRNLLLQVDGLSRLVEDLRTVTLADGGHL
DLRIEEIGLAAEIRSVAELLEPSLVKAGFSLDVTLVDVVVRGDGIRIRQA
LLALLDNAQRYARPGAIELTTLKSGNSAVIRVEDEGPGLSPAFARRAFEP
FARSEPSRSRRLSGSGLGLSVVRAIAEAHGGRAAYRRSSRGGAVFEIELP
LMQDHGPDAAPDAATSPS
>RPC_0096 periplasmic sensor signal transduction histidine kinase
MDPVTQQTEQASAPQPKPLSGVVRLVRAVPIRWRILSIAALNSAVALVLA
GLIWSGFQGLGSAWDDVRQVRESDKILALLESETGRLQNLIHRYINQPSP
ELFAEILLLREAVLGTLTSRASTDPMLSGSVDELERVTERFLNGFGDLRA
LQTTITKTYQEQVMAPAKDMAGLYSIIEGATGRREAAIWPPLGRSREAFT
SLLVAANSYYLSLSTASAEQARANTETIERTIPVMIEFADNDLQRMALER
LKIRTEALRDGLGQLSAQLVSRTDLLRNSIDASQAATIGAIDGLSVKMRQ
REQKAQETFDRTLRDISREVLWIAVIFLGIIIVAGVVIALSIRRPLQQLM
RAMQAIASGDYDRRVAGTSARDEVGAMARAVEVFRENAIDKRKAEDELRA
SKEKAEGALLELNAAQRNLIDAERLAALGGLVAGVAHEVNNPIGISLTVA
SSFVRKAGQFEAELHSATPLRRSQLDEFVRTSKDAAQQLMANLQRAAELI
QSFKQVAVDRSHAERRQFNLNEATNQIVASLRPVLKRAPITLSLDVPEGL
LIDGYPGSYGQILTNLFLNAVNHAFPAGCAGGISISARPRGVDDIEIIFA
DTGIGMTPEVQRQAFDPFFTTRRNEGGTGLGLHIVYNLVTQQLGGRMMLE
SRPGQGTIFRIIMPRAATGGAVHAETDSDGTPPWPSRTMSSN
>RPC_3756 PAS/PAC sensor signal transduction histidine kinase
MPIDRVAVGPEDLIAKVGDRAPHGLDGEREAVWIEVIRKMDEVYADLLRY
ETDLEQKNAALEEAQAFISSVIESVSDILIACGRDGSILQVNPAAVHLLG
RPAEALTRRPLVELIDAPDRLRVDALLKAGLSSDVMTFEIRFVTAAGISD
LYAVNGATRYDPSGARVGTVLTGRPIGELRRAYEALHAAHSELQRAQRQL
VEQEKMASLGRLVAGVAHELNNPISFVYGNIHTLERYRQRLGRYLGAIHG
GADAAEIDRLRHELRIDALLDDSGSLIEGTLEGAMRVSDIVKNLRRLSFL
KAGEAQPVDIERVIRTAARWASRAKAGRAEIFFDIEKDLSIVGNEGQFHQ
IIVNLVDNALDAVRGEPEPLIEISARRRGPEAVIAIADNGPGLAEGLIDK
IFEPFFTTKPVGEGTGLGLWISYGIAREYGGALAAANRCGGGAVFTLTLP
AG
>RPC_4515 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
MFGFNSKRVKHALAEVEALDRLQAVIEFDLDGTILNANENLLKMSGYTLA
EIKGKHHSIFVSPAERESARYRDFWKSLNRGEFQTTQYKRFGKDGKEVWV
HASYAPLRDETGKVVSFIKFATDITAYKLRTMEDAGKIAAINRAQAVIEF
EMDGTVITANENFLGVMGYSLAEIQGKHHSMFVTVEDRASAGYAEFWARL
NRGEFMAAEYKRIAKGGGEIWILATYNPILDETGKPLKVVKFATDVTAQK
MKAADSDGQLAAIQKSQAVIEFNMDGTIRTANQNFLNAMGYSLAEIKGQH
HSMFVELRDKNSAAYRQFWEALNRGEYQAAEYKRIAKGGREIWIQASYNP
ILDLNGKPYKVVKYATDITAQAIGRKKADNARGLIEAVAAGSEQMSASIR
EISETMAKSRETSKGATARVDAADGQAQRLNAAAQAMSGIVEMIAGITSQ
INLLALNATIESARAGESGRGFAVVASEVKNLAGQAKQATDTITAEIEAL
NAVSSGVASSLTAIKAAIADVNEFIASTAAAVEEQSAVTADMSANMQRAS
AELA
>RPC_0895 diguanylate phosphodiesterase (EAL domain)
MIRISTIFIAICMVLVSASLGMVLYSMARFSFGESALVAMTTLTFLVLYN
AVAMRLRDRSDVSGQVADLSRGIGDLARQVAEFGRRLSALEGRAPGAAAG
HGPDQTQIVRDEISELGAMVKQLANTVASHEDLLAAASAPAAPVARRMEA
PPIVVPPRDGEPVSVQIAPTVIAAPVGEPAALQPPPLRSEAQLAIAVRNA
IEANRVDIYLQPIVSLPQRKVRFYEAVTRLRDDSDKVLTADEFIPAAESA
QLMGKIDHALLLRCMQVLRRLMVRNKEVGVFCNIAASTLANADTFGQCLE
FLEANRALAGSFIIEFKQDAFRNLGPMEIEHVAALAQRGYRFSIDHVTDL
RFDPRDMADRGVRFIKVPAALMLQNEAPSANIHPADLCDLLGRFGIDLIA
ERIEGERAVVDLLDFDVRFGQGFLFAAPRPLRPDAATNGHAAVAPNHDQR
ASHDSTKASRTEIGRIDPKRVTGNAALVRRSASPN
>RPC_0655 two component transcriptional regulator, winged helix family
MRNEGALQSSDVVIAIVDDEPLIQSTLVSYFQNAGFAVRSAETADQLRRL
MARERIDFILLDIRLPDGDGLTLMRDIRADSDVPVILITSRAEEADRIIG
LELGADDYVTKPFSPREVLARVKTVLRRTRAVADPGRGKRLRRFAGWCLD
LENHRLTSASGEPMRLTSAEFELLAALVRHPGRIMSRNDLLDVMSSREWD
SNDRTVDVLVGRLRRKIEADPGKPQIIVTEYGLGYVFAEKVA
>RPC_2156 diguanylate cyclase (GGDEF domain)
MVPFQWNALFETGNARIDRQHRTLFELTNDLARAVQNGEKLPEISALVLK
LRDYAATHFCDEEQLMRCSALAIQEKTRHACAHRSFIKKVEDLAARRDLS
NVEAVSEFLQFLVTWLVTHILKLDHRMTKALLRQPALDADKRITVEQVLI
SALMETERRFRVISDEAPTLIWICGIDGVRDFANKAWFDLVGATPSADAP
IDWTSYLHPDDKDRYLALIAGLMVSPLQAEAEFRVRTASGSWRWILEKIT
PRMDGERSIGLIASGIDVTDVKLSEGLLSEANSRVEQQVEERTREFQRLA
HADPLTGIANRRLLIERLDGEVARAAKAGGELSVLYVDIDHFKSINDNFG
HAAGDRVLVQLAATMKSLLRQTDLVGRMGGEEFVVLLLNTDQAAALRVAD
QLREAISRCEFELITRPVTISVGVAGYEAAEDAASLLARADHALLQAKRC
GRNQCRLAPAQGDALISLSA
>RPC_0828 multi-sensor signal transduction histidine kinase
MPRGLPGLPHSLRGKLLLLSLIVVSVPIMTAGYFLDRQGQQTLLQEKEER
LFGLDRLLDAQLGSGFDALLADYDGDRADGAAMVRHLNARLATVTDQMAA
ANPGVGVGYYDLERNAIVTYGPSAQYGATVGRPIPPDHPGWAVMRSGKPA
MEAGPQVRGLILNAMWPIVRNDRVQGYVWANQLSDDVDHQTAAMDRAILA
VTIAGVVLGILLTQAMSRGLTRDVRLVTDGLARLRTDLHHSIPPLAGEIG
EIAAKINVMAQSLLDAKSLTEDIVQSIADGVIAIDRDGRITAINPAARHM
VGVAEAEAIGRPYNSLFDPAAPFSSVLLDTLEHGCEHVDVAVEMPLPRQM
LDVSASSSLLRDSHGTAIGAVVVLKDRTEQSRLRTQVMRADRLAALGELM
AGVAHEIRNPLTSIRGFVQFLEACDDVREWRRYSPEIIRQVDSLNRIITE
LLEFGRPRPPAIRPVQLNDLVHEVTRLAGHKANVQLRLALCAELPLIEAD
GEALKQALLNLLINAMQAVETLGTVRIETHVEADGATVAVAISDDGAGIL
PEDLEKIFDPFFSTKPQGTGLGLAMVHRIVDAHHGTVAMTSRPGAGTVAT
MRLPRLHIKKDEV
>RPC_4889 PAS/PAC sensor hybrid histidine kinase
MASSDTAFLRGGGETGALIAGFDWQSTSLGAITDWPQSLKTAAGLVVHST
VPMVMLWGPDGFMIYNDAYSAFAGARHPALLGSKVREGWPEVADFNDNVM
RIGLSGRSLAYRDQKLTLYRNGVPEPVWMNLDYSPVLDESGRPAGVIAIV
VETTKRVLADQRVAAEQDRLLSMFEQAPGFMAMVEGPEHVFTLANQAYLQ
LIGHRDVIGRPLREALPEVEGQGFSEIMDDCYRTGQPFVGTAWKVSLQRV
AGGAVEDRFVDFVYQPVRDGAGDVTGIFVQGSDVTQRVAGDAELRRITET
LEARVGERTAELAAANRQLVAQIEERERVEATLRQMQRLEAVGQLTSGVA
HDFNNLLTVVLGNLGFLEKTLDRAGVDAKAHARLANIRTAAERGATLTAQ
LLAFSRRQRLETRAVDLNETVTKMRALLQSSMGGSVRLETVLQPDLWQAL
VDPTQIELVILNLAINARDAMQVGGSLTVETANVRLGAPTRPEMPAAGEY
VMIAVADTGTGMTPEVLAKAFEPFFTTKPVGKGSGLGLAQVFGFAKQSGG
GVRIDTRIDEGTTVKVFLPRAARSAAAQPSDLREAMPLRGPVRRLLLVDD
DSAVRDVTAAMLREIGCVVIEAGSGGAALDILERDPAPFDLMVIDFAMPG
MTGAEVAREAQLRRPGMPMIFITGYADLAALQNIGEDAIVQKPFRDDELL
RKIGRALGGGATGNVVQMRK
>RPC_3942 PAS/PAC sensor signal transduction histidine kinase
MTSAEFQVRGVDDPRLAIHATSSLPAWLWAIDGTRIVWANPVGARLFGAP
NGAALGTKSFGLADPHRRQVAQLAGRLPPSGATRLERLRGFGAPLGALVT
CGCARLEFADGSHGVLVVAAEPIGRAMPLVERLQRLVEGIETPIATFARD
GLFIGASDAARALLGFRNLAEAGLETARHDALTLGRAEMPIGIGRMVLQR
VGAGADVGLVALLVPGATEQAAQPRSHPSAADEAQQVSQPDAPQHPDLAK
EPPPEPSQPAEPTEAAAEPAEPPPSVGSEATADLAADPLSDHEAPATTPE
APAEFSPLDDAAAPAEPSPAAPSADLISAETPAEPALSWNDAAPVEASAE
PVDAALDPAATDDLAAEHAKPATPSPEPPAAAPTATADADVALPWFAEPL
PPRRHPLRFTWQLDAEGRFSIVSDEFSRLIGPRTAAGFGRLWHEIAALFG
LDPDRHFAAAIATRNTFSGIMLNWPVDGPDQRLAVEMSGLPVQDRDGNFR
GYRGFGVCRDLAGLNRLADARRNDDDTLPAQPLSAGIAPVDASFAAASVS
ASEPNGTDLSDQPSPADMSSPTDPEPAVDTPKNVLPFRQTNDPRSPALTP
VENNAFNELARQLSARLESEAPDLIAEPAASQPDAPSRPDPTAPDSREPE
SREPQAAQSETAGEPSEPSAAAPATQPARGEALRDTLLLELLPVGVLIYR
LDRLLYANRAFLERTGFASVAALDDAGGLDVLYVESGADGSSSNSDDGAP
ITITAAQRAADQPSSQPAEGRLFTISWDGEPALALIFSETAAETAMAAEA
EPFAEAPAIDPDLPSAVGAANAEELGAILDTTAEGIVMFDAEGQLHVCNR
SAEALFGYPGDNLVQRNLIELFAPESQRVLLDYIEAIKSDGAASLLDPGR
EVLGRVREGGLIPLSAIIGRTRHDGPNYFAVFRDLSQAKKTESELIQARR
QAERAANAKADVLARLSHEIRTPLNAILGFTEVMIEERFGALGNERYVEY
MKDIRASGERVIAIVSDLLDLSRIETGKLELAFAPQHLNELVEQCVGVMQ
PQANRERIIIRTSLAHQLPNVVADAQALRQITLNLIGTSIHLANAGGQVI
VSTALSDFGDVMLRVRDTGSRLNEHELAAAMEPFRTAPPSDHSSEAPGVS
LSLTKALVEANRAQFHIKTAPHSGTLIEVIFSDAMQKA
>RPC_4677 response regulator receiver domain protein (CheY-like)
MATILTVDDSPSIRQMIKVALAPLGHNVIEAGDGAQGLEKAKASRPHLVI
TDLNMPVMNGMELIKALRATPALTGLPIVFLTTESNDAVKQEAKKAGATG
WITKPFSQDQLQAVVNKLVRS
>RPC_0821 transcriptional modulator of MazE/toxin, MazF
MRRGDIWTVAGGKDYAGKARPVVILQDDSFDGTESITICAFTTDDTDAPL
FRLRVEPSERNGLRVACHLMADKVTTVPKSKVGVHVGRLDDEDILRLNRA
VLVFLGLATSPKNK
>RPC_1464 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MRQAVHPRSRPAILTDAAAASRDDAVDMSSQSFSADARPRRYLVTVAAAV
IGTLISLAAFVAISKWEQRIADLKLHEIAGNYLQVLNSDLERATEVLYPL
RAYFDNSDDVSRREFQAFSKDLRKRLNGLRNTGWAPRVGRAQRQRFEQWV
RDHGFPGFEIWQRDADGHRVRAPQRDEYFPVLYAENQSQQVLGFDMASPP
ARAAAIARAGATGEMAATPPIATLTKSEPGDFIVFMPVYRREAPRSETPR
IPQGYLCGIFETGPTIAGILGARPLPSGVDVYFFDPTETGAKRSILWHPS
RTRTAPAQQPDEAAMRAGLHASGIIRVADQQWGVLFAPAGEGAIAPSNAI
AIAIAVLIAGLLMTAAIVGYLLRSLQRTLRLEFLTESLRGATAELQRESA
KVARLASLDAMTGLANRVSFLAQLSTAFAAARQHDGRFAVVCLDLDHFKD
VNDTLGHPIGDRLLQIAARRLIGMLKAGDLIARLGGDEFAILLAEVCDRD
AIAAIAARLIEGLAERYDLDGNAAHVSASLGISIYGPATASAEAMMIEAD
LALYSAKSEGRNGYVFHCAALDSAVRERVRVNDELQAALRNGELTLHYQP
QVEVPSGRINGLEALVRWNHPSRGLLYPGAFIPVAETTGAIVGVGRWVLE
EACRQIKRWQAEGLTPPRVAVNISAAQFKGAVPLDRQLRDTLAQYDVAPE
LIEIELTEFALLESTKANSDTIRRVRELGISVAIDDFGTGYSSLEYLRTY
RVNRLKIPQQFMTEVAIESGDAAIVRAALVLARELGMDAIAEGVETPEQL
AFLLSAGCRNVQGYYFSRPIPAEALRPLLACGVIQRAPAPPVSKSARLVG
>RPC_2579 multi-sensor signal transduction histidine kinase
MTSADTAAPSSEPHKAEPRRRRLHKLLAPFAVALALLSAFLTFVVLTGLT
PITPTRQVVVTFLLINAATVLLLVMIIARELWQVVQARRRGRAAARLHVQ
IVSLFSVIAVLPAVLVSIVANVTIDRGLDRLFSGPTRAVIQNSLIVANAY
LHEHAQLIRGDIIGMANDVNHARPLFDQDRQSFRQVLTAGAASRNLPGAM
LIDKDRNILESAQTGIRQDFDTPAPEFLSNVDDTEPQIAVFIEANYVAAV
IRLSAFSDTFLYVARLLDPRVVAQLRQTQASVAEYAEIEASRLGFQVTLA
LLFTVIALTVLMSSVLIGLNFANWLVGPIRRLMGAANLVSTGDLDVQVPV
IKSEGDLAHLGETFNKMTQELRSQRDELVSASEVIDSRRRFIEAVLSSAS
AGIIGVDASGSIGILNRSAEKLIGHSESETLGHPLTEIIPELDEMMKTAR
ESAQRLLQGQVTINREGHERNLSVRISAEQTSHSQDSYIITLDDITELVS
AQRTSAWADVARRIAHEIKNPLTPIQLSAERIKRKFGKLIVEDKGIFEQC
TDTIIRQVDDIRRMVDEFSRFARMPKPVIEGEDVADTVRQAVFLMRVGHP
DIDIAAEIKDEPLRARFDRRLISQALTNIIKNATEAIEAVPPEELGKGRI
EVVAGREGEDIVIDVIDNGIGLPKTSRSRLLEPYVTTREKGTGLGLAIVG
RVLADHGGAIELNDASLLRPGQRGAWMRLRFSISGQPPQEQPGPPAISIP
GEPKIPVTSGN
