Gene list
Applied filters:
COG category: Signal transduction mechanisms
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236
Number of genes found: 260
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# Rhodoferax ferrireducens DSM 15236, DSM 15236 >Rfer_1873 two component transcriptional regulator, LuxR family ATGCAACAAAAAATGCTGCCAAACACCATGATTCGAATTGCCATTGTTGA CGACCATGCGATGGTCCGCGCCGGATTGCGCCAATTTTTTTCCGACCAGA TCGACTTCGCCGTGGTCGCCGAAGCAGCCAATGGCCGAGGGGCGCTTGAC ATCGTGCGCAAAGGCGAGGTCGACGTGATCCTGCTCGACATCTCCATGCC GGACCAAAGCGGTGTTGATGCACTGATCGCCATCCGGGCCCGTGCACCCG ATTTGCCGGTACTGATTTTGAGTGGCTTTGCGGAAGAACATTACGCCACC ACCTTGCTGCGCCAAGGTGCCAGTGGCTACCTGAACAAAGACTGCGACCC GGAAGAAATTGTCAAAGCGATCCGCACGGTGCATCGCGGGCGCAAGTACA TCACGGCAGGTGTTGCCGAGCTTCTGGCGGACGGTTTGAGCGGGGGAACC GATAAGCCGCTTCATGAGAATCTGTCGGAGCGTGAGTTACAGGTTTTTTT GCGTCTGGCCAAGGGAGAGGCCATCGGCCACATGGCGGTCAGTATGTCGC TGAGCGTCAAGACGGTCAGCACCTACCGAACCCGGGTGATGGAAAAAATG AAACTCGAAACAAACAGCGACCTGACCTATTACGCGTTGAAAAGCGGCTT GATCCAATAG >Rfer_2735 response regulator receiver domain protein ATGGGTGCACTGCGTAAAGTTCTGGTCGTGGATGACGATGCTGTGGTCGG CAAGAGTTTCAAACGGGTTCTGTCCGACAAAGGCTATATCGTTACCACCG CTGAAAATGCTCATGAAGCGCTAAAGCAAATTCGTGAGCAAGAGTTCGAT GTCGTTTTCACCGACATCAAGATGCCCGGCATGGACGGCGTCGAGTTGGC CGAACACGTCAAGGCCAGTCGGCCCTGGACACCCGTGGTCATCATCACCG GCTACGGCACCGCTGAAAACGAAGTGAGAGCCAAGGCAGCGGGCGTGTCG GACTTCATGCGCAAGCCGCTGTCACCGGAGATGATTGAAGAAAGCGCCGC ACATGCGCTGCTCCAACCCGCGCTGACCATCGTTCCAACGCTGCAAGCGA GCCCGGTCGAACAGTCGCAGGTCGAAGTGCTGGAGGAAAAGAGCAACTTC AGGAACATCGCCCTGTTTCTGGCGGCGCCGTTCATCGGCTTGGCCTATGC AGTATTTCTGCCTTTGGTCGGTCTGGCGATGCTGGCCTGGATAGGGGGCA AGGCGCTGCTTCAAACACAAGCCGCAAAAAAGACGCCGGCCTATCTGAGA AACGTGGCTCTGTTCGCCTTTGCCCCGTTTATTGGTCTGGCCTACGCGAT CATGCTGCCCTTCGTCGGAACGGCCATGCTGGTCTGGGTTGGCGCGAAGG CTTTGATGGAAACAAAGCAAACAGCGTAA >Rfer_3012 diguanylate cyclase with PAS/PAC sensor ATGGGATTTCGTAGAAACCCGCTGAGCATGGACGAATTGCGCGAACTCGC CCGCAAGCGATTCCTGGGGCGCACCGCCAGCTCGGCCAAGGCCTTGAGCG TCGCGGAAGCACAACGTCTATTTGAAGAACTCGAAATCCATCAAATTGAG CTGGAGCTGCAAAACGAGCACCTGAACACGACCCGCATGCAACTGGAGTC GGCGCTCACGCAAAGCAATGAGTTCAACGATTTTGCGCCGGTCGGCATTT TTTCGCTCGACGCCGCCGGGACCATCACCAAGTTGAATCTCGCCGGGGCC AGTCTGTTGGGCCGCGAGCGCGCCCGCCTGTTGGGGAGCCGGCTCGGGCT CTTCGTGGCCGACGTCGACCGCCCGCAGTTCAATGCCTTGCTGGCGCAGG CCACCAACTCCGGTGACGTGCAAAGCAGTGAGTTGACGTTTTCCAACAAA GGGCCGCTGGTCTCGCATGTGCAGATCAAGGTGGCAGGGTTGGGGCCGGC CCAGGGCTGGCAGATCATTCTGGTGGATATCACCGAACGCAGGCTGGCAG AAGAACAGTTGCGCGCCAGCGAGGAACGCTGGAAGCTGGCGCTGGAGGCT GCCGGCGATGGTGTGTGGGACTGGAACGTGGTGACGGGTGAGCAGATTTT TTCCAGGCGTTTCGAGCAACTCTACGGTTTTGCCGAGAAAGAATACGGGC ACCACCTTGATGACTGGGTTTCCCGCATCCATCCCGACGATAAGGATCGT GTGATCAGCGAGCATCAAGCGTGCCTGAGCGGCAAGACTGCCAGCACATT CATTGAATTCCGGGGCCAATGCAAGGATGGCAGCTGGAAGTGGGTGCTTT CCCGCGGCGCCGTCGTCAGCCGCAACGCCCACGGTAACGCCCAGCGCATG ATCGGCACGCATGTCGACATCAGCAAGCAAAAAATGACTGAAGAGGCCTT GCGGGTTGCCAGCCATTTCCAGCAGGCGGTGTTTGATTCCCTGGCGGCCC ATATCGCGGTGCTCGACCAGGCGGGTACGGTGATGCAAACCAATGCGGCG TGGCGGCAATATACCGTTGACAGCGGGTTTGCAGCGCGCCCCTGTTGCCA GGAGGGCAGCTATCTGAAAATTCTCGGTTGCCTGACCGAACAGGACCCTC AAACGGTGCAGGCCGCGCAGGCCGGCATCACCGCGGTCCTGGCCGGCGAG CTGCCCTATTTTCAGCTGGTCCAGCCGTTTTTTACCCCGCTGGACAAGCG CTGGTTCAGCCTGAAAGTCACACCGGTGCACGATGGCGAGGAGCGACTGG TGGTCAGCCATGAAGACGTGACCCAAATCAAGACCGCCGAATTGAACAGC CTGACGCTGGCCAATCGGGACACCCTGACCGGCGCGCTGAGTCGACGCAA CTTCTTCAACCTGGCCGAGCAGGAGGTGGTCCGCTCGATTCGCTATGCCT TGCCCCTGATGGTGCTGATGCTGGACCTGGATCATTTCAAGGTCATCAAC GACCGGTATGGCCATGCCGCAGGCGATGTGATTCTGCAAAAGTTTGTGCA AAACGTGACCGGTGTGTTGCGCGAGTCCGACCTGATTGGGCGCATCGGTG GCGAGGAGTTTGCGGTGTTGTTGCCCAATACCCCGCTCGAAGGCGGGCGC GCACTGGCGCAGCGCATTGTTGAACGCGTTCGTGCCGACCCGGTGCAAGT CAATGGCCACCTCATCGCGTACACGGTCAGCATTGGCGCGGGCTGTCTGT CGAGCGAGACTTCGTTTGCCGCTCTGTTGAGCCTGGCTGACGCGGCGCTG TACCGAGCCAAGGACGGGGGGCGCGACCGCCTTGAAGTGGGGCCGGCTGG AGCCCCTTAG >Rfer_2981 signal transduction histidine kinase, nitrogen specific, NtrB TTGGACAAGCCCGATCACACCCCGACTGCCCCTGACGTCGCGTCCAGCGC CGCGGCGACGCTGCGCTTCCAGTCGTTTGACCTGCTGGCCACGCTGGTGG CAGTGGTGCACAGCAATGGCACCGTCCTCTTTGCCAATGCCGCGCTGGAG GATGCGCGCGGCATGTCACGGCGCGCGATTGTGGGCTCATGCCTGTCCGA CAGCTTTACGGAACCCGCCCGCCTCCAACAGGCCCTGCAAAGCGCGGATG ACAATGAATTTGCCGCCTTGCGCTATGACACCTGGCTCAAACGCTTGAAC CACGAGCCACTGCCGGTGCACGTGATCGTGACCCGGACTGAAACAGAAGA TGAAATTGTGGTCGAGTTGCTGCCACTGGAGCAACAAGCGCGTCAGGACC GGGAGGAACGCCTGGCTGAGCAGGCGCAGGCCAACAAAGAGTTGATTCGC AATCTGGCGCACGAGATCAAGAACCCGCTGGGCGGTATTCGCGGCGCGGC GCAGTTGCTGGAGCTCGAAATGGACTCGGCAGAACTCACCGAATACACGC AGGTCATCATCCATGAGGCGGATCGTCTGCAAACACTGGTGGACCGGCTG CTGGCACCGCACCGGCGCCCGCATCTGGTGGGGGATGTCAACATCCACGA GGTCTGTGAACATGTGCGGCTGCTCCTGTCGGCCGAATTCCCCAAGGGCC TGCAGGTGGTGCGCGACTTTGACACCTCGATTCCCGAGTTTCGCGGTGAC CGCGAGCAGCTTATTCAGACCGTACTCAACATTGCGCACAACGCCTGCCA GGCGCTGGCAGCGCAGATAGCGCAAGGCAGCGCCTGCCTGACTTTTCGCA CGCGAATTGCGCGCCAGATCACTTTTGGTAAACAACGCTACCGGTTGGCA CTGGAATTGCATGTGATTGACAACGGGCCTGGTGTACCAGACTCGATCAA AGACCGCATTTTCTATCCGCTGGTGTCAGGGCGTGAAGGCGGTTCGGGGC TGGGACTGACATTGGCGCAAACCTTTGTCCAGCAACACCACGGCTTGATC GAGTGCGACAGTGTGCCGGGCTGCACGGATTTCAAGATATTGATTCCACT CCCTTAA >Rfer_2030 diguanylate cyclase/phosphodiesterase ATGGTGACGCGCTCCTATGCCGTGCGGCGTGGTTGCGGGCCGCTGGCTGA CCTGATGCGCGGCACCGGGCTGTACCCGGTCTATCAGCCCATTGTGTCGC TGGAGGGTGGTGCCATTTATTCCCATGAGGCCCTGATTCGCGGGCCACAA GGCACCTCATTGCATACGCCCGATATGTTGTTGGCAGCAGCGGCACATGA GAGGCTGAACTTCGAGTTTGAAACCCTGTGTGTCATTGCCGCACTGGATC AGTGGGGCACGCTGCTTCAAAATGGGCGACTGTTTGTCAATATCAGCGCG CAGGTGCTGGTTCAGGTCTTGAAACAATGCGGGCGTGATGCCCTGATCGA GATGGTCAGCGGCTTGGGTGTTTTGCCACGCCGCTTGGTGCTGGAGATCA CCGAGTATGAGCGGGTGACCGACATGGATTATTTCGCCAGCGTCGTGGGC GAGCTGCGTGCGATCGGCGTCTCCATCGCACTGGACGATTTTGGCGATGG TCGCTCGAGTCTGCGCCTGTGGTCGCAACTCAAGCCCGAGATCGTGAAGA TCGACAAATACTTTACCAAGGACCTCAGCCTGCACGCCGACAAAGTCAAG ACGATTCAGGCTTTGCAACAAATTGCCGCCATCTTTGATACCGCCCTGGT CGCCGAAGGCATTGAGACCGAGGACGACTTGCGCGTTCTGCGCGATCTCG GCATTTCTTATGGCCAAGGTTATCTTCTGGGGCGCCCGGCCGCACTGCCG CGGGAGCAGATTGAAGAGCCGGCAATGGCCGTGATGCAGGACCGTCGGGT CGCCGTGTTCCCCGAGTTGCGGCGGGCGTCCAACGCGGGCTCCTTAAAAC GCCTGTTGGTGCTGGAGGCGCCTGCTGTCGGCTTGGATGCGACCAACGAT GAATTGGCGTCGCTGTTTATGACGCACACCAAGCTGCATGCCGCGGCAGT TGTTGACGGCACCCGCCCGGTGGGGATCATCAACCGTTCACGCTTTATGA ACGAATACAGCAGGCTGTATTACCGTGAGGTATGGGGCCGCAAGCCGTGC CTGGTTCATGCCAATCTGGAGCCCCGCTTGATCGAGCGCGACCACAATGT TGACGAGTTGATCGGCATTCTCACGTCGGACGACCAACGTTACCTCGCCG ATGGATTTGTCGTGACGGACAACGGCCGCTATGCTGGCTTGGGCACCGGC GATCAGCTGGTTCGCTCAGTCACGGAGACACGCATTGAAGCGGCCCGCCA TGCCAACCCACTGACTTTTTTGCCGGGCAATATTCCGATCAGTCAACATA TCGAGCGGCTCTTGAACAGTGGCGTTGATTTTGTTGCCTGCTACGCCGAT CTGAATAATTTCAAACCCTTTAACGACCAATATGGTTATTGGCGCGGCGA CGAAATGATTCGTCTGGTGGCCCGGCTCGCCCAGGCGCATTGTGATCCAC GGCGTGATTTTGTCGGGCATGTTGGTGGCGACGACTTCATCATCCTGTAT CAGAGTGATGACTGGCGGGTGCAATGCGAGCAATTCATCGCTGAATTTGC CAAGCGCGCGGTGGAGCTGTTTGATCCGTCGGCGCGTGCGGCTGGCGGTA TTGAAGCTGAAGATCGCTTTGGAGTACCCCGATTTTTCCCTTTGACCACC ATCTCGATCGGTGCCGTCAAAGTCGCGCGCGATGAGTATGCCAATGCCGA GCAGGTCGCGTCGGAGGCGGCACGGGCCAAGCACGACGCCAAGACCCATA ACGTGGGACTGCTGGTGCGCGATACCCTCGACTTCAGCACTCGCTGA >Rfer_0894 two component transcriptional regulator, LuxR family ATGAAACCGGTTCGCGTGTTGCTGGCTGACGACCACACCCTGGTGCGCGC GGGCTTGCGCAAGTTACTCGAGTCGATGCCCGATGTCGAGGTGGTGGGCG AAGCCGCCGATGGCCTGGCGCTGCTGGCACTGGCGGCAGAACTGCAACCG CAACTGGTGATGATGGACATCGCCATGCCGGGCCTTAATGGGCTGGAGGC CACGGCCCGACTGGCCAAGGCCTGGCCCACCATCCGCGTCCTCATCCTGT CGATGCATCAAAACGAAGAATACGTGCGCCAGGCCCTGCGCAATGGCGCG GCCGCTTACCTGCTGAAGGACTGCGCGCCGCTGGAGCTCGAACTGGCCCT GAAGGCCGTGTTGCGTGGCGAGACTTACCTCAGCCCAGCGGTGTCCAAAG GCGTGGTGAGCGACTACGTGCAGCGCTTGCGCGGGGAGGCGCAGCCGGGC GCGCAGCTGACGCCGCGCCAGCGCGAGGTCTTGCAGCTCATCGCTGAAGG CCAAAGCACCAAGGAAATCGCACGCCGCCTCGATCTTGCCGTCAAGACCG TGGAGTCGCACCGCAGCCAACTCATGAAACAGCTCGACATTCATGAAGTC GCGGGCCTTGTGCGCTACGCCATGCACGTCGGCGTGGTGACGTCAGGGCT GTGA >Rfer_3588 multi-sensor signal transduction histidine kinase GTGAGCCATGTTGGCCCCAGCATTGAACCTGCTGGTCGATTCTCCCTGAG GAATTCGCGCACGCTGCGCTGGACTGTGGGCGTTGGTCTGGTCGTCATGG TGGTTGTTGGGTTGGTGCTGCTGTTTCTGCTGACGCAAGCGACGACCAAT CGTGACATGTACGAGCGCAATTACGCGCGACTTTTCGTTCTGAACGTGGT GGTGGCCAGTCTGTTGCTGATGGTCATCGTCTGGATCGCCTACCGATTGG TCAAGCGCTTGCGGCAGGGTAAATTTGGCAGCCGCTTGCTGGTCAAACTG GCCGCGATTTTTGCGCTGGCGGGGTTTGCCCCGGGCGTTCTGATTTATGT GGTTTCCTATCAGTTTGTGTCGCGCTCGATTGAAAGCTGGTTCGACGTCA AGGTGGAAGGGGCGCTGGACGCAGGTCTCAATCTCGGCCGTGCCACGCTG GAGGCACTGTCCAGTGACCTGGCCAGCAAAGCCCGTGGTGCCGCCTCACA ACTGGCCAATACGCCCGATGTCAGTGCCGCCTTGCCGCTGGAGCGTGTGC GCGAACAGTTGGGTGAGAGTGATGTGTTGCTGTGGAGCGCTGCCGGACAG CTGATTGCCGCCGCCGGCCAGTCCCGTTATCAACTCAATCCGGAGCGACC CAGCCAGCAGCAGTTTCGCAGCGCGCGTGCTCAAAAGTTCATCACCTGGA TTGAGGGGCTCGATGATTGGGTGCCGGGCGTGGTGGTGAATGCCCGGATC AAGGCCTTGGTTCTGGTGTCGAGCAACAGCCTGGGTTTGCTGGAACAGCC GCGTTTTCTCCTGGTGTCCCAAACATTGCCTTCCACTTTGGTAGCCAATG CGCTGGCGGTCACGCAAGCCAACCAAGAGTATCAGGAACGGGCGCTGGCG CGTGAGGGGCTGCGTCGCATGTACATCGGCACCTTGACGCTGAGTCTGTT TCTGGCCGTATTTGGCGCGGTCCTGCTAGCCGTTGTGCTGGGCAATCAGA TTGCACGCCCGCTGCTCTTGCTGGCCGACGGCGTGAGCCAGGTGGCTGCG GGAGATTTGACGCCCAAGGCGTCGCTGCAGGGGCGCGACGAACTCGATGG TTTGACCCGTTCCTTTGCCGACATGACACAACAGCTTTCAGACGCTCGGC AGGCGGTGCAGGCCAGCATGCAGCAGGTGAACTCCGCGCGCGCCAATTTG CAAACCATTCTCGACAACCTCACGGCTGGCGTGATCGTGCTCGATGCACA AGGCGTTATTGTGTCCTCCAATCCGGGTGCCACACGTATTCTCCGGGTGC CGCTGGCGGCCTACGAGGGTCAGCGCTTGAGCGACATTGAGGGTCTGCAA ACCTTTGCCGCCAGCGTTCAGGCGCAGTTTGATTCGTTTCTGGCATCCAA CGACCAACACAGGTTCGACCATTGGCAGCAGTCCTTCGAACTTGGCAATG GTGTGACCAACCTGGCCGGACGGCAGCCCAGCAACGCTCTTGTTTTGGTA GCGCGTGGCGCCTCGCTGCCGGGGGCCACACGGCTCCTGGTCTTTGATGA CATCTCTGAAATCGTGTCCGCCCAACGGGCCCAGGCGTGGGGTGAAGTGG CCCGCCGATTGGCGCATGAGATCAAAAACCCACTGACCCCGATCCAGTTG TCAGCCGAACGGCTGGAGATGAAGCTGACCGGCAAGATCGCGCCACCTGA GCAGGCGCTGCTGACCAAGTCAGTCAAAACCATCGTTACGCAGGTGGACG CCATGAAGCGTCTGGTCAACGAATTCCGCGACTATGCACGGCTCCCAGCG GCAGAACTCAGGCCGGTCGATTTGAATGCGCTGGTGACCGACGTGTTGCA GCTGTATGCCAGCGAGACTTCGCCGGTGCCCGTACAGATGGAGCTTGATC CATCCGTTCCAACCATCATGGGCGATGCACAGCAGCTGCGTCAAGTGATG CACAACCTGCTGCAGAACGCACAGGATGCCTCGGAATCGGCTGGCAACAC CGACGCCGAGCATCCGGTGATTATCAGAACCCAGTGGCTTGAGAACGCCG GCCTGGCTCGCCTGAGCGTGCTTGACTGCGGCACAGGATTTCCAGACAGT ATTCTTAAACGCGCGTTTGAGCCCTACGTCACGACCAAGCCCAAGGGCAC TGGTCTGGGCCTGGCGGTCGTCAAAAAAATTGCGGATGAACATGGTGCCC GCGTGGATATCGCCAACCGGGTCGCGGACGGCCAAACGCTGGGTGCGCAA GTGTCGTTATCATTCGCCACAGAGAATGTCGCGCCGGGCGAGCCGGGCGA CTCTTGCATACCCAAGGAACGCGCGTAA >Rfer_0564 putative signal transduction histidine kinase ATGAGACCCCACTGCTGCACTGATGCTGGTCACCTTCATTTACGGGCATC GCCGACAATGATACCGTTCACCATGGCGCAAACACATCCTCATCCCCGTC CGCTACGAATTTTGCACTTGGAAGATTCCGCCCTTGACCATGAACTCGTC AAACGGGCGTTACTCAAGTCGCACCAGCCCTGCGAGCTTGAGCGGGTAGA AACCCTTAACGAGTTTGGACGGCGGGTCAAAGAGTTCGAATTTGATGTCA TTCTGGCGGACTATCGACTGCCCGGCTTTACGGCACTGGACGCCTGGCAT ATCCTGCAACAACAGACACGACAACCGCCCTTCGTCTTGCTGTCCGGTGC CATTGGCGAGCCGGCCGCCGTTGCGGCCATCAAAACGGGCATCAGCGACT ACCTGGCCAAAGACGACCTGGGCCGACTGGCGCAGGTCATCCGCCGCGCG CTTGAGGTCCACGACATTCGACGGGCCAAAGAAATGGCCGACAGCGAGTT GGCCAGGTCCGAGAAAAGGCTGGCGGATTTCGCCGAGCATTTACAGATGA CCATAGAACAAGAGCGTGCTGCAATTGCCCGCGAAATTCATGATGACATT GGCGGCGCGCTGGCCGCCGTCCGCTTTGATCTTTCCTGGATCGGCCGACA CACAGCCGACCCCGTGACCCAGCAGCACATCACAGCGGCCACCGAGATGC TGCAGCAGGCGATTGGGGCAAGTCAGCGCATCATGATGAATTTGCGTCCC GCCATTCTGGATCAAGGTCTGGTCGCTGCCGTTCAATGGCTTGCCGGAGG TTTTGCAAAGCGCACGGGCATAAAAACTACCGTGCATGCGGCACCAGAAG CGGGCACGCTGTCCAAGGCCGTGCAGTTGGTGGCCTACCGCACGGCACAG GAAGCCCTGACCAATATTGCCAAACACGCGGACTGCAGCCAGGTCACCAT CGACTTGTCCGATGCAGAGAACGTCTTGACGCTTGAAATCAAGGATAACG GCAAAGGCATCTCGCCCATCGAGCTTAGCAAGCCGCAAGCGTTTGGCGTC CGGGGTCTCCACGAACGAGCCAAGACCGTGGGCGGCTGGCTAGACGTCAG CACCCACCTGGGCAGCGGAACTTCAATCATTCTGTCCGTGCCCTTGGCGT AA >Rfer_3438 transcriptional regulators, TraR/DksA family ATGTTTTCCTCGTTTTTTCAATTGATGGGATTTCCAGCGCTTAAACCTGT AAACTCGCCCGCCAAACAAGTGGCGCAAAGCCAGCCCTCAAAAGCTGGCG CCGAGGGGATAAGCTTAAAAGCTTCAGGCGGCGCTGCCAACACCAGGCAA ACATCCACCCGCGATGTCATCGAGCAGAAAAAATCAGCGAGGAGACAAGA CGTGAAATCGCAAACCGTGAAAGCCAAGGAGACGCGTAAAGCGACCCATG CCATCGTCAAGGTCAAGCCGGGCGTCAAAGCGCTCGCCAAGCCGAAACCG GTGGCGCGGCCTCAAGACAAGCCGGCGGTGAAGCCCGCGCCCGTTGCTAA ATCAGCGCAAGGCGCCGCGGCCAAACCGCCGGTTGGCAAGAAGGCGCCGG CCAAGCCGTCAGTGCCAACGAAAGTGGTGGGGAAAGAGTCCAAGTCGGCT CCGGAAACCGTGGTTAAGGTGACCAAGGTGGCCAAGGCATCGCCAGCGAA GGTGGCCAAGGCCCCCTCGGTCAAAGTTGTCAAACCGACAGCAACAATTC AAGCAAAGGATTCAGTGAAAACGACGCTCGCGAAAGCCGCTAAACCTGAG GTGGCAGCACCCAAACTCCCCGTGGCCCCGGCTGTGACGCCGGTCAAAGT TGCGCTGGCGCCCGTAGCGTCAGCCGCCCCATCCGTACCCGTCAGGGCGG GTCGTCCATCTTCGCGGCTGGCGCAGTTGACTGTGCCTTCCATGGCGCAG TCGGTGGCTTCAACCGCTGCCAAAGCCAGTTTTTCACAAACCATCGTCGC GCCCTACATCGTTCCACCGGTCGCTTCCGCCGTCAAAAAAGACCCGGCGT TGGCCAACAACTGGAAACTCAAACCGGTTGAACAATTGACCGAGGCCGAA CTGATCGCCATGCCTGATGACGAGTACATGAACGATACCCAGCTGGCGTT CTTTCGTCGTGTGCTCACCGCGCTCAAACAGGATATTCTGAGCAACGCCG GCCAAACCACTGAGCATCTGCGGGCCGACACGGTGGTGGTGCCTGATCCG GCCGATCGGGCCACCATTGAAGAAGAACACGCCTTGGAGTTGCGCACCCG GGACCGTGAGCGCAAGCTGCTAAAGAAAATTGAACAATCGCTCGCGCGCA TCGACTCGGGCGACTATGGCTATTGTGATGAAACCGGTGAAGCCATCGGG GTTGGGCGTCTGTTGGCGCGCCCGACCGCCAATCTGTCGCTGGAGGCTCA GCAGCGCCGGGAACTCAAGCAGAAGATGTTTGGGGATTGA >Rfer_2217 putative serine protein kinase, PrkA ATGAATGTCTTCGCACGTTACCAAGGTCGGTTTGAGGCCGCCAAGGAAGA AGAAATGTCGATCCAGGACTACCTGGATCTCTGCAAACGCGACACCACCG CCTACGCCACCGTTGCCGAGCGCATGCTGCGGGCCATTGGCGAGCCCGAG TTGGTCGATACCCGCACCGACCCCAGGCTGTCGCGTATCTTTGCCAACAA AATGCTCAGGCGTTATCCGGCGTTTCGCGACCTTTACGGCATGGAGGAAG TGATTGAGCAGATCGTCTCCTATTTCCGCCATGCCGCGCAAGGGCTGGAG GAGAAGAAACAGATTCTGTACCTGCTGGGCCCGGTCGGCGGCGGCAAATC GTCGCTGGCAGAGAAGCTCAAAGCCCTGATTGAAGTTGTGCCCATCTACA CCATCAAGGGCTCACCGGTGCATGAGTCGCCCCTGGGCCTGTTCAATCCG CTGGAGGACGCGCAAATACTGGAGGACGACTACGGCATTTCGCGGCGTTA CCTGGGCACCATCATGAGCCCGTGGGCGGTGAAGCGTCTGCATGAGTTCG GCGGCGACATCACCCGCTTTCGCGTGGTCAAGCTGCATCCATCGGTGCTG TCGCAAATCGCTGTTTCCAAGACCGAGCCGGGCGATGAGAACAACCAGGA CATTTCTTCCCTGGTGGGCAAGATTGACATCCGCAAGCTTGAGACCTACT CCCAAAGCGACCCCGACGCGTATTCCTTCTCGGGCGGCCTGTGCCTGGCC AATCGCGGCGTGCTGGAATTTGTCGAGATGTTCAAGGCGCCCATCAAGGT ACTGCACCCCTTGCTGACCGCCACGCAGGAGGGCAACTACAAGGGCACTG AAGGCTTCGGCGCCATTCCGTTTGACGGCTTGGTGCTGGCGCACTCCAAC GAGGCCGAATGGCTGACGTTCAAGAACAATCGCAACAACGAGGCTTTTCT TGACCGCATTTACATCGTGAAGGTGCCCTACTCCCTGCGCGTGTCGGACG AGATTCACATCTACGAAAAACTGTTGGCCAATTCCTCACTGGTCAAGGCC CCGTGCGCGCCGGATACGCTCAAGATGCTGGCGCAGTTTGCCGTGTTGTC GCGGCTCAAGGAGCCGGAAAACTCCAGCATCTTCTCCAAGATGCGGGTCT