>RPC_0493 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MLLQGSPCLLGIMPIRATSQSHALAQQSNSRSGSAPLDGGPEQAATLALS
VFMQMGQAAALIGDDGRLLLSNSVFDDLFGAEGAAGILDPFSSEATRKGS
KIDRQVSFPDGRTFGIEILPVQEGRLITAGDITDHLAERAREAEAARTDR
LTGLGNRLMFRERLSKILGEADLAGGAAMLVVDLGRFKALNESLGHKIGD
ALLGLVAKRIRSAVGAGDVVARLEADKFGIIQTGRPQAQSADALAIRLVD
LIGRSYLLDGQLINVAASIGVVLLSDGVDDADNVMKNADLALHRAKKDGH
GSYHFFESAMDERMQARRKLEIDLRRALALREFALVYQPQVNLKSNTVTG
FEALLRWQCPKRGAVSPLDFIPLAEETGVITPIGEWVLRTACCEAAKWPP
ELSVAVNVSAVQFADPNLVSTIISALADSRLDPRRLELEITESVMLDARG
TALAVLQTLRTMGVRVALDDFGTGYSSLGYLRSFPFDKIKIDQSFVRGTS
NDPAGQAIVRAVAALGHSLGMATVAEGVETAEQLARVAADGCTEVQGYFF
SRPIAPERIEGFLSTRNQGENLM
>RPC_3955 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MAGNNWQVGGVTKLAVSVVGCLVATAATSGAARAGFELAPTRYLGSFDAE
ILWELLIGGFVAVSFLASVAIWAMSSLRRISRAHHRRGLFVSSALNSLNQ
GVVMVDALGKVMFCNDRYLEIYGLRRSDIVPNMTGLELLELRRSRGMLDV
ATEEFYRTASGPNGHIADLPNGRSVLVKFSNLANGGSIATHDDCTPQREL
SRQLATAKQFLESVIDNIPVCVAAKAIEDGRYILANRAFERFCGLPRDRI
LGRRTAELFSAATAATIGEADRMAIDSPHDPLRGELTVDVGGGDRVIDNN
CVVACDDKNRPEFLIALFEDITERRSLSQELVNTKKFLELVVDNIPISLT
VQSTQDGRYLFANRGAEAILNRCREDAVGLSALDIFNPKEAKLIAERDAN
AIRRRDLMTEEHPISTKDGLRLFLTRRVTVVDGEGAPQYLIKTHEDITDR
RQTEAQMAHMAYHDGLTDLPNRLAFLQALAQMIEACRDTTEEFAVLSVDL
DGLKEINDVFGHAVGDKLLVEVARCIQLSSRGGVVSRLSGDEFGLIIDGP
QPAAAMHLAAEVAKAVAGGFLIDGKQVRIGVTTGVAVFPANGADAASLLA
NAGAALFRAKARMRGSVSLYEPEMDRQIRDRRILHQDLSAAIKNGEMSLH
YQPQANGCTRIGGDDFVGFEALARWFHPTRGFVPPSDFIPLAEESGLIVE
MGEWILREACREAASWSKPLQIAVNLSPAQFLNSDLVSAVHTILLETGLK
PSRLELEITEGVLIEDFDRGLSLLRRLTALGVRISMDDFGSGYSSLTYLQ
AFPFDKIKIDRAFVMNLGHNPQSAAIVRAVIGLGHGLGVSIVAEGVETQQ
QLDFLVAEGCDAVQGYFIGKPAPIEQYSRLVGLTGPRLATSRAVG
>RPC_3360 diguanylate cyclase (GGDEF domain)
MSIFHAQPEAALRHAEAPASEHGHALDPALEKDRRSPRGHGHEYWLFTIT
VLNLSPLLIDWIVLRQHFSLALLLRLGVVAPIGIFGLWLCHFTTHTRLQA
WATAAATLALSLVATALGQYAAEPYATRYMMAAQFLIFGAAVFTALPWRL
TKLMTLIAVAGFALIVSSGLRWPPLDGNLDLVVFCLTTTAIALYLRRRKD
LQLAEIINLRKLDSSHASELRDANHKLSLLSHTDPLTGVFNRRYLDRLVD
QLAISIAPNAGYGLLMIDVDHFKFLNDRCGHLHGDQCLRLIATAIQRSLR
SSDDAVIRYGGEEFAVVLPDADLFETMQVAEGLRAAIGALRIPNPGLGPE
AFVSVSIGAYSATTAEDVTDSLRCADQALYCAKQAGRDRVFV
>RPC_4408 signal transduction histidine kinase
MLEQPFEKTADFPIFLQSEAVRDQLQYRLRQQSLLGEFGRFALQTRGVPQ
ILQRAAECCAEGLQARFAKVLEFLPDQNRLLCRADVGWAPEQIDSASLGT
AVGSPAGYAYQTGESVISNHLPDDLRFHTPQSLVDHGIIRVINVPIARGG
EGKDYFGVLEVESSDPGQFDQADADFLAAFAGLLGIAIEREQADARLAEA
LEHQALLTREMSHRIKNSLASVVGLLRVQSRSAHSDDVRAALQEASSRVA
TIAQVHDNLARGSRIGFIDLADFIEEFCGRLQATANGNQLCFRADPIPLP
ADHAIPLGLLINELVTNAVKHAYPDHCGVIELSASRIDGRLYVEVADQGV
GLPAGFDFDAPRCSLGFKVINGLVRQLRGRLQARANQPCGARFQLDLPIL
PAAAQIER
>RPC_4244 response regulator receiver (CheY-like) modulated CheB methylesterase
MSIAVASASIPEPVRYEPLRVMVVDDSVVIRGLISRWIEAEPDMVVAASL
RTGLDAVNQVERVKPDVALLDIEMPELDGISALPQLLAKQRNLIIIMAST
LTRRNAEISFKALSLGAADYIPKPESTREASAAEIFRHDLLQKVRSLGAR
VRRKVQTGPGAVAAPAIVRAREPAPVPAAGHAPAVPLLRRALSLTAPRVL
LIGSSTGGPQALMTLVADIGAVIDRFPVLITQHMPPTFTTILAEHLARAS
RRPAHEGIDGEIIKPGQIYLAPGGKHMRVARQGGNTVIALDDGPAVNFCK
PAVDPLFISAIEVWQSAIMAVVLTGMGSDGMRGGKDVVAAGGSVIAQDEA
SSVVWGMPGAAANAGICAAILPLNQIGQKLVRVFAGDRS
>RPC_2017 two component transcriptional regulator, winged helix family
MRVLIVEDDPQLGPWLRDTLAVAFGASDLVTTLDEARAAVAVRSFDLVVI
DRGLPDGDGVQLLLDLRGQQPCPATIILTALDDPLDIARALDNGADDYVA
KPFEPIELVARAKAVLRRLFLDKGAVVSIGNLSYDIINRAVYVGQDPIVV
PRRELAILEAMVRRVGRVVLRETLEVAAYGFDDDIQSNAVESHVSRLRRR
FREANCKVTIRPVRGLGYLLSSE
>RPC_4905 periplasmic sensor signal transduction histidine kinase
MIGSLRLRLFLVLFGATGVVWIAAVTWIYTSSQRELEHVLDARLQEAARM
VVSLVGSMEGGAPETLPELPATAAVPSHYERQLSCQVWSVQGRLIARSSG
APEQSLSDQHAGFSERQIDGETWRVYAAEDDAKGFRVLVGDRLGLRDRLV
TDLIKGLLWPALLIAPLLGVLIWISVGRGLRPLRVITSDLVGRDADDMRP
VDASRTPSEVQPLANALNALFEKVTVARRHEREFTAFAAHELRSPLTGLK
TQAQVALAANDPAVSQVALQQILLAVDRATRLVRQLLTLARLDARAEIDE
SERIAIRGLIDDVVRVTPRPDNVAVAIDDDLINATWRGNREYLEIAIRNL
HENAVQHMLGAGEVHWRIGESDRSIIVEDTGPGVADGELAKIGQRFFRGR
NKSAIGSGLGLAIVSLALERTGADLAIGNRPDRRGFRAAITLRSR
>RPC_1179 two component transcriptional regulator, AraC family
MYNLVIVEDEDLEREALRKILTENFDCIRIVGEARTGAEAVALIDSCDVD
LMLVDINIPIITGLDVIRHLREGHVDTKVVVTTAYDYFEMTREAIHLKVD
EYLLKPVRTQALVSTLETCIQQLGADRKCRVMVARLGELADQNAYQDGVA
LVRRHVEWICTQRDYPCRDVAQNSATALLALIRAKGLRVSAALARQVTEL
RTMSLDDRGLQSVLGVFLGLADLLFDVREEQLDEAGSTVQKAINYIERNL
SKRVTLEDAADYAKISACYLSRMFKKTLDVNFVTYLTTRRMELAKELLAG
TERSITNIAKEFSYNDLNYFCKSFKKEIGVSPSEYRRQAREGQGGAPGVR
MATMAEPRP
>RPC_4409 transcriptional regulator, Crp/Fnr family
MEPASRRRIEPHLEPTHFKLGDMVCDAGGLLKHAYFPQGSVLSLLTVLEN
GDAIETANIGREGGFGLFAAMYSRVSFNRCIVQLEGHTARCPIELLQYEF
KTSEHVRNLFVSYSETLLSQVQQTVACNAMHSTEQRMCRWLLMMHDRAGG
EALPYTHEFLSHILGANRKSVTLAAQAMQAAGLISYHRGTIQVLDRRGLE
KASCECYAIVKERFDAFLKPPATAVQGHSRGRATAE
>RPC_4938 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
MTALAKQLPAKRRLLLASDRTDRSCELARILGNVAEVETIPTSNLPDAPA
KDLSGVVVDINLRSPETVQLVRRKLLGSAYQPMPRLFVLADLLHHGAMQA
WALGATDTIARPFDPDDILQRIHAAFPRDDDGTVETESKGKALSEGVAAA
HAVMVKIFEKLPAGIPLTLGDVIKAENHILRAIRRTSLREWLSAVGRHHN
ESYRHCLFATGFAVAFAQYLGIREDDQRRLTRAALLYDVGKAFVPPAILD
NPDRLSLGQHGIYCQHPRLGYDALAAQGGFPREMLDVVLHHHEMLDGSGY
PDALHGDQISDLVRVTTLVDTFTTLVARQPKETVHSHAAAFAAMEAMGDA
LDQRLVQAFRPVALGG
>RPC_2454 SOS-response transcriptional repressor, LexA
MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEE
RGFIRRLPNRARAIEVIKLPELGVNPGGGNGRRGFTPSVIEGNLGRVRPA
ASLGGDDDSGRTVAVPVMGRIAAGTPIEALQTRSHTISMPADMLGSGEHY
ALEVRGDSMVDAGILDGDMALIQKNDSADTGDIVVALIDEEEATLKRFRR
RGASIALEPANAAYEVRILPPNRVRIQGKLIGLYRKY
>RPC_4245 response regulator receiver domain protein (CheY-like)
MKTCLVVDDSSVIRKVARRILEGLDFQIVEAEDGEKALEICKRSLPEAVL
LDWNMPVMDGYEFLRNLRRMPGGDQPKVVFCTTENDVAHIARALHAGANE
YIMKPFDKDIVMAKFHEVGLI
>RPC_3862 signal transduction histidine kinase
MWLRVGALNNVRTIGFATAGFFALAILITGGLFLWLDHRATMTRAEAATR
DMSRVVEEYAMRVFEINDLVVANVLAYVGERGGVDALRETTAAAEFLAGV
TRRTADTDHLLVVDAGGGLVASSGEVPPADSGFSDRAWFKAHRAAGVDRY
VGEAIIDRSTGELVYTYSRAIIDRQDRFAGVVQTAMRPSFLDDLVASSDV
GRGTVLAIWSASGTLVARTGMSAAQAGQTIEDVVLFREMADQATGTYRAV
SVIDGVDRIVSFRRLDKWQVVVTASTPLVSIFAPWYRHLSWTAAICGIVL
IAIGCLTWIGARANRREAIARTNLEAALKEKHILLQEIHHRVKNNLQVTS
SLIRMQEQRFTEPAFKAALRDTQDRLQSIALIHESLYRADAGSTVDLPDY
FERLVGDIAEAYGAKSRGISIELRAEPLVLELTRAVPVGLVVTEVVSNAF
KHAFAGTRGGTITISVQRSMGAIEIVVRDDGRGMPAATSCSGRGGLGTKL
IHAFVAQLDGQSSVTCDGGTEFRLTIPGERLQ
>RPC_4494 transcriptional regulator, Crp/Fnr family
MPPRFNIADVLTSPSGEGFFNGFNVRKHDKGSMICTGEGDENGVFVVMGG
RLKVYLVGDEREMTLFYLVPGDIFCMHSGCLIEAVEKSELRFTDIRTFSK
KLEQCPAIAFGLVSILGRAIMSCMRTIEDLMFHDIKQRIAWFFVDRASSE
GKATGAGITLSVELTIEEIANLIGSSRQTTSTALNSLIKEGYISRKGRTD
YTILDMPRLTTAAAGRLPAEEWSSVGKKIRPV
>RPC_4053 two component transcriptional regulator, LuxR family
MPPRGNVYVIDDDPAMRDSLEFLLSSVDFEVVLFESAVAFLEVVETLEFG
CVVSDVRMPGIDGMDLLKRLKANRNPLPVVIMTGHGDVPLAVEAMKLGAI
DFIEKPFEDDRLIGMIETALTQPKDGVRSDAIAPEIAARIETLSPRERQV
MDGLVAGLSNKVIAREFDISPRTIEVYRANVMTKMQAGSLSELVRMAIRG
GALKD
>RPC_0422 ADP-ribosylation/Crystallin J1
MRTSASHPLQIAAVAGGPGCGRVGLTFCPGKYDPYAASGAWKRDLASDLD
LIRDWGAAAVVTLVEQRELAMLRVETLGEEVLRRQMAWFHLPIVDVSVPD
QDFELAWDSAGAGLRAILRSGFDVVVHCRGGLGRAGTIAARLLAELGFEP
AAAVREVRKARPGAIETPTQKHYVLAVRTADESPPPADRIRDRAIGALAG
LAIGDAVGVPLEFQPRDSTPPLHDMIGGGPFRLEPGEWTDDTSMALCLAD
SLLACPGAFDAADLMGRFVAWWEQGANSVNQRGCFDIGLTTKAALQRWQR
ERDPYAGSPDPRAAGNGSLMRLSPVAIRFWNDRQALQDVAIRQSRTTHAA
AEALEACALYAEILADAIEGRPRSQLLRPRDGAYAGAVQAIAAGSWRGKR
RDQIQSSGYVLHSLEAALWCVGSTADFSSAVLKAANLGDDADTTAAIAGQ
LAGALYGASGIPRHWMARLAGREAILSRAAALFDRSLGAQAPPPTIADQR
LFGLD
>RPC_4608 response regulator receiver domain protein (CheY-like)
MTSNVESDVSALRRILVVDDSSLVRLYYRAALEKAGFAVEQAINGLEAME
KCLAQRFDLVIVDVNMPRMDGLSFLRALRGSAAEIASLPALMISTEAGQQ
DRDDARAAGANFYLVKPVSEADLLSHVALLAGAP
>RPC_4087 transcriptional regulator, LuxR family
MPLKRQELPGGAARPAPAAIQSNAAIAEQLVGPLTALLQFMQDLKTLTGA
DPGIAPADTLVDDALRETQRVCAIVEGLGVRPVPPADATLVPGQDQGASA
WWARCIDAAGETPTATGRSIRHRLTPREREVLKLISGGSTNKEGALQLSI
SPRTYESHRAQIMRKLGARNAADLLRKVLAEVR
>RPC_1478 putative phosphohistidine phosphatase, SixA
MRRLILLRHAKTESDAPSGKDHDRRLDDRGREDAAAIGGWLIGQQLRPEL
VLVSSAVRAQQTWAIVGDQIPADAPQPNVAHLAELYSATPATMLGILREV
PGHPQLILLIGHNPGLHELALGLSCSKGGTEHKPLPGNMPTAAVAVIDFA
IKHWGDASFGGGRLTQYMTPKLLKAPHGH
>RPC_0502 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MTSADPSTAGSSAASPGRPDEADILAALGHAAFVWDIASDAMAWSPAAAA
IFRDLPAEALASGASFANLIEPVRAVRSEALLGSPGGSHGVAYRIEYGVR
ASTAAPVCWIEETGCWFAAPDGKPARVEGIVRVNNERHAREQQLVKLAQH
DPLTGELNRSHLMASLAEAVDEASQFRSNFAFMLIGIDHLARVNDAFGFD
VADQVIGEVAKRIRARLRAGDLLGRFSGNKFGLILKNCTIDDMTVAAERF
LAGIRDEVVPTKSGPVAVTASIGGVSAPRYARGADEALNRAHESLDAAKS
RRRGSFSLWRPNVERDAQRRVNIRVTDEIVTALNERRIVMAFEPVVQAVS
RAPAFHECLVRMKQDDGELLLAPDIVPVAEKLGLIRLVDHRVLELVVAEL
AAAPGVELSLNISPDTTMDADWWASIESLLGANPGVAERLIVEITETVAI
QDLDDVRGFVNRLKNFGARIAIDDFGAGYTSFRNLRNLGVDIVKIDGAFV
QNIARSADDRAFVQTLIDLARRLEIKTVAEWVQDEASAIMLRDWGCDYIQ
GRLIGLASAERPWAVRATGVTAAS
>RPC_0513 PTSINtr with GAF domain, PtsP
MRSASGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSTYVL
RVDNTLELYATEGLNRDAVHQTVLNAHEGLVGLVASEATPLNLSDAQTHP
AFSFRPETGEEIYHSFLGVPILRAGNTLGVLVVQNRAKRTYVEEEVEALQ
TTAMVVAEMIASGELSAMALPGAEPAARHSIHKTGAVLSDGIALGHVVLH
EPRVVITNYIAEDLPKELKRLDAALTKLRADLDRMLERGDVAESGEHRDV
LEAYRMFANDHGWSHRLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYL
RDRLHDLEDLGHRLMRQLVGQDHAPSREQLPDNAILIARSMGPAALLDYD
RKRLRGLVLEEGTANSHVSIVARALGIAAVGEIPNAPGIADPGDAIIVDG
TSGSIYVRPSAEVESAFAERVRFRARRQAQYSALRELPCVTKDGQPVDLM
INAGLVIDLPHIEDTNCSGIGLFRTELQFMIGQSLPRSSDQLALYRAVLD
AAGPKPVTFRTLDIGGDKALPYMETVVEENPALGWRAIRLGLDRPGLLRS
QIRALLRAGGGRSLRIMFPMISEVAEFDQAKAIVERELTYLRQHGHTLPE
RVDVGTMVEVPALLYQLDELLERVDFVSVGSNDLFQFLFAVDRGNAKVSD
RFDSLSAPILRVLRQIVQRANAARRAVSLCGEMASQPLGALALIALGYRS
LSLSAIQHGPVKAMILDLDAAKAAAMITPLLNAPAGSVSIRNKLTEFAES
EGLSL
>RPC_4669 MCP methyltransferase, CheR-type
MQPLMIEPLPRLSDRHFRAIAELVEQQVGIRLPENKRLMLEGRLQKRVRA
LGYDDINEYVDRLFDEDLFDAELIHLIDCVTTNKTDFFREPFHFDFLCDT
AVPELLRKIRGRPLKIWSAACSTGMEAYTIAIVLDDLQRNGGPSFQFRIL
GTDISTGVLQLAEEGIYTKEMIAPVPEAMAKRYFLSSKDKSRSEVRIVPE
LRRSVAFMRMNLMDAVYPVDRDVDVIFCRNVLIYFDKPTQCKVVERLCSH
LRPGGYLIVGHSESMIQNQSIKLKQVQPTIFKV
>RPC_1083 transcriptional regulator, LytR/AlgR family
MIRALIVDDEPPALGELRVLLNEAGDIDIVGEAGNAVEAIAAINRLQPEV
VFLDIQMPRISGLEMLAMLDPAHAPRIVFLTAHDDYAVQAFEENAFDYLL
KPVDPLRLGKTLQRLQRDRAPQDVGSLKSAHPLRQIPCAGQNRISLLRVE
DVEYVASRASGVFVVGEDGKERFTELSLRTLEERTSMFQCHRQYLVNLDR
IKELRFEEGGLGHILTLAGRSVPVSRRFLSVLKEKLGIG
>RPC_4668 response regulator receiver (CheY-like) modulated CheB methylesterase
MTNPMLRPKIRVLIVDDSASVRQILTTILNADPDIEVMASAADPFAAARR
LQDEIPDVIILDIEMPRMDGITFLRKIMAQRPIPVIICSTLTEERSDVMF
EAFEAGAFDIVPKPRIDTTHALLEASARMCDAVKAAARARIRPRRPPRMV
VEAKLTADAIMPPPVSGRARPTTERLVCIGVSTGGTEALRDVLECLPAKA
PAILIVQHMPQGFTAAFAKRLDSLCEIEVREAQDGDVVVQGCAYIAPGGR
HMLLQRTGQRYHIAIKDGPPVSRHRPSADVLFRSAAQYAGPNALGIIMTG
MGDDGARGLLEMHKLGATTRAQDEESCVVFGMPKEAIALGGVDKVVPLAQ
IPREIMLWQDAKQPVPTV
>RPC_0318 diguanylate cyclase (GGDEF domain)
MPLHRLQPTASSAAEMTAALQSQVDAQAALIRELSASLAHSRKIFDRSSA
AARIGVWECTLPDESLSWTDVVYDLFDLPRGAVLNRRQLLDCYPEESARA
LHRLRSSAIEQLSGFSLDTEIVTVKGNRRWIRITATVESEDGVAVRIFGI
KQDITDEKILADRTRYLAEFDVVTGLANRGRFQSTLAQLDEAADARPFGA
LLLVDLDEFKAVNDCFGHAAGDECLKQAGQRISKACGDARLVARFGGDEF
AVLLGSHQRFAEISEIARSIIEEMRRPIVFHGHELQLGASVGVALVDGCT
ASQLFVMADKALYAAKEAGRGTFRIHKPGTGGRTAAVTRPPGGPRRILRG
>RPC_4052 PAS/PAC sensor signal transduction histidine kinase
MTDRKQPSLDERSRSERLQFGIEESGIGVWELNLATRQLSWSKTARDLFG
FSGDKPISYDIFLSLLTPEDRARTVLALKQSVDSGDNFDVEYRIERRPGS
GTCHWVRARGGVVKAEDGTPRHLCGIILDIDDQKQLEEALRTQQSQLRSI
LDTVPDAMIVIDGHGIMRFFSSAAERLFGYSEGEAIGRNVSELMAGPDRA
RHDNHLDRYRASGERHIIGIGRIVTGRRRDGTTFPIHLTIGEMRSGGEPH
FTGFIRDLTEYQQTQARLHELQSELVHVSRLSAMGEMASALAHELNQPLS
AISNYMKGSRRLLSGSNDPNRPKIEAAMDRAAEQALRAGQIIRRLRDFVS
RGESEKRVESLAKLIEEAGALGLTGAREQGVLLRFNLDRQSDMVLVDRVQ
IQQVLVNLFRNAVEAMAHSDKRELVVANNRVADHMIEVAVSDTGSGFHDD
VKSNLFQTFFTTKETGMGVGLSISRSIIEAHGGRMWAETNSAGGATFRFT
LPAAASEDLADAT
>RPC_3189 transcriptional regulator, Crp/Fnr family
MQSGPSLIELLASETGAALRAIFRERNLPAGTLFDAAEFRDHVFVIKSGR
LRIFLATTERELSLAYLGAGDMFSTHTRAHLQAVQPTTLLMAPRELLEHE
LAHYPALRATIIRVLARVLSQAMTLVEDLAFHNVRGRIARYLLRSAGRHK
APLQNGSLIRIDLQMEEIAALLGTTRQTVSTEFNAMLHAGVLVRHDRRRY
GIQDLARLQAFASEGDGVG
>RPC_4822 two component transcriptional regulator, LuxR family
MTPTPSTHLIIADDHPLFRDALRHAVASVVPTAKIGEAGTFEELTAILEQ
EADVDLVLLDLSMPGISGFSGLIYLRAQYPAIPVVVVSASDDVGTIRRSL
DFGASGFVPKRFGVEKLKDAIQKVLDGDVWVPPDIDLNAASDPEMTKLRD
RLITLTPQQVRVLMMLSEGLLNKQIAYELGVSEATIKAHVSAILQKLGVE
SRTQAVIAAAKISGSQWRQDTPQ
>RPC_0382 PAS/PAC sensor signal transduction histidine kinase
MSGVIASMRRTLLSCTAPARSGGAAVALAMWASVSPASAAETPVDSALAA
LFDFSRQDIIALTMAVAVLGFSVVAAILLMRTRLRAAACETRLRGNIQTL
QVEADRFRALLFAESQVLIAWAAGDSRPQISGDVSLLIPQAGLAADQSVQ
SQRILAFGTWMPPEPALKMDHAVDALLESGEGFQLNLVTSTGRSIEAVGR
AVGGQAIVRMRELSGLRRELAEMTQRHKTLQEETEMLRDFAAAAPWPIWT
RRDAGELNFANAAYARATEAGSVAEAIERNLELLESNDRTALSRALNDNA
NFSARLPIVVRGERRIYDVHAMKVRGGSAGAAIDASEAYALGAALVRMAE
AHRRTLDQLSSGVAVFDEQHRLAFYNDSYRRLWDLDRAFLDSNPDDSSVL
DRLRAARKLPEQPNFREWKMRLHEAYRAVDPAKDVWYLPDGRAVSIVTTP
NPEGGVTYLFDDVTESLELARRFDGLINVQRETLDNLAEAVAVFGSNGCA
RLFNPPFARMWNLSPEALQLQPHIETVVDWCRPLFDDPAIWQTLRGAITG
IENRIAIPLKLERRDGSVLNCMTMPLPDGATMLTFQDITDTENVERALRE
RNEALETADQMKVDFVHHVSYELRSPLTTIIGFAHFLSDPSTGPLTEKQE
EYLSYITTSTNALLAIINNILDLATIDAGAMTLNLGQVDIRKAIADAIEG
IQDRLARDHIVLEVNAAPDVGHFIADERRVVQVLYNLLANAVGFSPQHAA
ITLSAKRTEQTVVFTVTDTGPGIPPDVKEKVFDWFESRSNGSRHRGAGLG
LSLVRSFVELHGGNVRIDSVVGKGTTLTCSFPIDQSQQRNAAE
>RPC_4653 periplasmic sensor signal transduction histidine kinase
MRRLGWIVPKRISGQIAAIVVISIIVIHAIIAVTFFVNRPGEQEPFAHGR
GELTALVQILGKASADERPALLAGMARSFPQFEIVPGAPGPLVAIEPGAG
PSPSPPLRHLGRDYRQLRLEGTSDERIGVALPDGETISVRVPEDWRPPFF
LGGPGMITLLFVVVSLTLLGLWAARALSAPLSSFAKAAENFRLDNAAASL
PERGPEEIRSVARALNHMRARIAALVDDRTKMLAAISHDLRTPITRLRLR
CEFIEDEACRNHMLGDLDQMRSMLESVLSFLRNGRNREAMTLTDVATTLQ
LIADQFTDAGQTVSYHGPAHATVMARPDDLHRAVTNLVENAVRFGAETSI
GLAVTPDAVKIDVADDGPGISDAQKSAMLEPFVRGDDARNMDEASGFGLG
LSIAQAVALAHGGALSLNDRKPHGLIVRITLPSPSRRAQPGAASAS
>RPC_3781 response regulator receiver domain protein (CheY-like)
MTRDNAVPTVLVAEDHNYDQMILKEVFSRAGIRADLRFVNDGEQMLDYLH
RRGRFAEALSAPTPALILLDLNMPRLDGRKVIRMLREDDTIRHLPVIALS
TSESIKHITEAYSIGINAYLVKPANIPDYVTKINSLWQFWMVAASLPVVE
TSPS
>RPC_4415 protein tyrosine phosphatase
MPASPRSRHPQAVLFACGMNAVRSPMAESLLRQIAPRTMYVRSAGVKKQE
LDPFAVAAMAELGEDISKHKPTTFDELDDYEGLNFDLIVTLSPEAHHKAL
ELTRTHAIDVEYWPTADPTGLDGNREQRLQAYREVRDSLQQHIRKRFGRH
GLGNE
>RPC_2722 sigma-54 factor, interaction region
MSHDIVVFSVTTSLTKTIKRVLADMGESFRVYEEDLFNVLPLVEAEVKAG
ARVIISRGGTADLIRKHFTPPVVEIHHDYFGVHKVVQQALEVSDKIATVA
FPLYAEIMQNYSEMCGIPIFTRVIRESGEIEEALEELQARGIRVVIGGLS
VARMAKRFGIAAIMGDADEMAIRLAVEQARHTLKYVLNLDRQYNIVSAIL
NCANEGILGVDGSGTIFELNHHAHRLLGCGRGDNINTILPESDSRIAITN
GEPIRSRIVNSGKATLIFNASPIDYGENGGGTVLTVQEGDYIQGISQKIR
QQHIAKGHVARIRFEDIVGKGEAIHHTIERAKKFALSESSVLIIGETGTG
KELFAQSIHNHSRRHSKPFVAINCAALPNNVLESELFGYVRGAFTGAKDA
GKSGIFELAHGGSVFLDEIGEIPIEMQAKLLRVIQERQVQRIGDDKLVPV
DVRVISATNKNVDNEVKLGRFREDLYFRLNTLELELPPLRERTGDVPTLI
RHFMGRAGRREVSFTPDAQRFLNVYSWPGNVRQLGNFIERLNVLYDQPSM
SLSEVCDLLGTAAGASVQGAAQQRPSTLAPDDENVLEKMERDLIAEALDI
TTGNREKASIILGISPSTLGRKKKQYGL
>RPC_2871 response regulator receiver domain protein (CheY-like)
MSKPVTIIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTAALDYLFGAD
GSGIEHKGRALLILLDLNLPDTSGIDILRRVKENDHLKCTPVVVLTTTDD
AHEIKRCYELGCNVYITKPVNYESFANAIRQLGLFFSVIQVPETIA
>RPC_0820 periplasmic sensor signal transduction histidine kinase
MCRAHLVANNRFRKAEPLEPETEQDEVRVWRRRRWLGLSGKLLLLTIPLV
LIAEILIYVPAIANFRLNRLNDRLAAANTAALVLDASPSGMVPESLARDI
LDSIGARAVAIKMGQQRRLLASGELPPQIDHDVDMRSVNPWEAIVDSFQV
MFESGNQAIRVIGPAPGGGQFLEVVVDELPLRQAMYRFSSNLLLVSLTIA
ILTAALVYLALHFLFVQPMRRLTANLVGFHQNPESAANIIVPTQRTDEIG
VAERELSDMQRDLVSMLHQKSRLAALGLAVSKINHDLRNLLASSQLLSDQ
LASVPDPRVQRFAPKLMRSLERAIAFCQSTLSYGRAQEAAPDRRMLLIEP
VVAEVRETAGLASDASITWVSSIERGLTIDADPDQLFRVLLNLVRNAAQA
LEGQQSDAGIQQIRITGRREGAVAIVEVSDTGPGLPQKARAHLFEAFQGS
VRAGGTGLGLAIAAELVRAHGGDIHLVEGTIGATFRITIPDRPVELLTIR
GERARA
>RPC_4750 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MQLAPSSRDIDQQMSPSIYAGMVDSLFMNPLPMIFGAFGPAIAGAVIGAV
TGDIPIWLCVPLFVAVGIARAFQMYRYKQRNAPLSAAEAVNWEQRYRVGA
IVYGIALGIWSATVLLRTSDAAAHMLCVTTVVAYTSAGVGRTFGRPRIFH
LQVLLGCGPLILALMFVGGAYHFALALLSIVFFVAIRHLTSSLQRIYLNA
WIAREREAAIATQFDTALNNMPHGLCMFSGSDSRLAVMNQRFADMMRLPH
DFMHRSGSASDILAACVAAGTISPSSGRMIVSEIENAIAGEIITVDSETT
DAHAFCWTFQPMIDGGTVVLVEDITERRSAEARIIHLARYDELTGLPNRV
NFRDEIERLLMAVHGHAETRPSALLFIDLDQFKQVNDTLGHPCGDQLLCD
VADRLREMLRPEDFVARFGGDEFVVFQQHIASKEDSALLARRIVDRLSER
YLIDHHVVEIGASIGIAVTAPGVKADVLLKNADMALYRAKADGRGTFCFF
REEMAHTVESRRIMELDLRRALANEEFEIYYQPLVNLKTGRISTCEALLR
WNHPVRGTVSPVDIIPVAEEMGLIVDLGRWILRKACMECMRWPDAVSIAV
NFSSQQFHQRDVMNEVRYALEVSGLPANRLEIEITESSLLRNTQWTLDAL
SQLHAAGVRIALDDFGTGYSSLSYLHNFPLQKVKIDRSFLEGIDADRPLT
LLRGVARLSADLGMSVVVEGIETNEQLELISADGTVTEAQGYLFSRPVPA
AQVRQLLAASHGSQSDTHVQARAARSIA
>RPC_4509 multi-sensor hybrid histidine kinase
MLIVHKDKTIRVPLAWIIGAIFALTSGLIYFYAASSIELNHQNFKLESDG
IARLASAEGDVALVRIKDLIGLVASGGEALIDGKLRRAAKKSANIREIGY
VRLGGDFSQKYFLTDRTALSIDRQEMASLNLELKRNLALTRGVVTSAYPR
TFAAISKDLVVFVQGVPDDTGPDQDFIAYVILDLKTAVSQAASNFATSTL
VTAIRVYIDGKVSELSVDAVVQKAGLIVEPHTSSRTVTLSSDVELEIEFA
EQFPATRSLIIFALGLIGIFVISCTLFTMFARSARAQNRILKHAVRRAEA
ANEAKSEFLANMSHEIRTPLNGVLGMADVLMRTDLTPVQRNYAQLIVTSG
SLLMTILNDVLDMAKLDSGQLAIKPCKVELQLQLKEAASFYFAQAREKDL
ELVLDVAPDVPRHVQLDPMRLRQILGNLIGNALKFTSKGGVAVIVSYQHQ
DEKSGRLHISVVDTGIGLTEEQQGKLFGRFVQAEDDGQRHREGTGLGLAI
CKKLCNAMGGEIGVTSEKGVGSTFSFWIPVIEERADSEDDARGQCIGVVT