ATGACGGCGAAAACCTCAAGGACACCGACCCCAAGGCCAAGAGCTACCAG GAGTACCGCGATTTTGCCGGCGTGGATGAAGGCATGACGGGGCTATCAAC CCGGTTCGCGTTCAAGATTCTCTCGCGCGTGTTCAATTTCGACCACCGCG AGGTTGCCGCTAACCCGGTGCATCTGATGTATGTGCTGGAGCAGCAGATT GAACAGGAGCAGTTCCCGGCTGAGGTCGCCGAACGCTACACCCGTTTCCT CAAGGAATTCCTCTCGCCGCGTTACGCCGAGTTCATTGGCAAGGAGATCC AGACCGCCTATCTGGAGAGCTACTCCGAGTACGGCCAGAATATCTTTGAC CGCTATGTGACTTACGCCGACTTCTGGATTCAGGACCAGGAGTACCGCGA CACCAACACCGGCGAGATTCTGGACCGTGGCGCTCTCAACAGCGAACTGG AGAAAATCGAGAAACCGGCCGGCATCTCGAACCCGAAGGATTTTCGCAAC GAAGTGGTCAACTTTGTGCTGCGCGCCCGCGCCAAACACGAGGGGCAAAA CCCGCCGTGGACGTCTTACGAAAAGCTGCGTGCGGTCATCGAGAAAAAAA TGTTCTCCAATACGGAAGAACTGCTGCCAGTGATTTCGTTCAACGCCAAG GCCAGCGGCGACGAACAGAAGAAACACAAAGACTTCGTGAACCGGATGAT CAGCAAGGGCTACACAGAGAAGCAGGTGCGCCTGCTGTGTGAATGGTATC TGCGCGTACGCAAGTCCTCCTGA >Rfer_1825 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGAACAAGCCGATCAAAGTCCTGATCGTCGAGGACTCCGAAGACGACGC AATATTGGCACTGCGGGCGCTGCATCGCGGCGGGTTCGACCCGACGCACC AGCGTGTCCAGACGGCGGCGGGCCTGCAAGCCGCGCTGGCGCAGGAACGC TGGGACGCCGTCATCTCGGATTTCAGCATGCCGGGTTTCACCGGCCTGGA GGCGCTCGAAATTTTCCGCTCGGCCGGCCTCGATATTCCGTTCATCCTCA TTTCCGGCACCATCGGCGAGGCCACCGCCGTGGCCGCGATGAAGGCCGGC GCCAGCGACTACATGATGAAGTCGAGCCTCGCGCGGCTTGCGCCGGCGCT GGAACGTGAACTGAAAGAAGCGCAAATCCGTGCGGCCAATCAGCGAGCTC AAGCGGCGCTGATTGACAGCGAAGAGCGATTCCGGCAGATGGCGGAGAAC ATCCGCGACGTGTTCTTCCTCGCCGACGTGGAGGACGAACGGATTTTGTA TGTCAGCCCAGCCTACGAAGAAATTTGGGGCCGCAGCAGCGAAAGCCTGT ACGCGAATCCGCAATCGTGGACCGAGGCGGTCCACCCGGATGATCGGGCG TCGGCCTACGAAAAATACGGGCAGATCGTGTCGGCAGGCAAAACCGAGTT CGAGTTTCGGATGGTGCGCCCGGATGACTCGATTCGCTGGATCAAGGTCA GAGGCTTTCCGGTCCGGGACGACGCCGACAAGATCGTGCGCATCGCAGGC ATCGCCACCGACGTCACTGATCAAAAGACCGATGCCGAGAAGATCAAGAC TGCGCAGGACCGGATCACACACCTCAACCGCGTGTATGCCGTGCTGAGCG GCATCAATACGCTGATCGTGCGCGTGCGCAACCGCGACGAGCTGTTCAAG GAGGCGTGCCGGATTGCGGTCGAGGAAGGCGGTTTCCGTATGGCCATGAT CGCCACTGTCCATCACAGCACGACGCAGATCGTCCCGGTTGCAACTGCGG GCAAGGATGATGAGCTCATGACCGCCATCAACAATATCTTGTCGTCAAGT GAACATGCGCCCAAGACCATGAGCGCGCGGGCAATCCGGGACAAAAAGGC GGTCGTGTCCAATGCGGCACAAAACGACCCCCAGGTCTTGTTTAGCGCGA AATACATCAAAGCCGGCGTCCACTCGATGGCCGTGTTCCCGCTGATTGTC TCGGACGAAGCCGTGGGTGTGCTGGCGTTGTACGCCAGCGAGACTGAATT TTTCAAGGAAGAGGAGTTGAAGCTGCTATCGGAATTGGCAGGCGACGTCG CGTTCGCGATTGATCACATCGAGAAGCAGGAGCGGCTTAATTACCTCGTC TACTACGACGTGCTCACGGGACTGGCCAACCGCAGTCTTTTTCTCGAACG GGTGGCGCAGGCCATGCGCAGCGCTGTCAGAAGCGGGGACAAACTTGCCT TGTTTCTGATTGACCTGGAGCGTTTCAAAAACATCAACGACAGCCTGGGC CGACCGGCTGGCGACACGCTGTTAAGGCTGGTAGCAGAGTGGCTGACGAG CAAGGTGGGCGACGCCAACTTGTTGGCACGCGTCGGTGCTGACCTGTTTG CCGTGGTGCTGCCGGAGGTCAAGCAGGATGGCGAGGTGGCGCGGGCTCTT GATCAATTGATGGCCGCTTTTCTGGAGCATCCATTCCGGCTGAACGACGC CGTGTTCCGGATCTCCGCCAAGGTCGGGATAGCCCTGTTCCCCTACGACG GTGCTGACAGCGACACCTTGTTCAAGAACGCCGAGTCCGCGCTCAACAAG GCCAAGACGAGCGGCGAACGCTACCTGTTTTACACACAGAAGATGACGGA TATGGCGGCCGGCAAGCTGACGCTGGAAAACCAGTTGCGCCAGGCGCTCG ACAAAGGTGAGTTCGTGCTCCATTACCAGCCCAAGGTAAATCTTGCGAGC GGCAAGATGACCAGCGCCGAGGCGCTGATTCGCTGGAACGACCCGCGCAC GGGCCTGGTGCCACCCGGCCGGTTCATCCCGATCCTCGAAGAAACCGGAT TGATCCACGAAGTTGGACGCTGGGCGTTGCGCCAGGCCATCAAAGACGCC TTGCGCTGGCGCAGCGCGGGCCTGGCCGCCGTGCGCATCGCGGTGAACGT GTCGCCGCTGCAACTGCGCCATCGCGGCTTCATCGACGAGATCAGGCAGG CCATCAGCATTGACGCACATGCGGCCGCTGGGCTGGAACTGGAGATCACC GAAAGCCTGCTGATGGAGAACGTCCAGCACAGCATCACCAGCCTGCACGC GATCCGGGACATGGGCGTCACCCTGGCCATTGACGACTTTGGCACCGGTT TTTCCTCGCTCAGCTACTTGTCAAAACTCCCGGTGGACACGCTGAAGATC GACCGCTCGTTCGTGATCGAAATGACGGATGCGCCGGAAAGCCTGGCGCT GGTGTCCACCATCATCAGCCTGGCACATGCGCTCAAGCTCAAGGTGGTGG CCGAGGGGGTCGAAACCGAGGAGCAATCGCGCCTGCTGCAGGTGCTGAAC TGCGATGAAATCCAGGGTTTTCTATTCAGCAAACCGGTGCCGAGCGATAT CTTCGAGGCCAAGTACCTGGCCCTGCCCTCCTCCCCTTAA >Rfer_3704 response regulator receiver domain protein ATGGCAAATGAGCTTCGATTTTTGGTTGTTGACGACTTCTCCACCATGCG GCGGATCGTGCGCAACCTGCTCAAGGAAAGCGGCTACACCGAGGGCGATG AGGCCGAGGATGGCGTGGTGGCACTGCAAAAATTGCGCAACAGCAATTTT GACTTTGTCGTCAGCGACATCAACATGCCCAATATGAATGGTTTTCAACT GCTGTCTGAAATCAAGAAAGACGAGAAGCTCAAACATATTCCGGTGCTCA TGGTGACGGCGGAAGCGCGCAAGGAAGACATCGTGCTGGCCGCGCAGTCG GGCGCTGCGGGCTACATCGTCAAACCGTTTACCAAGGCCACTCTGGAAGA CAAAGTCAGCCTTATTCTCACCAAGCTGGGATTGAAGTAA >Rfer_0571 response regulator receiver modulated CheB methylesterase GTGGCTCGGTGGATTTGTTTTGAGGATATTGAATTGAAAAAAATTCGCGT GGTGGTGGTCGATGATTCTGCCTTGGTGCGCAGTCTGTTGGCGGAAATCA TCAATCGGCAAAAGGACATGGAATGTGTGGGAACTGCCAATGACCCCCTG ATCGCACGGGAAATGATCCGTGAACTCAATCCTGACGTCCTGACCCTTGA TATTGAGATGCCACGGATGGATGGCATCGATTTTTTGGGTCGGCTCATGC GTTTGCGGCCGATGCCGGTGGTGATGGTCTCGACCCTGACCGAGCGTGGT GCCGAAATTACGATGAAGGCGCTGGAACTTGGTGCCATTGATTTTGTGGC CAAGCCCAGAATTGGTGTCGCTAGCGGCCTGACCGAGTTGTCGGACCAAA TCGTGGAGAAGGTTCGCATCGCCGCGACGGCACATGTTAGACGCGCCCCG GCTGTGCCTGCTGCTGCCACCCCGGCCGTGGGGGGGGCAGTGGGTGGTCA CGCCCCGGTGGCGTCTATCGGCCGCGTGTCGACCGAGAAGCTGATATGTA TTGGCGCCTCGACCGGTGGTACCGAGGCCATCAAGGAAATACTGACGCGT CTTCCCGCCGACTCACCTGGCATCGTGATCACCCAGCACATGCCACCGGG CTTTACCACCAGCTTTGCCGCGCGACTGAACAGCTTGTGCCAGATTGCAG TGCAAGAGGCGGTCAACGGTGAGCGCATCCTGCCGGGACACGCCTATATC GCACCGGGCGGCAAACAATTCCGGGTCAGCCGCAGTGGTGCCAATTATGT GGCGCTGGTGGAAGATGGCGAGTTGGTTAATCGGCACAAACCGTCGGTTG AAGTGCTGTTTAAATCGGTCGCCAGCGTGGTGGGTCGCAATGCGTATGGT GTCATGTTGACCGGCATGGGCAACGATGGCGCCAAGGCGATGCGCGAAAT GAAGGATGCCGGCAGCTACAACTTTGTGCAGGATGAGGCGTCCTGCATCG TCTTTGGGATGCCGCGTGAAGCGATTTTGCATGGTGCCGCCGACGAAGTG TTGCCGCTGACGGCCATCGCGCCCGCGCTGATCGCCAAGCTGAGCAGCGC CACAGACCGTTACCGGGTGTGA >Rfer_3087 periplasmic sensor signal transduction histidine kinase ATGCTGCGGCGCTTTCCGTACCGGGTACAAATACCACTCGGTCTCTCTTT GGCAGTGCTGATGACTGCGCTGCTGGTGACTGCGGTCTCAGCCCGTATGT CCGCCAGCACCGCGCGGCGAGAAACACTGGCCATGCTAGATCGGGCCGTG GTGCTTTTGGTGGCCCAAGCGCGTCCTTTGTTGGTAGGCGACGACACTTG GCGCACGTTCACCCTGTTGCGCGACACGGTGGGTCTGATTCCTGGTGCGG CCACAGGCCATACTCGGCTGGCCGTGCTCGACACCGAGGGGCGGGTTTTT GCTGCTTCGGAGCCGGTTCAGCTTGAAATCGGACGCACATTGCTAGGATC CGACTGGCATGGGCAGCGATTAATGAGCGCATCTAACCTCAGAACCAGGC AGCAACTGGCGTTGAACAATGGTGCCGTCATATTGCTGGAGCCGATTCGC AGCGAAGATGGCCAAAGCTTGGGCTATGTCTTCATGGAAGTGGAGGCACC TGTGTTCGAGCCCGATTGGCTCGCCCTGGCTAAAACCGCCTTGATTGGCA TCACGCTTGCCGTGATGCTGTTGGCACCCGCCGGTTGGTGGGTCGGCCGA CGCATGACTCGCCCAGTGGAGCGACTGGTCAAGGTGATTGAGCGGGTTGG TCGTGAAGCACCCAATCGCCTGCGCAATGAAGTGCCTCAAACCACCGACC CTGAACTGCGCCGCATTGGCGGGGCCGTGCTGCAATTGATGAGCGAGCTC GAACAGCGTGAGAAGGCCGAGGCACGGGCCTTGTCAGCACAGCGCCTGGC CACCGTGGGCAGAATGACTGCTGCCGTCGCACATGAAATCAATAATCCGC TGGCTGGTCTGATCACTGCCACCCAGACCCTGCGTCTGCATGGTGACTCA GAACCCATCCGATTAAGTACAGTCGATTTACTGGAGCGAGGGCTGCAGCA AATTAGAACCACCGTAGCCGCCCTGTTGCCGCAGGCGCGCCGGGAAGACC GTGCGCTGGAGCCGGGCGACTTGGACGACATAGTGACCCTGGTTCGGACC ACGGCGGTCCGGCAACATATCACGCTCACGACACGCTTGGAAGTCGAATC AGCCCTGCGGGTACCCTCAGCGCCGCTGCGTCAGGTGATGCTCAACATGC TGCTCAATGCACTCGGTGCGGCCGGTGAGCATGGACGGATCGAGGCCGTA CTGAAAGCCGATGCCGAGTCAGTGCATTTTTCTGTATTGAACACCGGTAC TCCCCTCAGCTCTGAAAAATTCAACACCACACTGGACACTGAAAGCGGGC AAGACCCACGCGGCTTTGGTCTGTGGGTGTGCCAGGAATTGGCAAGCCAC TTTCGAGGCGGATTTAATCTCGACGAGACAACCGACAGCGGGACCCGACT GGTGTTTTGGCTACCCAATCGGGAGCCTTTGGAGAAAGAAACGTGA >Rfer_4051 HD-GYP domain-like ATGCTAGCAGGCTCGCCACATCCTGTAAGCTCATGCTGGCCAGCGTTTGG GGTCGGACGACCCCGCGCTCACCAGATTTTTGCGTGCATGGGCATAATCC ACCACTTCATGAACCTCGTTACTGTCAGCATCGACTCTGTTCTCATTGGT CGGCCGCTGCCGTTTTCGTTGTGGGACGAGAGCGGCGTCCTGTTGGCGCC CAAGGGTTTTGTGGTGAAGAGCCGGGCCGATCTGGACTCCATCAGCGACA AACGCGGCCAGCTGTTCATGGACGCGGCCGACTCCGAGTCCTATCAACGC GCCTATGTTGGCAAGCTTCACAGTCTGGTGCGCCAGGAAAAGCCCCTGGG GCAAATTGCAGAGAGCCAGTTTTCCACCTTTGAACTGGAAAACAGCCGCG CCACCCGCGATAGCACCGGCACCGATGAGCCCGATTGGCTGGACCTGCAG GGGCAAACCCAGACCATGCTGCTGGATGTCAATCCGGCGAGTTTTTGCGC CCGCCTGGACAAGTTGCAGGCCCAGCTGAGCCGGCATTTGCGCCAAAACC CGGACGGCACCCTGTTTGCCCTGATTCACCTCACGGGTAGTGAGATGCAG CTCTACAGCGCCACCCACGCCATGCTGGTGAGCGCCATGTGCAGTCTGGC CGCGCGTGAGGTGCTGAAATGGCCCGCCGCGCTGGAGACGCTGCTGGCCA AGGCGGCGCTGACCATGAACATCGGCATGACCGACCTGCAGAACCGTCTG GCCATGCAAACGACCGAGCCGAGCCCCGAGCAGCGCGCGGCCATCGACGA GCACGCGGCGCTTGCCGTGACCTTGCTCAAACAGCTGGGCATCACCGCCC CGCTCTGGCTGGAGGCAGTTCTTCACCACCACACCAAAACGCCGGGCCCG CTGGCGGGGCGCAGCGAGGGTCAGCGCATCGCGCGCCTGATCCAGCGCGC TGACATGTTTGCGGCCTGTCTGGCGCCGCGCGCGTCGCGCCCGGCCAAGT CGCCTGCCAACGCCATGCAGGCCAGTTATTTTGATGAAAACCGCCAGATT GACGAAGCCGGCGCGGCGCTGATCAAGGCCGTGGGCATTTACTCGCCGGG CACCTATGTGCGCCTGGCAACCGACGAGATCGCGGTGGTGATCAAGCGCG GCGCCAACACCACCACCCCGCGCGTGGCCGTGGTGATCAACCGCAGCGGC ATGCCCACGGGCGAGCTCATTGTGCGTGACACCAGCAAGCGCGAATTTCG CATCGTTATCGGGGTGGCGCAACGCGACGTCAAGGTAAAAATCAACCTGG AACGCCTGCTCGCCTTGACCAAGCTACCCAGCACCGACCGTCCCTGGTAG >Rfer_0060 transcriptional regulator, Crp/Fnr family GTGAACCCAGAACCTTTTGACATACAGCGTCTGTTGTCGGCGCTGCCGCT CTTCAGTGATCTGTCCCAGTTGGAGCGAGAACGTATCGCCCGAGGATGCC GCTTGGTGCGTCTGGCCCGTGGCGAGATGTTTTTTCGGGTCGGCGAAGCG TGTGAGGCGTTCCACGTCGTGGTGTCCGGGCAGATCAAGCTTTACGTGTC ATCACCTGCCGGCCAGGAGAAGGTGATCGAAATCATCGGCCCGGGCCGAA GCTTTGCGGAGGCCCTGGTGTTTCTCGGGCAGCCTCACATCGTGAATGCG CAGTCACTGACGGACACCTTGCTGGTCAGTGTTGCCAAGGCCGCCGTGCT GGCTGAAGTGGAGCGGGACCCGCGCTTCTCGCTGCACATGCTGGCTGGCA TTTCCCGTCGCCTTCACAGCTTGATTCATGACGTCGAGGGCTATGCCTTG CAAAGTGGCATGCAAAGACTGATTGGCTACTTGCTGCGCGATGTGGAGGC GGCAGTTGGCCATGGTAGTGGCAACGTCAGCGTCAGCGTTCATTTGCCCG CCAGCAAGGCAACAATTGCCTCCCGCCTGTCACTGACGCCCGAATATTTT TCTCGTGTACTGCACGAGCTCGAAACCCAAGGGCTGATTCAGATCGACAA GCGCGAGATCCGGATTCTGGACGTGCACCGACTCGCCAATTTCGAGTCAC ATTGA >Rfer_3546 putative PAS/PAC sensor protein ATGGTTAGTACTGCCGATATTCTCAATGCCCGTATCCTGATCGTGGACGA CCAGGAGGCCAACGTGCAGTTGCTGGAGCAAATGCTGCGAGGCGCGGGTT ATCAGCGCCTGACGTCGACCATGGATCCGTTTGCGGTCTGTGATTTGCAT CGCGCCAACCACTACGACCTGATTCTGCTCGATCTGCAGATGCCGGGCAT GGACGGTTTTCAGGTCATGGAAGGCCTGAAGGAAATTGACCCCGATGGTT ATGTGCCGATTCTTGTGGTCACGGCGCAGCCGGGTCACAAGCTGCGGGCG CTGGCCTCGGGCGCGAAGGATTTTGTGGCCAAACCGTTTGATCTGGTCGA AGTCAAGACACGGATTCACAACATGCTGGAAGTGCGCTTGTTGTACAAAA AACTCCAGAATTACAGCCAGGTGCTGGAGCAAACGGTGGCGGAGCGGACC GCTGAATTGACTGAAAGTGAAGCCCGCTTTCGCCGCCTGACGGAACTGGC ATCGGACTGGTACTGGGAGCAGGACGCGCAGGGGCAATTCACCAAGGTGT ATGGCCCGGTGCTGGACATGCTGGGCATATCGATGGAAAGCCTGCTGGGA GAAATCAAACAGGAGCAGGCGTTGCGCTGGAATGAGGCGGAGCGCGCGGT TCTCAAGGCGAATGTGGCGGCGCGCCGGCCGTTTCTCGATTTTGTCTTCA GCCGGATCGATGACGCGGGCGAGCGCCAGTACTTTCAGGTCAGCGGGGAG CCGATGTTTGATGCGTCGGGCCGCTTCACCGGCTATCGCGGTGTCGGCCG GGACGTCAGCGCGATCATGCGCGAGGTGGCGCAGCCGCGGGCGGCGTAA >Rfer_1827 periplasmic sensor signal transduction histidine kinase ATGAAAATCGGCACCAAAGAGCGGTTTGTCACGGGCACGGGGCTCGCGAT CATTGCCCTTATTGCGGCGATGATCTGGTGGACCTACTCGGAAGTCGAGG ACGCGAATCGCCAGCGCCGCGTGACGACTGAGATCGGACACGAACTCACC GAGCTGAGGCTGCTCACCTTCGAGTACAACCTGCACCACAATGAACGGGC TCGGGTGCAGTGGACCGCGGTGTCGGACCATGTTGACCAGCTGATCGCGG ACGCCCGGTTCCGCAGGCCCGCGCAAAGCAAAATCCTGGCCGATTTGCGG GGAAAAAGGGCGATAGGGCTGCGCCTCTTCACCGAAATCACCGCGGCAGA GCTCGCAGGCCGCGGGGACGTCCCATTGGACGAGGCGGGTCGGCGACATG AGGCGCAACTGCTGAGCCAACTGATGGTCTACCAGCAGGAGAACTTCGCC GACGCGCAGCGCCTGACCGACCTCGCGACGCAGCGCATCATGGACGCCGA ATGGCAGGTGATGATTGCAATCCTCGCCGGGCTGGCCTTGATCGCGTCAA TCATTGTCGCCACGTCATGGTTTCTGCGACGCGGCGTGCTGATGCCGATC GCCCAGCTCCAGCAGGCGACGCGCCACGTTGCCGCGGGCAATTGGAATTT TGTTCTTGACATACGCGCCAAGGACGAGATCGGTGAGTTGTCGAAAAATT TCGGCACCATGACCCAATCGCTGCAGGCATCGTTTGCGCAGGTCGAGCGC AGCAACCAGGATCTCGCGGCCTTGAACAGGGAACTCGAAGCATTCAGCTA TTCCGTGTCCCACGATTTGCGCGGACCGCTGCGCAGCATGGACGGCTTCT CACTGGTGCTGATCGAGGACTACGGCGACAAACTGGACGAAGAGGGCAAG GACGCCCTGCAGCGCATCCGTGCGGCGAGCCAGCGCATGGGCAACCTCAT CGACGACTTGCTCCGATTGTCCCAGGTGACACGGGCCGAGCTCAACGTGA CGCGGGTCGACCTCAGTGCAATCGCGCAGGACATCGCCGATACCCTGGAC CGGGAGCAGCCCGATCGGTCGACAAAATGGGAAATTCAACCTGGCTTGAG CCTCCACGCCGACCTGGCGCTGACGCGAATCGCCATGCAAAACCTGCTCC AGAACGCCTGGAAATTTACCGGCAGATCCGGGCAACCGGTGATTCGCGTT GGTGCACTGGAACGCGACTCGAAAACGATATTTTTCGTCGCCGACAACGG CGTCGGTTTCGACATGGCGCACGCGGCCAATCTCTTCGGCGCCTTCCAGC GGCTGCACCACGTTGAGGATTTCCCCGGCACCGGGATCGGTCTGGCGATC GTCCAGCGGATCATCCGTCGGCACGACGGAAAGCTCTGGGCCGAGGCGAA GGAAGGCGAAGGCGCGACGTTCTTTTTCACTCTGAAGGAATCGAAAAATG GATCAAATGAACAAGACCATCCTGCTGGTTGA >Rfer_1560 diguanylate cyclase ATGTCCTGGATTGAGGAACAACACCTGAGCAGTTCCAATCGACATCAGCG TTGGTGGCTGGGGCTCAGTATCGCGCTGTTGTCGGGCTTGGTCATTTTTG TCTCGACCATTGTTGCGGTGACCGGACAACCGATGGCGGCGCTGCTGACC GTTTGTTCGATGGTGCTGATCGGGATTTCTTTTGTGTTGTACCGCCGGTT GCACTTGGCACGGTTGCAGCGTGAGGAGGTGCTGGCCTTGTTGAGCAGAA AACAATGGCCGACGTGCGAGGGACTGTGTCACCTGGAGTCCAGCCTGGCC AAGTGTGCAGCGCGCCGGATACAGGTGCTGCAAGCCGAGATTGCCGACCT GCAAGACAGAGAGCAACGACTGAAAGTGCAAGCCCATCATGATGGTTTGA CTGGTCTGGCCAACCGGTTCCTCCTGACGGACCGTTTTCAGTTCACCGTG GAGCGGGCCAAGCGCAGTGGCCAATCCTTTGCTCTTTTAATGGTTGACTT GAATGACTTCAAGGCCATCAATGATCACCATGGTCATGTCGCCGGAGACG AGGTCTTGGTCGTCACAGCGCAGCGCTTGTCGAGTGCGGTACGCGCGTCC GATACAGTGGCCCGGATTGGCGGCGACGAGTTTGTGTTGATTATTGAATC AATCGAAGATCCGCAAGAGATGTTGCATATCGGAGAGAAACTGTTTGATA TGCTGACCGACCCAATCACCCTGAACACGGGCGTGGTTGCGAAACTGGGG GCAAGTATCGGCTTGGCTTTGTACCCGGATGATGGGGCTAGCCTGAATGA CTTGCTGAATGTCGCCGATCAAGCCATGTACGAGTGTAAATCGACCGGTT CCATGAGCCTCCAGTAA >Rfer_3574 periplasmic sensor signal transduction histidine kinase ATGGGCAAAATTATTCTCGAAAAGACCGGTCTGAGCCCGCTTGGCGTGGT CATCCGGCTGGTGCTGGTGGTCATCGCGGCTGAGGTGTTCATCCATCTGG GCATGAACGTTGTCTTGGAGTCGGTGCCGGGCAGCAAGGCAAGCGATTCC TTGTGGGCGGTGGTCGCCGTCATGGCTTTGATTCTGATCAAAGTCCCCGC TCTGTACCTGTTGGTGTTTCTTCCCTTGCAGGATCAACAAACCGCGCTGG CGCAGCACAACAACGACCAGCAGCGGGCCCTGGTCCTGTTGCGCCAGGAA GATGCACTGCGACTGGAGCGGGCACGCCAGGAGCTGGAAAATCGCGAGCA CATGATCCAGATCGAAAGGCTGTCGGCCCTGGGCACCATGGTGGGTGGTG TGGCCCATGAGATCAACAATCCCTTGATGGGTGTCATGAATTACGTTGAA CACGCCAGAGACAAAGCGACCGACGCCAGTTCGAAAGAGGTGCTGAACAA GGCGCTGCACGAAATTGACCGGATCAAGAAGATCGTATCCAACATGCTGA TCTTCGTTCGGCCTGACGCAGGCCAGCAAGAGCGCTGTGACCTGCCGCCA ACGGTTAACAAGACCGTTGACTTGCTCCAAAGTGAGCTGACCAAAAATGC CGTGCAGGTTCGGATCGATTTGCCGCCAGACCTGCCGCCCATCCAATGCA GCGCGGGCAGCCTGCAACAAGTGTTGGTGAATTTGCTGCTCAACGCCCGC GATGCGATGGCCGGACAGACCCAGCAGCGCATCACCATCAGCGCCCGGCT TGAAGGTGGCCAGGTCATTCTGTTCGTCTGTGACAACGGGCCCGGCATCC CGGAGGAAATTCGCGAAAAAATCTTTGACCCCTTCTTTACCACCAAGCCG GTTGGCAAAGGCACGGGTCTGGGTCTGTCGGTATCCAGGCATCTGATGCA GGAGGTGGGCGGGAGCATCAGTACCGACAACTTGCCGGAGTCAGGCTGCT GTTTCCGGCTAACATTCAACCCAAAATAA >Rfer_3454 histidine kinase ATGTCACCCCATCAAACAAAGCTACTCAGCCGCGTTGGCCTGTTTCTGGG TTTTGTGACCCTCATCGCCGGAGCCAGCCTGTTCGCCTTCCGCTTCAGCT TGGCCATGGGCCTGGCCGAGTTGCAGGTCACCGGGCGCCACCGGTTGGAC CTGTACGCCACCAGCCTGGAGCGGGAAATCGACAAGTACGCCTACTTTTC CACCACCCTGGGTCTGGAGCGGGACGTGCTGCAAATGCTGGCCGCACCCC ACCCGACCCGGACGGCGCAGGTGAACCAATACCTGGAACAGCTCAACGAG CGGGCTGGCACCCTCTCGATCTACGTGCTGGACAGCAAGGGCAAAGTCCT