GSEAQFKAIVHALSDAGVHCRKFEYGPDCLPRILAAMKAAPMRALIFDED
RNIQRASDQWQALQAEIGPGLPALILGESQFSPHYEKFSGFLVKPFIAVD
LIDELRSISAEAAAPPLPSGGVLRGASAEAMELPKFSGSSVLLVDDNQIN
LIILEEIMKEFGFAVEATTEGASSIRMAEAGSFDLMLIDCQMPVMNGFVV
TGKMRELMAAGEIKSCPIVAVTANALKGDREACIEAGMDDVVFKPISIRI
IADALDQLVKSGLLKAPSALGSERATAASRATAAVPRPAVLDLAQHDAPA
APAPVVAAPLVPPPPVVAAQPVAPAPNVPAAATAKPNPPAPETPAGKVPL
MDLAVLKQTRDLVRNLDTLLSLYRADTRNYLNVLREQIDEDELDEAVLPA
HTIKSSSKILGASGMAALAGLMETRLRTGEGCSPAELRKLLQRMEDIFAH
TLRQLDALEAQGLLKQPVAAAS
>RPC_0615 signal transduction histidine kinase
MFEIDLRPDALDQATQTPPQDILEAENVSLRLLLAQAEINAQELLEQAGI
DAKQREAAAKLQKLILEELHHRIKNTLATVSAIASQSLRNATSTEHAQQA
IEGRLLALGRAHDLLLQAQWTSADLGKVIRGATEAFDNRDAAKFSIAGPD
IRMNSGAVIAIAMTLNELCTNTTKFGALSAPAGHVDIAWALDDAGHRLHL
TWSERGGPPVQAPTRRSFGKRLIETLGRQLKGEVTLSYPPEGFIYVIDVP
LESLTSQP
>RPC_3251 transcriptional regulator/antitoxin, MazE
MKVKVAKWGNSLGIRLPSAAADSVGATVGSELDLTIENGELRLRSIRKTS
AQRLEEMLDEMDRLGPEQESETVDWGPDRGSEIIDDDYSRGILVEGPDGV
PVRADSLPARHPKKRDETS
>RPC_1308 putative PAS/PAC sensor protein
MTESGKAVAEIATRPTGQPDLTLLLDMDGIIRDATLSGAMAGESIDGWLG
RPWSEVAGETGGDKIKRMVDDARAIGFSAFRQINQRFPSGVEIPMEFTTM
LLGDQAGMLVLGKNLQAVAELHARLIAAQQTMERDYWRLREVETRYRLVF
EASNEAVVIVSPTDLRIVEANLAAVQALTGLQRGNEDLAGREFLLDIRPQ
DREAARAMLSRVRERGKALSILVHLGPSAQPWMLRGALMPSEPGQIFLLH
FTPAAVSAPSPEQIEHSAIKELIDRVPDGFVALDAAGGVQHANQAFLDLV
QVGTKAAVIGESLARWLSQPGADWNALLSQLRRYKTVRLFRTTLRGELGS
ETEVEISAVDVDGDEQSYVGVLLRNVSRRFNDAVEGDSLRMALGPISEQL
GRSSLRKLVKDTVSIVEQHYVKEALEHAGGNRTATAELLGLSRQSLYAKL
NRYGLDDREADTQDISED
>RPC_2885 PAS/PAC sensor hybrid histidine kinase
MLDEIFPGDGELSRLMRSHDWSATPLGPPETWPQGLKIPLRMMLTSRFEM
WLGWGPDLAFFYNDAYVPTLGSKHPAALGRPMREVWREVFEAVKDRVRSV
MVDNVATWDKALLLLLERNGYPEETYHTFSYSPLRGDTGVTEGLMCVVSE
ETERVISERRLNTLRALADGLLNTRTAEGVINEIRAAVLLDRKDFPFGLV
YLRDHAGGWSGQPCSLDAGALLTVDWPLHGFEGGASARRVPLAPLGLALP
CGAWDRPPGDALVLPIAHGSGESFGALVLGLNPYRPHDPDIVGFAQLLAG
QISGALANVEALKSEIRRADRIWINSRDLLVVVDADGIFQSVSPSWTRIL
GYAPDEVVGRSFRHFIHPDDLALATGGLETATQAIDLTAFEIRQLSNTGE
VVWVSWNTKLEGRFVYAYGRDITAEKTQAAALLVAEDQLRQSQKMEAIGQ
LTGGIAHDFNNMLAVVIGSLELLDRKIGDPSAAVRRYIDAAMDGAKRSAA
LTQRLLAFSRRQPLKPEILDANRLVAETSEILRHSIGGNVRLETVLAGGL
WRVHADPNQLASALLNLAVNARDAMDGGGRLTIETQNAHLDDAYAQANFG
VCAGQYVMIAMTDTGTGMAPEVIARAFDPFFTTKEVGKGTGLGLSQVYGF
IKQSSGHVKIYSEPGEGTTVKIYLPRMFNAIDEFVPRLASTADPAGSFGE
LILVVEDEPAMRQFSIEALGTLGYRVCEAEGAATALALLDAHPDIALLFT
DIIMPDVNGRQLADEACRRRPDLKVLYTTGYTRNAVVHNGVVDPGVQLIS
KPFTIDQLAEKLREVLDR
>RPC_0315 multi-sensor hybrid histidine kinase
MSGTLDLNLAPDGTARRAPWRKLAGRVAMIFAAAFGAAYGLIVGSRVELA
GYHPHAVAFAGSLLVGLGCVLFAIPSIKLRAARHELRLLALHNDALADRN
WELQEAEYRARSLFESQSDLIVLRDAEGRIGFVNDAYCELAGRASAALIG
SPDTLDVLEQSEVITEPNGTRTYDQKVATAHGPRWIAWREGIVRNDSGRP
AETQCVGRDVTARAETERALAEARDIADTANRAKSRFLAMASHEIRTPLN
GIIGMSGLLLDTHLTPEQATYARAVKTSGDALASLIEELLDYSKIEAGKI
DLENRPFALSALIEDITELLAPRAQARHLEIAADVDERLPAEVIGDAARL
RQVLLNLAGNAIKFTATGGVALIVEPGAMPGEIRFMVRDTGIGIAPEAQA
RIFREFEQADELIARNYGGTGLGLSISDRIVKRMGGQITLHSAQGTGSTF
EFVVPLAAAATAAGGATASVTAPDLSGQAIMLVAPQTIAASLIARRLQRW
GAQTCVLADREVAQALLPERAWQAILIDRAIGTDDVASLAEAARPHAAQR
IVMLTPAERHELRDTAASGLTGYLVKPLRAASLAARLGLPDVVSPGIADD
DLAEPAQDPATDAATRPVKPAPQGLSILVAEDNEINALLMRSLLSKLGHR
AVITSDGEQALESWLAADSAGAAYDLVLMDIQMPHLDGIETTKRIRAHEA
GHRARRTPILALTANTLVEDRYACFEAGMDGFLVKPLDRDKLTEALASMQ
ASRYLAA
>RPC_1232 transcriptional regulator, Crp/Fnr family
MRLGASSLPLRLTARPTGRNIAVTSLNFRFPLENKLLAGLPRAQFDLLTP
HMTTASLPQGLVLVEPGDEFEHVYFPHNGMLSLLAVLRDGKAIETATVGR
EGVVGAMAGFGLYKSLVRVVVQMPTSLTKIPSSQFRKVATGSDVLRNLCI
QYNEVLLSQARVTAACNALHLIEARFCRWLLQSADRAGGDTVNLTQEFLA
EMLGVRRTSVTEVATKLQTAGLISYSRGVIKILNRPAVAKLSCECYETLL
EQSSMLL
>RPC_3959 diguanylate cyclase (GGDEF domain)
MSKKSSAPAAAKAGSRRQPTKTAKLAADPLAARLKAANLENRRLKAQLAA
ARAKLDEMRASADTDFLLDILNRRGFERELNRAIAYIQRYHASGALIMLD
VDHLKPINDRFGHAAGDEVLRSVVDVLQHHVRASDIVARLGGDEFVLLLW
NLTEADAQAKAEALEAAVDALQFGFAGRTASAGISAGIATLGPGTDARAA
LAQADRAMYARKAIRHQQRAAAAAITR
>RPC_0596 periplasmic sensor signal transduction histidine kinase
MAWLRRAGQFFLALSFSSLTRRIVSLNLAGLVLLVASILYLSQFRAGLID
ARAQSLLVQAEIIAGAIAASATVETNTITIDPDRLLDLKPGETFGPPDEL
SGLDFPINPERVAPVLRRLISPTKTRARIYDRDGVLILDSRSLYGRGDVL
RFELPPPTTEKPGVAERTMIAIRTWLNRGDLPLYRELGPENGNGYQEVVQ
SLDGQKSSMVRINDRGEVIVSVAVPVQRFRAVHGALMLSTQGDDIDQMVT
AERLAILKVGGVASLVMMVLSLLLASTIAGPVRRLADSAERVRRRIRTRV
EIPDFTGRRDEIGHLSGALRDMTEALYNRIEAIERFAADVSHELKNPLTS
LRSAVETLPLAKNEKSRSRLLEVIEHDVKRLDRLISDISDASRLDAELQR
QDVAPVDLRRLLATLTSVANETKLGTNVGVEVRFEGAGNDAFWVPGHDSR
LGQVISNLLVNAQSFSSAGGKVRIVCRRRKTEIEIVVDDDGPGIRDDALE
KIFERFYTDRPHQGFGQNSGLGLSISKQIVEAHGGKIWAENRPGPVDADG
EPSFAGARFVVRLPAT
>RPC_0095 response regulator receiver sensor signal transduction histidine kinase
MAEQDDVLQLIDDSGFAPEPSSAKKWKVAVIDDDHAVHDGTRFALSDYCL
NGQTLEILSAYSAAEGRVLMREHPDIAAVLLDVIMETDAAGLDLVEYIRN
DIKNETVRIILRTGQPGQAPERRVIVDYDINDYKAKTELTADKLFTSLTA
ALRSYQQLERMVQTRRGLEIIIDAASTLYDFKSMQRLAEGVLTQIASLLN
VDCAGILVLRDGGQVCDDFAVLAGSGCYRRFIGSCGPGALDNDVRQMVEA
AFRRRKHEFDDQRTVLYVRTGSGREVVVLLQAERELSDTDRSLVEIFGSR
LSIAFDNVILYQQLNQANAQLEDRVAQRTRALSQANRRLSSQWMRLQRAN
GFKNEILGTVAHDLKNPLGVILGRTEMLTELIGADAAKESVCAQVDHIRD
ATRRLTAMVDHLISDAMADAFDITIRREPVDISALVTEVAEANRPLALNK
QQEITVSAPQDQVTVCDSDRIREAIDNLVSNAIKYSPVGGKIALIVDRSG
DNTVIRVTDQGAGLSPEDLGRLFGRFQRLSAKPTAGESSTGLGLSIVKKI
IDMHGGNVSAESAGPGEGASFTITLPAAAASA
>RPC_4100 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
MSFWQRNSDADSAAAQLEAIGRSQGVIEFGMDGSILTANRNFLDVLGYTL
AEIQGKNHSLFVDPAERGSAAYRGFWAALQRGEFQAAEYKRIGKAGREVW
IQASYNPILGRDGKPFRIVKFATDITARKLRSMEDAGKIAAIQRAQAVVE
FKLDGTIITANDNFLKAMGYTLDEIAGKNHSIFVESATRDGAAYREFWAA
LNRGEYQAAEYKRIGKAGREVWILATYNPIIDETGKPIKVVKFATDVTAQ
RLGTANLAGQVEAIGKSQAVIEFGMDGTILTANDNFLNAMGYTLSEIKGR
HHSIFVEPAERDSPAYGAFWAGLNRGEFQAAEYKRIGKHGREVWIQASYN
PILDLNGKPFKVVKYATDTTAQVIARLKSDRVRAMMESVAAGAEELNASV
REISEAMTKSRNTAMSAVSKVESADEQAQRLSVAAQAMGGIVDLIGNITG
QINLLALNATIESARAGEAGRGFAVVASEVKSLANQAKQATDRIGSEIAG
LNGISGDVISALLAIKTEIQNVSEYVTATAAAVEEQSTVTSEMSSSMQRA
AAEAASIGR
>RPC_2224 periplasmic sensor hybrid histidine kinase
MYIGRANQVRRRMHAMMDSIPSAARFVRGFQSLYARILLVVGVALLPAFG
FLVYSEHEGALIRQQFMEDEALRLTALVNAEQLRIFESAEQILDLVIASP
QGTRSSACDRLAADIVHIQPRYAAVAVIGPDGQIGCRAARSSTTMAAFEP
AYRLALQDDGLFIGEYIAATALQPATIGFAKRFHDADGAIAGVAALSLDV
AWLQDRFKRTPLPPGAEAMIADRNGIILARTAEAAGFAGASIPADSRWIL
RGDALRLVSIAGADGHSRLAVYAPLGLEPKGVFIDVSLDREVAFVSMTRT
NRVGEVLLVGGALLGLLLTILIGSRLIRRPFNRLLAAAQAWRAGNLATRT
GMGAELGEFGRLAAAFDQMAETLEHRDRALRLLRDNLEARVTQEVAARNT
AQARATQAERTQALGLLAGGIAHDFNNVLQTIVGATHLIENRPGDEAANR
RLARLAISAAERGEAITSRLLSFNHKTELRAESLDVAPLLGGLREILSHT
LGAAIGVSVQTEPRLAILADHRQLETVLVNLATNARDAMPKGGQLLFRAE
AEADAAEGVPAPSNLRPGRYIRISVTDTGAGMAAATLARVGEPFFTTKKN
GDGTGLGLSLAREFAEKSDGAMAIHSAPGQGTTVTLWLPAARAATADAAG
VVLQPHAAAHEAPAALAHGRARVLVVDDEEMIRELIGEQLRDAGYDTLTA
AGGAAALELLDNCEPVQLLVSDLSMPAMDGVALIQAAQLRLPGLPTILLT
GYAGAGVADALRKAIRGPHALLRKPVTGIELVDQIQALLAGQQVPLQPTS
LH
>RPC_0618 protein tyrosine phosphatase
MAERIYNVLFLCTGNSARSILAESILRKDGRGQFRAFSAGSQPKGAVNPF
ALKVLSSLDYPTEGLRSKSWQEFAAPDAPVMDFVFTVCDNAAGESCPVWP
GQPMTAHWGIEDPAEVAGSDFMKEAAFVTALRYLKNRISIFTALPLKRLD
PLSLGSKLREIGQTDGASSRRPDVA
>RPC_3801 MCP methyltransferase, CheR-type
MTPLDYEYLQKLLKERSGLMLSADKRYLLESRLLPLARKIGVAGISELVQ
KMKSGPDSLIHDVVEAMTTNETFFFRDKTPFDHFKDSVIPDLIKARAGRK
SLRIWCAAASTGQEPYSLAMILKDMSAELAGWRIEIIATDLSPEVLEKSR
SGLYTQFEVQRGLPIQMLVKHFKQVGAMWQLNADTRAMVQYRQFNLLQDF
AGLGKFDVIFCRNVLIYFDQPTKSDIFNRLMKANEPDGYLFLGAAETVVG
LTDSYRVCPKRRGVYLPNPPAARSPSATLGQFAGGLKTGTATSR
>RPC_3309 response regulator receiver domain protein (CheY-like)
MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNGYEALELVRKLRPDLI
LMDIQLPQVSGLEVTRWIKDDPELRAIPVVAVTAFAMKGDEERIREGGCE
AYLSKPISVGKFIETVRRFIG
>RPC_2735 two component transcriptional regulator, winged helix family
MNALILIAEDEPQISEILDAYLTREGFRTVRAGDGRTALDLHLALKPDLV
LLDVTMPRLDGWEVLAEIRRRGDTAVIMITALDQDIDRLQGLRIGADDYV
VKPFNPVEVVARSKAVLRRVGQSSAGRMLRVNCVAIDLDSHMVKIEAGGT
AQPLPLTLTEFRLLAHMARTPTKAFTRSELVDACLPGSDALERTVDSHIS
NLRKKLDEAGAPGMLSGVRGIGYRLASV
>RPC_0945 two component, sigma54 specific, transcriptional regulator, Fis family
MRLLIVGTLKGQLTTATKIAMDNGASVTHSENNEQAMRVLRGGKGADLLL
VDVALDIRDLVMRLEAEHIHVPIVACGIANDARAAVAAIHAGAKEYIPLP
PDPELIAAVLAAVANDSRELIYRDDAMAKVIKLAQQIAGSDASVMITGES
GTGKEVLARYVHSRSNRAKKPFISINCAAIPEHLLESELFGHEKGAFTGA
VARRIGKFEEATGGTLLLDEISEMDVRLQSKLLRAIQERVIDRVGGTRPV
PIDIRIIATSNRNLADVVREGTFREDLLFRLNVVNLKIPPLRERPADILE
LAQHFAKKYADANGVALRPISAEARRVLSSNRWQGNVRELENTIHRAVLM
AQGDEIGPEAIISPDGDRLDLPKTAPAVAHATLAAEQVTRALVGRTVADV
ERDLILETLKHCLGNRTHAANILGISIRTLRNKLNEYADGGLPVTPAGSG
EFRAFVATA
>RPC_0595 HPr kinase
MTEPAASSSGSGTVHASAVKVGDRAVLIRGPSGAGKSRLAFDLMLAGRAG
MIPAAMLIGDDRVHLERRADGLVVRAAAAIAGLIEIRGLGLRRCDFVAEA
VVGLVVDLAAGDAERLPQPAALRTTINGVELPRIPVGESYEPLPLVVAAF
TTLEGSGLTTDEGDCSKRFDNHIIPTIVTK
>RPC_1386 two component transcriptional regulator, winged helix family
MTQFATLAKRPPCPADDAPHLLLVDDDRRIRDLLSRFLASEGYRVTTAKS
AADARSKLNGLYFDLLILDVMMPGETGFDLARFIRTTSSVPIVMLTARHE
AESRIEGLQLGADDYVAKPFEPRELLLRIGNILKRAMPVAAVKQESISFG
PYVYHLERGELRQGEEIIHLTDRERDMLRVLAASPGETVPRGELTGGGGT
VNERAVDVQINRLRRKIEQDPANPLFLQAVRGIGYRLVAAP
>RPC_4311 two component transcriptional regulator, winged helix family
MRILLIEDDTRLARQIAEALERAGYTVDRSADGEDGWFMGDSGVYDAAIL
DLGLPGLDGLSVLRRWRDAKRAMPVLILTARASWREKVTGLREGADDYLT
KPFEIEELLARIEALIRRASGHATAEISVAGLRLDPSTQRISRDGAPLDL
TALEYRALAYLMMHPAKVVSKTELTEHIYGQDDDRDSNVIEVLVNRLRKK
IGADAIRTRRGQGYQLADVTP
>RPC_4510 response regulator receiver domain protein (CheY-like)
MPHPAVQTGSAPTRLLIVDDDRFSLAIFEKMASSLGFITETSSDGAEAFA
MLRENPGRADVVITDRMMPVMDGFALTRRLKREPSTRGIPVILLTGSNVA
EDIAAGLDAGAFYYLTKPPSVDLVRSVVDSARKEVDRQRNVASKLSVHQS
AFVNVTVLRTLLKRPDEVEGVCSLLASLHAEPETIIQGIYELVQNAVEHG
VLGFGLEQKAALLAAGRWQEQLSSRCADAAYKGEVEATMVRREGHLVLSV
KDTGAGFDWRPFLAADPSRAGALNGRGISRANSYAFSKLAYNEAGNEVVG
VIQTTRTVGW
>RPC_3782 response regulator receiver sensor signal transduction histidine kinase
MSSDTIRALLVDDAEIEYRSLDRMLQKISTRRYRLDWAASFDEGLAAFRR
DEHDVFLVDFRLGPESGLDLIRRAREFGVMKPIIMLTAYGDAIIDAAATK
IGANDYLVKGEYDAVLLDRAIRYSTRNAQNLVDLNRSLAETGAVIRELKS
ETERRMVAEAEVSNVLRRTVAEQEAERRRITRELHDNIGQSVTLLLLGLG
SLARCTVPGCEAAEKVDGLKDIARRMSMDLHRLAWEIRPAMLDDLGLETA
IRQLTVEWSQHCDLSFDLFLSLGDRRLPHNVESALYRVVQEGINNVVRHA
HASRVGIILKAWDNVVSCIIEDDGGGIADRPAGPTSDTAFSGLGLIGMRE
RLALVNGTLDFESSPGKGTTLFARVTL
>RPC_1477 UspA
MFKSILVPIDLSDTDLTKPALDTAATLAKTYDASVRLLNVLQMTPVMLAE
YVPADFDGQQRQTSEQALAIIAQESGIAPGKISTAVRQGGVYHEVLEEAT
AVGADLIVMTSHRPAMRTYFLGSNAGHVVRYATCSVLVVRH
>RPC_3858 UspA
MKRLLVATDFSTRSDRALRRAVLLAHQYSAEMTIVHVIDDDQPPQLLRAE
EREISSLLHDLAATVREIDRVPCDGRVAFGEPFQAIAKTAENVDADVIVM
GPHRRQALRDIFIGTTADRTIRCSLRPVIMANAVPAGHYGSILLATDLSE
CSANAATKAQALGIFDRGGVIVVHAFDAPAQTMIVRSSMTANEERAYLAE
EENRAAHGVAEFLTRVGLRPSRSIVQLSEGSAPHAIKDCIRQQRADLVVI
GTRGRSAAAKFFLGSVAGELLGDSDIDVLVVPPPNEWAESTQASKSS
>RPC_0884 transcriptional regulator, NifA subfamily, Fis Family
MAMTASNAVAVETEQPVEEFTHCFTGECRVNVLPLLFQIAQIISDSEDLA
KTLTIILSVMQKQLRIHRGMVTLYDRGSETIFIHESFGLSEEEKARGIYA
SGEGITGKVVETGRAIVVPHLRDDPHFLDRTQSHGHGNTNASFFCVPIIH
AQKVIGTISAERTYRNSRLLRQDVQVLSTVALMVAPAAELYLIENIEKVR
LENENRRLQSVLKERFKPSNIIGNSKPMQQVYELIHKVAGTKATVLVLGE
SGVGKELVANAIHYNSATADGPFVKFNCAALPESIVESELFGHEKGAFTG
AVGLRKGRFELADGGTIFLDEVGELSLLMQAKLLRVLQEKTFERVGGSKP
VKVDLRIIAATNRDLLEMVAKGTFREDLYYRLYVFPITIPPLRERGSDVI
LLADHFVARNAADSGREVKRISTPALNMLMAYHWPGNVRELENVIERSVI
LSEDGVIHGYNLPPSLQTSAETGTNFGCSLGGKVQAVEYEMIVEALKSHR
GNVTDAAQELGLTRRILGLRMDKYGINYKTFRRGREARG
>RPC_2009 sigma-54 factor, interaction region
MIDGALLIDQDSRIVWLNEKHVWFSPKQMTLLGLGPDACAKAVGKPVESL
IPHSRMREVVETGRSIPLDVIKYGEHTLLVSRLPLRDQTGAVIGAISFSL
KNSVTLLRPIADRFNKLQSRLVLMEKKLAAARTSKYTVENLVGFSPAMLR
LKRLIRKGGQINSSALLLGETGTGKELAAHAIHAASDRVNGPFVGLNVAA
IPENLLEAECFGVAPGAYTGASHQPRPGKFQLAHGGTLFLDEIGDMPLSL
QVKLLRVLQEREVEPLGSNQVVKVDVRIIAATSRALPEMIKEGKFRADLF
YRLNVFPVHLPPLRDRKEDLEILASLFSERTAATFDQPMRNVTPQALELL
HAHDWPGNVRELANVIEQVYARTDGDQITADDFAEILPQIAPRLAAPSRK
RPLAEAVDEYERSLILTALTEAKGNKLETARKLGLARTNLYAKMSRHNIS
LDTQYGVAAEAEQRELGA
>RPC_3250 transcriptional modulator of MazE/toxin, MazF
MKLPDVGDIAWVDLDDTRGSEQSGRRPALVLTPLSFHQRSRRAVICPITS
KVRDWPTNIVLPHGLRTKGMIMVDQVRSIDREERLFETIEKVPPAIVREV
RIKLADLLGIETDGPPPSGLDRA
>RPC_1151 histone deacetylase superfamily
MTTLFINHPACLEHDTPYGHPERADRLRAVNQGLAEARFSALQRSEAPEA
DLDTIALCHTDHHIVELRQMSPQTGLIFVDSDTSMSPGTWEAALRSVGGA
VAATDAVMTGQVHNAFVATRPPGHHAEIGKPMGFCFFGNAAIAARYAQRK
YGIGRAAVVDFDVHHGNGTQEIFWGDKTVMYCSTHQMPLFPGTGAVGERG
EHDNIVNAPLQSEDGTAKFRAAFDDLILPRLTAFAPELIVISAGFDAHCR
DPLASLNLQTEDFAWVTQKLMDVADLSAGGRIVSVLEGGYDLQGLRESVN
AHVGALMGS
>RPC_0897 response regulator receiver domain protein (CheY-like)
MAVDLSMTVLVVDDYNTMIRIIRNLLKQLGFQDIDDASDGSAALAKMRTK
KYGLVISDWNMEPMTGYDLLKEVRADPNLAMTPFIMITAESKTENVIAAK
KAGVNNYIVKPFNAATLKTKIEAVFPDHVPA
>RPC_4611 response regulator receiver (CheY-like) modulated CheB methylesterase
MIRLLIADDSALVRKLLEGVFLEEGDFEIRTARTGLEALDMVRAFDPHVV
TLDVQMPGMDGLTCLGRIMLEAPRPVVMISSLTEQNADATLSAMALGAVD
VIAKPGGTFSLELDRLRPLLVATIRSAAQAKIRPTHRLADRIRHQFRDAA
SSPRAKAARRGAARQRAKAEPAPGLVLIGTSTGGPAALNILLPQLPADFP
WPVLIAQHLPATFTGAFAKRLDRECALNVVEVDVPRQLEPGTVYIGRGDA
DVIVAPRPSGLIALSVPARRDYPWHPSVERMVDSALEHYDGKRLLGVLMT
GMGDDGATAMTRLQALGGRTIAEAESTAVVWGMPGELVRQGGATLVLPVE
EIAAAVIEWGNADAAD
>RPC_4662 putative PAS/PAC sensor protein
MPTNVELFFDADDIIVSKTDLKGRITYANRVFCDLAGYSEAELLGQPHSI
IRHPDMPRCVFKLLWDSLNEGREIFAYVKNMSRRGDFYWVFAHVTPSFDA
KGRVVGFHSNRRVPERRVIAVLQPVYAALLREEQGHRNAKDGLAAGYRHL
TDFVTAKNMPYDQLVFSL
>RPC_1831 periplasmic sensor signal transduction histidine kinase
MRGSSLATRLFLSATAWVVVILAITGIVLSSVYRQASERAFDRRLNLYLR
TLVAEVATPDEPPERQFQSLGEPLFDLPLSGWYWQIARTDSEKPELRGSR
SLWDRKLSHLQDQGVELTAAGVRQGYVDGPEGQNLRMVERPVDLGADGKF
LVTVAGDATEIFEETRTFDYYLASTFLALSIGLLLTTIFQVRFGLAPLKR
ISDSIADIRSGRAERLEGEFPVEIAPLARETNALIDANRQIVERARTHVG
NLAHAIKTPLSVIINEAAAHPGDAFAAKVLEQADVMRDQVTHHLQRARIA
ARLTVVGTVTEVAPVIEALRRTMEKIHRERCIAIDVEAAAAAKFRGERQD
LEEMVGNLIDNACKWAEARVFIEVALQRAGSADPAAVLRIVVDDDGRGLS
AAERAQVLRRGQRLDESKPGSGLGLSIVTDLAALYGGSLKLSEAPIGGLR
AELLLPGG
>RPC_3132 PAS/PAC sensor hybrid histidine kinase
MWFRSIVDSASDGIIVVDASETVRVFNPACERLFGYTAPDVVGQKVTLLM
PGQDYLWQHRSVSSGFGRRKDGSIFPMDLSVGQTDFDHSIAFVGIVRDLT
ERRRAAQAMRDSERNYRLLVEGVTDYAIYMLDLDGRITSWNSGAHRIKQY
TASEILGKHFSEFYTQEERQHGVPEHNLKLAKRVGRCETKGWRRRKDGSQ
FWAHVVIEPLRNESGAPIGFAKLTSDITERRRAEQVIREADERINTLIET
VVDGVLLFDAVGKIQIFNAACQRLFGYHVEEVVGQNFKMLLDRSDDVELS
SLLGNEHKQAGTVRELNGLRKDGSSFPMDLSVGEARQDGEVVYVGVIHDL
TERKRTEQQLVQAQKMEIVGQLSGGIAHDFNNLLTVIVGNAEFLGEQLKT
RPDLRSLADDIGRAGERGAELTQGLLAFSRRQTLRPIEIDCNELLASMHK
LLRRTMREDIEVKTDFEDGLRALLADRAQLESAIINLALNAQDAMDGGGR
LSISTANVSLDDQYQSAHPEVRPGEYVLIAITDDGEGMPKEVLDRVFEPF
FTTKEVGKGSGLGLSMVYGFVKQSNGHVSIYSEPGLGTTVRIYLPALASK
SSELRRDVAIAPFHPTGTEVILIVEDDPFVRSYAVMCLRSLGYTVLSAVD
GNEALQLLGGDARIDILFTDIVMPGGTNGWDLAERAQQMRPEMRVLLTSG
YALETMAARARIRDGSVILTKPYRKADLARRLRQMIDDTTSLH
>RPC_1524 multi-sensor hybrid histidine kinase
MTSDANDDPPGDSLTNPEPPRRSGSIVLVLLIAAAIVAAAVAFMTLGRAA
AQPYIMGSLALLAMVGLFTLFAFAAGIVRFADRMADDPVMRPMADHAFDG
LAVTDPRGHVVYANHNYLTQTGAATLQDVRPVERVFIGNPDVSEAVFRLL
KAAREAKRHTEEVRVAGSEGAPGRWLRMRVRPLGLSKREAKFTVWSLADI
TRDRERQEDVFQELQHAIEYLDHAPAGFFSVDAAGDLVYVNATLADWLGH
DLAEIGSGGLKLNDIMSGDGASLLTSISALPGEVKTEVFDVDLRMRNGKT
MPARLFHKLAFGADGKPGASRTLVISRARDERADPQRTAEVRFMRFFDHT
PMAIATVDKTGAVVRGNARFAKLAQSLNPGGAVNKSVLAAVSDRERGQLS
DAIDLAAQGQGDIPPVEAMLDSTRERWAQFFVTAIEEDERDTEAAIVYML
ETTERRTLENQINQSQKMDMVGQLAGGIAHDFNNVLSAIMMANDFLLNAH
KPTDPSFQDIMQIKQNATRAATLVRQLLAFSRRQTLRPQVLHLGDALSDL
TMLLRRLIGEKVKLDLVHGRDLWPVKVDVSQFEQVIVNLAVNARDAMPAG
GKLTVRTANVSAQEAERLSYKGMPPADYVRIDVSDTGTGIPAEIVDKIFE
PFFSTKEVGKGTGLGLSTVYGIVKQTGGFIYVASEADKGTTFHIFLPRYN
ADRDVQPEPAAVAAAAVVEPKPEAKPRAADLTGQGTILLVEDEEGLRSLN
ARGLRSRGYSVIEAGNGLEAIDAIEAQHGAIDLVVSDVVMPEMDGPTLLK
EMRTRNPDLKIIFVSGYAEDAFEKSLPENQQFAFLPKPFTLSQLVAAVKE
TMA
>RPC_3523 diguanylate cyclase (GGDEF domain)
MHLSQLSISTKITAVITFLIFSMAGIGLVGLLKMRAINADAAAIQRIWLP
SVRALGELRSNVIVCRNIIRQHQLSDTVEAKQAAEVLLDAAVKTNDEARI
SYEALLGSPTERVLYAEWVKTWEAYLQGARQVLTLSRNSGGIASLETRKL
NMDTVGPIGDRADEILKKSIDFNNQGADAAGQEAVKSYQSAVVSLATFLT
IAVVIGGVAGIYIVRHVGSAIASNVTTMHELAAGHLDVVVPHQGENNEIG
TMADALQHFKLALIAKKADDDDAAAELRDRARRLAVLATTDRLTGLYNRL
KFDEALVAEIARAERFRMPFSLVIYDVDHFKVVNDAFGHPIGDSVLAGLS
DVVSSQLRATDTLARWGGEEFAILVTGSDGCFVAEKLRTAIAGVSFDRVG
GVTCSFGVTEYLEGDTPEIMVARADAALYQAKVKGRNRVELYASPESVSS
AA
>RPC_0094 two component transcriptional regulator, winged helix family
MSQNPNIIVVDDEAPAREMVGDYLKMHGFTVTLCDGGASLRAAIEIAVPD
LVVLDLNMPEEDGLSIIRDLKARTNVPVIMLTATASPIDRVVGLELGADD
YVAKPCELRELMARIRSVLRRSAPAKPAPAPVAAAVMPAKEHLVRFGTKW
LDLEAQALRDDDGNEHPLTASEFGLLKVFAANPKRVLSRERLLELANARD
AEAFDRAVDLRIMRIRRKIEADPTKPAVIRTIRGGGYLFSPSGERA
>RPC_3025 two component transcriptional regulator, winged helix family
MGSQFVTNGGSPGPRFAVERSDEIGQRRLMTEQTPQILVVDDDPEIRKLL
ARYVEGQAFRVLLAASCAELRQRLATEQIDLVVLDVMLPDGSGLDACRDL
RAKRNPIPIILLTALKEDVDRILGLEMGADDYLSKPFNPRELVARIRAVL
RRRSETPAPVGASRAYRFEGFVADPQVRSVVDPTGTAIELTGAEFDLLQV
FLDRPGRVLSRDQLLDFTRGRSDTFDRSIDVLISRVRRKLDPSGTARLLK
TVRNGGYQFVVKVEAVDMPS
>RPC_2479 putative GAF sensor protein
MERDVVTTSQAAKLLGISVRTAQLLVESGALTSWKTPGGHRRVYRADVMA
LMKQPNQPPAVSSAVVVLAAPDRLPLYEDILSTVRECSAELHSEVYQASF
AIGARLPAAVIVDLNEDGGERLAFVRSLESDPAIGHARVIVVGGDDDASD
GAAGPKRIPSPQLVPDALRAVLACATKSSAIDGPLPFPIAANEAQRLIAL
QRSGLVDTAAEKSFDRVTWLASHVLGTPISLMTLLTPSRQWFKSRQGLDM
VETPRSWAFCNQTILQRDVFAVENLALDRRFADNPAVAGDPHFRFYAGAP
VLDPNGFALGSVCVIDYEPRRLDRDQTESLRALAALASDQVRLRANDREL
RWAQNELSRARKH