GGCCACCAGCAACTGGCGCCGGCCCGACAGCTTTCTTGGGGAGGATCTCT CTTTTCGTCCCTATTTTCGCCAGGCCATGGAGACCGGCAGCGGGCGCATC TTTGGCATCGGCACCACCCGGGGCGAGCCCGGATACTACCTGGCCTCGTC CTTGACCAATGGCCAGGGCACGGTAGGCGTGGCCGTGGTCAAGGTGGGCC TGCAACAACTGGAAAAATCCTGGGTCACGGCGGAAGCGCCGGTCCTGGTC GCCGATGAGAACGGCGTGGTCATCCTAGCCTCGGTGCGGGACTGGAAGTT CACCACCCTGACACCCCTGGACGAAGCCACCCGCCGCGCCTTTGACCGCA CCCAGCAATACAACCGCCGCGCCCTCAATCCCTTGGGCGTGGTGGAAATG ACGGCACTGGAGCACGGCGCCCGCCTGGTGTCCCTGCCCAAGCTGGGGCC GGAGATGGTCTCCATGTTTCCCGTCGCCGGCAAGTTCCTGGCCCAGACCC AGCCGCTGCCCGGCAGCCCCTGGAGCATCACGGTCTTCTCCCTGCAGGAG CAGGTGCGTGGCATGGCAGCCAACCGGGCGGCCGTGGCTGGCGTGGGCGC AGCCTTCCTGTGCATCCTGACGCTGATGCTGAACGAGCGGCGACGCCATC TGAAAGACCGGCTGGCGGCCCGGGAGGCGCTCCAGCAAGCGCACGACGAA CTCGAACGCAAGGTAGTGGAGCGCACCGCCGACCTCTCTGCCGCCAACAC CCGCTTGCAAGTGGAGGTGGCAGAACGCACCCGGGCCGAGCGCACCTTGC GTGCCGCTCAAGACGAGCTGGTCCAGGCCGGCAAGCTGGCCGTTATCGGC CAGCTCTCCTCCGGCATCGCCCACGAGCTGAATCAACCGCTGGCGGCGCT ACGCACCCTCTCCGGCAATGCCCGCAAGTTCCTCGCCCGCGGTGACCAGC AGACCGCTGACAGCAACCTGAATCGCATCGCCGACCTGGTGGATCGGATG GGCCGCCTCACGGGCCAGTTGAAATCCTTCGCCCGCAAGTCCTCGGGCCG CCCCCAGGTCGTACCGCTGCGCCGGGCCGTGGATAACGCCCTGTTCCTGT TGGAGCAGCGCTTGAGGCGCGCTGGCGTCGTGGCCTGCATCGATCTGTCG GACGAAGAGCTGCAAGCCTGGTGCGATGCCAACCGGCTGGAGCAGGTGCT GGTGAATCTGGCCGGGAACGCCCTGGACGCCATGGAAGGCCAGCCGGCAC AAGCGCTCGACATCACCGCCCGGCGCCAGGGCGAGCGGATTCTGATCCAG GTGCGGGACCGAGGGCCGGGCCTGTCCGCGCAAGCACGAACACACCTGTT CGAACCGTTTTTCACGACCAAGGAGGCAGGCAGTGGCCTGGGACTCGGCT TGACCATCTCTGCCGGTATCGTCGCCGATTTTGGCGGCAGCCTGTCTGGC GACAATCATCCAGAAGGCGGCGCCATCTTCACGCTGGACATTCCAGCCGC CCCAGGAGGGCCAACAACATGA >Rfer_3096 periplasmic sensor signal transduction histidine kinase ATGCGCCTGTTCGATTTGAGTCTGCGTTTCAAGCTGCCTCTCTGGGGCGG CGGATTGATCTTGGCAACGGCGCTCGCTGTGTCAACCTCGTTCGTCGTGC AGGCATGGGACAACCTGAATCACGATCTTCTTCAAAACGCCGAAGACATC GGGCGCACCATGGCCCCTTCCCTTTTTCCGGCAATCCTTCACGACAACGT TTGGGGTGCCTTCGAAATCGTCTCTCTACCCTTCTCGGCAAACCCGGAAA CTGCACTTTATGAGAGTCTGATCGTCGTTGACAACGATAAAAAAATTTAT GTTTCATCCCGCCCGCAGGAGCATCCGGTGCTCAGTGAATTGGCTCGACT GGGCCCGGAGTATCAAACCCTCAGCGAGGACCTCCCGCTAGCGCCAGATG CCGGCATTTTTACTGTCTCCATGCGTGGTGCGCAACGAATTTTCGTCGCC GTGCCAATCGCCAATGACGGCGTGCGACTCGGCACCTTGATCGTCTCCTA CAACAAGTCCCTGCTCTGGCAACGTTTTCAGATCGTTCTAGTACGCTCCA TTTGGATCACATTACTGGCATTGGCAGTGCTTCTGCCTATTACAGCTTAC TGGGGGCGCCGCATGATGCTGCCTATGCGATTGGTGACAGAGCGCATCAG CCGCATCGGCAGCGGCGACCTTGAAGCCCTTGACCCGGCGCTCTACCCCT ACAAGGACGAAGTAGGACAACTTTTTTTGGCCTACGAAACCGTCCTCACC AAATTGCGCGAAAAGGCCGAATTCGAAAAAGAAATGCTCAAGAGCGAGCG CATGGCCGCGGTCGGGCGCCTGACGGCCAGCATTGCGCACGAAATCAACA ACCCCTTGGGCGGTATGCTCAACGCCATCAGCACCCTCAAGCGCCACGGC AACCCGGACCCGGTCACCCAAAAGACGGTCTCATTGCTGGAGCGCGGCCT CTCGCAGATTCGAGAAACCGTCGCTGCACTATTAGTCGAGGCCAAAGTGA AGAGCCGCCCCCTTGACGCCGCCGATCTTGAAGACATCCACATTCTGGTT ACCCCAGCAGCCAACAAGCAGGGCGCACATCTGTCTTGGGTGGCGGCGCT GCCACACGCACTGTCGCTGCCCTCGACGCTGGTACGCCAGATGCTCATCA ACTTACTGCTTAATGCCATTACGGCTGCCGGTCGGGACGGGTTGGTGGCG GTACGGATATTGGCCAGCGAGTCGCAATTGGTAATGGTCGTGGAGAACAG TGGTCGACCACTATTGCCAGAACAATTGGCACGTTTGTTTGAGCCATTTA CCAGCTTTTCGGAGAGCGGCAACGGTCTGGGTCTTTGGATTTGTTACCAG ATCGTCACACAACTGGGCGGTACCATCAGTGCCGAATCGAACACTGAATT GACCCGCTTCACCATCCTCATTCCATTGAACCCCCAAAGCGATGCAAACC CAACGCAAAATTTGCCTGATTGA >Rfer_2317 protein serine/threonine phosphatases ATGCCTAAAGGCTACCGTCTCACCGCATCAACCGGCATCCACAAGGGTGA CCGCGATTATCAGCAAGACCAGGTTGTATTGCTGCGCCACGCGCGGGTCA GTGGCTGTGTGCTGGCCGTACTTGCAGACGGCATGGGCGGACGCAGCGGC GGACGCAAGGCCTCCGATCAGGTCATGATGACGGCCCGGCAACTGTTTGA GCGCTACGCGCCCGAAACCGACGATGCCGTGGTCGCGTTGACACAACTAG TACAGGAGGCCCATACGGTCATCAGACTGACCGCTGTTTCATCGGAAGAA GAACCCCACAGCACGGTGGCGGCTTTTTTGATCAATCCCGGCGGTGACTG CTACTGGGCGCACGCCGGCGATTCAAGAATTTATCACTACCGTGGCAACA AGCTGATCAAGCGCACCCTGGATCATTCCTACGTTCAGGCGCTGGTCGAT CGGGGTGAACTCACCGAAGAGCAGGCCAACGCACATCCGCAATCCAATAT TCTTCTGGGTTGTCTGGGAACCGAAAACGATCCACCGGTCAGCACGCATT TCATTCCCCAACTGCACGCGGGGGACATCCTGATGGCTTGCAGTGATGGC ATCTGGCACTACTTCACGAGTGATGAAATCGGATCGGTTCTCGCCACCCT GTCCGCCAGGGAAGCCACCGAGTTTTTGATCGAAAAAGCGCGCTCCCGTG GCCATGGCAGCGGCGACAACCTGTCATTGGTGGTGGTCAAGCTCGAACCG TTGGGAACCTGA >Rfer_0905 CheD, stimulates methylation of MCP proteins ATGTCTCGCAAGAAGAAACCGATTGATATTTTTTTGCAGCCGGGCGAATA TTTTGTCGCCGACGCTGGCTACCAGATTCGCACCATGCTGGGCTCGTGTG TGTCGATCACCTTGTGGCACCCAGCGACACGCCAGGGTGCAATGTCACAT TTTTTGCTTCCCACACGCGGCGCGTCCAAGCCCAAACAAACGCTGGACGC ACGCTATGGCGACGAGGCGCTGAAGCTGATGCTGATTGAGCTGCAGCGCC TGGGCATACCCTCGGCGCAGTGCCAGGGCAAGATATTTGGCGGCGGCAAT ATGTTTCCGGGCAACTTGCGCTCTGGCGCCTTGAACGTCGGGCAACGCAA CGGCGAAGCAGCGCTGACCTTGTTGCGTGAACACGGGATTCCCGTCATGT CCGAGAGCCTGTTTGGCATTGGCCACCGACAAATCGTTTTTGATGTCAGC AATGGCGATGTCTGGTCGCACCAGGTCATGCCCATCGGGACCGACTCCGG GGATAAAGGAGATTTACTGTGA >Rfer_3027 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ATGGCACTTTACTTGATTGGCGACGTGCAGGGCTGCAACAGCGCCTTGCA GCGCTTGCTGGATGAAATATCTTTCTCCCCAAGCCGCGACACCCTCTTTC TGCTGGGCGACCTGGTGAACCGCGGGCCGGATTCGGCTGGCGTGGTGCGA CGTCTGATGGGCTATGGCGCAGCAGCGCAATGTCTACTGGGTAACCACGA CCTGCATCTGCTGGCCATCGCCTACGGCGCGCGCCGGCCGGGCCGGCACG ACACACTGAATGGCATTCTGGATGCACCCGACCGGCAGGCGATGCTGGAC TGGCTCAGGTGGCAGCGCATGGCGATACTGGAACAGGTCGCAGGGCATGA CGTCCTCATGGTGCATGCCGGCGTCCTGCCAACCTGGACCGCAACCCAAA CCATGGCCCTGGCGAAGGAGGTGGAGTCGGTACTGCGCGGCGCGGCGCTG GGCGAATTTTTGCAGCAGATGTATGACGACCAGCCTGACCATTGGGACGA GGCGCTGACCGGCACGGCCCGCTGGCGCGTGATTGTGAACGCCCTCACGC GCCTGCGCTTTTGCACGCCGGCTGGCCAAATGGAATTTCGCACCACCGGC GGGCTCGACGCCGCGCCGGCCGGTTATCTGCCGTGGTTTGAGGTGCCGGG TCGCCAGACGTCCGGCGTCATGCTGGCTTTTGGCCACTGGTCCACATTGG GCTGGCTGGGACGCAGCGATGTGCTGTCGCTCGATACTGGCTGCGTCTGG GGTGGTGCCTTAAGCGCCTTGCGACTCGAGAGCGTCAATGGGCAACTGCA GCAGCAGTTGATTCAGGTCAAGTGTCAGCAAGCCCAAAAACCCGGCTAG >Rfer_3088 two component, sigma54 specific, transcriptional regulator, Fis family GTGAAACGTATTTTGCTGATTGAAGATGATCCGATCATGGGCGAGTCGCT GGTGCAGCGACTTGAACTCGAAGGCTTGCAGGTTCAGTGGTGCCACAGCC TGGGTCAGGCCCAGTTAGAGGTGACAAAGGATCACGCTGCCATCATCAGC GATGTGCGGCTGCCTGATGGGCTGGCCACAGACTGGTTCGTGCAGTTGCC CGCGAGCATCCGTTCAGTGCCATGGTTTTTTCTCACCGGTTATGGCAGCG TCAACGATGCTGTGCTAGCGGTGAGGGGCGGCGCCAGGGAATACCTGACC AAACCATTTGATATTGAAAAACTGCTTGAATTGGTACAAAACGCAGTGGC CAATCGACCACTTCCAACGCCAGAAGTGGTGTTAGGTATTTCACCCGCCA TGCGTCGGGTGGAGGCCCTGGTGGTGAAAGTATCACAGCAAAAAGTTTCC GTTTTGCTCAATGGGGAATCCGGTGTTGGCAAAGAGGTTGCCGCACAACT GATTCACCGGCTTGACCCGCGGCCTGACAAGGGTGAGTTTGTGGCAGTGA ACTGCGCTGCCATTCCAGAGACCCTGTTGGAGGCAGAGTTCTTTGGCTAT GAAAAAGGGGCTTTTAGCGGTGCGGGACGACAACATCGTGGCTATCTTGA ACGCGCTGATCACGGCACACTTTTTTTGGATGAAGTGGGGGACTTGCCAG CCAACATGCAAGCCAAATTGTTGCGTGCGCTGCAGGAAAAATGTTTTTTT AGGCTCGGCTCCGAACGCACCACACACAGCGACTTCCGCGTGGTGGCGGC CACTAACCGGGACCTCTATGCCGACATGACGGCCGGTCGGTTTCGTGAAG ACCTGTTTTACCGGCTCGCAGTCATCCGCATCAATTTGCCGCCGCTTCGG GAGCGACCCGAAGATATTCGCTGGCTAACCGAACGTCTGCTGGCCACTAT GGTGATAGAACAGAGCCGGCCACTGGCCATGTCAGAAGTCTTTATGCGCG ACATCATGGGGCGCGACTGGCGTGGCAATGTGCGTGAGTTGCGCTCTTAC CTGGAACAGGCGGTCGTCATGAGCGACGCAGGCATTCTGGATGAACCGCT GCCCGACCATCCGCACAACCGCGGCCCAATCCCTGCGCCGCCGACGGAAG CCATCATTCCTTTGCAGGCCATGGTGGAAGACGCAGAGCGTGTGCACATC CGTAAGGCCTTGAACCGGTGCGAAGGCAGCGTCGGCAAGACCGCAGAGTT GCTCGCCATCTCGCGCAAGACATTGTGGGAAAAAATGAAACGACTGGCGA TCAGCGCCTGA >Rfer_1869 two component transcriptional regulator, LuxR family ATGCAAACAGTCTCTCCCCAACCGATTCGCATTTTGGTCGTTGACGATCA CACCCTGTTTCGCCGGGGCCTGACAGCGCTTCTGGCGCGCGATCCCCAGT TATGTGTCATTGGGGATGCGGCGGATGCCGGTCAGGCGTTGCGCAAGGCA CAGGAAATGCAACCAGACCTGATCCTGCTGGACAACCACTTGCCCGGCGT CAACGGCGTGGACGCCCTGCCCGCCCTGCGTGAAGCCGCACCCAACACCG TGATCCTGATGCTGACTGTCAGCGAAGATGAAAACGACCTGGCGGCGGCC CTGCGCGGCGGCGCCGCCGGGTATCTCCTTAAAACCATCGAAGGCGATGC CCTGACTGCCGCCATCGTGCGTGCCATGCAGGGCGACAGCGTGGTGGCGC CCGAGATGATGAACAAGCTGGTCGCCGCCTATCGGGGGACAAGTAAAGAA GTCCCCGGGATCGGCACAGCGCAGCCCCCGGCCGTCAGTGCCGGCCCTGC CATGGCCAGCCTTTCACCGCGCGAACGCGACATATTGCGTGGCATTGCGC GCGGCGCCAGCAACAAGGAAATTGGCCGCGAGCACGGTATTGCAGAAACC ACTGTCAAGATTCACGTGCAGCACATTTTGCGCAAACTCGACGTCAGTTC GCGTGTGCACGCTGCTGTCATTGCCACCGAGCAAGGCCTGCTCTGA >Rfer_0897 response regulator receiver domain protein ATGATCAAGATCTTGCTGGTGGACGACAACCTGACCTTTCTGACTGCGGT CAAAAAGTTTCTCGCCATGCTGCCCGACGCACAAGTGATCGCCGAAGCGC ATGACGGGCGGCAGGCATTGGCCCAAGCGGCCCAATGGCGGCCCGACCTG GTGTTGCTCGACATCATGATGCCTGGCTTGAATGGTCTGGAGGTTGCAAA ACTGATGCAAGCCTGGCCGCAAGCTCCGCACATTGTCTTTCTATCCATGC ACGACAACGCGTCTTACCGAGCGGTCGCGCATGAGTTGGGGGCGCTGGGG TTTGTCGGCAAGGCCGATTTTGTGGCTGAGTTGCTGCCGATCATTGCAAG CCTGGTGGCCACTGGCGGCGCCCATCCTACTGGAGACAGCGCATGA >Rfer_1889 response regulator receiver domain protein ATGACGCTGGTCGTGGTTGAACCAGCTGGTCCGGCGCTACACTGGTCGAC GAATTCGCTGGAATACCAACACGAGAGCCGCCCATCCATGGACCACCCTT CCCCCAAATCCGTCTTGATCGTCGACGACAGCCGTGTCTCACGCTTGCTG ATCAGGTCCCTGATCCTGGCCCAGTTTCCGCACTGGACCGTCACTGAGGC GGTAAGCGGAGACGAAGCGCTGGCACTGGCCGCGGCGCGGCCCTTTGATT ACTGCACCATGGACATCAACATGCCGGGCCTGCAGGGAACCGAGGCCACC GAGCAGTTGCTGAAAATGCAGCCGACCGTGCGCGTCGCCCTGTTCTCGGC GAATATTCAGGAATCGCAACAGATTCGCGCCACGCAGTTGGGTGCGCAGT TCGTGGCCAAGCCGGTGACCCCCAAATCGGTGGCCCTGGCACTGGCCTAT TTTCAGGGGTAA >Rfer_3391 putative PAS/PAC sensor protein ATGAAAGCTGGTATGGCGGTGCACAGATTCCTGTCTCAGGGAAATCTGCT GCTGTCCATTGTTTTTGCTGTCTTGATCATTTTTCTCGCGCTCCCCCATT CTTTTGCTGAATCAGCCAATCAGAATAAACTCGTTTTTCTGGGCAACAAG AATATAGCCCCGGTGGTCTACCAAAATAATATGGTCCCGGCAGGCGTTGT GGTGGACATCGTTCGTGCACTTGAAAAATACATGCCCCAGCCGATTGAAA TTAAAACCATGGATTGGCTGGAGGCGCAAGCGCTGGTGGCACAAGGGAAA GCCGATGCGCTTATTCAAATAAACCCGACGCAGGAGCGTCGGGAAATATA TGATTTTTCAGATACCTTGCTTGAATCCCAGTTTTCAATTTTTACCACCA CCAACAGGGTTGGCATCTCGGGAATGTCAAGCCTTCGCGGCCTGAGGGTT GGCGTGGAGGCGGGGGGCCTGCCTCAGCAGTTATTGGGGAAAGACCCGCA AATTCTGCTCACCATCATCCCAAATTTTATCGAGGGATTTAAACAGCTCA ATGCTGCCACGGTGGATGCCGTGGTGGTGGACTACCGGGTTGGGTCTTAT ATCATTGCCGAAAACAAAATACAAAATATCAGGGTGACGGGTGAGCCTGT TGCATTTTCTTATTCGTCCATTGCGGTGAAGAAAGGAAATGAGAAACTGC TCAGTGCCATCAATAATGGCTTGAAGAGTATCAAAGCGGATGGTAGTTAC CAAACTGTCATCAATAACTGGAAGCCCAAAGAGGTTGTGTTTCAGACCCG GGAACAGATCACCCAAAGAATCTACTACGTCTCGGTCATCACCTTATTCA TATTGTTCCTGATTGCAGCCACATGGACAATGACCTTGAAAAAACAGTTG CTCAGAAGAAAGGCGGCGGAAGAGCGACTGGGAGAACAGTATTCCACTTT GAGCAGCATCATCAACAGTGCCAATGCACTGATCTTTTCTTTGGACCGGC AGTACCGCTACACCAGTTTCAACCAGGGGCATGCCGACGTCATGAAAGCG CTTTACGGGGCCCAGATCGAGCAAGGCCACAGTCTGCTGGACTACATGAC CGTGCCGCAGGATCGGGAAACCGCCCAGCACAACATTGATCGGGCGATCG CCGGAGAGCAGGTTGTGGAGGAGTCGTATTCAGGAGATGAACTTCGGTCG CGGCAGTATTTCCAGGTCTCGCACAGCCCGATCAAGAGTGGCGAAGATGT CATCGGTGTGGCGGTGCTGGCCCAGGACATGAGCGCCCGCAAGCGCTCGC AGCTAGCCCAGGAGTTGAACTCCCAACGCATGCAAATGCTGCTGCAACTC AACCAGATGGCCGGGGCAACGCTGAAAGAGATCGAGGATTTCACCTTGGA AGAAGCCGTACGCTTGACCCAAAGCAAAATCGGCTACCTGGCGTTTGTTA ACGAAGATGAGAGCGTGCTGACCATGCCCGCGTGGTCAAAATTGGCCATG GCAGAAGGCGTCATCACCGAGGAGCCGATCGTGTACCCGGTCGAAACCAC GGGGCTCTGGGGCGAAGCGGTGCGCCAGCGCCGACCCGTCATCACCAACG ATTACAACGCCGCCAACCCCTTGAAAAATGACTGGCCGCGGGGCTATGTC AACCTGAAACGTCACATGAATGTGCCCGTGTTTGACGGCGCCAGAATCGT CATCGTGGCGGGCGTTGGCAACAAGGTCGAGGCGTACGACGAAGGGGACG TACAGCAGTTGACCCTGATCATGGAAGGCATGTGGCGGCTGCTGGAGGGC AAGCGCTCGCAGGAAACTCTGCATCGATTGAATCGCGAACTGCGCGCCAT CAGCAGTTGCAACCAGGCCTTGTTGCGCACGCAGGACGAGCAGACCCTGC TCAACGACATTTGCCACATTGTTTGCGACGAGGCCGGCTACCGCATGGCC TGGGTGGGCTATGCCGAGCACGATGCGGGCAAGACCGTCCGTCCGGCGGC CTGGGGTGGTTTCGACAGCGGGTATATCGCCGACGCCAAATTGTCCTGGG CTGAGGACACACCGCGCGGGCAAGGTCCCGCCGGAGTCGCGATCCGAAGC GCAGAGATCGTCTATTTTCAGGATCTGGCCAACGACCCAAGCATGGCCCC GTGGCGCGAGAGCGCCTTGCAGCACGGCTATCGTTCCGGCATCGCCTTGC CCTTGAAAAACGAAGGCGCAGAAGTATTCGGCGTTCTGCTGATTTATTCG GCCGAGATCAACGCCTTTAGCCCCGCCGAAATCCGGCTTCTGCAGGAGCT GTCGGGCGATCTGGCGTTCGGCATCACGGTGCTGCGCGCCCGCCTCGAAC GCACGCGAGCGGAAGAAGCGTTGAAGAACATGGCGATGAAATTCCGAACC ATCTACGAATCGACTTCCGATGCCATCATGCTGATCGATGAACAAGGCAT CTTCGACTGCAACGCGGCCACGCTGCGGATATTCGCTTGCCAGGCACGGG ATGATCTGGTTGGCAAACAGCCCTCCCAGCTGTCCCCGCCGACCCAGCCC GGTGGTGAAGAGTCGATGCAGCTGGCCAATGAATATATCGCTACGGCCTA CAGGAATGGCAGCCATCAGTTCGAATGGACGCACCGTCGCCTGGACGGTG CACAGTTTCCCGCCGACGTGTTGCTCACTGCCATGGAACTGGGCGGCAAG CCGGTGCTGCAAGCCACGGTGCGCGACATCACCCGGCGCAAGCAGGATGA ACTGGCGCTGGCAAGAGCCAACCGCGCCTTGCGCACCCTCAGCGCCTGCA ATGAGGCGCTGGTGCGCGCCACCAACGAATCCGGGCTGCTTGATGCCATT TGTCGGCTGATTGTGGAAACCGGCGGCTACCGCATGGCGTGGGTGGGATT CCCCGAGCAGAACGCGGCGAAGACGGTGCGCCCGGCGGCCCACTACGGTT ACGACGAAGGTTTTCTGGCCGAGGCCCCTATCAGTTGGGCCGACATTGAG CCTGGTCGTGGCCCGACCGGCACAGCCATTCGGACCGGCACCGTCCAGGT CAATCAGAACTTCCTGCTCAACCCGGCCTCGGCCCCGTGGGGAGATGAGG CACAGTCGCGCGGCTACCAGTCCAACATTGCGCTGCCGCTCACCAGCGAA GCGGGCACCTTGGGTGTGCTGACCATTTTTGCGGCGGCACCCGATGCTTT CAACGAAACCGAAGTCATCCTGTTGAAGGAACTCGCCAGCGACCTGGCCT TCGGCATCGCCACCTTGCGCACGCGGGCTGAACGCGACCGCATTGCCTAC GAACACCAGCACCATGAGGACATACTGCGCCAGAGTCTGGAGGACTCCAT CAAGGCCATCGCCGACACCGTGGAAATGCGCGACCCGTACACCGCTGGCC ATCAGCGGCGCGTGGGGCAACTGGCAGTCGCCATCGCGCGCGAACTGGGT TTGCCGGAAGACACCATGCGAGGCATCGAACTCGCCGCCAGCATTCACGA CCTGGGAAAAATCAGCATTCCGGCGGAAATTCTCGCCAAGCCCATCAAGC TGACGGCCATCGAATACATGCTCCTGAAGAATCACCCGCAAGCCGGCTTT GACATTCTCAAAGACATCAGATTCCCCTGGCCCATCGCCACCATGGTGCT GCAACACCATGAACGCCTGGACGGCTCGGGTTATCCGCAGGGACTCCAGG GCGAGCAAATCCTGCTCGAGTCGCGCATCATGGCGGTCGCCGATGTGGTC GAGGCGATGGCCTCGCATCGCCCCTACCGGGCGGCGCTGGGCGTTGATGC CGCGCTGGCGGAAATCGGGCGCGGCCGCGGTGTCATCTATGACACGCTGG CCGTTGATGCCTGCCTGCGGCTTTTCGCCGAGAAACGGTTTTCGTTTTCA AGCTGA >Rfer_3083 periplasmic sensor signal transduction histidine kinase ATGACAAACATTGGTCTGACCCAGCCAAACCGAACTTCGCATCGAATTCC ATGGCTTTTTGGGCTGGGATACATACTTGTTTTTCTATTGCTCGACTGGG CGAGCTACATACGGCCTTTACAGGGTCTCAATATCACGCCATGGAATCCG CAACCGGCGGTTGCCGTCGCATTGCTGCTATTGAATAGGCGGTGGCTGTG GATTGTCTGGGTAAGCCTGATAACGGCTGAGTTGGTCGTGCGCGGAAATC CAGCCGACTGGCTTGTAGTATTGACATCAACAGCCGCGCTCAGTCTGGTT TACGCTGCCATTGCCCATAGCTTGACAACTCGAATGGATCGCGCGCTGGC CTTGGCCACACAAAAAGATCTTTTGTGGTTCACTGGCATCGTCATGACGG GAGCACTGCTGAGCGGTGTGGTCTACATCACAGCATTCTCAGTGGCAGGT CTAGGGCCGAGTGGTCCAACCTACGAGCCGATCGTTCGATATTGGATTGG CGACGCCGTGGGTCTAATCGTGCTGCTGCCAATGCTTCTCGTTGTAATGG ATCCCCTACGTCGGGCCACACTGCTCGAAACGCTTAAAAGCCGTCAGTGG TGGGCCGTCGCTGTTCTAACGTGCTTGCTCCTTTGGGTCGTGTTTGGTCC AGGTGGGCAAGACCATTTCAAATACTTCTACTTACTGTTTGTGCCTGTTG TCTGGGCATCAGCCAAGCTGGGGGTACCTGGGGCTGTGCTTGCCTCGGGC CTGACCCAGTTGGGACTGATCTTCGCCGTGCAATCGGTACCCAACGAGGA CCTGACGGTGTTCGAGCTTCAGGTGCTGATGGCCGCAGTTACCATGACAG GTTTACTTCTTGGCGTTGCCGTTGATGAAAGAACTCGCGCAGCCGCTGAA CTTCGCGGCAGCTTGCGCATGGCTGCGGCCGGCCAGATGGCGGCGGCGCT GGCCCATGAATTAAGTCAACCCCTTACAGCACTGAGCAACTACGCCCAAG CCTGCCAAATGCTCGTAACCGACGCACCCGGCCTACAACCGGATCATCGT GACCAATTGGTCGAAGTTATGCAACGGATGGTTGACGATGCCAACCGTGC TGGTAATGTAATCAAGCGTTTGCGCGACTTTTTCAGGACCGGCTCCACAC ATCTGCACTTGATCTCACCAACGGCCATCGTCAGAGAAGCAGTGCAAGTT CACCTTCGCCGGGCCGACGCACTGAAACTGCGTATGGAGAGCCAAATTCA GGACAACTTACCGATGGTATGGATGGATCCTATCCAGATCGCCGTGGTCC TGCGCAATTTAGTCACGAATGCCATAGACTCTGCCGCAGCGACAAGTAGT GGCGACCTCGTGGTGATTCGGGCGTACGTCACCGATGGCGAGTTGCTGAT CGAAGTTAAAGACAATGGCCCCGGCGTCGGCACGGCTCGCCTGCAAACCC TGTTTGAGGCCGGACCGTCGGACAAGCCGGGCGGCATGGGAGTTGGTTTG AGCATCTGCCGCGCGATTGTTGAAGCCCATGGGGGCAGACTCTGGGCTGA ACCGGGCTCAGAAGGCTGCTTCCGCTTTACGCTGCCAGTGGAGAGCGAAA ACCATAGCGAAGTTAAAAATGCATAA >Rfer_0629 UspA ATGACAATACTTGTAGCTTATGTGCCACGCCCCGAAGGTCAGGCCGCCCT GGACAAAGGGATCGAGATTGCGCAACGTCGCAATGAAAAGCTGGTGGTGG TCAACGCCAGCCCCGGCGGCAAGAAGGAAGATGCGTCGTTTGCCGATGTC CAGGACTTCGAGCGCGTCCAGCAGTTATTGGAAAACACCGGCCTGGACGC AGAAGTCAAACAGTTTGTGCGCGGCAAAAATGCCGTCGAGGAAATTGAAG CCCTGATCGAGTCCTTGCCGGCCTCCCTGCTCGTCATTGGCATGAGAAAA CGTTCCCCGGTGGGCAAACTCATCATGGGCAGCGTGGCCCAGGAGCTTCT TCTTTCCGTTTCCTGTCCGGTATTGGCGGTCAAGTCGGCTGGGTGA >Rfer_3932 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) GTGAAAACGCGCTCCAGTTTTGAAACCAAGGTGCTGGTCGCGTTTACCGC TGCCGTGCTGGTGGTTGCGGGACTCGCCACCACCACCTGGAAGGTGGCGC AAGGCGCTGCCGAAGCGGCACACTGGGTAGCGCACACCCACGAGGTGCTT GATAGCCTTGCCCAAACAAGGGCAAACACGCTTCAGATCGAATTCAGCAC GCAAAGCTACAGGATTTCGGGCGACCCGGCGCGACTTGCCGAACGCGATG CGACGATTGCGACGCGGGAAACCCTGCTGAGCCAGGTCAAGCAGCTCACC AGCGACAATGCCCGCCAGCAGGAGCGCTGGATGCGGCTGCGCGAGGTCAT TGATGAACGACTCGCAATTTCCAGACGTGTCGAATTCTTGCGAAAGACCC AGGGCCTCGAAGCCGCGAGCGCATTTGTGGCAAGCGCTCCGCTGCAGGAA ACGCGCGAGCGCACCTACGGCCTATTGCGCGAGATGAACGAAGAGGAGCG TCGGCTCTTGGAGGACCGCAATGCCGAGCAGTTGCGTGCGCGCCAAAGCA TGGTGGCTGCCGGCGCGCTGGTCGCGCTCTTGCTGCTCGCGCTGCTTACG GCCACCTTTGGATTGATTCGGCGTCAGTTGCGCGAAACCGAAGCAAGTCG ACGCGCGCTCGCCGACAGCGAGGAGAGCCTCTCCACCACGCTGTATTCGA TCGGCGATGCGGTGCTGGCGACGGACACCGAGGCACGTATCACGCGCATG AATCCGGTTGCGGAAGCTCTCACCGGCTGGCCCTTCGCCGACGCGCAGGG CCGCCCCGTCGAGGAGGTATTTCGTATTGTCAACGAACACACCCGGGAGC CGGCCGAGGTGCCGGTGGCCAAGGCGCTGGCCACTGGCGAAATCCAGGAG CTGGCCAATCACACTGTGCTGATCGCGCGCGATGGCAGCGAGCGCCCTAT TTCCGACAGCGCGGCGCCGATACGCGATACCAGGGGACGGGTGGGCGGCG TGGTGCTCGTTTTCCGAGATGTGACCATTGCGCACCAGGCCCAACAGACA ATCCGCGAACAGAACGAACTGCTGGAACAGCGCGTACACGAGCGGACGAT TCAACTGCACGAGAGCGAGGATCACCTGCGCAGCGTGATCAGCAACGTGC CCGTGATGATCGCCTACGTCGATGCGCAGCAGCGCTACATCTATGTCAAT CAGTCGTACCGGGAGCGTTTCTCGCCCGGGCAGGCCGACATCGCGGGTCA GACGGTGCGCGACATCCTGGGCCACGAACGCTATGCCGTCGCCGCCCCAC TCATTGCCAAGGTGTTGCAAGGACAGCCGCAAAGCTACGACTGGCAACCC TTCCCCGGTGTCTGGCAGCTCGTCAACTACGTGCCCAAGCGCGATGCCCG GGAAGGGGTGGTCGGCTATTACGTGCTGGGCACCGACCTCACCGAGCGTA AACACGCCGAGGAAAAGATCCGCACGCTCAATGCCGAGCTCGAGCAGCGC GTGCGCGAGCTGGAGCATGTCAGCCGTGCACTGCGCACCCTGAGCGCGGG TAACCGCACCATGCTGCGCGCGACCGTCGAGCAAGGCTTGCTCGACAATA TGTGCCGGGCCATCGTGGCCAACGGCGGCTATCAAATGGCGTCGGTGTGG TACCGGATCGATGATGAATTCAAATCACTGCGGGCGATGGCGGAAAGTGG TCACCCGGGCGGCCTCGACGCTCTGCATCAGATGAAGGGTAGCTGGGCCG ACAACGAGTACGGCGGCGGCGCGGTCGCCTCTGCGATCCGCACTGGGCAG GCCAGCGTGGTCCAGAACATCCTCGCCGATCCGAATTACGCACCGTGGCG GCCCTATCTGCCAGGCTATGCCTGCGTCATTGCCTGCCCGCTGCGCGTCG ACGGCGAGATCATCGGTGGGCTCGCCATTTACTCTGCTGAGCCGGATTCC TTTGGATTGGATGAAGTGACGCTTCTCACTGAATCGGCTGATGACCTGGC TTTTGGCATTGCCACCCTGCGCGCACGCGCCGAGCAACAAAAAATCCAGC AGGCAATGGAGCGCCTGACGCGCTACGACGCCCTCACGGGACTACCCAAC GAGACTCAATTCACGGAGTTCCTCGCTGCTGCCATAGATGCCGCCAAGCG GCTCAACCAGCCATTCGCCGTGCTGCAAGCCAATGTCGAACGGCTGAGTG AGATCAATGATGCCCTTGGGTTCGGCCACGGCGATCAATTGCTGCGGGAG TTCGGAGCACGGCTATGCGTCGCCGCGCCGGCGTCTGCCATGGTCGCGCG CCTGCGGGGTGATGAATTCGCGATCCTGCTGCCCGACAGCAACGCCAATA GCGTCATCACCATGCTGCAACGCGTGGAAGACGTGTTGGCGCAGCCGTTC CCGGTCGCCGACATTGCGCCAGATGTGTCGGCCAAAATCGGTGTCGCGTT GTTTCCACAACATGGGGCGACACCCCACGACCTGTTCCGGCATATGGACA TGGCTGTGCACCAGGCCAAGAAAAAAGGTGTGAAGCACGCCATCTTCGAT CCAGACCTGAACCAGGACCAATCGCGCCGTCTGACTATGGCCGGGGAACT GCGGCGGGCGATCGAGGGTGGTGATCTGTTGCTCTACCTGCAGCCGAAAG TGGAGATCACCACCGGTCGCTTGTGCGGCGCCGAAGGACTGGTTCGCTGG AAGCACGCAGAGCGTGGGCTGATTCCGCCGGGCGAATTCATTGGGCTCGC CGAACAAACCGGGCTCATCAAGCCGCTCACCGAATGGGTGATCAAGACCA GCTTGCGCTTGAACCAGGCCTGGCAGTATGAAGGCTGCGCACTGCCAATC GCCGTTAACCTTTCTGCACACAACCTGCACGACGAAAGGTTGCTGCAAAC AATCCGCCACTTGCAGACCACATATGGCGTGGCTGCCGGCCTGCTCGAAC TTGAAAACACCGAGAGCGCGGTGATGGACGACGCCGAATTCGCACTGCGT GTATTGCACAGCCTGCGCGATGAAGGCATACCGCTTTACATCGACGACTT CGGTACCGGTTATTCCTCGCTCAGCTATTTGCAGAAACTACCGGTGGAGT ACATCAAGATCGATCAATCGTTTGTACGCGACATGACAATCAGCAGGGAT TCCTCGCTGATCGTGCGATCTACGATCGACCTGGTCCGTGACCTCGGACG CAAGACGGTGGCCGAGGGCATCGAGACCCAGGAACAATGGGATCAACTCG CCGCATGTGGTTGCGATATCGCGCAAGGCTACTTCATCGCCAGACCGATG CCGGCCGAGGACTTCCAGAACTGGGTCAAACAATTTCGTGCGCCTGTCAC GACACCGTCGGGTAAAGCCTGCGGAACGCCGCTCGACATTCAGTCAGCAA TCTCATAA >Rfer_2453 histidine kinase internal protein ATGTTTACAGAAATAAACCACCTTGTTCTGGTCGGCGACCTGATGCAGCA GATGTGCGTGTATCTGGTGGTTGCCTACCTCTTGAGCAAGACGCCACTAT TTGCGCCATTGATGCAGGTCACCGTGCGCCTGCCCGACAAGCTAGTCTGT TATTTTGTTTTCTCGGGCTTTTGCATCATGGGCACCTATCTTGGCTTCCA GATCGAAGGCGCGATTGCCAATACGCGTGCGATCGGTGCCGTGCTTGGCG GTCTTCTGGGTGGTCCCCTGGTTGGCTTCGCGGTCGGACTTACTGGCGGT CTGCACCGCTATTCACTTGGTGGTTTTTCGGCCTCGGCCTGTGCCGTTTC GACCATCACAGAAGGCATCATCGGCGGCTGCGTGCATCTCTATCTGCTGC GTCGTCATCAAGCCGACCGGCTGCTCAGCCCGATGATTGCGTTCGGTACG ACGCTGGTCGCCGAACTGGCGCAGATGAGCATCATTTTGCTGATGGCCAA GCCATTTGATAAGGCAGAGCATCTGGTGGCCCAGATCATTCTGCCGATGC TCCTTACCAACTCGTTTGGCGCCGCCTTGTTCATGCGCTTGATTCTGGAT CGCAGGGAGACATTGGAAAAGTACTCAATTGCATTTTCGGCCAAGGCATT GCGCATTGCCGAGCGTTCCGTTGGCGTATTGATGCAGGGCTTCAACGAGC AGAACTGCGCCCGTATGGCCACTATCATTCAGGAAGAAACCGGTGTCGGC GCGGTCGCCATTACGGATTGCGAGAAGCTGCTTGGTTTTGTCGGCGTTGG CGCAGATCACCATCTGCCAGGCACACCCATTGCTTCATCGCACACTTTTT ATGCCATCACCCACAATGAAGTTGTTTACGCCGACGGCGCCGCTGTACCC TATTGCTGCTCGGTGTCAAAGGACTGTAAATTGGGTTCCTGCTTGGTTAT ACCGCTGCGCGGCGAGCAAAACCGGGTATTCGGGACCATCAAGCTTTATG AGCCGACATCGAAATTTTTCTCCTCGCTCAACCGCACCCTGGGCGAAGGT ATCGCCCGCCTCTTGTCCAATCAGGTTCTGGCCGGGAAAATCGAGGAGCA GAAACGGCTGCTGACGCAATCAGAAGTCAAACTGCTGCAGGCGCAGATCA ATCCGCACTTCCTATTCAATGCGCTGAATACGCTGGCGGCGGTCATTCGA CGCGATCCGGAAGCGGCTCGACATCTCGTGCACTACCTCTCGACCTTTTT TCGCAAGAGCCTCAAGCGCGTCGGCAATGACGCCACACTCAAAGATGAAA TCGAACACGTCGATGCCTATCTGCGCATTGAACTTGCACGCTTTCCTGAC CGCCTCAATGTCGAAATCGCGATTGCGGACGAGTTGTTGGGTCTGCGACT GCCTGCCTTTTCCCTGCAGCCCATTGTCGAGAACGCCATTAAACACGGCA TTTCGCAGATGCTCGAGCCAGGCAAGATCACCATCAGCGCGCAGCTGGAA AACAAATTGTTGACTATTTTCGTTGAAGACAGCGCCGGCCTGTACCAGCC GAGACCGGATAGCGACGGCTTGGGCATGAACCTGGTGGATCGACGTATCA AGTTGCGCTACGGCGTCGCCTATGGGGTCGATGTGACGTGCCAGCCAGAG AGTCTTACCAGGGTTTCCATCTGCCTACCCATTGAAGAAGAGCTTGTCCC ATGCTAA >Rfer_1826 response regulator receiver domain protein ATGAACAAGACCATCCTGCTGGTTGAAGACAATCCGGACGACGTGAAGCT GACACTGCGCGCGTTCAAACGCAACAACATGCTGAACCCGATCATCGTGG CGCGGGACGGCGTTGAAGCGCTCGATTTCCTGCTTGCGCGCGGTGCCTAC GCCGAGCGCGCCAGCAAGTCATTGCCGACGCTGATCATTCTCGACCTCAA ACTCCCCCGACTCGACGGCCTGGGCGTACTCAAGGCGATCCGCGCCGACG AGCAGACCCGGCTCATTCCGGTGGTCGTCATGACGTCATCCAAAGAGGAG CAGGACCTGATCCAAAGCTACTCACTGGGGGCGAACAGCTACGTGCGCAA GCCCGTCAACTTTGCCGAGTTCCTGGAGGCGGTGAGAGTTCTCGGCATCT ATTGGATGATGACGAATCAACCGCCGCCGGAGCGCAACACCACATGA >Rfer_0921 two component transcriptional regulator, LuxR family ATGAGTGATACAGCCTTGACTCTCTATGTGGTTGATGACGACGAGGCACT AAGGCGCTCGCTGCTATTGCTGTTGTTTTCTCAGGGAATGGCGGTACGCG GCTTCGAATCGGGCGAGGCCTTTCTGCAGGCCGTTGATGCGCGGCAGGTC GGGTGTGTCATCCTAGACCTGCGCATGGGCGGTATGAGCGGCCTGGCGGT TCTGGAACAACTGCGCCTGCGCCATAGCCCGTTGGTTGTGCTGTTTCTTT CAGGGCACGGCACCATCCCGATGGCGTTGGAAGCCGTGGGCCAGGGTGCG TTCGACTGGGTGGTCAAGCCCGATACGCAGCAGTTGCTAGAGAAATTGCC ACTGGCAATGGTCGAGGCGCAGGCGCGGGCCGATGCGCTGGCACTCTGGC ACGATCTGACGCCACGCGAGCGCGAGGTGGCGCGCCAGGTTGGCCTGGGC CAGTCGAACAAGGAAATTGCCCGCAAGCTGGTTCCGGCCTGCAGTCCTCG TTCGGTCGAGACGCATCGAGCCAGCCTGTTTGCCAAACTCGGTCTAGCCA ATGACAACGAGCTGGGACGCTGGCTGACACGACATACCTGGCTGGGTTAG >Rfer_4030 diguanylate cyclase ATGTTCGTGGCAAGCGGAATGCATATATTTGCAAAGAACTACGGCGTTGC TGCCTGGGCACTTCTGGCGCTGCTTTTTTTGCTCTATCCCCATGTTCAAT ATTGGCGCGCGGCCAGAGCCGCCGATAGCGTGAAAACGGAGTTGGACAAC CTGCTGATTGACTCTTTTTTACTGGGCCTGTTCATGGCGGCACTGGAATT CCCCCTTTGGCTAAGCTTTGCAGCCATCATGGCCACCTTGACCAATAACG CGGCCAACAAGGGCTGGCCCAGTGTGCCGAAAAACGTGCTGGCCATGCTG GCCGGCGCACTGATATGGGTCACGGTGCGCGGATTCAAGTTCTCGCCCGA TACCGGCTGGCCGCTCACGATTTTTTGCATGGTGGGCATCTGCGGCTATG TGCTCGTGATCGGCAATGTCGGATTCCAAAGAAACCTCCAGCTGCGCCGG GTTCGGGAGGAGTTGCGAACGCGTGAACAAGAACTGTTGAAAGCCAACCA GAGCCTGGTCGTCAATCTCCAGGAAATTGAAGCCCTGCAGCAACAGCTGC GTGAGCAGGCCAGCCGGGATTCGCTGACCGCGCTGTACAACCGTCGCTAC CTCGACACCACGCTGGACAGAGAACTGGCGAGCTGCAAGCGCGAAGGCAA GCCCCTGTCCCTGATCATGATTGATGTCGATGACTTCAAGAAATACAACG ATCTTCACGGCCATCAGGCCGGCGATCAGTGTTTGATCGCCGTTGCGAAA ACCTTGCAGGCGAGCGCCAAGCGGGCCAGCGATCTGGCAGCGCGATATGG CGGTGAAGAATTCTTGCTGGTCTTGCCGGGCATGGACGCGACGGCCGCAC AAGGGCTGGCCGAGGAGCTGCGCCGGTCCGTCGAAGCGTTGAAGATTCCC CACGAGCAGTCGCGCGGCGGCAGCGTCACCATCAGCATCGGCCTGGCGGT CATGACGAATGACAGCCACAAGGATGTCGCGGGTTTATTGCGCGCCGCGG ACGAAGCCCTCTACCACGCCAAGCATGGCGGGCGTAATCAGGTTCGCCTT GCTACGCAAACGCGCCGTGCGGCGCGCGTGGCGGAAAGTGTCGCGGTGAA TCTGGTTCAACTGGTCTGGCATCCGGCCTACGAATCGGGTCAAGCCGAAC TTGACGCCCAGCATCGAGCCTTGTTTGGGCACGTCAACAACATCCTTGCC GCCTTGCTGCTGGAGCGACCGGTCGACGAGGTTGCAGCACTCATTGACAC GCTGATTGGCGATGTTGCCAAACATTTTGAGGACGAGGAAAAAATCATTT TGGCCGCCGGTTTTCCCGGCGCAGCGGCGCATGCCGCCATGCACCGTGAA CTCATCGCCCACGCCGGCTATCTGGTCAGCCGCTTTAAAACCAGGGACCT TGACAGGGGGGAGCCGTTTCAATTCCTTGCACATGACCTGGTCGCTCGGC ACATACTGGGGGAGGATCGTGAGTTTTTCCCCCATTTGAGCGCCTAA >Rfer_3370 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGTTGACGACGCCGGCCTCGCACCACAAACCGACGCAGCCCATGCGGGT GGCCGGGGTCGTCTTCTTGCTGGCGGCCGTGCTCAGCGCCGGTCTGATCT GGCACCAGGAACGCCAGCGCAGGGAGCATGCGCGCGCCGAGGTTTACACG CTGGCACAAGACCATGCCAAAGCAGCCCGGGAACAGCTGGATCGCGCCCT TTCCGCCATCTACGCGATGGCCGCGCTGGTCCAGCAAGGCCGTGGTCAAG TGGATAACTTCGACGCCGTGGCCGCCAGGATGCTGCCGTTTTACCCAGGT GTGTCGGTGCTGATTCTCGCCCCGGGCGGCGTTATTCGTAACGCGGTGCC GCTGGCCGGCAATGAAAAAGCAATTGGCCTGGATTTGCTGAAAGACCCGG TGATGCAGCAGGAAGCGCAGCGGGCGCGATCGACCGGGCAACTCACGCTG GCCGGTCCGCTTGAACTCAGGCAAGGCGGCTTGGGCCTGGTGGCCAGATT ACCGATCTACCTCGACAACGCTCAGGGCACGCCAGAGTTCTGGGGTTTCA CCAATGTGGTGATGCGTTTTCCGCAGACCCTGGAGTCGGCCCACTTGCCC AGCCTGCTTCAGCGTGGGCTGGATTACAAACTTTGGCGCGTCAACCCCGA AACAAGGCAGACTCAGATCATCGCGGAATCACAGTCTGCGCCGTTGATCG AGCCGGTCATCCAAGGTTTTGAAGTACCCAACGGCGCCTGGTCGCTCAGT GTGGCGCCGCGACTGGGCTGGGGCGACCGGGCAGGTTTGGCCGGCAAGAC TTTTATCGGACTGTTGTTTTCATGGCTGCTGGCCTATCTGGCCAAACTCC TGACGCGCCAACGCGCCTACAAGATCAATCTGGAGCAGCAGGTGACTGAA CGCACTGCCGAAATCCAGGCGTCAGAGCGCCAACTCAGCGCCACGCTGGA CGCCATACCGGATCTCTTATTTGAGATGGACTTGAACGGACGTTACCTGC TGTGCCATTCGCCGCGCGCCGCCGACCTGCTTGACGCACCGGTGCAGGCC CTGCTTGGCAAGACGGTGTCCGAGGTGCTGCCCCCTGCGGCCGCCGAAGT GGTGCTGCAGGCCCTCAAGCAGGCGCATGAACTCGGTCTGGCCCACGGTC AGCAATTTGAACTGGCATCGCCAGAGCAAGACCGGTGGTTTGAGCTTTCA GTGGCGCGCAAGGCGGTCAGCGCGGGCCAAGAGCCGCGCTTCATCGTGAT CTCGCGCGAGATCACCGAGCGCAAACAAGCCGAGAAAGACATCCAGAAAC TGGCCTATTTCGATGCGTTGACCAGCCTGCCCAATCGCAGCCTGCTCAAC GACCGCATCCGCCACGCCCTGAGCGAGGCCGACCGACGCCAGGAATCACT GGCCTTGATGTTCCTGGACCTCGACCACTTCAAGAACATCAATGACACGC TCGGGCACGGGGTGGGCGACCAACTGCTGGTGGCACTGGCGGCGCGGATG CAGTCGGTCGTGCGCGAACAAGACACGGTGGCGCGCCTGGGGGGTGATGA GTTCATCCTGCTGCTGCCGGACACCGGCTCCAAGGGCGCGGCGCGCGTCG CCCAGAAGTTGCTGCAAACCATCAGCCTGCCCGTGCAGATCGGGCCGCAC GAACTGACGGTGACGCCCTCCATGGGCATTGCCCAGTACCCGCGGGACGG CGACGATCTGGAGACACTGTCCAGACGCGCCGACATCGCCATGTACCGCG CCAAACAAAGCGGACGCAACGGCTACCAGTTTTACACGACCGAAATGCAG CTCACGACCGACCGCGCACTCCAGATTGAAAACGCCTTGCGCCGCGCACT GGAGCGCGATCAGTTGCGCCTGCACTACCAGCCCCAGTTGTCGCTCAGCA CGAACAGAATCGTCGGCGTCGAGGCGCTGCTGCGCTGGCAGCATCCGGAA CTGGGGCAGGTCGCACCGGCCGAATTCATTGCGATTGCCGAAGCCAGCGG TCAGATTCAAGGCATCGGTGAATGGGTGCTGCGCACCGCTGCCCAGCAAG CCAAACAATGGCGGGATCTGGGCCTGGCGCCGATGACGATGTCGGTCAAC CTCTCCGCCGTGCAGTTTCGTCACCCCGATCTGCCCGAACTGGTGGCCAG AATACTGGCCGAGGCGCAACTGCCGCCCCAATTTCTTGAACTGGAGTTGA CCGAAGGGGTGGCACTGCATGACCCGCTGGGCGCCATTGCGGTCATGGAG CACATGCACCAGCAGGGCGTGAAGATTTCAATCGATGACTTTGGCACCGG CTACTCGTCGCTGAGCTACCTCAAGCGTTTTCACGCCCACCAGCTCAAGA TCGACCAGTCGTTTGTACGCGACATCACCGACGACCCGGAAGATCTGGCC ATCGTCAATGCCATCATCAGCATGGCCCACAGCCTGGGCATGAACACCAT CGCCGAGGGGGTTGAAACCCAGGCGCAATTGACGTTGTTACGCGCGCAAG GCTGCGACGAGGTGCAGGGGTATTTCTTTTGCAGACCCCAACCACCAGAA GAACTGGTGGCTTTTCTGCGTGCGCACAGTTGA >Rfer_1540 transcriptional regulator, Crp/Fnr family ATGATGAACGTTCAAACATTACCGAGCGCGGCTCGCTGGGATCACTCTTT CCATCAACCTGCGCTCAAGCTGGAGAGTGACGAGCGCTGGTCGGACTTCT CTGAGGTATTGAGCCTGTTGCGTTTTGATGGTCATTTGCAGGGGCTCAAT GACACCAGCCTGTTCCGGCGGCGGCGTCTCAAGGCGGGCCAGACCGCGTT GGGCATGGGTCAGGTGTTTGACGGGCTTTATGTGGTTCGCCTGGGCGCGC TAAAAACAACGATGACCCATGTGGATGGCGCCGAGCATGTGCTGGCCTTC CCCATGAAGGGCGACCTGCTGGGTTTTGATGGTGTCTGCAAGAACAAGTA CCTGAGCGAGGTGACGGCCTTGACCGACTGCGACCTGATCAAGATTCCCT CCAGTGAGCTGTTTTCACCTGGGCGCAGCTGCAACGACATTGAGCGCATG GCCTATTGGGCCATCAGCCGCGAGATTGTTCAGGAGCAGTCGGCCTATTC CTCCTACCATTCAACCAAGTCTGAAGCGCGCGTGGCGCGGTTTTTACGCA TCCAGTCAGAACGCTTCAACACCATGGGCTACTCGCCCAATCGCTTCACT TTGCCCATGACGCGGCGCGACATCGGCAACCACCTCAATGTGACGCTGGA GACAGTGAGCCGGGCCTTTTCGGCACTGGATCATCTGGGCATCATTGCAG TGGAACGGCGTGAAATCAAAATCCTCTCGCTGGAAGCGCTGCGCAAATTT GAGCATTAG >Rfer_1456 diguanylate cyclase TTGAATTTGAAAGCCGTTGTGCTTTGCGGGTTGACCTGCGTGCTGGGCCT GCTGGCACCCGCGCTGCACGCATCCCCCAGCTCGGCAGACGCCAGTTTTC CGGTTTTTGAGGTGTCAGCTCAGACACCCGGTCGCATTGACGTAGACACC CGCATGGGCATGTTGACGGACAGTACCCGAACCCTGACACCTGACCAGGT CATGTCGCCCAAGCAAACCTGGCAGACCATCACCCGAAAATCGCCCAACT TTGGTTTCACCGAAGACGCCTACTGGTTTCGCTTCCAGATCGACAACCTC GCAAGCCAGGACCTTGCACGTTTCGTCGAGTTGCCAATCCCCTTCCTTGA TGACGTGCAGCTGTACCACTACACGGCCGGCCAGCTCAAAACCAGCTACG CCCTGGGTGATGAAAAGCCCTTTGCACAGCGAGTACTTCGACACCAAAAT TTCGTCATGCCCCTGAATCTGGCGCCCGGGGCCAATTTGATCTACATCCG CCTGGCCTCATCGGGCACGATTGAAGCACCTTTTCGAATCTGGGATCCGA CCCAGTTTTATGAGACCAACGGTAACGAAAAATTATTACAGGGCATGGTG ATCGGCATCCTGCTGATCATGATTGTCTACAACCTGTTTGTCTACTTTTC AACCCGCGACATCAACTACCTTTTTTACATTGGATTTGTCGCGAGCTACC TGCTCTTTCATCTCACCTTGAACGGCTACACCTTTGCCTATGCCTGGCCC AACGCGGTGCGTTGGAACAGCTTTGCCATCTCCACCTTTATGGCCAGTGC AGAGTTGTTCACCTGTCTTTTTGCCGACGGCTTTCTCAGGCTGAGCAAGT TTTCAAGGCCAGCGCACTACCTGACACGGGCACTGGCAACAGTCAGCGCC CTGCTGTTGGCGCTGACCTTTGTTTTGCCCTACAGCCTGACGGTGCGTGT GGGCGCCGCCCTCACCATCCCCATTGCTTTGACCGCGTTGGCGCTGGGCT ACTGGCGGTGGTGGCGCGGCGCCAAATTCGCGCGCTTTTATTGCCTTGCC TGGACCACCGTGCTCATTAGCCTGTGCGTCCTGAATGCCAGCAAATTTGG TTTGATACCGTCCAACGCCTGGACCCACAATGCGTCCCAGATTGGCATTG