>RPC_3799 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain)
MTAAEIESVTPLVLIVDDDRMQGRLIGEVCSRIGYRSMFAASYETAAELI
ATTSFSYVTIDLALGERDGIELLRLIAQLQVRPFVIVISGCEQRILNAAV
RLAHSSGVCDAVALPKPIELAALRKVLLTARCDCGAQQRPVRDQAVVTAA
DLDAAVGNGEIYAAFQPKLELSTGKVVGCEALARWDSPTLGPIGPDLFIP
LAEGSGAIKAVTLQILRSALQLAREIGRDDAEFVVAVNLSATLLSDPAIT
EDIGGLLQQLDVPARSLMIEITETTAMGDVSLAMDTLLRLRIKGIGISMD
DFGTGYSSMSVLAQMPFCELKIDRSFVGGCLTDPDLWKVVASSVTIARSY
NMKTVAEGIEDVATWQALAGLGCDAGQGFVFSRALPHDAFLAWCDDWHRR
LRSDGLAPWMTRRQA
>RPC_4547 osmosensitive K+ channel signal transduction histidine kinase
MADHRRNADQRPSPDALLDAARREDDGRGRLKIFVGAAPGVGKTFEMLQS
AHAKRKAGVDVVVGVVETHGRSETEALLAGLEVIPRRRLDYKDHVLDEMD
LDALIARRPRLALVDELAHSNAPGSRHPKRYLDVEELLSHGIDVYTAVNI
QHIESLNDVVAQITHVRVRETVPDSIFDRADAIELVDLTPDDLIQRLREG
KVYVPKQAERALEHYFSPGNLTALRELALRRTAERVDEQLLNHMQANAIA
GPWAAGERILVCINEDTRSAGLVRYTRRLADRLHAPWSAICVETRSAQRL
TEVERDRLADTLRLAEALGGEGMTIPGSGRHVADDVISFAHNNNVTQIVV
GKSTRSLWVELLRGSVVHDLIRRAGNISVHVIAGEELAADPVARKTVKTL
ERNDSFDPRPYLMAVLMVAAALGLAILIEPTFGVVNVDLVFLTAVVSVAV
RYGLLPSLLASVTASLCYNFFFLPPFYTFTIAEPTNIAAFLFFMLIALLV
SNLAGRVRSQAVSAIGRVRTTESLYAFSRKLAGTAALDDVLWATAYQAAL
MLHVRVVLLLPEDGRIVVKAGYPPEDQLDDADLAAANWAWSNDRPAGRGS
ETLPGAKRLFLPMRTGRGPIGVIGIDDDRSGPLLTPDQRRLLDALVDQGA
LAIERVQLVEDMDRVKRSAESDRLRQALLTSISHDLKTPLAAVLGAASTL
RDLSPKLSDAQRAELIGSIVEESERLNRFIANLLDMTRLEAGAVVPNAAL
HDLGDVVGSALRRAATILAHHNVQLDLEAELPMLQIDAVLFEQAIFNLLD
NAAKYAPLGTTITVRAARHGDAVLLQIIDEGEGIPPEDLETVFDKFYRVR
KSDQVRAGTGLGLAISRGFIEAMQGSMTAANRSDRSGAVLSIRLPVPPAR
AALDTAA
>RPC_4884 histidine kinase
MAVTSRQLRSGRTLVKRTAKKRARKPAPPKRRAPPRSDPGIVELALAAFA
HEVRTPLTGILAVSDLLATSDLDPRERRWVDTIKAGAEHLAGLATLFVDA
ARSSASGLGVREDFFDLRALARNAANSLAGRAAAKGLQATTRISDKLPAF
VVGDAIRLRAALENLIDNAVKFTEQGSVAIKVSTARAPKGKVGIVFAVSD
SGIGLTLTEIKRLFRPFSQANVTIAARFGGAGLGLSSVRQIARAMGGDIA
VAQRPGGGTTFTLTVALTRSTGALTLLPGADGESPEDRAAPLHLLSVEDN
PFGRVVLNAVLSELGHHTEFVGRGELAASRVAEGQFDAVLMDMVLPGISG
VEAIRQIRALPGATGRIAIIGVSGRGDDEAASRAAGADAFLLKPVSPRGL
ATALLEATRREAVAT
>RPC_2942 carbon starvation protein CstA
MSTLATKDNGILSKLLWAAVVALGVVSFGIVALSRGETINASWLVIAAVC
VYFIAYRFYGLFIAEKVLGVDPKRRTPAHVHNDGLDYVPTNRYVLFGHHF
AAIAGAGPLVGPVLAAQMGYLPGTLWILAGVVFAGAVQDFTVLFLSTRRD
GRSLGDIVRSEMGPVAGGIALIGVLLIMVILLAVLALVVVKALVGSPWGT
FTVFSTIPIAMLMGVYARFIRIGRIAEMSVIGVVLLLASLIYGRTVADNP
ALAAWFDLSGETLALVIIGYGFVASVLPVWLLLAPRDYLSTFLKVGTMAL
LAVGIIIVQPDLKMPAVTQFIDGSGPVWSGSLFPFLFITIACGSVSGFHA
LIASGTTPKMVENENQLRFIGYGGMLTESFVAIMAMIGATVLEPGVYFAI
NSPAGVIGTTAVQAAQVVSGWGFVVTPDMLNQLAQDVGEKTLLSRTGGAP
TLALGMAHILSGMFGGRVLMGLWYHFAILFEALFILTTVDAGTRVARFMI
QDMIGSVVPAFRKTESWANNLIGSALAVCAWGYFLYQGVIDPMGGINTLW
PLFGISNQMLAGMALILCTVVLFKMKRQRYAWVTIVPTLWLLICTLTAGF
QKLFSADVKIGFVAHAWKFSDAAAAGTILAPAKTMEEMHRVIVNDYVDAT
LTAMFIAVVLSMIVYGVIAIRRALGDPKITAIEVGLPTTVQGAKIA
>RPC_4625 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MPSIFSHPTIHLGKDAIAPCDDQSIDPNSITRRDPTRWLMLCGVLLISSI
VIATALIIDQFRERALQNSERELSNTALLLARHFDRELDDVAAVQDDIAT
QLQLSSPGGFAGMGTLNAHELLRAKLSGAHDVSGINLFDARGILINSSER
WPVPDVSIADRAYFGTLASGETREQSAIELVQGRLSQGWSLVLSRRLNGP
NGEFVGLLTRGMSPDRFEQFFASVALAKDSAVVMHHRDGTLLARHPHVEE
LLGKNFKTGREDQRRLFETPGLARLPSPIDGQERLVASHALTDFPLLMVV
TTTVSSSLADWYRQTRFLIIVAAGSTMIIAAILFLIIRQLTRQHRATQRQ
LTRDKQRLSTAINNMTQGLLLFDSSARLVVCNQRYMEMYGLSAEVVKPGC
SLRQILAERKAAGSFEGDIDAYCADTLSHVAARNVTVAVTPDGRSIQIAT
EPAPEGGWVATHEDITDRRRSEERIAYLAHYDELTSLPNRTSFRERIEDE
FERVARGGTLALLYIDIDEFKAINDSLGHPVGDALLKIVAARLKACLRET
DFVARLGGDEFAILQTAPRDVQEVTELVARLFETIRAPCECLGHQISTDA
SIGIALAPPHGTDTDQLIKNADLAMYQAKADGRRTCRFFEPRMEASAKER
RTLELELRKAIADCAFEIYYQPIVELRNGDVIGCEALLRWRHPQRGMISP
AKFIPVAEATGLINELGEWVLRTACAEAANWPAEMSVAVNVSPVQFKSRT
LPLKVAAALAASGLPASRLELEITEAVLIDDDETALSVLHELKTLGVRIA
LDDFGTGYSSLSYLQRFPFDKIKIDRCFIDGIARPDGASAIVQAVVNIAT
ARHMTTTAEGVETAEQRDLLRGLGCTHMQGYLFSPAIAPDTVRQLFAGGG
NAAGSRRSRADRARR
>RPC_3809 serine/threonine protein kinase
MSSVSLEPGSSIDGFLIEERIHQGGMATLLNVSRPGSTMPMVMKLPKIGE
GEDPAAIVSFEMEQMIMPRLSGVHVPAFVAAGDFSVQPYIVMERIAGRAL
ISRLPELPLPYADAVAIAARIATALADLHRQHVIHHDIKPSNIMFRPSGE
AVVLDYGLACSDLLPDLMQEEFRLPFGTAPYMAPERLLGVRDDPRSDLFA
LGVLLYFFTTGVRPFGETETMYGMRRRLWRDPAPPRKLKPDYPLWLQEIV
LRCLEIEPAWRHPTAAQLVFDLTHPAEVKLTTRSEKLKRDPWSTALRRRF
NPDLKQPRPKASLADELAAAPIIAVAIDLAEGSTALNDELRSTAERILAT
LPSARLACLNVLKLGRITIDKTLDEHGHNKHVDRLVALRNWAEPLKLADN
RLTAHVLEAIDPAAAILDFVQASHVNHILIGARRNSALRKLLGSVSAKVA
AEAPCTVTVVRTFGEKTPRVAVENEEVS
>RPC_3972 transcriptional regulator/antitoxin, MazE
MKIEIKKIGNSDGLLLPKELMQRLDLKRGQELHITELAGGGFQAMPYDPD
FERTMEIADQIMEKYKDTLAALAK
>RPC_4099 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
MAFWTRSSDAESAAQMQAISRSQGVIEFAIDGTILTANQNFLDALGYSLA
EIKGKHHRMFVDPDERDGAAYRAFWASLGRGEYQAAEYKRIGKGDREVWI
QASYNPIMDRSGKPAKVIKFATDVTARKIRGMEDAGKIAAILRAQAVIEF
NLDGTIITANDNFLGVMGYALADVVGKPHSMFVEPAERDSAAYRAFWAGL
NRGEYLAAEFKRIGKGGREVWILASYNPIIDEKGKVFKVVKFATEVTQQK
LRFTELDGQVQAIGKSQAVIEFAMDGTILGANGNFLDAMGYSLAEIKGRH
HSMFVDPSERDGAAYRAFWATLNRGEFQAAEYKRIGKGGREVWIQATYNP
ILDLNGKPFKIVKYASDTTARVIARIKSDRVSRMLESVADGAEKLNASVR
DIAEAMTKSKSTAIAAVTKVESADQQTQRLAVAAQSMGGIVELIGNITGQ
INLLALNATIESARAGEAGRGFAVVASEVKNLANQATDKIGSEISGLNGI
SADVVAALLAIKQEIQSVSEFVTATAAAVEQQSEVTAEMSSSMQQAAAEA
ASIGH
>RPC_1012 transcriptional regulator, Crp/Fnr family
MASKLTGGDLQIITRIAVFRGLKAETVAHMIAPATAIIVRAREPIVPQDE
PATAFFIVIDGWVKLFRSNVAGDESVIEIMTKGGSFAEAAALTGSRYLAT
AEAVTEARVARIPADHLVRCIRHNPDISVPMIASICQQMHYLVQRVEQLK
AQSGVQRLAEFLASLALTEQGACRLVLPYDKTLIAGELGLTPESLSRAFA
KLRSIGVTVVASQVAVRDVARLRKLAADGRSAVRGTLQVMR
>RPC_3384 multi-sensor signal transduction histidine kinase
MASVIAAYLKRAKTVSLSIRQLTFGSFLLLLAIIVATSIASVVALRHIDA
TFGELQRLQSVDDLAEEIERKMSEVRLAARDFVTDPGGQPGRVWEATSAL
NALLKKTRLELAPDQQQMIDGVAARLTKYREGIERITALIPRRAELIASV
PPLRDQFEAAVDALPDRAVAASLYRERSRIAAALLSNDLDGAERAAVKLR
SLTEASPALRGATLDYSDTIVSLAGVEREIVELDKQVLGAEGRQIGRVTD
LLRDLTARRGRVLSKDFARTLAEDKWQSIVFGTAGVLLGIFAAAYVVRRT
VGPLAAIAAAIRALAAGEKYTAIPAVEVENEIGDIARAAEVFRKTLVDAD
AAREAALHALAEQRHAEESYRKLFEGSIDGIYVTTPEGALVNANPALARM
MGYDTPGELIARIGDIANTIYVNPATRGHYRQIMDRDGFVREFEYQARRR
DGEILWLSDSASTVRDADGRVLRYEGAVRDITDQKRAEHAVAEGRRLLQQ
VIDTVPAVINVKDTELRYVLMNRYMAGVFGIEAQDAIGRTTADLMARYGE
RKTDANDKRVLATGEGLGFYEEDYVDCSGVMRQWLVNKLPLLDFRGDVER
IVTVALDIGDRKRGELEMRKAKDAAEAALKNLKETQNSLIEAEKLAALGR
LVAGVAHEVNNPVGISLTVASSLERKTAQFAAEVERGNLRRSSLSDFLET
SRDAATQLIANLNRAAELVQSFKQVAADRNYSDQRVFDLADLTEQVVMSL
KAGLRKQNLALSVDCEPNLAMNSFPGPYGQVLTNLFFNSISHAFPNGDGG
KVAIRVQESGDDHVEILFADDGCGMTHEVRRRAFDPFFTTRRDQGGTGLG
LHIVYSIVTNRLGGRISLNSEPGAGTEVRIVLPRVAPQELSSEARAAT
>RPC_4054 response regulator receiver domain protein (CheY-like)
MASAATIVYVVDDDFGVLGSLRFLLETDGFEVRTFRNGAALLDAVAENKV
DCIVIDYKMPTMNGIDLAKKLRARRIEAPIVLITGYPDESISARAAASGV
YHVVLKPHLEESLVNHIRGAMQESQAPNAGSGRDLR
>RPC_1355 multi-sensor hybrid histidine kinase
MAGFGKTLTVDWSRRNRWLASIGRSLISAGDEATVLDEPSEHEMRRIRAA
QIDGVTRLTPLTMTINVANAALVVLVFWNAASNLFLAGWMMLIAILAAWA
MASWLRVRSRPRTEASPRGISRLVLHAFLLGSAWGAVPLALFPIVRPEYQ
LIIACLVAGMTSAGAFCLSTVPRAGLAYTWIMVLASAVALFRCEGEGYTI
TAVFLLLYGIVLSRNLVAHGHLFMENLRAKLQLEHQTEIISLLLKDYQDN
ASDWLWQTAADGRLVDIPERFVEAAQLPLSQLRGATLADVLELLCPCERA
TVDGIIALMQQREAVNDAVVHIMAGGQPRMWSVSAKPTFDHNGKFAGYRG
VGRDVTERWRAERAEAENRAKSEFLAIMSHEIRTPMNGVLGLANMLLETD
LDPEQHHAVETIRESGDNLQRILNDILDLSKLEAGRFQFETVDFSPAALV
EAVCSVVRSSAKAKGLEIERAIDPGLPKGLNGDMARIRQVLLNLASNAVK
FTDRGRVTIMANCVSQADGRAVVEWRVADTGIGIATDRVGQLFSDFAQAD
VSINRRFGGTGLGLAISRRIVEQMGGAIDVSSEQGSGSTFRFSLNLPISD
VVVADPRLDRVGADDLRLRIAMLGRPLRILIAEDDKTNQLVVSKMLQEFA
ADIRIVPDGVDAVQAVAEADYDLVLMDVRMPRMDGLAATRAIRAQGGAAA
ALPIIALTANAFAEDVEHCREAGMTDFIAKPLRKSVLVAAVLRAIRGGAK
PMSALQADPAAAGLDPPMPPEAALAQLIVELGHDQVLTMTEMFISETERR
LELIRRFVEGGDRGEIGLEAHSLKSGAKFLGFEDIANIARTIERRAEQMS
ARALHELGRQLDVALQEAKRELQDGGALRRAPSSTQQPPPISPAA
>RPC_3131 response regulator receiver domain protein (CheY-like)
MPRILLVDDDPLIRSGVRAWLEAENHQVVTAECGVTGLNALHGATFDLMI
VDIFMPHMRGFESVRVFHQSAPQVPLIAISGYVFAEKRTPAPDFLAMALE
LGAARCLRKPFLPSTLLTVIEACLQEHAAPTLHIASAR
>RPC_0597 two component transcriptional regulator, winged helix family
MPTIALVDDDRNILTSVSIALEAEGYRIMTYTDGASALDGFRTSPPDLAI
LDIKMPRMDGMETLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIR
KPFSQRLLVERVKAVLRRAAPKDPAAVPKETDAKALDRGLLRMDPERHTC
TWKNEPVTLTVTEFLILQALATRPGVVKSRNALMDAAYDDQVYVDDRTID
SHIKRLRKKFKVVDDDFEMIETLYGVGYRFKET
>RPC_4603 PAS/PAC sensor hybrid histidine kinase
MSEGNSEFDVAAVVDALDVGVIVLDERSGIVGWNDWIARVSKLPRSDALG
SNLIALFPNLGGTRLPSVIADCLQTGSSSILTHSLNKLLPLQNESGEELL
HNIVVRPVWSNGAPRCMLQINDVSVPVARERVLRERQNARYHAIVDSAPD
AIITIGLDRTIQWANGAAEQVFGYELSELLDHKLDMLLEHDDDGLVQAFV
DLQHSNSCTLQVNGRRKYGELCQFEVSLGRWKADERVFITTIWRDVTERT
TAEAALRDSEGRHRALLEALPQLVWTCDQHGECDYFNPQWQAYTGAPFGE
HLGSGWLKAIHKDDSAAFTESWAAALADGGVFDVDARLCRKDGSHRWFKL
RSIPVLTPDGSISRWFGTATDITDHVEARESLRRSNEELEALVQERTRER
ELALNQLHEAQKMETIGQLTGGVAHDFNNLLAVILGSLSLLKKWLPDDPR
TSRLLDGALQGAERGATLTKRLLAFARRQELKLEAVEIQKLIPDMMDFLR
QSLGPNINISIDIPPDVEPVKIDANQLELALMNLAVNARDAMPSGGALVI
TCRNDGAASSERPKGLPDGDYVCISVADTGEGMDQTTLAKAMEPFFTTKG
LGKGTGLGLSMVQGLTAQSGGAMTMSSELGDGTVVNLWLPRARREDMIHP
ATALAPLARDAASQQLRILLVDDDPLVRMNTAYLLMDLGHSVMEAQSGAQ
ALQLLGSDARFDVLLTDYAMPGMTGLDLATRVKIVKPKLPIVLATGYAEL
PPDALLGFPRLGKPYTQEQLAESLEAAIRERVN
>RPC_0535 BolA-like protein
MSAKHDITKKLSGAFTPQLLDVIDESHLHEGHSGHRHGGETHFRVNIVSA
AFAGKSRIERHRMVNATLAEELAGQLHALAIKALAPGEAGI
>RPC_2698 diguanylate cyclase (GGDEF domain)
MSLDISTLYLVATLLAALLGGMLMYFGKQENIAALDWWGYAYLLGATDVA
LWALASPALPETFAQAIHALGFIACGMVWNAARVFHGAKPNWPGLLLGAL
AWVAATVSLPPDAVALRMTLGAGIVAIYAGLTAAQLGSERRKAVQRRWPA
ILVPLLHGGVLMAPILLADLLTPAGRPITSNVWVTIFAIELVLYAVGTVF
VIFMLVSERTVRAHKTAAAIDPLTGMFNRRGFSEATTRMIAREADAGRPV
TVMIFDIDFFKSINDRFGHPAGDELLKLFATLVTNTLRISDLSGRIGGEE
FAALLPCSMDEALVAAERVREAFETCGIVVDDAPVETTVSIGVAGGPPRT
ELEVLLAAADTALYQAKRGGRNRVEAAMEQPLVPELGRRKSVVAVKSPAL
PRQVGLAGAA
>RPC_2018 periplasmic sensor signal transduction histidine kinase
MPKSPFLPTVAALRWLAFKRIHRSIAVLAATLIGVVTTIMLICAAVLVIR
LGGDDDGTWGAADVGDALKEAVARDDQGQLVVRKTARLEVFARQFPSFWY
IVSDKMGEVRYGPIPDWRPPKNAQHQSGTSFLAYAIDGESKTLKKMTALR
NTPVGEIWIETGGVAYTASQLMVGTLTDSAFIALPVLLVLLATALTALVF
VPWVIARPVLVVARNAEMIDGVPDGRRLPEDGAPAELLPLVAAFNRALSR
IDVAAKAQRSFLSNAAHELRTPLTNARTTIEQVQDPRLRARLIAENQKLS
SIVTMLLQLARISAEAAALTGIDLVALARRVAAEHVPMALKHGSEIAFVG
PGCPVWVQGSDPAIAVALSNLIRNAVQHSGAIHPILVSVDTPASLSVVDR
GSGLRCGEPEALWEPFKRGNAATEGTGLGLSIVSQVMSTHNGSVAICETP
GGGTTVELSFQVAHQAKPPPSKSRQVVPVLSGASTKIL
>RPC_1847 multi-sensor signal transduction histidine kinase
MARAQAASACAQSDSIKGLAQSIAKPAYHRLLTAEPALRRAVPTLIIAFL
ITICFGASVQIIDQTRQKRTATNRDLAALADLLAERIDRAGSPRQQDRAA
SIGRLQGLLPGLVPAWGIAVGRYIIVVGADQSILARLPVDVPVGDATRIL
EVLSATQPLTASAPQSGITDIALPDGRTAIATQRVIRSLPGQVVIIQENV
EPIWRSDTALSITLSATTGFVVLILGFAFHWQSTRAREGDLINDAVRGRI
DTALNRGRCGLWDWDLSRGRIFWSQSMFTMLGLESRSDLLTFGEVNALVK
SDDIDLFAIANQLITGTISQIDHTFRMQHANGHWIWLRVRCELSQGAGDA
GTHLIGIAVDITEHKSLAERTVEADLRLRDAIETIPEAFVLWDAENRLVL
CNSHFQRLHKLPDSAVTPGTSYETVVEVGTMPEARTRLPEAGHHPPGART
FEAQLDNGKWLHISERRTKDGGYVAVGTDITRIKEHEQKLVENDLRLRAT
VVDLKRSQATLERQAVELVDLAQKYSEEKNRAEDANQTKSKFLANMSHEL
RTPLNAIIGFSEIMGSGMFGSLGSEKYQEYCHDILTSGHYLLEVINDILD
MSKIEAGRMKLDLEPFDLATTLSESLRVVSGRADNKQLMLRADIDNDIPV
LADRRAIKQILVNLLSNAVKFTPDGGRVTVRGRVFEEQIVLLIADTGIGI
AKQSLRRLGQPFEQVESQLTKTYHGSGLGLAIAKSLTNLHGGSMRLRSQL
GVGTVVRVALPRDAAKAGDKISAAA
>RPC_4475 transcriptional regulator, NifA, Fis Family
MVYREAHVADAEESRPTTLIPLSEIALTGIFEISKILTAPARLETTLANV
VNLLQSFMQMRHGTVSLLADDGVPDITVGAGWNEGTDDRYRARLPAKAID
QIVATSVPLVVENVSSHPMFSRADADALGASPEVRVSFIGVPIRIDSRVV
GTLTIDRVRDGRSIFRLDADVRFLTMIANLIGQTVKLHRVVARDRERLMA
ESHRLQKQLSELKPPRERKKVRVDGIIGESQAIRGLLAKVGIIAKSHSPV
LLRGESGTGKELIAKAIHELSSRANGPFIKINCAALPESVLESELFGHEK
GAFTGAIASRKGRFELADKGTLFLDEIGEISPSFQAKLLRVLQEQEFERV
GGNHTIKVNVRVVAATNRNLEEAVARNEFRADLYYRINVVPMMLPPLRDR
ASDIPLLASEFLKNFNRENERDLEFDPASMELLQGCSFPGNVRELENCVR
RTATLAPGPAIHQDDFACHHDECLSSILWKSHSERTAQRPPPEIPLAVAP
IGRADGPRGNVAAPAPTVPTPQPPARVEAASDAQMSERERLVDAMERSGW
VQAKAARILGLTPRQIGYALKKYDIEVKHF
>RPC_4696 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MLLSAPTDVADEVARRQAWYGGDAAPGAELAALRDIMQALPAAVTLQDAQ
GRFLLANDAAAAQFGLSAAQLRAWSPSAALPTDALEQRRSLAIDLLNSGE
SLVCEENIGDGYGLRIFRTAHRRLDIAGAGLLLSSSVDITDQKQVEQALF
QRAYFDELTGLPIRGVIETRANALLQNDPDAGFALAFLDIDNFKHINDYY
GHAVGDALLIGVAKRLGLQLRASDTLSRISGDEFLMLLTPVQSQSEVIDD
IEFLQQRLRAPFYIDGSEIFASASIGISLYPEHGRSFETLRQNADIAMYQ
IKNATKGGAAMFDVAMEREALARTKVEQALRLAILDKRFCCAFQPKVDIR
SREVKGIEALVRLRDDNGVIQAPGTFVDLAVELGLIDELTHLVLSEIMKS
IDLINDTFGAGVSISINVAAKQAGNPTFMRSFSEALEATGCPERFIVEVT
EDAFVAKSHFQTEILPMLRRLGVGISIDDFGIGYSSLSALADITADEIKI
DRSFITDIHKRPRSQGILKAIESLSEALGMTVIAEGLETFEELAYLQAAT
RIRYAQGYYFSRPIFLEELKATHAISRETRTAPPARLPEPARASVIRSSG
QRR
>RPC_0280 two component transcriptional regulator, winged helix family
MPNARKILIVDDDNDLRDALVEQLSLHEEFEASAVDTGAKGVIAAKAESP
DLVLMDVGLPDTDGREVVRSLRKGGFKAPIIMLTGHDTDSDTVLGLESGA
NDYVAKPFRFAVLLARIRAQLRQHEASEDAVFTVGPYSFRPGSKMLTGAN
AKKVRLTEKETAILRFLYRSGLSPVSRETLLQEVWGYNSGVTTHTLETHI
YRLRQKIEKDAANPEILVTEAGGYKLVP
>RPC_4627 multi-sensor signal transduction histidine kinase
MRLRSHTATGWAAWLLAAALAMCVVATVALAYSLMQIRDNSSWVRHTNDV
LRLIAGIERAVLQAESGERGYLLTHVGEYREAYENAKAALPHAIDELATV
IGDNDEQQHNLATVRSSIEMRLAQLQRVVELAQDDLQTSLAILEQARVDL
LTQRIEQGLSTMTKLEQALLKERQRNFERSNFTAAAVATCLVILALASGC
VGAFLIERQRTMARQQASDNRLRELQTELLHVARLGTMGEMSAALAHELN
QPLAAIANYLKGSRRLLQDSSDKSAERIRNALDKAAEQALRAGEVIQRLR
QFVSRGETEKSNERLDRIVDDALALALVVAKDRAVAVSLSLDPSAQHVLV
DKVQIQQLLLNLIRNALEAMEHQTPRELKISSTRCDDGMIEVTVADNGPG
IDPELADRLFLPFMTTKSTGMGVGLSLCRTIVTAHGGGIQAEPQPGGGTA
FRFTIPGAAPS
>RPC_3125 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MTAAKKLSSKFDTEKFGDIPVLKRKWRAALKPGQTLPRYEDVMLGSLGRL
ADHIVLLKGEGASLAVSRSGRYIQEWLGQDAWDVPLGDLPADCATALAEA
AACGLQTGKPYLAVAHCVRAGMVRTYDVVALPTASRWGEKLIGVYVNERG
AQYNLLDAIFSSTDDGILSLAAIRNADNRPFDFQIVHLNEGASRLLGEPS
TALQWSRLRAGGHLLCSPMMVARLLNVISSGNSDVLEIDRGQQTIRLSAT
AFGDVVSLTVSDVTSLKKREDSFRLLFDNNPMPMWVFDAKTTEFLSVNDA
AVQHYGFERESFLRMKLQDIWPEDEREVHLRSVLQVGDTHYSGRNWRHLR
ADGSEIEVLTFGRQVAFEGRDGFLVAVVDITERRKAEAKIAFMAHHDGLT
NLPNRGSYQEHLHQALELSRRCNSKVAVLCVDLDLFKNVNDSFGHPTGDR
LLQKVADRLRQQVGGNDLVARLGGDEFAIVLGAINSPNEASDFAAKLIEI
LSVPYDMDGPEVVIGASIGIALSPGDGDDGEELLRNADMALYRAKAEGGG
THHFFEREMDRQAQKRRDMEIDLRRAFTKGEFELYYQPLVNLAEDRITGF
ESLLRWRHPERGMISPADFIPVAEDIGLIVGLGEWVLRQACAEAVKWPSD
IKVAVNLSAVQFRCRSLVQVVIAALAQSGLSPTRLELEITESVFLADTEA
NLATLHQLRELGVRISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVKDLAD
RPDCLAIVRAISGLGRSLNITTTAEGVETLDQLDWLRAEGCNEVQGYLFS
AARPSGEINDLLLRFGARASEAA
>RPC_4924 histidine kinase
MRARPPEHQIRPIGPPLPGPAESSWLALWSDRLRHSAIVLLMAGLVLAAM
VLFAGLAPARAVAGFICIVAAALVPWRLHNAVDTREEQLGVNPVHTAVVR
AVVAGMPDPAVLLDRAGRVIHLNAAAAQLAPALRANEFAQFALRSPEFVT
ALREAIATAQPRRATYLDPVPVERWLELIITPVPVPTAFDGTEQCMLMTF
HDQTPLRRVEEMRVDFVANASHELRTPLAALSGFIDTLLGPARDDAKARE
RFLGIMQTQAKRMARLIDDLLSLSRVELSAHVRPDSLVDIVPLIRQVIEG
LESLAKERQVVIETELPAEAAMIAGDREELLRLFENLIENALKYGASGGR
VNVSLASAASAEGTSEYRFVVRDFGPGIAPEHLPRLTERFYRVDVGDSRA
QGGTGLGLSLVKHIVNRHRGRLLIESMLNKGATFTACFPPGKS
>RPC_0283 diguanylate cyclase (GGDEF domain)
MTMSHIGFYRKKAKFKGIFGIRARLVLLALILVGPLMVERIRSLEDTRVK
QVSMASSELSALAERTAASQREIISSVEAVLKSSAYIHASASRIGRGCAT
LRASLRVDLPSIRMLMVAGPDGVVRCSTSTMFVGLNISDRSYFKKAMESH
DFVVSDFLVGRQTGKGTILAAYPVSAIDSGEEAVLVAGLNLDWMSGVMGN
LGGRPGVTAALVDGDGIVLATPPDQMSLVGQPFVGPAQPVSPGLNDLGAE
ERAFSGEAPGNNRAVYFAPIRGTTARLVVAVDEAKVSAGINRDIRTAYLQ
LFLVCFIVLLGALIAAERLIVKPVNMMTEVAKKFGQGDWSARVCRKRLPA
EFVPLARAFNAMAAHLVERERGLVAINNRLTVMASIDVLSGLANRRGFQS
RLDFEWMKAEQNGTDVGLLMIDVDHFKPFNDTYGHPEGDACISRIGETLA
AIANDIGGFAARYGGEEFCLLLAETDRASEVGEMVRSAIAHLAIPHRTSV
FQQVTVSVGVACTVPHPANSPRDLIEAADAALYAAKHRGRNAVVEHGFIR
GSDSGLSMAS
>RPC_2207 diguanylate cyclase (GGDEF domain)
MASFLQSQLDFIYFFYGMVFILLGAAFLAIARAGLGGTVGLWPFGFFALV
HGFAEWFDLAALILGDNAPFQAVRLALLTTSYLFLIEYARRGAIGLGFKQ
PDSWVYFSLVGLIIAAGVLGGLPTANVAARYGLGLCGTLGASLVVALRAR
QHPPFSRRLLTAFAVVLAIYGVTSVLMVAPAPFWPASVYNWEWFVELTGT
PIQLVRGVLGGALTVLCWAFWGQILVETVASARYTAYLRRQFVWTMIVLV
LIFAGGWGLTSYLGGIYQRNVESEARGDSELLVSRLTGEAAVLDAMVKAL
ARSPVLLPMLNGGGGAQDQHIDEVLQRDVEAAGALVGMVLNRSGTVIASS
DRRQAATLALPNESAAPYFQSAIAGLASSHVEFDPVSGMRSYTSSTPIRD
RDGSVVGVAMLKKSLDRLEASLLSFDGEFYFVNDDGVVMLSNRAEMLGRA
LWPRAVDELRLAKPSPAAKTMMSRAIVDSVWTTADGVPAYVLRHTADEGG
WSLLMVFPVTGIFPTRFLGIVITLQFSIMALFYFYGREHGIRDSIHTEKR
IELQELARGLQVQATTDPLTGMFNRRVFNEGLAAELVRFNRQQTPFSSLL
CDIDHFKEINDVHGHLMGDQVLVHLSRILSRSVRQTDFLARWGGEEFGIL
LVGADQTAAVEFAEKLRTTIAYTVFDDVGNLTCSFGVAECVLGDTPESLL
ARVDNALYRAKMNGRNRVELAPPPLTEAPALAPTG
>RPC_2203 cyclic nucleotide-binding domain (cNMP-BD) protein
MPRGATFPGPRDSVSGNGSPMDSPHIAVQAGTFFASIFVVATTTMRTMIP
LRVFGIITNVILITTSIFSHAYPTLLLHAVLLPLNGYRLHQMLQLVRDVK
KSVNSDLSMEWLKPFMTERCCEAGEVLFYKDEKAEDMFYIVSGRYRLVES
GIELPVGAIVGELGMLSPLNERTQTLECIERGTVLGVSYRQVEELYVQNP
EFGFYFLRLASARLFQNIGRLEQRLAEYTVQTPAPAAAPAPAAQGSA
>RPC_1734 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MSDDVSQIDTKVRALRRTVNAIALSLVAAITILAPLGYGLIDYRYEETHA
SFRAKLSASRVAQYIYQHSQLWQYQTARIAELIRLTELPDNAGRYRVIDQ
AGKVVLSEDAVAAYATMTRTVPISVAGVSIGRVEFTVPLDSMIQRLGIAT
LLSLLLALCAYATIRIFPFRVLDRALEGLDSAHRMIVDKNAALEQQNHEL
MEREQALRSTKAMLRQRSEQLLEAQHLGKIGDWSFRLGDKTLWWSPEIYQ
LLAYDPQSFRPERNAVTALYVGDSARRLQQAQAEVMRTGLVNSVDIKVKR
GDGSIGDLAITSKAMINADGGIIGLSGTIQDISARKSAEAQLEKLAYYDP
LTGLANRSLFHLEISELMVRNRRTGSDAALLLLDLDGFKEINDTLGHGAG
DELLRKIGQLISQALGPGNFLSRLGGDEFAIVLSHPTPRSEIEQLATTLL
AAIAGPIALERGEAAISTSIGIAMIPRDGSTLNEILRSADLALYRAKEDG
RGRYRFFEAGMSAAVQHKMALSRDLRAAITDNVGLSVHYQPQIELSSDRV
AGFEALMRWSHPTLGSISPAEFIPLAESSHLICDLGLWILREAATQAKRW
LDAGEPPRDIAVNVSAAQIWHTDFVSDVVRVLEDTGLPPHLLCLELTESL
LADHAEGRVRNVLMQLKRLGVTLALDDFGTGYSSLGYLTQLPFDKLKIDR