TCTTGTTGGTGCTTTTGCTGTCATTTACGCTGGCCGACCGGATCAACCAT GATCGCATGCTCAGGGTCAACGCGCAGGCTGTGGCATTGGGCCATGAACG CTGGGCGCGCGCCTCTCAAGAAGCGCTGATCAAGACCAAGGAAGATGCCA ACCGCGAACTGGAACAACGGGTCACGGCGCGCACCAATGACCTGAACCGA ACGCTGGGTCAACTCAAGCTGGCCAACGACCAGCTGCAACGCCTGTCCAA CATGGACGGACTGACCCAAATCGGCAACCGCGCGTTCTTCGACCGCGCCT TGGCCCTGGAACATCGGCGGGCTGACCGACAGAAAAGTCCGCTGTCGCTG ATCATGATTGACGTTGATCACTTCAAGCTGGTCAATGACAGCTACGGTCA TATGGGCGGTGACGCTTGCCTGCGCGCCGTGGCCCATTTGCTGCAACCCC GGATTCAACGTGTCGGTGATGTGCTGGCGCGTTATGGTGGAGAGGAATTT GTCATTCTGCTGGTTAACAGCAACCAGCAGGATTCGGTGGCGCTGGCCGA GGGATTTCGCGCGGACATCGAGCAACTGCATGTGCCTTTTGAAGGCGGCA CGATTCACGTCACCGCCAGCTTTGGCGTGGCCTGTGGCATACCCGACCAG TACCTTAGCCCACAGGAGTTGTTGGCCCACGCTGACAAAGCGCTTTATCA GGCCAAGCATGACGGGCGCAATTGCGTCCGGTCTGTGGCGACGATCAACC GTGTGAGCTGA >Rfer_0891 metal dependent phosphohydrolase ATGAATGCAGCCACCCCATCAAAAGACATTGACGTCAAATTGTTCAGCAT GGTGCTCTGTTTTTCCAGAGCGATCGATTTTCTTCACCCGAAGATTTCCG AACACCATCTCCGGGTGGCCTACGTTGCATCCTGTCTGGCCGAGGAACTC GGCCTTGGCCAGGGGCAAATCCAGGAAGCGCTAATCGCCGGCGCGCTGCA CGATGTGGCGGCCGTGTCGTCGGCGATGCACTTCGACTTGTTTGATGATG CTTTGACCCGCTATCACGTTAGCACCAGGCAGATTCCCGACCATCTGCAC CTGCACGGATGGGAAGGCTATCTGTTGCTGCGCGACTTTGCGCCCTTTGC CAAGGCCGCATCCGCGATCCGCTTCCACCACGTGAACTGGGACTTCGGCC ATGGCCGCGAATTCGAGGGAGAACAGGTGCCCCTGACCAGCCACATTCTG CATCTGGCGGATCGCATCGCGGTTCTGCCGGACGACGATCGCCATGTTCT GGAACAGGTGGCCGGCATCCGCCAGGCGGTCGCCACCGGAACCGGGCGCT GGTTCATGCCGGCGGTGGCGGCGGCCTTTGACGGAATTTCCGAAAAAGAG TCCTTCTGGCTCGATCTGACCAGCCGACACAAGGAAGAAATCATCAGTCG CCGTTTCGGCGGTTCGAAGGTCAGCCTCGATCTGGACGGTCTTTACCAAC TGGCCAGAATATTCGGCAAAATCATTGACTACCGCAGTCCCTTCACGGCG GCGCATTCCAGCGGAGTCGCCGCCACGAGCGAGGAGCTGGCCCACCGGCT TGGCATGTCGCCCACCGAGAGACGATTGATCGGGGTGGCCGGGAACTTGC ATGACATCGGAAAACTTGCGGTGCCCACCGAAATACTCGACAAGCCCGGC AGGCTGACGCCACAGGAAATGTTCATCATCCGCCAGCATCCCTATTACAC GCACCGGATTCTGTCGACTGTGCCCGGCCTGGAAACGGTCAACACCTGGG CCTCACTGCATCATGAACGTCTTGATGGCAGGGGCTACCCGTTTCGACCA CGCGAACTGCCACTCGGCTCGCGCATCATCGCGGTGGCGGATATCTTCAC TGCGATCACCGAAAACCGCCCTTATCGCCGTGGCATGGACCGGATGCAGT GTCTGGCAGTGCTCGACCAGCTCGTCGCTGAGGGCGCCATCGACGGCGAT GTGGTGGCGGTGTTACGTCATGATTTCGACCAGATTCATCACATCCGCCG CCGGTCGCAGTCAGCGCATGCGAGCGACAGCGACATGACTGCTGCCGGCG CTCTGTTGCCCTCAGCATAA >Rfer_1092 periplasmic sensor signal transduction histidine kinase GTGAGCCCGGGCGACACGCTGGCGGGGGAGGGCGCTGGCTCGGGCACGGC GGGCCATGGCTTGTCGCTCAAACGGCAACTGCTGCTGTGGTTGTTGTTGC CGCAGCTGGTGCTGTGGTTGGTGGGTGGCGCCCTGGCCTACCGGATTGCA TTGAGCTACGCTGAAAAAGGCATCGACCAGTCCCTGACGCAATCGGTGCG CTCGCTGGCGCGTCAGGTCAAGCCGATCGGCTCGGGTCTGCTGATCGACT TTCCGCGCGCGGCACAAGACATCATTGAGCAGGATCCGCAAGACCGGGTC AGTTACCTGGTCTCATCGCCGCCGGGGAGTTTCTTGCTGGGCAACGGCCG CTTGCCGGAGCCGCCGCAGCGTCTCAGCCCGGTTCCCGGCGAGCCCTTGC TGTACAACGCCGTGGTGGACGGCAAACCGATGCGCGTGGCGTTGCTGGAA GTCAACTATGGGGAGGCCACCTCGCCCCAGCGCTTGCGGGTGCAGGTGGC CAAGAGTCTGGTCGTGCAGCGGCGCCTGACGACGGAGCTGGTGGCCGACA TGCTGGCGCCCTTGCTCTTGTTGGGCGTCTTGCTGAGTGTGCTGGTGTAT GGCGGTGTCTCCCGCGGCCTGCTTCCGCTGACCCGGCTGCAGGCGCAACT GGGGCTGCGGCGCGAACAGAATGTGTCGGCGTTGTCGCCGATCGAGATGA CGCAGGCGCCGCAAGAGGTGCACGCGCTGGCGCAAGCGGTCAACCAATTG CTGGCCGCCGTGCGGCGCAGCCTGGGGCAAGAAAAGCGTTTTTTGAACGA CGCGGCGCATCAGTTGCGCACGCCGCTGGCCGGCTTGATCAGCCAGACCG AACTGGCGCTGGCCGAGACCGATCCGCAAGCCCTGCACGCGCGCCTGAGC AAGGTGTTGGCGGGCGCCCAGCGCAGTGCGCACCTGGTGCAGCAACTGCT GTCACTGGCGCGCAACGAGGCCGAGGTGCGCCTGCAAACGCTCGACCTGG CAGCCCTGGCACGCGAGGTGGCGCGGGATTGGACACCGCGCGCCATGGCC GCCGGTGTGGACCTGGGCTATGAGGGGGCCGACAGTTTAGGTGTGCAAGG TGAAGCCATGTTGCTGCGCGAGGCCATGAGCAACTTGCTTGACAACGCAC TCCTCTATGCCGGTCGGGGTAGTGTGGTGACGCTGCGTGTGAAGCGCTTG ACCCAGCAGGCCGTGCTGGAGGTCGAAGACAACGGTCCCGGCTTGTCGGC GACTGAACTGGCGCACCTGTTCGAGCGCTTCTGGCGCGCCAGCGAGCTGC CTGGCGGCTGCGGCCTGGGGCTGGCCATTGTGGCCGAGATCGCCCAGCGC CACGGGGGCAGCGCCAGTGCGCACGTCGTACAGCCGCACGGCCTGCGGAT CAGTCTCAGCCTGCCAGTGGTGTCGTGGGATACTGCACTCTGA >Rfer_2693 HD-GYP domain-like GTGACCGTCCAGACCGAAAACGAATACGAAGACCTGCTTGGCCTCTGGTC CGATCTGGAGGCGGGCCTGGGCATTATTCTGGGCCGCCCGGCCAGCATTC AGGAGTTTGAAAAACGCGTCTGGCAGTACGACCGCTGGATGCAGGGCCTG CTGGCGCGCGACACCGACGTCGGTTTGTATCTGCTGTTCCAGTTGGCGAC CAACTCACCGGTGGGTTACAGCGCCTCGCACGCGCTGGTCAGCGCGGTGT TGTGCCACCTGATCGCCGTGGAGCTCAAGCTCCCGCAGGGCGAGCGCGAC AGCCTGGTGCATGCAGCCCTGACCATGAACATGGCAATGACGGCGCTGCA GGACCAGTTGGCCAGCCAGTTGGAGCGGCCCACCCCGGCTCAACAGGAAA CCATTCGCACACACGCCACCCAGGGCGCCGCCATGCTGGCCGACCTGGGC GTGCTTGACGCGCTGTGGCTCGACACCCTGGCCCTGCACCATGACGACAG CACGGACCAGGGCGAGCTGCGCGCCCTGCCGCCCGAGCGCCGACTGGCCC GCATCCTGCGCATGGTGGACCGCTACGCCGCCATGATCAGCCCCCGTAAA TCGCGTGAAGGCCGCAGTACCACCGATTCGGCGCGCGCCATCATCACCCA ATCCATAGCCCAGAACGATGAAGTGGGTCATGTGCTGGTACGTCTGGTGG GTGTGTGTCCACCCGGCACCTATGTGCGCCTGGACAGCCAGGAGGTGGCC GTGGTGGTACGCCGCAGCGACACCCCGAACCTGCCTATTTTGGCAATCGT GACCAACCCGGCCGGCATGCGGCTGAACCCGCCGCGCCTGCACCGCAGCG CCAACGGCAGCCCTGGCATCCGGGCCGCCGTGCCCACGTCAAGCGTGCAC GACCGCTTGAACCACCATTTGATCCTGCAACTCGGCGCCTATGCCGCGCA ACATCCGTAG >Rfer_2357 CheB methylesterase GTGGGTGGTTCGGCCGGCGGACTGGACGCCTATATCCGGCTGCTGAAAAA TCTGCCGCCCGATATGGGGGTGGCGATCGTCGTCGTCAATCACATCACTC TCATGCCAACGCAGCTGCATCAGGTGCTGCCGCCTTTCACCAAGATGCCG GTGGAGCTGATCACCGAGAACCTGGTGATCGAGCCCAACCATGTCTACAT CATCCCGGCCAACCGCGACTTGCATGTTGATGGCGAAGTATTCCAGCTCA GACCCATCTCCAAGCCGCGCGGCTGGCCGGATGTGATCACGGTTTTTTTG AAGTCCCTCACCCAGTACTGGGACGGCAAGCTGATTGCCGTGATTGTGTC GGGTTTTGACGGCGACGGCGCCGCCACACTGCGTGGCATCAAGGAGGTGG GTGGTATCACCATCGCGCAAAAACCCGGGCACGAGGCCTGA >Rfer_0657 protein tyrosine phosphatase ATGATCCAAAGACTAAAAAATTTCTGCTTTTTTAGGGGTTCCGCACCCAT AAAATGCGCTTCTATGACCAAGCTGCTGATGGTGTGTATGGGCAATACCT GCCGCTCTCCGATGGCGCAGGCCGTGATTCGCAAACTGGCGCTTGAGACC GGGCTTGCGCAGCCATTTGAAGTGGCTTGTGCGGGCACCCACGCGCACCA CCTGGGCGAACGGCTCGACCCCAGAGCTGCGCTGACGCTGACGCGTCACG GCTACGAGATGGGCCGCGTTCGTTCTCGCAGAATTACAGAACAGGACTTC CAGTCCTTTGACCTGATTCTGGCGATGGACAGCAGTAATTTGACTGAACT ACACCGACTGTGCCCAGCCGAACAGGGACACAAATTGCACCTGCTGCTGG ACTTTGCCGAAGAAATCAGTGAGACGGAAGTTCCCGATCCGTATTACGGC AACCAGGAAGGGTTTGAGCAGGTGCTGGCGTTGTGCGAGGCTGGCGCCAG GGGCTTGATCCGGCGCTTGCTCCAGAAACCTTCAAAAATTGATGCCGCAG TACCCCCGGCGGGCTAG >Rfer_0899 response regulator receiver domain protein ATGGCTAAAACAATCATGATCGTGGACGACTCTTCTTCGATGCGAATGGT GGTCACCATTGCGCTCAAGGGGGCCGGTTACAACGTGCTGGAAGGCCGCG ACGGCCAGGATGCGCTTGCCAAGCTCAACGGCCAGAAGGTGCACCTGATC ATCAGCGACGTCAATATGCCTGTGATGGATGGCATCAGCTTTGTCAAGGC GGTCAAGCAGCTGCCCGCCTACAAATTCACGCCGATCATCATGCTCACCA CGGAGTCCGAAGAGTCCAAGAAACGTGAAGGCCAGGCCGCCGGTGCCAAG GCCTGGGTGGTCAAACCGTTCAAACCCGAGCAGCTGCTGGGCGCAGTGCA AAAGCTGTGTCTGCCATAA >Rfer_3344 multi-sensor signal transduction histidine kinase ATGACCCCACCGCCAGACACACACTCCTGGTTTGGTCCTTCACTGCTTGA ACCCGGCGTAGAAAAGGTCGACAAGCCCGAAGAATTTCAGCGGCTTTGGC GCGGCTTCATGACCGCCCGCGTCACTCTGGGTGTGGTGCTGATGTTGCTT CAAGGCAGCATCTATGTGTTGGGAGCCTCCAAAGACAGCGCCTTGCTCCT GATTTGTACCGGCTATTTCGCCGCTGCGCTGGCGGTGCGCCTGCTGGCGC ATCCGCGCCAACTGGGGCGGACGTTTGACGTCCAGTGGATCAGCACAATT GGTGTTGATCTGCTGGCTTTTACCGCCCTGCAATGGGTGCAGGGCAGCAG CATCAACTACGCGCCCCTGTTCGCCCTGCCGATTCTGATGGCCTCCATTC TGGGCTCGCTGCTGGTGGCCATGGGCACGGCGGCGGGCGTGACCTTGTTG TTGTTTGGCTATGCCAGTTGGATGTCCATTCAAGCACCCGGGGAGATGGC CGCCCATTTTTTGCAGGCGGCGCTGACGGGTGCAGGCTGTTTTGTCATTT CGTTTCTGGCCAGCCAGATTGCGACCCGTCTGGTCAATGTTGAGCTGCGG GCGCAACGCAGCCAGTTGGCCGCGCGGGTACAGAGACGGGTCAACGAGCT GGTGATTGAATCTTTGACCGAAGGCATCCTGGTGGTCGATCGGCGCGGCA TCGTGCGTGCCGCCAACCCGGCAGCCCGCCAGCTGCTGGGGTTTGGGCAC AAGCCGGGGGATAGGTCTTTTAATCTCAACGCGATGATTGAATGGCAGTG CCTGGTTGATTTGATGCAGCGCAGTTTTTCCGGGCATGCCGCCCAGCAGG CCGATGTCACCATTCATCCGGCCGGTCAAGGTCCAAGGCATATACAGGTA CGCACCCAGCTAACGGCCACGCAGGCAGGGGATGACGAGCGGCTGTGTGT CATGTTCGTCCAGGATCAGCGCGAGATGCAGGCGCGGATACGAACCGAAA AACTGGCCAGTATGGGCCGCATGTCCACTGCGGTGGCGCACGAAATTCGC AACCCGCTGGCAGCCATCACCCAGGCCAATGCGCTGCTCGACGAAGACCT GATCGACCCCAAACACAAACAGCTCACCCGGATGGTGCAGCAGAACGCCA AACGGCTGGAGAAAATTGTGGAAGACATTCTCAATGTCTCCCGCGTGCAG CAGCTTGAAAGTGTCAACTCAACGCCGGCACTGGACTTGAAGGAATCGGT CGAAAGAATTTGTCGTGACTGGCAAAACCAGACAGCCAGCGAGCACCTGC TCAGCGTCCAACTGCCCCCCGGCTTGATCGAGGTGAAGTTTGAGTCCGAG CATCTGCGCCGGATTCTGGTCAACCTGCTTGACAATGCACGGCGCTACGC AAGTCACCAACTTAACGCGATTCAGGTATCGGTCAGACCGACGACCCTTG AGCATTGCACTCTGAGTGTGTGGAGCGACGGCCAGCCCATGGATCAATCG GTGGAGCGCCATCTGTTTGAACCATTTTTTTCGTCAGAAAGCCGCTCCAG CGGCCTGGGCCTTTATATTTGCCGGGAGTTGTGCGAGGGGCATGGTGCCA CTATTGCCTACGACCGGACCCGGCGAACCATGACTGGCAAGCCTGTTGAT GGCAATGAGTTCCTGGTGACCTTGCGGACTCGGTCCGCAACGAGCAGCGC CCAGATGACCCACAAGCACACACCGGACACACCATGGCATCAAACACAAC GCTGA >Rfer_3168 transcriptional regulator, Crp/Fnr family ATGCTTTCTATTCATACTATTGCCCGGGCCGTTAAGCGAGAAGTTGCTGC TCGGGGTGCGCTCTTGCTCAGGCGCGCCAATCTCTCGCCGTGGGTCACTT ATGTGGAGTCGGGGCGTGTGGCCCTGGGCGTCATGGACGGTGACGTCATG GAGCACCAGTTGGGTGTGGTTGAAGGCCCTTGCTGGCTGGAGGCGACGTC TGCCGTGCTGAACCTGCCGCATGCCGTCGATGCGGTCGCAGAAACTGAAG TTATTTTGCGCCGTGTGCCAGTGGCTGAATTTCTTCGTTCGCTGGCTACG ATGTCGATGTCAGCTCAGACGGTCTTGCGCGACGTCGCCAAGGCGCACCG CCAGCAAACCGAATTGGCGATCAGCCGCCTGGCCAAAGATGCCGAGGCGC GCTGTGCCGAGTGGCTGCTGCAGCATGCCCAGACGGGCGACCGAGGCGTG TTGGCGGTGCTGTTGCAGCAGCGCAAGCGATCGGTTGCAGCACAGTTGGG CATTGCGCCTGAGACATTTTCCCGTGTGTTGCGCCACATGCGTGAGCGCA GCCTGATCAGCGGTTCGGGCCGCACCTTGAATCTGGTGGATCCGGGCGGG CTTCGGTTACTCGCTGGCGTCTGA >Rfer_3942 serine/threonine protein kinase with Chase2 sensor GTGGCGAAATCTTCTTTATCTGAATCGGGTTCTTTCTGGCGCACCGACGG GTTTGTGGGTGTCTTGGTTGTGCTCATTGTGGTGCTGCTGTACCTGGGCA GCGACTTTATTGGCACCTTGGAACGGCGGTTTTATGACGTCGCCAGCACC AACACCAGCAGCTCGCGCCATCCGTCCGACCGGATCGCCGTCATCGCCAT TGATGATCGGAGTATTGCCAACATCGGTCGCTGGCCCTGGCCACGTGGTA TTCATGCCCAGTTGATTGACAAGTTGGCGACCGCCAAATCCAAGGTCGTG GTTTATGCCGTGTTCTTTTTTGAACCCCAGGTTGACCGGGGTCTGAGCTA CATTCGCAAAATGAAAGAGGTGCTGGGCGCCGACGCCGATCCAGCCGGCA CCCCCTCCGCTCGGAGTGAACAGCTGGCGCGGGTGATGACCGAAGCCGAG ACAGCACTCGACACCGATGGTCAACTGGCGGCGAGTCTCAAAAGCGCCGG CAACGTCATCCTGGCTTCGTCTTTCACCTTGGGCGAACCCCAAGGCAACG CCGACCAGCCCCTGCCCGCGTTTGCGCTCAAGAGTGCGCTCGATGAAAAC AGCGCTTTCTCGCTGCCAGCGCTCAGAGGGCAGCAGCCCATCGAGCGCCT GGGGGCGGCCGCAGCCGGTATCGGTCACCTGAACCAGACGCAGGACGTGG ACGGCGCCGTTCGATTTGAGCCCCTGCTGGTCAATTACGACGGCAAGGCG GTGCCCTCGGTGGCGCTACTGGCCGCCACCCAAAGTCTTAACCTGAGCAC CGCTGATATCGCGCTCCATGAGGGTGAATCAGTGCAAATCGGCCAACTGC GCGTAAAAACCGATGCGGCGGCGCGCATGTTGCCCCAGTTCTATCAAGCG CGTGACGGCAAACCGGCCTTTAGCGTGGATTCTTTTGACGATGTGCTCAG CGGCAAAATCCTTGCCTCCAAATATGCAGACAAGATTGTCATCATTGGGG TCACGGCAACGGGCGTGGGTACCCAGTTCCCTGTGCCTGGCAACCCGGCC TTGTCGCCCGCAGAAGCGATTGCGCATGTGACGTCGAGCATCTTGGGCGA GCACTTTATTGTTCAGCCAGGCTGGGGTGCCGGGGCCAGGCTGGCGCTGT TGCTCCTGGCCAGCGCCTATCTCATTGCCGCCTTGCCACGCTTGCCGGCG GGTCGGGCAGCCGTGATCACCCTGCTGTTATTGACGGTTTTACTGGGCAC CGAGTTTGGCCTGTTGTCGGGCGCGGCGCTGTGGCTGAAGCTGGTGTTTC CGGCGACGCTGCTGCTGATCGGGCATCTGGCCCTGACGACCAAGCGATTC TTGATGCCGCAGGCCGACAAGTCCAAGCCGGATGAAGAGTCGGCTGAAAC CAAGCGCATGATGGGCTTGGCGCTGCAGGGGCAGGGCCAGCTCGACATGG CCTTTGACCGGTTCCGCCGCGTGCCCATGACAGAGGCGGTGATGGGTGAT TTGTGCCGCCTGGCACTTGACTTCGAAGGCAAGTGCCAATCGGACAAGGC CGGGGCGGTGTATCAATACATGGCGACCTACAGCAAGGACTACAAAGATA TCAAACTGAAGTTGAACCAGGCCGGGAATCCGTCAGAAGCCGTGCTGATC GGTGGCAGCATTTCCCGTCCGGGGGGCGCCCTGCGGTTCGACGCTGGCGC GATTGAGAAGCCCATGCTGGGGCGTTACCAAGTGGAAAAAGAACTTGGCA AAGGCGCGATGGGTGTGGTGTATTTGGGTAGAGACCCGAAAATTGGCCGG GTGGTGGCGATCAAGACCCTGGCGCTGAGTAAGGAATTTGAAGGTGATGA ACTGGTGGATGCGAGGGAACGCTTTTTCCGCGAAGCCGAAACGGCCGGGC GTTTACAGCACCAGAATATCGTGACGATTTTTGACGCTGGCGAGGAGCAC GATCTGGCCTATATTGCCATGGAGTTCCTCAAGGGCAAGGACTTGGCCGA CTACTGCCAGGGGGGTCGTTTGCTGGCAGTACCCACCGTGCTTTCCATCG TGGTGCGGGTGGCGCAGGCGCTGGACTATGCCCACCACCAGCATGTGGTG CACCGCGACATCAAGCCGGCCAACATCATGTACGAGCTCGAGAGCGACAC CTTGAAGGTGACTGACTTTGGAATTGCGCGCATCACCGATTCGAGCAAAA CCAGGACCGGCCTGGTGTGGGGTACTCCCAGTTTCATGTCGCCCGAGCAA CTCGCCGGTAAAAAAGTGGATGGTCGATCGGATCTCTATTCGCTCGGTGT CATGCTGTTCCAGCTGTTGACAGGCGTGCTGCCCTTCCGTGGTGACTCCA TGGCCGAGTTGATGTCCAAAATTGCGAATGATGAGGCGCGCGACATTTGC AGCATCCGCCCGGCGTTGCCAGCGGCGCTGGCGCGCGTGGTCGCGGTGTC ACTGAGCAAACGCCCAGAGGCCCGCTACCAGGATGGGGCTCAGTTTGCCT TTGAGCTGCGGGCGGTATTATCGGCACTGATGGGTGACGTGGCGGCGCTT GGCGGTGCCGTACCGACGGCAGACCGGCAGGCGTCATCCGTGGCTGAAAA AACGGCGCAGTTTGTGGCAACCGTTCCTGCATCGGCGACAGAATTTGAAA AAACGGTCGTGCTCGCCAGCACAACCTCCACGTTGAAACCGCCCAGCGCC AAAGCAGGCGGCCTTGACACCTAG >Rfer_3149 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA GTGGCCGACTTGCCCAGCCCGGCAGCAGTCAACGCGGCCGCGGCCAGTTT TGCCGGCCTGACGGCCAAACTCGACTACCTGTCAGCCTCGGATCTGGCGC AGGTGCGCCTGGCCTACCGCTATGCCGACCAAGCCCATTTGGGACAACTG CGCAACAGCGGTGAACCCTACATCACCCACCCGATTGCCGTCGCCGCCCA ATGCGCCGACTGGAAGCTCGATGCCCAGGCACTGATGGCGGCGCTGCTGC ATGATGCGCTGGAGGATTGCTGCGTCACCAAAATTGAGCTGATCGAGCGC TTTGGCTCGCCCGTGGCCGAGCTGGTGGACGGTCTGACCAAGCTCGACAA GCTGCATTTCAGTACCCGCGAAGAAAACCAGGCCGAGTCGTTTCGCAAAA TGCTGCTGGCCATGGCGCGCGACGTGCGCGTCATCCTGATCAAGTTGGCG GATCGAACCCACAACATGCGCACGCTGTCAGACGCTCCGCGCGATAAGTG GGCCCGAATTGCCACCGAGACGCTCGACATCTACGCCCCGATTGCGCATC GCCTGGGTCTGAACCAGACCTACCGTGAACTCCAGAACCTGGCGTTTCGC TATTTGCGGCCCTGGCGTTACGCCATTTTGTCCAAGGCGGTGGCCAAATC GCGCGGTCGTCGACGCGATCTGATTCAAAAAGTACAGGAAGAAGTCGACA CCGCCTTCGCCAACAGTGGCATGGATGTGCGCATCGCCGGTCGCGAGAAA ACCTTGTATTCGATCTACAAGAAGATGGAGGAGAAGCACCTCACATTTGC CCAGGTCACGGACATCTATGGCTTCCGGATTCTGGTGCCCAGCGTGATTG ACTGCTACACCGCGCTGGGCACCTTGCACCAGCTCTACAAACCGGTGCCC GGCAAGTTCAAGGACCACATTGCCATTGGCAAGCTCAATGGCTACCAGTC GCTGCACACCACCTTGGTCGGCCCGTCCGGGGTGAATGTGGAGTTTCAGA TACGCACCGAGGCCATGCACCTGGTCGCCGAGTCAGGGGTTGCCGCGCAC TGGTTGTACAAAGTCAACACCCCGCAAGGCACCGGCACCGGCGACTGGCT GGGCTCCAAGTGGCTGCAGTCGCTGCTTGACATCGAAGATGAAACACGCG ATGCCGCCGAGTTTTGGGATCACGTCAAGGTTGACCTGTTCCCGGATGCG GTCTATGTCTTTACGCCCAAAAGCCAGATCATGGCACTGCCCAAAGGGGC CACGGTGGTGGACTTTGCCTACGCGATTCACAGCAATGTCGGCGACCGCA CGCTGGCGGCGCGGATCAACGGCGAACAAGTACCCTTGCGCACCGAGATC AAAAATGGCGACGTCATTGAAATTGTCACCGCGCCGGGCGCCGCCCCCAA TCCGGCCTGGCTCGGGTTTGTCCGCACTGCGCGCGCCCGCTCAAAAATTC GCCAGCACCTCAAGACGCTGGCCCAGACCGAGTCTGAGGACCTGGGCGAA AAGATGTTGGCGCAGGCGCTGCGCGCCGAAGGCATTGAAAAATTGCCGGA CGACACCGGCAGCAATCGGTTGCTGTGGGAGAAGTTACTGCGTTTTACCG GCAACAAGAGCATGTCCGAACTGTTCCTGGACCTTGGCTTGGGCAAACGC ATTGCCAGCATCGTTGCCAAGCGTTTGCTGACCTTGCTGACCGACCGGGG CGAAAAGCCGGACGCCTTGTTGCTCACGCGCGAGCGCTACACCACGAACG AGGCGGTAGCACAAGGCGGCGTCGTGCTCGATGGCAGCGAAAACGCCTCC ATCCGTTTCGCGCCGTGTTGCGGACCGGTGCCGGGCGACGCCATTGTGGG TTACCTGGGACGCGGCGAGGGTTTGCTGGTGCATGCAGCGGACTGCGCGG TAGCCCAAAAGCTCAAACTCAATGACAGTGAGCGCTTTATTGACGTGCAG TGGTCGGACGACCCGGTTCGCCCCTTTGAAACCGAGGTGCGGGTGACGGT CGTCAATGGCCGCGGCGTGTTGGCCCGGGTCGCTGCCGCCCTCGCCGCTG CCGAGGTCGACATCACGCACATTGACATGGAAGATGAAGCCGCGCAGGAC GCCACTGACTTGCGTTTTGTGATTGCCGTGCGTGACAGCAAACAGCTTGA AACCGCCTTGGGCAATCTCAGAAGAACACATGCCGTGCTCAAAGCGCAAC GGTCCAAAGTCACCCAATAG >Rfer_0782 two component transcriptional regulator, LuxR family ATGCAAATGAGTTTTGTGGATGCCCCACGTGCTGTGATCGATGCCCCGTC AAGGCCGATCAGGGTGTTTCTGGTTGACGACCATCAAATCACGCTTTGGG GCCTGCGACGGCTGATCGAAGCCACGAACCCGCGCATGGAGGTGGTCGGC ACCGCCAGTTCACGCACCGAACTACTGAACCATGACGCCGCCGCCACCGC AGACGTCATCCTGCTCGACCTTGATCTTGGTGGTGAAGACGCGGCCGCCT CGCTCGCCGACCTGCGCCAGCGTTGCCCTGGGCGGGTGCTCGTGCTGACC GCCAGCGATGACCCTGCCCAGCACCGCGCCGCCATGGTGAAGGGCGCGCG CGGCGTGATCCACAAGTCAGAGGCGGCGGAAACCATTCTGCGCGCCATCG AGAAGGTCAACAACGGCGAAGTCTGGCTGAACCGCGCGCTGCTCGGTGAA GTGCTCGGCATGCTGACTGACGACAGCCCCGCGGCAGCGCCGCGCCAGGC CGACCCCGACGCGCAACGTATTGCCAGCCTGACGACCCGCGAACGGGAGA TCGTGGTCACCATGGTGCACTGCGCCGGCGCCAAGCAGCTCGCGGTGGCC GACGAACTCAAAATGAGCGAACATACCCTGCGCAACCACCTAACCACCAT TTACGACAAACTCGGCGTGCGCGGGCGGCTGGAGTTGCATGTTTTTTCCA CCATGCATGGGCTTGGTGCGGCGACAGGCAGAGCGTGTGGTGCATGA >Rfer_3373 two component transcriptional regulator, LuxR family ATGGTCAAGGCAGACAGCTACCGCTATGCTCGCGGTAGATTTGACAACAG CAAGGCAAAGCAAGTGTGGCGTGTACTGGTGGTTGAGGATGATCCGCAGA CGCGGGATTTTTTTTCGGGCAGCGTGTCGCGCTGCGCCGAACTGCTGCTG GCTGCCAGCGTGGGCACGGTGGCCGAGGCCAAGGCCTGGCTGGATGACAG CGCGAACACGGTCGATGTGCTGCTCACCGATCTGGGCCTGCCCGATGGCA GCGGGCTGGAGGTGATCCGCCATGCGACGCGGCTGAACCCCGCCTGTGAG CCGCTGGTGATCTCGATGTTTGGTGATGAAGACAACGTGCTGGCCAGCAT CGAGGCCGGCGCGCTGGGCTACATCCACAAGGATTCGACGCCCGACGACA TTGCGCAGACGATTTTGGACATGCGGGCCGGCGCCTCTCCCATTTCTCCC ATGATCGCGCGCCGCGTGCTGTCCAAGTACCAGTCTGATCGTCGAGAGAA CAATAGGGTGCTAGCCCCCGTCCTATCATCGTCTATAGCTATAAAAAGCG AAGCGACTGAGGACGGTGAGGCGAAGTCGCAGCGCGGCCTGCTGTCGCCA CGCGAACAGGAAGTTCTGGCCTTGATCGCCCGCGGCTTTTCGTATACGGA AATTGCCCGTTTGCAGGGCTTGAGTGTTCACACCGTGCAGACGCATATCA AGAACCTGTATGGAAAATTGTCCGTGCACTCCAAAAGCGAGGCGGTGTTT GAAGCCACGCGCATGGGTTTGCTGTCGCCGCATGACTGA >Rfer_3951 periplasmic sensor signal transduction histidine kinase GTGACTATTCCCCACCACGAACAGCGTTCCCTGTTCGGTGAAATCCTGGA CTGGATGCTCACGCCCCTGTTGTTGCTGTGGCCGGTCAGTCTGGTGTTGA CCTGGCTGGTCGCTCAAAACATTGCCGGCAAGCCGTTTGACCGGGCACTG GAGTACAACGTGCGGGCGCTGGCGCAGCTGGTCACCATCAGCGACCAGCG GGCGCAATTTCAGCTGCCACTGCCAGCGCGCGAACTGCTTCGTGCCAACG ACGCTGACACGGTCTATTACCAGGTGCTGGGCACGCGCGGCGAGTACCTG AGCGGCGAGCGTGAGATGCCCTTGCCGCCCAAGGAAGAGGCCCTCGAGCC GGGGGAGGTTCGCGTTCGCGACGACGTGGTGCACGGCGACGAGGTCAAGG TCGCCTACACCTGGGTCAAGCTGCCGCTGCCCGGCGCCAAACCGGCGCTG GTGCAGGTGGCTGAAACCCTGGAAAAACGGTCCCTGCTGGCGACCGAAAT TGTCAAGGGCGTGATGTTGCCGCAGTTTGCCATCCTGCCCATGGCGGTGC TGCTGGTGTGGCTGGCGCTGGTGCAGGCCATCAAGCCGCTGCATCAGCTC GAAGAGCGCATTCGGGCGCGCAAACCCGATGACTTGAGCCCGATCGAGGC GCAGGCCGTCCCGCTGGAAGTCGCACCCCTGGTGCATTCGGTCAACGACC TCCTGCTGCGGCTGAAAGATTCGATTGCGACCCAAAAGCGTTTTCTGGCC GACGCGGCCCATCAGCTCAAGACACCGCTGGCGGGGCTGCGCATGCAGGC GGAACTGGCGCAACGCGAGGGGGCGAGCGCCGAAGAGTTGAAACAATCGC TGCGCCAGATCGGCCGCGCCAGTATCCGGGCGACCCACAGCGTCAACCAG TTGCTGGCGCTGGCACGGGCCGAAAGCAGTGGCCAGGCGATGCCGCGCCA GGTCTGCGATCTGGCCGAACTGACCATGGCGGTGGTGCGCGATTGCGTAC CCAGGGCGATTGAAAAACAGATTGATCTGGGTTATGAAGGCACGCAACCG GGCACCGAGTCAGGCCAGTTGGCGGGTAACCCGACGCTGATCAAGGAGCT GATACGCAACCTGGTGGACAACGCCATCAACTACACGCCGTCCAGCCTGA GCCAACCCGGCGTCATCACGGCGCGGGTGCTGACCGACCCGTTTGGCAAG ACGCTGATGCTGCAGGTGGAGGACTCCGGCCCCGGCGTGCCGGAGGTCGA GCGCGAGCTGATCTTCCAACCCTTTTACCGCGCGCTGGGGACCGAGGCCG ATGGCACCGGCTTGGGCTTGCCGATCGTGATGGAAATCGCGCACCAGCAC AACGCCACGGTCAGCCTGGAGCCCACCCACCCCGGGCAGACGCGCCCGGG GGCCCGCTTCAGCGTGCGCTTTTGGGCCAGCAGTTCTGAGGCGGCGCCGG CCTGA >Rfer_1372 response regulator receiver domain protein ATGGCTATCCATAAAGTTCTGATCGTGGACGACTCAAAAACCGAGTTGAT GTTCATGACCAATTTGCTGCAAAAAAACGGTATGTCGGTGCGCACGGCAG AGGGCGCTGATGAAGCGCTGCGCCGACTCGCAGAAGAAAAACCCGATCTG ATCCTCATGGACGTGGTGATGCCGGGCCAAAACGGTTTTCAACTGACGCG GTCCATCAATCGTACGCCCGAGTATTCGGATATCCCCATCATTATGTGCA CCAGTAAAAGTCTGGAGACAGACCGCGTATGGGGTATGCGCCAAGGCGCG CGCGACTACATCACCAAACCGGTTGATGCAGCCGAGTTGTTGGTCAAGAT CAAGGCACTGGGCTGA >Rfer_0478 histidine kinase ATGACAACTGAAGATATCAGCTTCACTGATTTCATCGCCTCATCGATTCA CGACATGAAGAATTCGCTGAATGTTCAGGTCAATGGCCTGGAAACCATCG CCGATGCCTGTCGGGCGCGCTTTGATGACGACACCCTGGCGGCACTGGGG CCCATCATCCATCAGGCGCACCGCATGAACGCCAACCTGATCCAGCTGCT CAGCCTCTACAAGCTCGGCAAATCGATTTACCCGGTGGACATTGCCGAAC AGTCAGTCGCCGATGTGATCGCAGAAACCCTGCTGCACAACCGCTCGGTG ATGGAGTTCAAGGGCATCACGATGGACGTGGATTGCGACGAGGGCTGCTA CTGGTATTTTGACCGCGACCTGGTGACCGGCATCTTGCTCAACGCCCTGA ACAACGCCTACAGCTACACCACCGACAAGATTCGCATCGCCGCCCGCATT GAAGGCGGATTCCTTGAGCTGCGGGTCGAAGACAACGGCCGGGGTTACCC CGACACCATGCTGCAAAGCGACGGTATGGCCGCCAACAAGGGGGTCAATT TTTCAAGCGGCAGCACCGGCCTGGGGTTTTATTTTTCTTCCCGCGTGGCC CAGATGCACAAAAACGGCGCTCGACAGGGTTCGCTCACGATAGAGAACGG CGGCGCCTATGGCGGCGGTTGTTTTGTCGTGCGCCTGCCCTAG >Rfer_2637 diguanylate cyclase with PAS/PAC sensor GTGACACCCGAATCCAATGACGCTGTCGGCTCAACCGTGGGCGGCAAATC CGACTTCAGACTGTTGCGTTATTTCGCCACTGCCAGCCTGGTCGCCTTTG TGGTGGTTGCGGTCTTGCTGGGCTACGTCTTTCGCACGCTGTCGGTGGAT GCCCTGATTGACGGCTACCAGAGTGAACACATCAACCACGCCAGGGTCAT TGCCAATGAGATGTGGGAGGAGCACTTTGGCCCCTTGGTCTTGTCGATGG CCGACAAGCCCGCCGCGCAGTTGCCGACGGCGCCACAGATTCCCGTGCTG CACCAAATGGTTCTCAAGCTTCTCAATGGCACCCAGATTTACAAAGTCAA GGTTTATGACTTGCGGGGCAGGACGGTTTATTCAACCGAACTCAATCAGA TTGGCGAGGACAAGAGCGATAACGCGGGTGTGATGAACGGCTTGCGCGGT TTGAACAGTTCCGAACTCGTGCATCAAAATCAGATCAGCTCATTTGAGGG CGAACTGCAAGACCGTGACGTCATCGAGAGCTACATTCCGCGCTACGACC CCGTGACGGGTCAAGTCAGCGGCGTGTTCGAAATCTACCGCGATGCCACC TCGGTCCTGGCGGAGGTCGGTCAGCGGCAGTGGATCCTGGTCGCCGCTGT GATCACGCTGCTGACGCTGCTTTACCTGGTGGTGTTCATCATTGTGAAAA GAGCTCAGGATCAAATCATTGAGCAAAATCAGGAACGCAAAAGAGCCCAG CACGCGCTGGCTTTGAGTGAGGAACGCTGGAAGTTTGCGCTTGAAGGCGC TGGCGACGGCGTATGGGACCGCAACTTGCAGACCGGTGAAGTTGTGTTCT CCAAGCGCTACAAGGAAATTTATGGCTTTGCCGCCGATGAGTTGGAGAAT CACACCGAGGCTTGGGACGCGCGCGTCCACCCTGATGATCTGGCCCGGAT AGAAGCCGACCGGGCGGCTTATTTTGCGGGGGAAAAATCCAGCTACGCCA ATGAGCGACGGATGCAATGCAAGGACGGCAGCTGGAAATGGATACTCTCG CGCGGCATGGTGGTGGCACGCGATGCGCAGGGCCAGCCCTTGCGCATGAT TGGCACGCACACGGACATCACTGCGCGTCATGAGCGTGAGGAAGCCTTGC GCCTGGCCTCTACCGTCATCCTGACCATGGATGAGGCCGTGACCGTGACC AATATGCGCAATGAAATCATCTCGGTCAATCCGGCGTTCACCGTGATTAC GGGCTACTTCGCCAGTGAAGTCATTGGCAGAAACCCCAAACTCATGGCGT CCGGCACTCATTCCGCGACGTTCTACCAGGACATGTGGGCAAAGCTCGCC ACCACCGGCAACTGGCATGGCGAAATCTGCAATCGCCGCAAAAGCGGAAA ACTCTATGTGGAATGGCTTTCCATCAAGCAAGTGCGCGATGAGCAGGGCG TGCCCTCCCACTATGTGGCGGTGTTCTCTGACATTTCCGAACGCAAGGCG AGCGAGGTGCGCATGCAGCACCTGGCGCATTTCGACGTCCTCACCAATTT GCCCAATCGCGCCCTGTTCTCCGACCGCTTGCGCCAGGCTATCGCCAAGG CCAGGCGCGACAAAACGCAGCTGGCCTTGATGTTCATGGATCTTGACAGA TTCAAACCGGTCAATGACCAGCTCGGTCATCAGGTGGGCGACTTGCTGCT CCAAGAAGTGGCACGGCGTTTGCTGGACTGCGTGCGGCGCGAATCCGACA CCGTGGCGCGGATCGGTGGTGACGAATTTGTCGTGATGTTGCCAGATCTC GAAACGGTGCAGGCGGCCACGCTGGTCGCTGAAAAAATTCTTGCCGCATT GAACCTGGTCTTTGAAATCGGCGAGCATCGGATCCATATTTCATCGAGCA TCGGCATTGCCATTTTTCCCGAGCATGGTCAAGACGAAAATCATTTGCTT AAAAGCGCCGATGCAGCCATGTACCTGGCTAAAGAAAATGGCCGCAACCG GGTCCAGGTGGCGGCAGCTGCGTCGAGCCCGGTCTAG >Rfer_3587 response regulator receiver domain protein ATGGCAAACATTCTGGTGGTTGACGACGAGCTCGGCATCCGCGACCTGTT ATGGGAAATTCTGAACGACGAGGGGCATAGCGTCGAAGTGGCTGAAAACG CGGCGCAAGCCCGTGCTGCCCGTTTGCGTGAGCGGCCCGATCTGGTGCTG CTCGATATCTGGATGCCCGACACCGATGGGGTGACGCTGCTCAAGGAGTG GTCAGCCACCGGTGTTTTGACCATGCCTGTCATCATGATGAGCGGACACG CCACCATTGACACGGCCGTGGAGGCTACCAAGATCGGTGCGCTGGCATTT CTGGAAAAACCGATTACCCTGCAGAAGCTGCTCAAGGCGGTCGAACAGGG ATTGGCGCGTGGTGCGATTCGCAAGTTGGTGGCGCCTCTCATGGCATTGC CTGACTTGCCGCTGGCAGATGTAGGTGCCACGGCCGCGCCATCGGGCCTT GTCGCGGCAGATGTGTTGCCGCCGTCGCAGCAAACCTTCATGCTCGACAA GCCTTTGCGTGAGTCGCGCGACGAATTTGAAAAAGCGTACTTTGAATACC ACCTGGGCAAAGAAAACGGCTCCATGACTCGGGTGGCAGAAAAGACCGGC CTTGAAAGAACCCACCTTTATCGCAAGCTGAAACAATTAGGCGTTGATTT GACGCGTGGAAAACGCAACGGCGCCTGA >Rfer_3547 diguanylate cyclase ATGCTTGACGCCGCCGATATTCTTGCTGCCAGCATCCTGATCGTGGACGA TCAGGAGGTCAATGTGCGGCTGCTGGAGCAAATACTGCGTGAAGCCGGCT ATCGGCGCCTGACGTCAACCATGGATCCATATGCCGTGTGCGACCTGCAT CGCACCAACCGTTACGACCTGATATTGCTCGATCTCGAGATGCCCGGCCG GGATGGTTTTCAGGTGATGGAGGCGCTGAAGGAAGATGAAGCCGATGCCG ACGGCTACTTTCCGATACTGGTGATCACGGCCCATCCGGACCATAAGCTG AGGGCATTGGCCTCCGGGGCGAAAGACTTCATCAGCAAACCATTTGACCT GATGGAAGTCAGGACGCGCATTCACAATATGCTGGAAGTGCGCCTGTTGT ACAAACAACTCGAACACCAGAACCGAGCGCTGGAATCCCTGGCACTGCAT GACCCCTTGACCGGGCTGCCCAATAGACGACTCCTGATGGACAGAATGGC CTTGGGCATTGCCCATGCGCGCAGGAACAGGGGCAATATGGCGGTCGTGT ATCTGGATCTCGACGGGTTCAAGGAGATCAACGACACCCTGGGCCACGAT GGGGGCGACGCCCTGCTCAAAATGGTGGCTACCCGTCTGGTGGGCGCCGT GCGTCAAGAGGACACGGTGGCGCGGGTGGGTGGCGATGAATTTGTGATTG CGTTGGCGGAACTGAGTCATGGTGACGATATGGAAAAGCTGGTGTCCAAG GTGCTGCAAGCCGTGTCAAAGCCCTGCAGCATTCAAGGCAGCAGCGTGAA TGTGACGGCCAGCGTCGGTGTCAGTGTTTACCCGGTGCATGGTGATAACG TCGAGACGCTGATGAAGAGCGCGGATCTGGCCTTGTATGAGGCCAAAGGC GCAGGAAAGAACGACTATCGCATCTCAGGGCTCGCCGAGCTGTGA >Rfer_2016 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGATGAATGCAGCCCGCCAGCACCGCACGCGCCAATGGATTTTGGCGAC GAGCGTCTTTGTTTTCAGCGCGGTGGCCATCGCTGTTTTAATCTGGCGCT GGGAACAGCAGACACTTATAGAAGTCCGCGCGCGAGCAGCTGATCTGACC GCAGATCACGCACACACCCTGCAACGCGATATCGAGCGGGCCTTGTCTGC AACCTATGCAATTGCCGCGCTGGTTCGCCAGGGCCAGGGAAACATCGCTG ATTTCGAAGCGGTCGCCACTGAAATGCTGCCGTTTTATCCGGGCGTTGCC GCATTGGGAATGGCTCCCGACGGCATTATTCGAAACGTGGTGCCTCTTGC TGGCAATGAAAAAAGTATTGGCTTTAACCAGTTGAAGGACAACACCCAGA ACCAAGAGGCGCTCATGGCCCGTGACACCGGCAGGCTGACACTGGCGGGA CCCCTCAAGCTTGCGCAAGGTGGCCTGGGAGTTGTGGGGCGTCTGCCCGT CTTTCTGAACGATGCGCAGGGACACAAGGTGTTTTGGGGCTTCACTTACG TAACCTTGCGGTTTCCGGATGCTCTGGCCTCTGCCCGCCTGCCTCTTTTG ACGCAACGCGGTTATGCCTACGAGCTTTGGCGCACCGCACCGGACACCGG CGAGCGACAAAGCATTGAGGCGTCTGGAAACGGTGTGCTCGATGCACCGG TAGAGCGCACGCTGGAACTGCCCAACGGCCAGTGGACACTGAGTGTCGCG CCGATCAACGGCTGGGGCCAATCAGACCGTCTCGGGTTCGAGGCCACCAT CAACTTTTTTCTCAGCCTGTTGATGGCCTATCTCGCCTGGTTACTGTATG AGATGAGGGTGCGTGACCAGGGATTGGAAGTGCAGGTGAACGAGCGCACG GCTGAAATTCTGGCGACGCAGCGACAGCTTCAAGCCACGCTGGGCGCGAT TCCGGACCCGCTGCTTGAGTTGGGACTGGACGGGCGCTGTTACAACGCAC ACTCGTCCCGGACTGACTCACTGCCATGGCCGACCGAGGACCTGATCGGC AGAACGATCATGGAATTGCTGCCGCCGCAGGCCTGCCAGATCGTGCTGGC GGCCTTGCAGGAAGCCAAAGAAAAAGAATGTTCAATCGGCAAACAAATCA AAGTGCCGCTTGACAATGGCATGCACTGGTTTGAAATGTCGGTGACGCGA AAATCAGCGTTGCCTGGCGAAGAACCCCTCTTTTTGGTTTTATGCCGCGA CATCACCGAAAGCAAGCAGGCAGAGAGAAAAATCCAGTTGCTGGCACATT TTGATTCACTCACAGGCCTGCCCAATCGGGTGTTGTTGACCGACCGCTGC AACCTGGCACTTAGCGCCGCGCAGCGCAATGGCACACCGCTGGCGCTGTT GCTCCTGGACCTGGATCATTTCAAGAACGTCAACGACTCGCTCGGACACC GGGTAGGCGACGAAGTGCTGATTGCGCTAGCGGGTCGGCTCAAAGGCGCC GTGCGTGAGCAGGACACAGTTTGCCGTCTGGGTGGTGATGAGTTCATTTT GGTACTTCCCGAAACAAATGCTGCGGGTGCTGCACATATCGCCGAAATGT TGCTGCAATCGGCATTGGTGGCATTTGAGCTCGAACCGCATGAGTTGACG GTGACACCCAGCATCGGGATTGCCTTGTTTCCTGGCGATGGCTCGGACTT CGACACGCTGTCACGTTGCGCCGATGCCGCGATGTACCGCGCTAAAAAAG ACGGGCGCAACAACTACCGCTTCTTCACGGCAGAAATGCAGGCTCGCTCT GAACGCACCCTGACGCTGGAAAATGCGCTGCGCCGTGCTTTGGAGCGCAA TCAGCTGCAGTTGCACTACCAGCCGCAAATTTCGCTGGCGAGTGGCCGTG TCGTTGGCGCAGAAGCCTTGCTGCGATGGAGTCACCCCGAACTGGGGGCT GTGCCGCCGGCTGAATTCATTCCCGTGGCCGAGACCTGCGGACTGATTTT GCCCATCGGCGAATGGGTCCTGCGTACCTCCGTGCAGCAGCTCAAGGCAT GGATTGACGCCGGGATGCTGCCCATTGCTCTCTCTGTCAATCTGTCATCG GTGCAGTTCCGCCATGCCGACCTACCTGAACTGGTAACCAGCATTCTGAA TGAAGCCCAGTTGCCCGCCCATTTGCTGGAACTCGAACTGACCGAAAACG TTGCCATGACCGACCCGCTGGGGGCCATTGCCGTCATGAACAATTTGCAC GAGCGCGGCGTACGCATGTCGATTGATGACTTTGGCACGGGTTACTCGTC GCTGAGCTACCTGAAAAAGTTTCGGGTCTACAAAATCAAGATCGATCAGT CTTTTGTGCGTGACATCACCGAAGACTCCGACGACAAGGCGATTGTGGGC GCCATCATCAGCATGGCGACAAGCCTGGGCATGCAAACCATTGCCGAAGG GGTAGAAACCGAGGGGCAGCTTGAATTTTTGAAGGCCAAGGGCTGCACCG AAGTGCAAGGCTACTATTTCAGCCGACCGCTGCCGGTTGAACAGTTTGAG GCGTTCATGGGGACAAAATCATCTTCAAACCAGCCGTTTGTTCCCGCTCA GTCCGCAATTGACATAAGGCTCTGA >Rfer_1627 serine/threonine protein kinase ATGTCAAAGGTCAGACCCGCACCCTTAGCGCCCAATACCCTGATCGGTGG TTACCGCGTTGTCCGCAAAGTTGCGGCGGGCGGTTTTGGCGTGGTCTATC TGGCCGAAGATAGCGAGGGTCAGCAAGTCGCGATCAAGGAGTACCTGCCG TCGGCGCTGGCGACCCGCGTGGCGGGCGAATTGCTGCCGCAGGTGCAGCC GGAAAGGTTGTCCTTGTACCGCCTTGGCCTCAAGAGTTTCTTTGAAGAAG GCCGCTCGCTGGCGCAGATATCACATCCCTCCGTGGTGAGCGTGCTGAAT TTTTTCAGGGAGAACGAAACCGTTTACATGGTGATGAATTACCTGGAGGG CGCGTCGCTGCAGGATTTCATCGTCACGGCGCGAGACCTCAAGCAGGCCA AAGTGTTCCGGGAGTCGACCATTCGGTCCCTGTTTGACGAAATTCTGCGT GGTTTGCGCATTGTTCATCAGCACAAGATGCTGCACCTGGACATCAAGCC GGCCAATGTGTTTATCACGGATGACAATAAGTCCGTGCTGATTGATTTTG GTGCGGCGCGTGAAGTGTTGAGCAAAGAGGGTAATTTCGTCCGCCCCATG TACACCCCCGGCTTTGCCGCCCCTGAGATGTACCGGCGCGATGCCGCCAT GGGGCCTTGGACCGACATTTACGCCATTGGTGCCTGTATTTATGCCTGCA TGCTGGGTTACCCACCCAATGAGGCGCCGCAACGTCTTGAAAAAGACCGC ATTGCCATGGCGCTCACGCGTATGCGCGGTGTTTACTCTGACAACCTGAT TGAGATCGTGGAGTGGTGCATGTCGCTCGATCCGCTGTCGCGGCCGCAGT CGGTGTTTGCTCTGCAGAAAGAGCTGAGCCGCGCGGGTGAGCGTCGCTAT ACCAGGCTCAGTGTGACTGAAAAAGTTCGACTTCAATTCGACACCATGGT GTCAGACACGAAAAAGAGCGTCCAGAAAGCGACCCGTTTTGGCGCGAAAA TCAAATGA >Rfer_2742 periplasmic sensor signal transduction histidine kinase ATGCGTTCAATAAGTCTCAGGGTCAAAATCAGCCTGTATCTGTTCATCGT TCTTTCAGCGGTGGCGGTCCTGTTCACACTGGTTTTCGTTGAACACCGGG AGGAAGAACTGCAGAGTGAGATTTCCCGGCATGTCACACAAATTTCCGAC GTGATTATCGCGAGTACCCGTAGTTCGATGTTGGTGAACGAGCGTGACAT TGCTGGCAAGATCATTGAGGACATTGGCAAGCAAAAAGGCATTGAACGTG TCCGGGTGATCGATAAAGATGGCACGATCATTCATTCAAACCGGACATCA GAGGTTGGCTATTCGGTCGAACAACAGGACGAACCTTGTGTTCAATGCCA TAAGACCAGTACACCACTGGAGCAAGTCTCAGACGACAAGCGGTGGAAAG TCATTGAGATGCCGGGGGGGCACCGAGTTCTCGGTACCATGCAAGCAATA CGCAACGAGCCTTCGTGTTCATCTGCGTCCTGCCACGAACATTCTGCCAG TCAGTCGGTGCTTGGCATAGTGGATGTTGCCTATTCTCTCGATGAGATCG ACCAGTCGAGAAAGACGCATACCATTCACATGATTGGCATGGCAGCTGGG TTCATTCTTATTTTCGCTGTCAGCATCGGCGTTTTGCTGCAGCGCTTTAT CTATGTGCCTTTGAAAGACATGGATTCCGGCGCCAAGCAGATCGCCGCTG GCCGCCTTGATCAGAATATTCCGGTGCGCAGCGATGACGAATTCGGCCGC GTCGCGGCATCTTTTAATCATATGACTGAAGCACTGAAAGCATCAAGGTC AGAGATGCAGGACATGTTGCATACCCTGGAATCCAAAGTCACAGAACGAA CCCGGGAACTGCTGGCTGCCAAGGCCGAGGTTGCGCAGGGGGAAAAGCTG GCCTCTATCGGTGTGCTGGCGTCTGGCATTGCTCATGAATTGAATAATCC GCTCACCGGCGTGCTGACCTTTACCTCCCTGATGCGCAAAAAAGCGGCCG ATGGCAGTGAGGATGCTGCGGACTTGGACCTGGTGATCCGCGAGACCAAA CGGTGTGCCAGCATCATCAGGCGGCTTCTCGATTTCGCAAGGGAAAAAGT GCCGGTGAAGGGGTTTTTCAACCTGAATCTGGTGATTGAAGACACCGTGC GTTTTGTTGAACGGCCAGCATCCTTGCAGCAGATCGAGATCACAACTGCT CTTGATCCTGCGTTACCCCAGGTATGGGGTGACGCCGATCTGATCAAGCA GGTTATCTTGAATTTGCTTGTCAATGCCCAGCAAGCCATCGAGGGCAAGG GCAACATTAAGGTCGCAAGTCGCCTCTATCCCGGCATGGCCTCTGACAAA CCTGGCGTTGATACCCTTCCGATGGTTGAAATAAGCGTGACGGACACCGG TTGCGGTATTCCGCCAGCCAACCTGGAGCGTATTTTCGATCCATTTTTTA CCTCGAAAGAGGTGGGCAAGGGAACGGGGCTGGGCTTGTCCGTCAGTTAT