VFIDGIAGSERSRKLLQGVIALGRGLGMTLVMEGVERAEEVDILLEFDCD
VVQGFFFARPTVAATALDFARAFDGKVERRAGAGFETAARAAVG
>RPC_3757 two component, sigma54 specific, transcriptional regulator, Fis family
MDAFASEGRVAERNRGRSMTATVLVVDDEVRSLESLRRVLSDEFEVICAK
DAAEARRCLESEIVHAILCDQRMQDETGVEFLKHVRSTWPDPVRMIISGY
SESEDIIAGINEAGIYQYVAKPWHPDRLLDTVRGAVELFRLQQETETAAV
DMKLAPERVTRVVTEKRGAARQLYDFDRIVHAPDSPLRGVIDLGRRAAEY
DISVLITGESGTGKELLARAIHYGSGRAGKAFVVENCGALPDQLLESELF
GCKKGAFTGAYQDRIGLFEVADGGTIFLDEIGETSPAFQVKLLRVLQESE
IRPLGAQRVRKVDVRVVAATNRDLEAEVRAGRFRRDLYYRLAAFPLHMPA
LRERPMDIPLIAAKVLADVNKSYGRQVAGIARDTLTAMQRHDWPGNVREL
QNEIQRMVVLANDGRLQSKDLSNRVRNAGAPAEPSRAADGEAATLKHRVE
ALERAMIADALQRHGGNISRVAAELGLSRVGLRNKLGRYDIRKGVVDAD
>RPC_2611 conserved hypothetical protein
MSHQGPIILVSSPTPAALTAALSDANLFPVIDAAWSEVAEAVERLQPAAV
VVSGDYEERAMAALAGQISAKQPYIPLIVTDPSGPLPRNAISFASLEGQF
DRLVPRLRAALRVRTLHATVLRRIAADPELRGSLARTDPLDEATVLLIGR
GSGYPALSVALGERLGVVGTLSIEGAARHLNARDLNGIILGEGFSPRVVD
AFLTVLSEDARFRNFPILVTVPGVTAGYDLPNLELASGDPLRAVDDALPL
IRQHAFEARLGRTLQSIDAGGLLDPRTGLLTVAAFDRDFATAVYHSHDRG
SGLSVAKFAFDQNDDRVLMDAARIVSRLMRKMDFGTLQDDGSIIVVFAET
DLRNAHAIARRLSSVMRQTSHSARRESRIDPTVTVATLLPNDSARAVLGR
LSQDGRRAAS
>RPC_2870 multi-sensor signal transduction histidine kinase
MVTQARARQRSLLQIVLLGIAFAVLVVISIASVYWLQRAREDAAWVAHTL
EVENQISLSLLQMRRAESAERGYLLTQQPGFLEDYEESAGGILPLLRKLQ
EQTRDNPSQQQAVIEIMAMTEARLAQFRRVLELGHANKLDEATEILRVNT
GRDTMNRIRVLSEEMSAEEHRLFRERTIAADRSQALAAIVTTSGSALVLL
LAAISIFLVRRSAAARDEAETRLRDTNLNLESTVLERTADLREANDEIQR
FAYIVSHDLRSPLVNIMGFTSELEELRTDIFRRIATLGRAASPDPMPENA
DNDAAPKLDAADQQLSQDFTEALGFIKSSIAKMDRLISAILNLTREGRRE
FKPVLIDTRELIEGIVSTVAHQAAEAEAEIRIEPLPQIVSDRLALEQIFS
NLIDNALKYLRKGIPGDIRIRGRQKLGFAIFEVADNGRGIDPKDHQRIFD
LFRRAGTQDRPGQGIGLAHVRALVRRLGGTMTVSSELGTGSTFTITLPAK
WSAANRDSQA
>RPC_4654 two component transcriptional regulator, winged helix family
MVAIPNILVVEDDRETRALIAKYLRANGCHVTAAADGHEMHKVMADRRVD
LMIMDVMLPDEDGLSLCRKVRAKSQLPIIMLTARGEDVDRIVGLEMGADD
YMVKPFNPRELLARINAVLRRQASALNASSAATAAATAFAFDGWRIDFRL
RELRNPAGARVALTSAEFDLLRAFCERAGRVLSREVLLDLTQGRNSGSFD
RSIDVLVSRIRRKIEIDPQDAMLIKTIRSGGYMFTPVVEPLLAAPTAEP
>RPC_1178 histidine kinase internal region
MDAELLLEDLISVDALQKVQDNFSAAVGIAMIMVDAAGAPVTKPSGFSAF
CQAVRTSADKRDQCFHCDDEGGRIAMAKGEPSIYRCHAGLVDFAAPIVVR
GQYLGAILSGQVRLRDESAIPVDYIHPPDDWWRQDDRLRALREKTTEVAY
QKLRAAAFTSFHLATYLVEESYAKAVSEELGAENLRLMAESKRRMELEKL
LREAELQALSYQVNPHFLFNVLNTIGRLALKENAKQTETMLYAFADMMRY
VLKKSRSQIVSFHSELEHVQNYLNIQKVRMGDRLSFTLNVHQKYGEIRCP
FMVVHPIVENCIHYAIEPKEKDGWIEITARDDGKDMILEITDNGDGIAPD
MIPVAISGVADHHGRTSIGLHNIDSRLRHFFGDDYKLKVESRRSRGGGTW
VQMRFPLKFDGFHA
>RPC_3029 two component transcriptional regulator, winged helix family
MHVPQILIVDDDLEIRKLLARYIKEQGFRVQLASRCADVRERIATSQIDL
IVLDVMLPDGSGLDLCRDLRSERSKIPVILLTALKEEVDRIVGLEIGADD
YLGKPFNPRELVARIRAVLRRGQDDRSAHGGRERYSFEGFVADPFARSLV
DPQGRDIELTGAEFDLLRTFLDRPGRVLSRDQLLDLTRGREPDATDRSID
VLVSRLRRKLANSGLPHLFKTVRNGGYQLVAKVNYLED
>RPC_1873 multi-sensor hybrid histidine kinase
MFKHSLAKLVLVLHWTSILALVTITSLLAAQEWFAFVDADRIVVLTRADR
VLFNSMTGIRFEVGVAGVAVLSRDQPDAMVEASNRKVDGLFAEAMAAIDA
SKLERRDALLAASRDAYADLERSRPLLSAITAQPLPARDMATADPWLMAM
YNVAERLQEASIAVGNDARMLDSEIAELVQLRQASYVIRERYGRPCSALR
ANVQRSLPLDREKLANWREGVGEYTARWRYLESYLSRPGASPQLVEDVIN
GRIATEIVQKRMDEVLYGLDGSGLPAMPAAEWSELCVTAYDPILKLGNDA
LDQAIAHAEDRKTRASLMLLAMAVVAVAGILLVGFWIQTVRRRLSTPMKM
LVDTIGRLSRQEFALPVPATGYPDEMGAMAGALEELRVGALKAQHLQRLL
EKAQEVEIERANEVSRAKTDFLATMSHEIRTPLNGILGMAQLLDDSPLSA
QQRQWLDAVAQSGSLLLAILNDILDLSKIEAGRMELESIAFSPDELLRTI
AAAMTPQAAGKGLAFLTEYPALPARLIGDPAKISQVLLNLVGNAVKFTHS
GEVVLSVNWAPDEQRPDRGRMEFRVTDTGIGIARQAVPHVFDPFSQSDSS
ITRRFGGSGLGLAICKRIIDAMGGKITVESTLGCGSVFTVVLDFAIARPS
LRGAATTAAFEAMPQLSILLAEDNEVNAAVARAMLEKMGHTVDHASHGLT
AAALAGQHDYDIVLTDLAMPGLDGIGLAKAIRGLPHATRREVPIIAITAN
VSAGRIEQCFAAGMTGYIEKPFRQETLRQALADAVGALEDEGVPQSARTG
SLLEQRCDDLGEEKTGYIIDLFVSTAPSLLAETSRALQAGDARAFGDAAH
RLKSAAGNVGLNHLARLAQLAERAAAANDHGAMRRCARAMAAKAPGKIEG
LKRSWAAVLSARARRTDNPSRAR
>RPC_3375 cyclic nucleotide-binding domain (cNMP-BD) protein
MLTRSPNQFLASLPADDFAQLQPDLRPLRLVQDEVLFEAGETLTAVYFPH
SGIISKVVHLSDGSTVEVALIGHDGVCGGAAVLNGGISPTTATVQFPGSA
SLIDSRRFIAAASRSETLRLALMKLQWIDFVQAEQLAACNASHDITARLC
RRLLRLRDLALSNTLPLTQDLLARMLGVRRNSVSLVAGALQHAGIIRYSR
GQVEITRVDGLAELACECYATNKSHADALNRRD
>RPC_4614 CheC, inhibitor of MCP methylation
MASDDFNPLTDLERDALAELSNIAMARAASSLRQMVQHQVLLSVPAVEVL
TQAAAAKIVAMPERASLVAVRQDFSGAFSGRALLIFSEANSLELVRAVVG
PKMTLEDIVDLEDEALAETGNIILNSWVATIANILKRALRMSLPVVVRGD
GRQMFDSPGRPDSLILFLHINFEISHKPISGYVALVMDIPSFGELRVLIG
DFVSNIAQSAGANERRR
>RPC_3208 periplasmic sensor hybrid histidine kinase
MLKAQRDSIRLLRGILVASVVLPTALFCYASWLGYHNITTIADRQIDQTR
DVITEHALKVFESVERSMAEITEIVRDQSDGQIMDSEAALHQRLKRISAG
SEQVKSLWIFDSHGRALANSLSHPAPPIDFSDRDYFSAHGERDIGTYIGE
VLRPRPPYGGAPFFGVSRRRPSSDGSFAGVIQASLLPDYFEGFFAKISRE
FGSYAALVRNDGSILARQPAIGRNVSVGANSDLGKLMLARNVEGTLTMTS
AVDGLERKLAYRRLSNFPVYVVSGMETRAIRAKWLAMMGSYMIFGLPATA
ALIALVMLALTRTQRLYEEASRRESAEQALKQAQRLESLGRLTGGVAHDF
NNLMMVVGGSAQRLRRRHDDPQDRRALDMIDSAVNKATTLTRQLLSFSRR
HAVSAKVVDLAESVHRFSDVLRQSVRSDIAIEIERPAGPLPVRIDPNEFE
IALLNLALNARDAMPDGGRITISIKRRIDGKTPAGAAGDLVVLTFSDTGS
GIAEDIRERIFEPFFTTKPVDRGTGLGLSQIYGFVQQSGGAITVDSELGR
GTRFELAFPISNETPHRDADPAEQSPSRLPQPTTLLLVEDHPDVAAVAAD
YAQQCGFDIVAADSAETAIQLLNRRHDIGLVFSDIVMPGMSGLELGRLIR
EHHPEIAVVLASGYSDRSATALDEGFPLLQKPYTLEALRHTLFQALGATR
TA
>RPC_4055 transcriptional regulator, Crp/Fnr family
MLNQSVRTSDGNAKSGNTAFASGDQFSTVTGHAGLVASEFSYRKEEEIYG
EDETSEYVYQVVSGAVRNYKLLSDGRRQIGAFYLPGDVFGLESGPVHRLT
AEAIVDTTVRLLKRRSLEQAAATDVNVARSLWAMTAGELRHAEDHMLLLG
RKNAMERVANFLLEMDRRLAVAGLMALPMCRRDIGDYLGLTLETVSRALS
QLHSQGVLGFSGARQIVLRNRQHLHNMDA
>RPC_2578 nitrogen metabolism transcriptional regulator, NtrC, Fis Family
MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDL
VITDVVMPDENAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYE
YLPKPFDLKELIAIVGRALAEPKDRAASHADDSEFDSIPLVGRSPAMQEI
YRVLARLMQTDLTVMISGESGTGKELVARALHDYGKRRNGPFVAVNMAAI
PRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDEIGDMPMEAQT
RLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR
LNVVPLRLPPLREHIEDLPDLVRHFFALAEKDGLPAKKLDAQALERLKQH
RWPGNVRELENLARRLAALYPQDVITGSVIDGELAPPAVVSGGSISNTVD
NLGGAVETYLSSHFSSFPNGVPPPGLYHRILREIEVPLLTAALAATRGNQ
IRAADLLGLNRNTLRKKIRDLDIQVYRSGG
>RPC_4604 CheC, inhibitor of MCP methylation
MSIERGELTDIEQDALAEIANLGVSRAAASLRQMVGEQVLLSVPAVRIVA
RDIAAQLVEGDNAQQLVAVKQSFDGPFAGKALLIFPQAQSLELVRSIVGH
EHSLEDVIDLEQEALAETGNVILNACLATIANLLRRTMRMSLPSVIRGDG
KTLFEVDGSADDGNLVLFLYIDFTIKNRDIRGFIALLMDLPSITALKHIV
GEFIEGVENQTA
>RPC_0586 transcriptional modulator of MazE/toxin, MazF
MGRLEVRRGDVVLVVAQGDLGKPRPGVIVQADELGNTTTSILICPMSSDL
SEFRRTRPIVEPSADNGLHVRSQIMVDKVNALRRDRIRGVIGRIDADTAE
HLDRALLVVLGLAR
>RPC_0469 PhoH-like protein
MPKSASDSPSLAPRRKLDRESQTQPETQVVVAFDDNRAVSSLVGPYGQNL
ALVERRLAVVVDSRGNHITIAGSREGCDAARRVLDTLYELATQGHDLAQG
DVEGAIRAVIAQGSLFEFDAKPSSSAFEAINLRKRPVRARTAAQDSYIRA
LKRHELVFGIGPAGTGKTWLAVAHAAQLFERKEVDKIILTRPAVEAGERL
GFLPGDLKEKVDPYLRPIYDALYDLMDSRIVEKALQSNEIEIAPLAFMRG
RTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIVTGDPSQVDLPNGQT
SGLAEAAKLLDGVEGIAQVKFTAGDVIRHELVARIVAAYEGVPRPAASKN
GG
>RPC_1252 transcriptional regulator, AraC family
MIKSKTVAHTRLFTRPPVHTSPATIPFSFLEQTIESGGLGFAKFDPLSGK
LVSTNPRFCHMLGYATGELCDGSFTSKSLTHPDDIERCNGELQRLFRGEI
DSYTIDKRFLRKDGSILPARVTVTALERDGDNCAAEMIGVISAPADTKST
DYPAPRRDQPRSVAFWTKDFRTKSASCSEGLNILLGRSLNGPPPTFEDFV
AQLHPEDRPRVLEEARRVSNGMVYTSEHRIVRPSGEIRWVNQTVMPVFDD
LDEVVGLVGVSLDVTEAKRGQKYNSATSTVQAVKRYVDQNWDKPLNIAAL
AAAASVNTRTLFKHCKLAWGFTPNEYIKRVRLNHARALLQMPERSTTVLG
TALKCCFQNQGHFARDYRLAFGERPSETLERARQRRGR
>RPC_0789 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MRLIRCLALAALGFMMIAAGSPANALDAVSVRGDAPAIDLTAVLDHQRSE
GDRIQVSTAPGTDGIVRRIEVRAREGGQNWVVFALANNTDDQLDRLIVAP
HYRIVSSGLFWPDLGLSRIATVTPSTGDRPERQDSPTADVFRVTLDPGAV
ITFVAELRTDKLPQLYLWEPEAYKDKVNSFTLYQGIVIGISGLLALVLTI
LFVVKGSIMFPAAAALAWAVLVYIGVDFGFWGKVLDMSSGAERVWRASGE
AILAATLLVFLFAYLNLSRWHVRYSHITLGWLAFLGSLVALALFDPAVAS
GIARMSLVLIAFAGFALILYLSTHGFDRAVLLIPTWFLLVVWVIAAGMAV
AGSVTNDIVGPALLGGLVLIVMLIGFTVMQHAFAGGSAPTGVVSDIERRA
LALTGSGDLIWDWDVSADKVFTSPETETLLGLKRGTLEGSAAKWLEVLHP
LDQDRFRAALDSVLDQRRGRLTQDFRLRTPDGRFMWFALKARPVVGSDGE
VSRVVGTLTDVTEIKNAEERMLHDSVHDNLTGLPNRKLFIDRLNAVANFA
KAMPNLRPTLMVIDLDRFKQVNDSVGIAVGDSILLTLARRLTRILKPQDT
LARLAGDQFGLILMSEQDPAKITAFAETIRKTIRAPIAFNDREIFLTASI
GLALSDPQTQLTDEIIKDAELAMYHSKRIGGDRIDVYKPVMRARKTDRLT
LESELRRAIERQEITILYQPIVRLEDRSIAGFEALARWDHPKLGRMSPSE
FISIAEEIGLIVDLGMFVMDQTAKQLAIWQRAMRSREPIFASVNVSSRQL
LRHDLLHDIRTVLSRSTVARGTLKLELTESLVMENPEHAAQMLHRIRELG
TGLSLDDFGTGHSSLAYLQRFPFDTIKIDQSFVRTTSRGTRPVILKSIIA
LAHDLGMDVVAEGAETDSDAVELYQLGCEYAQGFAFGEPMDADAAMKLLT
EERLAEAS