GGCATTGTCAAAGCCCATGGAGGCAAGATCAATGTCGAGAGCGTGGTTGG AGAAGGAACTACTTTTTACGTCCTTCTGCCTATAACGTCTCCTTTTGATG AAACCGAATCCCAGGCCGCGGAGATTACCCCATGA >Rfer_3329 metal dependent phosphohydrolase ATGCACCTGCAGGAGTTTTGCGGCTCCTGGATGGAGCATCCATTTTTTCG CACCAGTTTTGTCCTCAAAGACCCGAAAGATATCGAGTCAATTGTGGGCA GCAGCATCAAGGAGGTCTGGATTGACTGCGACAAAGGCCTGGACGTGGCG AGTGGTGAAGCGGCGGTGTCCGAGGCCGAGTCTGAAGCCCAGGTGGAACA TGAGCTAAAACAAATAGCCAACGGACGGCGTCAGCTGGCACCGGTCTCGG CCGCGCAAGAGCTTGAACGCGCCGCCAAAATTTGTGGCCGTGCCAAACAA GCTGTGGTTTCCATGTTTGAAGAAGTCCGCATGGGCAACGCCGTGGACGT GGGCGGCGCCAAACTGCTGGTGGAAGAAATAGCCGACTCGGTGTCGCGCA ACCCCGGTGCGCTCATCAGCCTGGCCCGGCTCAAGACGGCGGACGACTAC ACCTACATGCATTCGGTGGCGGTGTGCGCCATGATGGTGGCACTGGCCAA ACAATTGGGACTGGATCAAGCCCAGACCCGCTCCGCCGGCCTGGCCGGGC TGTTGCATGACCTGGGCAAGGCGGTGATGCCGATGGACGTGCTCAACAAG CCGGGCAAGCTGACCGATGCGGAGTTCACCATCATCAAGAGCCACCCGGT GCAAGGGCACAAGATGCTGCTGGGCGGCGTCAATGTGGACCCGATCGCCA TTGAGGTCTGCTGGCATCATCATGAAAAAATGGACGGTTCCGGTTATCCA GACCGGCTCGAAGGCGATCAAATCAGCCTTTGGGCCCGGATGGGTGCGGT GTGCGACGTGTATGACGCCATCACCTCCAACCGGCCGTACAAGTCAGGTT GGGATCCGGCCGAGTCCCTGCGCAAAATGGCCGAGTGGACCAAAGGCCAT TTTGACCCCCAAGTGTTTCAGGCCTTTGTCAAGGGCATGGGAATCTACCC GGTCGGCTCGCTGGTGCGCTTGAGCTCCGGGCGCATTGGCGTGGTGACCG AACAGACCAGCAAGTCCTTGACGACACCCCGTGTCAAGGTGTTTTTCTCT ACCAAATCGAACATGCGCATCGTGCCGCAGCTGATCGACCTGTCCAGTCC CGATACCAGTGAAAAAATAGCCGCGCGTGAAGATCCGGCCAAATGGCATT TTCCTGACCTCAATGAACTGTGGTCAGGCTTGCCAAGCGCGCCCTGGTGA >Rfer_3646 two component transcriptional regulator, winged helix family ATGGAAAAACGTGATTGCATTCTGATTGTTGATGACGAGCCGGAAATTCG CCGGCTGCTGGTTGACTACCTGATGCGCAACAACTTCGAGGCAGTGGCCG CTCGCGATGGCCGCGAGATGTGGCAGGCGCTGGACCGGCACGCGATTGAC CTGGTGGTGCTGGACCTGATGCTGCCCGACACCGATGGCTTGAGCCTGTG CCGCGAGCTGCGCGCCAAGTCCAACCTGCCGGTGCTGATGTTGACCGCCC TCGGCGAGGAAACCGACCGCATCGTGGGGATCGAAATGGGCGCTGACGAC TACCTGGTCAAGCCCTTCAGCCCGCGCGAACTGCTGGCCCGTATCAAAGC GGTCTTGCGCCGCACCCGCGCCTTGCCACCCAATATGCGGCCCGAGTCGG CGCGCTGTCTGTGCTTTGCCGGCTGGTGTCTGGATACGGCGGAACGCCTG CTGACCGCGCCCGACGGCGTCGCCACGCCCTTGTCGGGCGGTGAATACCG GCTGCTGCATATCTTGCTGGACCACCCGAACCGGGTGCTGAACCGCGACC AGTTGACCGAGATGATCCATGGCCGCGAAGCCGAGGCCTATGACCGCGCG ATTGACGTGCAGGTCAGTCGGCTGCGCCAGCGCCTGCGCGACGACAGCCG CGAGCCGACGCTGATCAAGACCGTGCGCGGCGAGGGTTATGTGCTGGCCG CCAGCGTGCAGAGGCAGGCTTCATGCGCTTGA >Rfer_3120 two component transcriptional regulator, winged helix family ATGATCTGCCATGATTTCTGGACCACATCACAACAGCTGCTTGCCATGCG AATCCTGGTAGTCGAAGACAACACCGAATTGGCGCAATGGCTGGGGCGCA CCCTGCGCAAAGAACAATACACCGTGGACTGCATCGACAACGGCGCGGAT GCTGACTTCGCCCTGAAGTCTGAAAAGTACAACCTGATCATCCTCGATCT CGCCCTACCCAAGCTGGACGGAAAAGAAGTGTTGCGACGCCTGCGGGCGC GCGATGACCAGACGCCGGTGCTGATCCTGACCGCCAACAACACGATCCAG AGCCGGGTGAGCAAACTCGACCAGGGCGCAGACGACTACATGGCCAAACC CTTTGAGATCGAAGAACTCGAAGCGCGTATCCGCATGCTCTTGCGGCGAT CGTCAGGCCAGGCCAGCCCCCTCATTGCCTGCGGCGATCTGAGCTACAAC ACGAACACGCGTGAGTTCCATATTTCACAGCAGCTGCTGGCGTTAACACC CCGGGAGCGCGCGGTGCTGGAGATGCTGCTACGCAAGTCGGGCACCACCG TCACAAAACATGCGCTGGCACAAAGCCTGTTTTCCTTGAGCGAGGATGCG TCCACCGACGCCATCGAGATCTACGTACACCGCTTGCGCAAGAAACTGGA GCACAGCTCCGCGCAAATCATGACATTGCGCGGATTGGGCTACCTGCTGC GCCCGGCCGGGAATGAATAG >Rfer_3764 diguanylate cyclase/phosphodiesterase ATGTCCCTCATCAAACAACTCTGGATTGCCATCGCCTTGGTCATGACGCT TGCCTTTGGCGGCAGCATGGTCGTCAGCGTTTTGTCGGCTCGCCATTACC TGGAGCAGCAGTTGCAGGTCAAAAACATCGACAACGCCAATGCGCTGGCC TTGTCGTTGTCGCAACTGCCTAAGGATCCGGTGATGATCGAGTTGCAGGT GGCCGCACAGTTTGATGCCGGGCATTACAGCGTCATCCGCATCACCTCCC CGACGGGCAAAACCCTGGTGGAGCGCGTGTTTTCGGGGGCGCTCACGGGC GTGCCACACTGGTTCATCGCCCTGACTCCCATCAACGCCGCACCCGGTCA AGCCCTGGTTCAGGATGGCTGGAACCAATACGGCACGCTGACACTTGAAA GCCAGGAGCAATACGCCTACCAAAGCCTGTGGGACGGCACCCTGAAGTTG CTGCTGTGGTTTGTGCTGGGCGGGCTGGTCACAGGGGCGGTCGGCACCCT GCTCATCCGCATCATCACCCGGCCGCTGGGCGAGGTGGTGGCCCAGGCCC AGGCCATTGCCGAGCGCCGTTTCCTGAGCATTGCCGAACCGCGCACGCCC GAGTTGAGCAGCGTGGTGCGGGCCATGAACAGCATGGTGGAGCGGCTCAA GGCCATGTTCAGCGAAGAGGCGGCTCGCCTCGAAACCTTGCGTCAAAAAG TTAACCTCGACGCGCTGTCTGGCTTGTCGGGTCGCGATCATTTTTTATCC CAAATGCGCGAGTTGGTGACCGGCGAATCCTTCGGTGCCGAAGGCTCGCT GGTCATGGTGCGCCTGACCAGCTTGAACACGCTCAACGCCCGGCTGGGTC ACCAGCGGGCCGACGCCCTGCTCAAGCAGTTGGGCCGCGTACTCCAGGAC AGTTGCCAGGATAGGCTCGGCCAACAGGCTGGACGCCTCAAGGGCGGCGA GTTTGCCGTGGTTTACCCCACCACCGCCTCACCCGGGGAGGCCGGCGCCG ATTTGCACCAGCGCCTGACCCAAAACTGGTTGCCCGACTGGGTGGCCGAC GTGCCCGACCTGTTCCAGGTCGGCGCCGTGCCCTACCACCGCGATCAAGA CGTTGGCGATCTGCTCAGCCGTGCCGACGAAGCACTCGCCCGCGCCGAAG CCCAGGGTTCGAACAGCTGCTACGCCGGCGAGGCCGACAGTGGCAGCACG GCACGGCCCGCCGAGCAATGGCGCAACCTGTTGACCGACGCCGTCGCCGG CGGCAAGCTGCGGCTGGCTTTCTACCGTGTGGTCGGCAGCGCCAACCAGG CCGCCATCCACCAGGAGGGCGTGATTCGCCTGCAGCTCGACACGGCCGGC GCATTGTTACCCGCAGGTGACTTCATGCCCATGGCCGCGCACCTCAATCT CACGGCGCCCATTGACCTGCAAGTTGTCAAGCTCGCCATTGAATACCTGC GCACCACGCCGGGCGACATCGCGATCAACCTGTCGGCCGAAACCATTGTC GACTTCAATTTTCGCCGCGAACTGGCACTGCTGTTACAGGCCAACCCCGA CATGTGCAAACGCCTGCTGTTTGAGGTGCCCGAGTACGGCGTGTTCAAAC AGTTCGATGCCTTTCGCGACCTGGTGCACGCCGTCAAACCGCTGGGCTGC CGCGTCGGCATCGAGTACTTCGGCCAGCGCTTTGCCGAAGGCGACAAGCT GGCCGACCTGGGCCTGGACTACATCAAGGTCCACCCCAGCTACGTGCATG GCATCGCCAACAACCCGGGCAACCAGGAGTTTCTTAAAGGCCTGTGCAGC GTGGCGCGCAACTTTGGCATCGTCGTCATCGCGCTCGGCGTCGAATCCGA GGCCGACCTGCCCCTGCTGGCCTCGCTCGGCTTTGACGGCATGACGGGGC CGGGGGTCAAATGA >Rfer_1305 diguanylate cyclase ATGATCGATCTGCATGATTTGCGTCTGGATGATGCACGCGCGTTGCTGGC GCATGATGCGTATGGCAGTTTGCCCGAAGCGGATGAATCCCGCACCCAGT ACCTGCAGAGAGTTATCGACCAGCTGTGCGAACTCTCCCTCAAAGACCCG CTGACGGGTTTGGCCAACCGACGTCATTTCCGCCATGTACTGGGGCGCGA AATTGATGCAGTGGCCCGTTCAGGTGAGTCTGCGTTGCTGTTGATGATGG ATATTGATCATTTCAAGAAGGTCAACGACACCTACGGCCATTTGGCGGGA GACCGGGTGCTGCAGGCCGTTGCCAAAGCCCTGGCGTCCTGTTTGCGCCC GATGGACACCGTGGCGCGCTACGGCGGCGAGGAATTCACTGCAATCCTGC CCAACTGTCCACCCTCGTTTGGGAAAATCGTGGCGGAACGAATCCGCGCA ACCGTCGGTTCGCTCCAGGTCTTAGTGGCGCCGCTGGTCAGTCTGCAGGT GACGATCAGTATTGGGGGCGCCTTTGCGCCCGAATGGGTTCGTTCCACCA CTGCGTTATGGATCGACCGGGCCGACACCCAACTCTATCGGGCCAAGTCC GAGGGGCGTAATCGCGTTTACATTGATCAGCAGCCGGAGATCGCCGTGAG TGCAGAAGAAAGAAAAATGTTGTTTGGCCACCTCTCAATAGGGGACCCGG CCTGGCTGGAGAGTGTTTCGACTGACGCGGCGGTTGGTGCAGCAGACGGC GCCATGAAGAGGGTGAACTGA >Rfer_2943 BolA-like protein ATGACTGCAGACGAGATCAAGAACATCATTGCCGCCAACCTGCTCTGCGA GCACATCGAACTCACGGGCGACGGCCAGCATTGGTACACCACCATCGTGT CGCCCGAATTTGAAGGCCTGCGCGCCATCAAACGCCACCAGCGGGTCTAC GCCACCTTGGGTGAAAAAATACACAGCAACGAGGTGCACGCTTTGTCGAT CAAGGCGTTCACGCCAGCCGAATGGGCGGCATCACCTCAATGA >Rfer_3778 response regulator receiver domain protein ATGAGTCAAAAAATATTGGTAGCCGATGATGAACCCAACATCGTGATTTC ACTGGAGTACCTGCTGAAACGCGAGGGCTACACGGTGCTGATCGCACGCG ATGGCCAGGAAGCGCTGGAGGCCATTGCACGCGAAAAGCCCGACCTGGTG CTGCTGGACGTGATGATGCCTAAAAAGACCGGTTTTGAGGTTTGCCAGGC GCTGCGCGCCAGCGACGACCTGCAAGCGATAAAGATACTGATGCTCACCG CCAAGGGGCGCGATACCGATGTTGCCAAGGGGCTGGCGCTGGGTGCTGAC GCCTATATCACCAAGCCTTTTTCAACCCGGGAACTGGTGCTGAAGGTCGC CGAGCTGCTGCGTGAGTCGCCATGA >Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGGCGACGAATTTTTTACCGAGTCATTCAGGATGGCGCCCTCCCGTCGA ACGGCGCGGTACCTGCCGCTTGTTACTTGCGGTCTGGGTGGTTCTTGCCG GGATTTTGGGCCTTTGCCTGCCTGGCCCGGTCCAGGCGGCCACCTCGCTC AATGACTGGCGCACACAAGCGGGCCAGACCCGGGTACTGGCGGAAAATGA CGTGCCTCGCGCCTACACGCAGGCGCAGCGCTTGCAGGCCAGCCTGCCCG CCGATGCCACACCCGTTGACCGGGCCCGGGTGCTCAATCTGCTGGCCCGT ATCGAGGTTTATCTGTCGTTGACCGAAAAGGCGCAAAAGAACGCTGAAAC CGCCCTGGAACTGGCGCAACGGCAGGGGGACCGGGTGGGGCAGGCCGAGG CACAGCTCAACGTGGCGTTGAACGCCGTCAACCAGGCCCGGATTGACGCG TCCATTACTGCCACCACCCGCAGCGTGGAACTGCTCGAAGACGTGAACCG GCCTGACTTGCTCGGCGAAGCGCTGCTGAGGATGTCCATGATGTACCGCC GCGTCAATGACTTTGACAATTCCGTCACCATGGCCATGCAGGCCATGGAA ATTGCCAAACGCACGAAAGACCCCCTTGCGCTGACCTACGCCCATCAGGG CCTGGCCATTTCATTCGATCTCAGCGGGCGCTACGCGCAGGCTGGCGAGC ACTACCTGCAGATGCGCGACTACGCTCGCATTGCCCACTCGAAAATTCTG GAAGCACACGCCGTTCACGGTCTTGGCGGGGTGACGGCGAGCCTTGGCCG TGTTGCTGAAGGCGAACGTTTGACGCGCGAGGCGATTGCCATGTTCCGCT CAGTCGGTAGCCCCTTCAGTCTGAGCTACGGGCTGTTTGGCTTTGCGGAC TTGCTTCGCAAGCAGGGCCGCTACGGCGAAGCCGTGCTGCTGCTGGAGGA AGTGGTCGCGATCTATGAAAAATATCCGAACCCCATCGGTCTCTGGTTTA CGCTGAATGCGCGCAGCACCAGTCTTCAGGCCTTAAGCCGCAACGCGGCC GCACGGGCCGATGCCGAGAGGGCTTATGGGCTCGCCAAAGAAATTGGTTT GCCCGTTTACCTGAGCGGCAGTGCGCGGCGCATGGCCGAGATTGGCACCG TTGACGGTGACCACCAGCGAGCCTACCAGCTCTTTGTCGAAGCGGCCGAC CTGGCGGACAAGGTGGCGCGCGAAAAAGCCAGCGCACGCATGGTGGAACT TGCCGAACGCTACGCAACCGAGAACAAGCAGCGCGAAATCAACGAATTGA CCCGTCGCAACGAGCAACAATCCGCTGAGCTGCGCCAGCGCGCCCTGCAG GAGCGCTGGCTGTGGACCGTGCTCGGCGGCAGTGCCCTTGTCTTTGCCGG TAGCGCGTACTTCCTGCTTCGTCTGCGGCGCTCCAACCGGATGCTCGAAG CGCTCAATACACAAGTGCAGCGGTCCCAAAACCAGCTGCAAGCCACGTTT GATGCGATCCCGGACCCGCTGTTCGTGCTTGGACTCGATGGTCGTTACTA TGACTGCCGTTCTTCGCGCGCTGACCTATTGGCCGCACCGGCAGAAGATT TGATCGGCAAAACGGTGTCTGACGTCCTGCCTCCCGAAGCCGCCAGCATT TGTTTGTCGGCGTTGCGCGAGGCGAATGAAAAGGGCACATCAACGGGCAA GCAGTTTGAATTGCAGCTTGCGCATGGCAGGGCCTGGTTTGAACTGTCCG TTGCCCGCAAGTCGGTGGGCCAGAGGCAAGAGCCGCGTTTTATCGTCCTG TCCCGAGATATCACCGAGCGCAAGCAGGCCGAGGAGGCGCTTCGCATCGC CGCCACCGCCTTCGAGTCCCAGGAGGGCATGACCGTCACCGATGCACAGG GCGCCGTCCTGAGGATCAACCGGGCCTTCACCGAAATTACCGGCTACAGC GCCGATGAAGTCGTAGGCCATAACCCGCGCCTGCTCCAGTCGGGGCGCCA TGACAAAGCCTTCTATGCCGCGATGTGGGAAAGTATCAGGCGTACCGGAT CTTGGCAAGGCGAAATCTGGAACCGGCGCAAGAACGGCGAAGCCTATCCG GAGTTGCTCTCCATCACCGCTGTCAAGGAGAACGGTGGAATTGTCACCCA CTACGTCGGCACCTTCATGGACATCACCCGGCGCAAGGCAGCGGAGGACG AGATCCGCAATCTGGCGTTCTTTGACTTGCAGACCGGCCTGCCCAACCGG CGGCTCCTGCTCGACCGGCTGCAGCAGGCCTTGGCCGCGAGTGCCCGTCA CCGGCGCCAAGGGGCGCTGCTGCTGATCGACCTTGACAATTTCAAGACCC TCAACGACACCCTTGGCCATGACAAGGGCGATCTGCTGCTGCAGCAAGTC GCCCAACGGCTGGCAAGCTGTGTGCACGAGGGTGGCACGGTGGCCCGGTT GGGTGGCGATGAATTCGTGGTGATGCTCGAGAATCTGAGTGAGCACCTGG AGGCGGCCGCCACCCAGGCTGAAACCCTGGCCAAAAGAATTCTGGCCTCG CTCAAGCAGACCTACTCTCTGGACGGCTATGAGTATCAAAGCACGGCCAG CATCGGCATTACGCTGTTTTCCGAGCAGCAGGAGACCACTGAGGATCTAC TGAAGCGGGCCGATCTGGCCATGTACCAGGCCAAGGCGGTAGGTCGCAAC ACGCTGCGCTTTTTCGACCCGGAAATGCAGGCCGTGGTCACGTCGCGCGC TGCATTGGAAGCAGGTTTGCGCAGGGCTGTTACGAGTGATGAGTTTCTTC TCTACTATCAGGCTCAGGTGGACGGCCAGGGCCACCTGACAGGGTGCGAG GCGCTGTTGCGCTGGCAACATCCTGAACGTGGCCTGGTAGCGCCTGGCGA ATTCATTGCGCTGGCTGAGGACACCGGCTTGATCCTGCCGCTGGGTCGTT GGGTGCTGGACGCCGCATGCACCCAATTGGCCCAGTGGGCCACCCGGCCT GAGATGGCCCACCTGACGGTTGCGGTCAACGTCAGCGTCCGCCAGTTCCA TCAGGCGGATTTTGTGAACCAGGTGTTGACGGTTCTTGACAGCACTGGCA CTAACCCGCAACGGCTCAAGCTGGAACTGACCGAGAGTCTGCTGATCGGT GACGTGGAAGACGTCATCGCCAAGATGAGCATCCTGAAAGAAAAAGGCGT TGGCTTCTCCCTGGACGATTTCGGCACCGGCTATTCCTCGCTGTCCTATC TGAAACGCCTGCCGCTGGATCAGCTGAAGATCGACCAGGGTTTTGTCAGG AACATTCTCATCGACCCCAACGATGCCGCCATCGCCAGGATGGTCATCGC GCTGGGCGACAGCCTGGGCCTGGCGGTCATCGCGGAGGGGGTTGAAATCG AGGCGCAGAGGGATTTTCTGGCCCGTTTGGGCTGCCATGCCTGCCAGGGC TATCTGTTTTGCCGTCCGCTGCCGCTGGATCAGTTCGAGGCGTTTGTGAG GCGGGTCTGA >Rfer_4102 two component, sigma54 specific, transcriptional regulator, Fis family ATGAGCGGGCGCGCACCCCTGGCGGTGTTGGTGGTGGATGACGAACAGCG CTCGCTGGAGACGCTCAAACGCACGCTGGATGACCATTTCACCGTGTTCA CGGCCTCGTCGGCTGAACAAGGCAACGCCGTGATGGCGCAGGAGTTGGTG CAGATTGTGCTGTCGGACCAGCGCATGCCCGGCACCTCGGGTGTGGCATT TTTGCGCGGCGTGCGCGCCCAGTGGCCCAACACCGTGCGGCTCATCTTGT CGGGTTACACCGAAGCCGAAGACATCATCACCGGCATCAACGAGGCCGGC ATCTGGCAATATCTGCTCAAACCCTGGCACCCGGACCAATTGCTGCTGAC GCTGCAAAGTGCCGGCGAGCTGTGGCGCTTGCAGCAGGAAAACCAGCGCC TGACGCTGGAGCTGCGCGCCAGCCCCGAAAACCTGGCCCTGCGCGTCTTC AGCCTGCGCCAAAAAGCCAAAGCGCTAGCGGGCTTCGACAAGTTGATCCG CGCCGACAGCAGCCCGCTCAATGAAGTCTGTGCGCTGGCCGAGCGGGTGG CTGGCCACGACCTGTCGGTGCTGATCACCGGTGAATCGGGCACTGGCAAA GAGCTGCTGGCACGCGCCATCCACTACGCCAGCGCCCGCGCCGAACAGCC TTTTGTGGTGGAAAACTGCGGCGCCATGCCCGACACCTTGCTGGAGAGTG AGCTCTTTGGCCACAAGCGCGGCGCCTTTACCGGCGCCACCGACACCCAC ATCGGCCTGTTTCAGCAGGCCGATGGCGGCACGCTGTTTCTGGATGAAAT CGGCGAAACGTCGCCCGCCTTCCAGGTCAAGCTGCTGCGGGCGCTGCAAG AGGGAGAAATCCGCCCGGTCGGCAGCCCACGCTCGGTCGGCGTCGATGTG CGCCTGATCGCCGCCACCAACCGCGATCTGGAAGCCGATGTGGCGAGTGG GCGCTTTCGTGAAGACCTGTACTACCGCGTGGCCGGCATCACGCTGTACC TGCCGGCGCTGCGCGAACGTGCGCAGGACATCGAGCCGATCGTGACCGAT ATGCTCAAAAAGTCACCCCTGGTCGGGCGAAGAATGTCGCGTGAAGCCCT GAACCTGCTGACCCGCCACGCCTGGCCCGGCAACGTGCGTGAACTGCAAA ACGAGATTCGCCGGGCGCTGGCGCTGGGCGACGGCCCCGTGCTGGGCGCT GAACTGCTGTCACCGCGCGTGCGCCAGACCGCCGCCCTGCCCGATCCGGT GTCTGACGCCGTTGAAGAAGAATCAGGGCAGCTCAAACACCATCTGGATC GTATGGAGGCCCAACTGATCCGGGATGCCATGCTGCGTCACAAGGGCAAT AAAACCCACGCCGCTGACGAACTCGGTTTGACGCGGGTTGGGCTGCGGAT GAAGATGATGCGGCTCGGGCTCGGGTGA >Rfer_3685 two component transcriptional regulator, winged helix family ATGCGCCTGCTGTTGATCGAGGACGATGCGGTATTGCGACTGGGTCTGAA GCGCCAGCTCGAAGCCGATGGCTACCGCGTGGACCAGGCGGGCGACGGCG CTGATGGTTTGTTTCAGGCGCGCGAGTATCCGCTGGATCTGGCGATTGTC GATCTGGGCTTGCCCAAGGTAAACGGCCTGACGGTGGTGCAAACGCTACG CGCCGAAGGCCGCACCCTGCCCATTTTGATCCTGACTGCACGCGGCAGTT GGCAAGACAAGGTGCAGGGGCTGGAAGCCGGCGCCGATGACTATCTGGTC AAACCCTTTGAATACCCGGAGCTCGCCGCACGCGTCAAGGCGCTGCTGCG CCGCTCGCTCAAAGCGACGTCAGACGTGCTCACGCTGGGCGCGCTGCGCA TCGACTTTTCGGGTCAGAGCGCTCGCCTGCACGATGTGCCACTGCAACTG ACGACCTTTGAATACCGGGTGCTGGAATATCTGGTGCGCGAGCGCGCCCG GGTGGTGCCCAAGCAGGAGCTGTCGGACTACCTGTATCCGCACGATGAAG ACCGTGACAGCAATGTGCTGGAGGTTCTGATCGGGCGGCTGCGGCGCAAG CTTGATCCGGATGGCACGCTGCTCCCGATCGAGACCCTGCGCGGGCGCGG CTACCGCTTTGCGCTGCAGTGA >Rfer_4055 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGACCGGTTCCGAGGGTAACAGCGGCATACCTGCCACGGTGTCTGCGCG GCAGTCGCTCAAAACCAAAGTCACGCTGATTACGCTGCTGGTCTTTGTGC TGAGTCTGTGGTCGCTGTCGTATTACGCCAGCCGCATGTTGCGCCAGGAC ATGGAGCGTCTGCTGGGGGAGCAGCAGTTTGCCACCGTGTCGCAGGTGGC GGCGCAGCTGAATCAGGCCCTGCAGGCTCGGGTCAGTGCCCTGGAGACGG TGGCGCGCGCGATCAGTCCAGCGCTGCTGGACAAGCCGCAGGCGCTGCAG GTCTTTCTTGAGCAACAGATCATTTTAAAAACGCTGTTCAATGCTGGTGT GCATGTCCTCGGGCCCGACGGTGGGGTGCTTGGGCTGGTGCCTGAGGCCA GCCGCGTCGGCGCGGACTATTTCCAGAACCCGACCGTGCAGGCGGCGCTG TCGGAAGGAAAAACCAGCATCGGCGCGCCGACACACGAGGTCTTGCTGAA GCAGCCTGTGTTCCCGGTCATCACCCTCATCCGCGATGCTGGCGGCCGAG TGATCGGCGCCCTGGCAGGCGTGACCAACCTGGACCAGCCCAGTTTTCTG GACATGATTTCGCAAAGCCGCTACGGCAAGACCGGTGGCTATGTGCTGAT TGCAGCGCAGCAGCGCCGGGTGCTCGCCGCCACCGACAAAAGCCGGGTCA TGGAAGTCCTGCCTGCACCCGGCGGCAACCCAGCGATTGATCGCTTTCTT CAAGGTGAGGAGGGCTCGACCGTCATGCGCAATCCGCTCGGACTCGAGAT ACTGGCTTCCGACAAAAGCCTGCCGGCAGCGGGGTGGGTGCTGGCTGCGG TGCTGCCCACCGCCGAGGCCTTTGCCCCGGTGCGCGCCATGCAACAGCGC ATGCTGCTCGCCACCAGCCTGCTAACGCTGCTGGCGGGTCTGGTGGTCTG GTGGACGATTAAGCGCCAGCTGGCGCCACTGCTGGCGACCGCGCGCCGGC TGGCGGCCATGGCCGATGAAAAACAAGCGCTGCGAGCCTTGCCGGTGACC CACCCGGATGAAATCGGACAGGTTGTCAAAGGTTTCAATCGCCTGCTGGG CACCCTGGGTCAGCGCGAGGCCTTGTTGCAGCAAATCCTCGACACGTCGA GCGTGGCGATTTTTCTGGTGGATCGTCAAGGCCGCATCACGAAAGCCAAC CAGCGCATGGCCACGCTGTTTGGCTACCCGCTCCATGAATTGCAGGGCAT GGAATACGTGGCGCTGGTGCACCCCGCGCAACGCGAGACCGGGCGCAAGA ATATGCTGGCCCTGCTGGACAGCGCCCTGCAGTCAGTGGATCTGGAGCGA CTGTATTGGCGCGCCGACCAGACCGAATTCTGGGGCCACCTGACCGGCCA GCGTTTTGTGGATGGCAACGGTGAAGAACAAGGCCTGGTCGGTGTGATTG CCGACATTACCCAGCGCCGCCAGACAGAGGCCGAGCTGCGCATCGCCGCC ATTGCCTTCGAGTCAGAGCAGGGCATGGCCATTACCGACCCGCAGGGTGT GATGCTGCGCGTCAACCGGGCCTTCAGCGCGATTACCGGCTACAGCGCGC CGGAGGCGGTCGGTCAAAACCCGCGCCTGCTCAGCTCCGGACGCCACGAC GCCGCCTTTTATGCAGCCATGTGGGACAGCCTGGTGCGTGAGGGTGCCTG GCAGGGCGAAATCTGGAACCGGCGCAAAAACGGCGAGGTGTTTCCTGAAT GGCTCACCATCAGCGCGGTCAAAGACCCGGCCGGGCAAGCGACGCACTAT GTGGCCACATTTACCGACCTCAGCACGCGCAAGTCGGCGGAGGATCAGAT CAAGAGTCTGGCTTTTTATGACACCTTGACCGGTTTGCCCAACCGCCGCC TGCTGCTGGATCGGCTGAAACAAGCGCTGGCCAGCGGTGCGCGGCACCGG CGCCAAGGCGCGCTGCTGTACATTGACCTGGACGACTTCAAGACCCTCAA CAACACCTACGGCCATGATGTGGGCGACCAGTTGCTGCAGGAGGTGGCGC AGCGTTTGAGCCACTATCTGCGCGCCGGCGACACGGTGGCGCGTCCGGGC GGTGACTCCTTTGTGGTGCTGCTGGAGGCGCTGAGCACGAACTCGGTGGA GGCCGCAACCGAGGCCGAAAACACCGGTGAAAAAATCCGGCTCGCGCTCA GCCAGCCGTATCAGATCGCCGATCATGCGCATCGCAGCACGGCCAGCATC GGCGTCACCCTGTTTGACGACCGGCAGCAAGAAGGCATTGATGAGCCCTT GAAGCGGGCTGAACTGGCCATGTACCAGGCCAAGACGGCCGGGCGCAACA CATTGCGCTTCTTTGACCCGCAGATGCAGACCGCCGTCATGGCCATGGCG GCGCTGGAAGCCGATTTGCGCGAGGCGGTGCGCAGCAACCAGTTTCTTCT GTACTACCAGGCCCAGGTCAGCGGTGAGCGCCAGGTTGCCGGCGTGGAAG CGCTGGTGCGCTGGCAGCATCCGGTGCGTGGTCTGGTGCCGCCGGCCGAG TTCATCCCGCTGGCCGAGCAGACCGGCCTGATATTGCCCCTGGGCCAATG GGTGCTGGAAACCGCCTGCGCCCAGTTGGCGGCCTGGGCCAGCCAGCCCG AACGCGCGCATCTCACGGTCGCGGTCAATGTCAGCGCGTTGCAGTTTCAC CAGGCCGACTTTGTGGCGCAAGTGCTGGCGGCGCTCAAGCGCGCCGGCGC CAACCCGCAGCGCCTCAAGCTTGAGCTCACGGAGAGCTTGCTGGTGCACG ATGCAGAAGACGTCATCGCCAAGATGATCACCTTGAAAGAACAGGGCGTG GGCTTCTCGCTGGACGACTTTGGCACCGGGTATTCATCGCTGTCTTACCT CAAGCGGCTGCCGCTGAACCAACTCAAAATCGACCAGGGCTTTGTGCGCG ACATCCTGCACGACGCCAACGACGCCGCCATCGCCAAGATGGTCGTCGCG CTGGCCGATACCCTGGGCCTGTCAGTGATCGCCGAGGGGGTGGAAACCGA GGCCCAGCGCGACTTTCTGGCAGCCCAGGGTTGCCACGCTTATCAGGGCC ATTTGTACAGCCGCGCGCTGCCGATTGACGCCTTCGAGGCGTTCATGCGG CAGGTTTGA >Rfer_3282 transcriptional regulator, LuxR family ATGACAGAACCCCTCTCCACCCGCACCGCGCAGCACACCGCTGCGTCGCA AGAACCCGCGCTGGCCGAGGACGATCTGGGGCTGGTATTCGATCTGGCAC CGGTGGGTCTGTGCATCTCGCGCGAACGCACGATCCAGCGCTGCAACGCG GCCTTCGGTGCGATGTTCGGCTACGCCCCGGCGGAGCTGCAAGGTCGCTC GCTCGAATGCCTCTACCCCTCGCGCAGCGAGTTCGAGCACATCGGCGCGC AGGGTTTTCCGGTGATGCAAAGGACCAGCCACTACAGTGACGAGCGCATC ATGTGTCACCGCAGTGGCCGCCTGTTCTGGTGCCATGTGGCGGGCCGTTC GCTGCAGCGTGACCAGCCCTTCGCCTGTGCCGTCTGGATGTTCGAGGACA TCTCGTCGCGTCGACCGGTGGCCATGACCCTGACCGCCCGTGAACGCGAG ATCGTACGTCAGCTCGCGGCCGGCCAGGGTACCAAGCAAATTGCCCGCAC CCTGGGGGTGAGTCCGCGCACCATCGATGGGCACCGCGCGCGCATCATGA GAAAAGTCGGCGCGCAGAGTTCAAGCGAAATGATTGCCAAGCTGATCGGC TTGAGTTGA >Rfer_0922 multi-sensor signal transduction histidine kinase ATGCCTGCTTATTCTTTGGTTGCGGTGAAATCCTTGTCCTTGTCCCTGTC CTTGCTGCGTCGTCTATCCTGGCAGCGCTGGTTGCGCTGGAGCCTGCTGG CGCTGGTCACCGGGGTGGTGATCGCTTTGGTCGGTCAGTGGGCCGAACGG CGCGAGCTGCACAACCGTATTCAGGCCCTGCAACAGGCAGCGCAGTCGAC CGTGCTTGGACTGGGTGGCATTGCCGCAAAACATGGTTATCTGCCGTACG CGGCAACGCGCCACCCGGATGTGCAGGCCTTGCTGAGGCATCCTGCTGAC CCCTTGCTGCGCGACCGGGTGAACCGCTATCTGGCCGATTTCCAGACGCG TACCGATTCCGCCGCGTTGTTCGTGATGAGTGTCGATGGCTTGACTTTGG CCGCCAGCAACTGGAACAGCGCCGGCAGCTTTGTCGGCCAATCCTACCGC CAGCGTCCATATTTCAGGCAGGCCTTGCAAGGCCGGCACAGCTATTTTTA CGGCGTCGGTCTGACCACCGGCACGCCGGGTTTTTTCATTTCCGAACCGG TGCGCAGTGGCGACGAGGTGATTGGCGTCATGGTGATCAAGGTCAGCCTC GATACGCTAGAGCACTCCTGGGCCGACAGCTCCGACCCGGTCGTGCTGCA AGACAGTCGCGGCATTGTTTTCCTGAGTTCGGAGCCCGAGTGGCTGTATC GAAGCCGCGCGCCCCTCTCTGCCGATGATCTGGCCTGGCTGGCCAAGAAC TGGCAATACGGCGAGCGCACGGGTTACGACGTGCTGCCGTGGCGCGTGCT ACGCACGACGGGCTCGCCCGCTTACGAGCTGCACGCGGTCGTCAAGGGAC AGTTGCGGTCATTCCTGGCGCTGGAGAGCGTGCTGCCCGAACTGGGCTGG ACGCTGGTCGTCACCAGCGATCTGAAGGGGGTGACACAAGCCCGGCGCGA GGCGCTGGTCCTGGCCGCTTTGCTGGCTGCGGTGCTGCTGCTGGCGGGCC TGTACTGGCAATTGCACGAGCGCCGCTATTCCGAGCAGCGTCAGGCCAAG CTTGAACTGGAGCGCCGGGTGCAGGAGCGTACGCATGACCTGGAGCAGGC GCAGGCTTTCCGCAAGGCGATGGAAGACGCGCTGCTGGTGGGCATGCGTG CACGCGACCCGCAGGGACGTATCAGTTATGTCAACCGTGCCTTTTGCGAC ATGGTCGGCTACCGCGACGATGAATTGCTGGGCTGCGCGCCGCCCTATCC CTATTGGCATCCGGACGAGTTGGACAAATACCGGCGCGATCGCGAGGGCT CCATGGTGGCCGAGGCACAGCCCTACGGATTTGAATCGCGCATTCGCCAT CGCGACGGGCATGACGTGATCACCCGGGTTTACACCGCGCCCCTTATCGA CGCCCAGGGCCAGAACCAGGGCTGGATGAGTTCAGTGGTCGACATCACAG CGCAAAAACAGGCTGAGGACCGCCAACACGACCAGGAGCTCCAACTGCAG CGCAGCGCACGCCTGGCCAGCGTCGGCGAGATGGCCTCCACGCTGGCGCA TGAACTCAATCAACCGCTCATGGCCTTGTCGAACTTCGCCCTGGCCGCGC GCAACATCGCCAGCCAGGCGCAGATGGAAGTGCTGGTCTCGGCGCTGGAC GACATGGTCGAGCAGTCACAGCGCGCCAGCGAGATCGTGCAGCGCGTGCG TGGGTTCATCAATCCGTCCCGTGGCAGCTACGAAGCCTGTGATGTGCATG CGGTGATTGCCCATTCGCTGGTTCTGCTCAAGTCCGAACTGGAGCGTCAG GCGGTCACGGTGACGCGGCGTCTGGCCGAGCATATGCCGTCGGTGCGCGG CAATCGCGTGCTGCTGGAGCAGGTGCTGATCAATCTGTTACAGAATGCGC TGCAGGCGATGCAGGATCTGCCAGCGGCCGAGCGCGTGATCGACATCGAG ACGATGCTGCTCGGGCGTACCGTCCAGATTCGGGTCGGGGACGCCGGCCC TGGCGTCCCCGAGGCTTTGCTCGCCCAGGTGTTCACGCCGTTTTTCAGCA CCAAACCCGAAGGCTTGGGCCTGGGACTCAATATCTGTCGCACCATCGTT GAGGCCCACGGCGGTCACTTGACAGTGGCCAACCGCCTCGGCGGCGGCGC AGTGTTTGCCTTTACCCTGGCGCTGAGCGTATGA >Rfer_0489 HD-GYP domain-like ATGGACTACGTGATGCTTCCCGTGGCCCGGCTCAAGCTCGGCAACACGCT CCCGATTGATGTGTGGGCCCCGGACGGGCGCCTGCTGCTGCGCCGGGGGC AGGCGATCCTGTCAGAGCAGCAGCGCGAGATGCTGCATGCCCACCAGGCC TGCATGACCGCCAGCGATGCCCGCGCCTGGCAAAAAAGCTATGAGCGGCT GATCAACACCCTGCTCCAGCGGGGCGCCGATCTCGACGCCATCATGCGGG CGGAACTGCCCAGTGAGCTCGTGGAGACCGACTACCTGTCGGGCGCCCAG GTTCTGGGGGGCTGGCTCGATCTGCAGGAGATTCTGCGCGGGCTGCTGTA CCAGGGCGAGGCCGCCATCAACCCCTTGCCCCGGCTGGCGGGCACTGAGA GCCGGGCGCTGGAGCTGCTTCGCGCCGATCCGGATGAATGCCTGTTCATC CTGTTTCAGGCGCTGGCCGACATCAGCTTGGGCTACTGCGCGACCCATGC CCTGCTGTCGGCGGTGGTTTGTGCGTTGACCGCGGAAAAACTGGACATGG CGGCGGCTGCCGGCGGCAGCCTGTTTCGTGCCGCCCTGGTCATGAACATC GGCATGGCGCGGGAGCAGGACAAGCTGGCCATGCAGAGTTCGCTGCCAAC CGAGGCGCAGCGCGTGCTGGTGCGGGAACACCCCTGCAAAAGTGTCGAGC TGCTGCGGCTCATGGGGGTGAGCGACGAAGACCAACTGGACATCGTGCGC TGGCACCATGAGGTTAATGAGTCACACGGGCTGGCGCACAACGTGATGGC TCGGCGCCTGCTGCGCCTGGCGGATGGTTTTGTCGCCAAGATGGCGGCGC GCAAGACGCGACTCGCCATGTCGCCCTTGGGCGCGGCGAAGTCGGTATTT TTGGGCGCGACGCCAGACACCGCCAGCATCGGTTCGGCCATGGCGACGGC GCTCGGGTTCTATCCGCCGGGCACTTATGTTCAGCTGTTCAACGGAGAAA AAGCGGTCGTCGTGGCGCGCGGCCTGCGCGCCAACCAGCCCCAGGTTGTG AGTATTGTCAATGCGGGCGGCATGCCCGTGAGCAAATATCTCTACCGCGA GACCAGCAACCCGCGGTTTGCCATTCGCACGCCCATCAATGCGGAGCGGA TCAAGGTCAAGGTCAGCCTGGAGAAGGTGCAAAAAGCGCGCAAGGAACAC ACTGACTGA >Rfer_1541 UspA ATGGCTGTCAGCAATGTGGTGACGCTGACAAGGGACAGTCCCAAAGTCGA ATCCATTCTGGTTCCGACCGATGGCTCCGCCCTGTCGATGGCGGCGGCGC TCAAGGCGGTGGAATTTGCACAGCGTCTGCAGGCGAGCATTGTTGCCTTC AATTCGATACCGGTTTATCAGTACCCGGTGTATGTCGGTGGTATTCCTTT TGAGTACCCTTCGGAGGCGGATTACGAGACGCAGTGCCGAGCCGTCGCAG AAAGGTATCTGGGCCTGGTGGCCGATGCGGCTGCCAAGCAGGGCGTGCCA GTGGAGACGCGAATTGAATTCAATGGCAATACGGCACAAGCCATTGTGGA GCTCGCCCAACGCGAGCACTGCGGCATGATCTTTATGGGTTCGCACGGGC GGGGTGGCTTGTCCCGCGCCTTCTTGGGCAGTGTCGCACTCAAGACTTTG ACCCAGGCCCATGTGCCCGTCATGGTGGATCATCCGACGGACGAAGAAAT AGCCCGCGCGGAAGAATTGATGCGTCAAAACGCCATCGAACCCTGA >Rfer_2495 diguanylate cyclase ATGCGTTTTCTCGGCAGCCTCCACATTGCGGTGGCCATCTTGTTACTCTC CATCGGGGTCGGGCTGTACGCTGATCTCAAGAGCGAGCAGATGCACGGGC AAAGCCTGCGGATACAGACCGGACTGGAGCGTATGGTCCGACTGAACCAG TCGCTAACCAGTGTGATGGCCACGGCTGTGATCGAGAAGAACAGCCTGCG TGCGGCCAGCTACAACTCGCTGCACACGAAGCTGGAGGCCACCATGCAGG AGGTCCAGGCGCTGACACAGCACATGACACTGGCGGGTGAAATCCTGGCA CTGCGTGACGAGCAGCGTGCCTTGCGTGCACAGGAGAGTCAGGTTTTTGT GCACATACGGGACGAGCAATGGGACGCCGCCTACAAGGTCCTGTTGGGCG GGGATTACGTCATGGCGCTGAAGATTTATGAAATCAACAGTGAATCGGCC GTCGGCGCCCTGACCATTGAGCTGTCCAATACCGCCCGGCGACAAGACCT GCTGCGCCAGGCAACGCTGATGCTGCGCCTGGCGGCGGCAGCGCTGCTGC TGTGGACGGGGTGGCGCTATTCCCGCCGTCTACAGGCCGAATTGGCCGAG CAGGTGCGCTTGCGTGGGGAGGTCACTGCGGCCAATGAGGCGTTGGAAGA GAAGGTCCGGCTGCGTACCGCCGAGTTACAGGCCGCCAACAGCCAGTTGG AAACCCTGAGCACCACCGATGGGCTGACCGGCCTGGCCAACCGCCGCCGT TTTGACAAGTATTGGGCCGAGGAATGGCAGCGCGCACTGCGCCAGGCGAC GCCGCTGGCGGTGATCATGATGGATGTGGACCACTTCAAGACCTATAACG ACCACTACGGGCACCAGCAGGGAGACGAGTGCCTGCGGCGCGTGGGCGAG GTGCTGCGGGCCACGGTCAGACGCGCAGGTGAACTGGCGGCACGTTATGG CGGTGAAGAATTTGTGGTGGTCATGCCAGGTGCTTCGTTGGCGCAGGCGC AAGAAACCGCTGAGTCGATCCTGGCCGCCATTCGTGCCGAGCAGATGCCC CATGCCAGTTCACCGGTCGCCAGCGTGGTGACGATCAGCCTGGGCGTGGC AGCAGGCACCCCCGGCCCGGCCGGTGACCGTGCGCGCATGCTGAACGAAG CCGATGTGGCTCTGTATGACGCCAAGCACCAGGGCCGCAACCGCGTGGTT CCATCTTTGCCAGGACTGACCCAGCCGAACGTTACAAACGCCATCAGCAA TACCGTCACGCTGCTTTAA >Rfer_1887 diguanylate cyclase ATGGAACCTGAAAAACTCGATGGCGGCGCGAGCTGGCCACTGATCCTTGA CGCCGTGGAGCTGGGTCTGGTGCTGGTGGACGCCGACGCGCGCGTGTTGC TGTGGAACGCCTGGCTGGCCCGCCACAGCGGGGTGAGCGCCCAGACAGCC CGCGGTCAGCCCTTGGCCGGCGTGTTTGGCGCGGGCCTGTCGGCCTCTTT TCTGACCGCGTTGAGCAACACCCTGCGCTACAGACTGCCGGTGGTGCTGT CCAATGTGCTGCACTTTTGCCCCCTGCCCCTGTACGCGCAGACACCAGCA GACGCAGCGGCCGCCCGGATGCCGCACGCCATCACCATGACACCATTGGT GCTGCCCCCATGGGGTGCCTGTTGTCTGATTCAGATCACCGATTCCAGCC GGGCAATTTCCCGCGAAAAAGTACTTCAAAGGCAATCAGAACGTCTCAAC CGCGAGGTGATGACCGACAGTCTCACACGCGCCTTCAGTCGGGGCTTTTT CGACCATTTCTACCAGCAGGAATTCGCGCGGGCGCAAAGAAAAGGAACCA AGCTGTCGCTCATCATGATCGACGTGGATTACTTCAAGGACTACAACGAT GCATATGGTCACCCTGCCGGCGACAAGGTGCTCATTGCCGTGGTACAGGC CCTTCAGGCCGTCCTGTTGCGTTCAACCGACAAGCTGGCCCGCTATGGGG GTGAAGAGTTTGCCGTCATACTGCCCGACTGCGGTGAGCACAAAGCGTTG GCAATTGCCGAACTGCTCCGGACCGCGGTTCTGGCGCTCAATCTGCCGCA TCGAAAATCCGCCATATCGAACCAGCTCACCGTCAGTCTGGGCACCTCCA CCCTGAAAGCTGGCCAAACCAGCAGCGCACAAGCGCTGCTGGATGCGGCT GATCAGGCCCTGTACGCCGCCAAGAACCAGGGGCGCAACTGCGTGCAGAG CCGCAGTCCACAGACCGTCGCAGCGCCTGCCTGA >Rfer_0005 diguanylate cyclase ATGATCGCCAAGAAGCCTTTTGAAATTGCCCGTGAAACGCTCAGGCAACT CACCGCACGCAAGTTGGCTCCAACGCCGATCAATTACCAGGCTATTTACA ACGAGGTTGCGGGGGTGGCCACCGACCCCCCTTTTCCGACCGACCGCTTG CGCGATATCGCCCAGGCCCTGCCGACAAAAACACCCGGGCAGCAAAAGCA GCGTGCTTTGTTGGATTCCGCCATCGGGCAACTCAACTGGGACGGCGTAA AGAGCGCCCTCATGGCTTACGGCGGCTTCAGCCCACCGGCAGCGGACCCG GCCACGGCCACGCCATCGACCGGGCTGCCGATGCCGGGCGCCAGCGCCCC GGGCGACGTGAGCGCACCCGCGCTGACCTTTGATTTTTTGCAGCAAATGG CACGGTTGATTGAGTTCACACTGCCCGCACTCGGTTCCGATGATGCCCGC TTCAACGAGCAGACCCAGACCCTGCTCAAAGCCATGCGCCAACCTGGGGC TGACGTGGTGGCGCTCAAATTGATGCTGGGCAGCTTTAGCGACCGTCTTT CCTTTGCCGCGGAAGATCAGGCCGAGATCAAGGTCACGCTACTCAAGCTG CTGCACCTGATCATCGAAAACATCGGTGAGCTCAGTCTGGATGATCGTTG GCTCAAGGGCCAGATTGAGGCCCTGATGACGGCGTCGACGCCTCCGCTCA CCTTGCGCCGTCTCGACGACGTGGAGCGGCGCCTGAAGGACGTGATCTTC AAACAGACCGAGGCCAAGGGTCGGGCCCTGGAGGCGCAGGAAGAGATGCG CCAGATGCTCGCCACCTTCATCGAGCGGCTGTCGCAAATGACCGAGTCCA CCAGCGCCTACCGCGGCAAGCTCGATGACAACGCACGCCTGATCGAGCAA GCCAGGACCCTGGCTGAAATTGCGCCGGTCTTGAAAGAAGTGGTCGGCGC GACCCGCACCATGGCCCACGACAGCCTGACGGCACGTGATGAACTGCGTG GCATGCGCGAAAAGGCGCAAAGCACCGAGGCCGAGCTCGTCAAGCTGCAC CAGGAGCTTGACCGCGTCAGCTCCCAGGCGCGGCATGACCCGCTGACCGG GGCACTTAATCGCAAGGGGCTGGAGGAGGCCGTCAACCGGGAGGTGTCCA ATGTGCGACGCAAAGAGACGCCGCTGTGTGTGGCCCTGCTGGACATTGAC AACTTCAAGAAGCTCAATGACGCCCTGGGTCACGCGAGCGGGGATGTCGC GTTGGCGCATCTGGCCACGGTAACGCGTGAGGTCATGCGCCCGCATGACA CGCTGGCGCGCTACGGCGGTGAAGAGTTCGTGATTCTGATGCCCGACACC GCCCTGGATAATGGCATTGAAGCCATGACCCGGTTGCAGCGCGAGCTGAC CACACGTTTCTTTCTGGCAGGCACCGAGAAGGTGCTGATTACCTTCAGCG CCGGTGTGGCGCAACTGGCCACTGACGAGACCGGTCAGAGCGCCATCAAG CGCGCCGACCAGGCCATGTACCTGGCCAAACGCGCGGGCAAGAATCGCGT GTTGGGCGCTTAA >Rfer_0563 two component transcriptional regulator, LuxR family ATGATTCACGTTATTCTTTGCGACGACCACGCCATGACACGACGCGGCAT CCGCGACACGCTGGCGGAGGCGGTTGATATTCAAGTCACCGCCGAAGCCG GTAGCTATGCTGAAGTTCGCGAGGCCATGCGCAACGCGACCTGTGACGTG CTGGTCCTCGACCTCAATCTGCCGGGCCGAGGCGGTATGGAGGTTTTGTC CAGCCTGAAAGAAGCCCACTCACCCATCAAGGTGTTGATCGTCTCCATGT TCCCGGAAGACCAGTATGCGATTCGGTGTCTGCGGGCTGGCGCGCAAGGC TACCTGAACAAGGCCGGCGACCCGGCCGACCTGATCAGCGCGGTCCGGAC TGTTGCCCAGGGAGGCAAGTACGTCACACCCGCAGTTGCCCACATGCTGG TCGAAAGCCTGAGCATCCCCGAAAACCAGACCCTGCATGCCGCATTGTCA GAGCGGGAACTGCAGACCTTGCTGAAAATTGCCTCTGGCAAGCGCCTGGC GGACATCGCCGAAGAACTCATGCTCAGCCCCAAAACCGTCAGCGTGTACC GCGCCAGGGTGCTGGAAAAACTCAAACTCTCCAACAACGCCGAACTCACG GTCTACGCCATTCGCAACGAGTTGGTCTGA >Rfer_0503 two component transcriptional regulator, winged helix family ATGAGAATTTTGCTGGCAGAAGACGACTCGATGTTGGGCGATGGGCTGCG CGCGGGCTTGCGCCAGCTGGGGTTTCAGGTGGACTGGGTGCGCGATGGCC TGGCGGCCGAGCGCGAGCTGGCCTGCGGCGACTACGCGGCCGCGGTGCTG GACCTCGGCTTGCCCTTGAAAGACGGCATCGATGTGCTGCAAGCTGTGCG GGCAAGCAAGATCACCACCCCGGTGCTGGTGCTGACGGCCCGCGACGCCG TGCCGGATCGGATCCGCGGCCTGGACCTGGGGGCTGATGACTATGTGGTC AAGCCGGTCGATTTGCATGAACTGGGTGCGCGCCTGCGCTCGCTGGTGCG CCGCGCCCATGGGCAGATGCAGGATGTCTTGCGTTGCGGTGCGGTGCTGC TGGAACCTTCGGCCCGGCGCGTCAGTCTGAACGACGAGCCGGTGGCGCTG TCCACCCGTGAATTCGATTTGTTGCACGTGCTGATGCTCAACGCCGACCG CGTGTTGTCGCGGGAGCAACTGGAACAGCAGCTCTACAGCTGGGGCTATG AAGTGGAAAGCAATGCAATCGAGGTCCACATCCACCATCTGCGCCGCAAA TTGCAGCCCGACTTGATCCAGACCGTACGCGGCATTGGGTACACCGTGCA ACGCGGGTCAGCACCGGCATCGGCGTCCACATGA >Rfer_1539 two component transcriptional regulator, LuxR family ATGACCGGCGTTTACCTGGTTGATGATCACCAGATCATGCGCGAAGGCTT GCGCGCCCTGCTCGAGGCCAAGGGTCACAAGGTGGTGGGTGAGTCAGCCG ACCCGACCGAAGCCCTGGCAGATTTGCTGCGCATGCGCCCCGAGGTGCTG CTGCTCGACCTGAATCTGGGTGAGCGCTCGGGTTTCGAGTTGCTCGCTGA GCTGCAACGGCGCCACCTGCCGACGCGCTGCGTGGTGCTGACCATGTCGG CGCAGCCGCGCCAGGTGGCCGAGGCCTTGCGCATGGGCGCCAGCGGCTAT GTGCTCAAGGGCTCAGCGGTCAGCGATCTGCTGAGCGCGGTTGACGCGGC GGTGCGTGGCAAGAAACATCTGGGTGCCGAAGTGGCCGACCTCGCGCTGC AGGTGTTTACGCTCAAGGACGAAGATCCGTTAAGCACGCTGTCCCCGCGT GAACAACAAATCATCATCATGGTGGTCAAGGGCGCTTCCAGCTCCCAAAT TGGCACTCAACTGCATTTGTCGCCCAAAACGGTCGCCACCTACCGCAGTC GCCTGATGGCCAAGCTCGGTGTGCGCGACGTCCCGGGCCTGGTGCGACTG GCCGTGCGCCATAAGCTGATCGATGCCGACGAGTCAACCAACCGTAGCCG CCGCGCCACGGACGGGGCCCTAGGAAAAGTGGAACAGCAGTGA >Rfer_3097 two component, sigma54 specific, transcriptional regulator, Fis family ATGGGCGAATCGCTCGCTGATCGCTTCGACCTGGAAGGGTTCAGCCATGA TTGGCATCGTACCGGCGCGGCCGCCCTGACCGCCTTGCGCCTGAGAGACT ATGCCTTGGTCATCAGCGACATCCGCCTGCCCGACATGACAGGCGATGTG CTGTTTGAACAACTCCTGACGGAACAACGCAGCCTGCCACCGTTCATCTT CATAACCGGACATGGCGACATCGACACCGCCGTGCGCCTGCTCAAACGCG GCGCGCAGGATTACATCACCAAGCCCTTCGACCTTGATGCCTTGATTGAC AAGATTCACGGCATCGTCGCACCGGAGGATGCGTCAGGGACCGGCAGCCT GGGGTGTTCGCCGGTCATGCGCCAGATCGAAGCCATGCTGCCTCGGTTGG CCGCGAGCGCCGCCTCGGTACTGATCACCGGTGAATCCGGCGTTGGTAAG GAGCGTGTGGCGCAAGCGCTGCACCAGTTGACCGGCGCCGACAAGCCCTT TATTGCGGTCAACTGCGGCGCGCTGACCGAAAGCCTATTGGAAGCCGAAC TCTTTGGTTACGAAAAAGGCGCTTTCACAGGTGCAGTCCGCACAAAAAAG GGCGTTTTCGAGCAGGCGCATGGCGGCACATTGTTACTTGATGAAATAGG TGACATGCCTCTATCTATGCAGGTCAAGCTGCTACGCGCGCTGCAGGAGC GCTGCATCGTACGGGTCGGTGGAGAAACCCCGATTCCAGTTGATATCCGC CTGGTCTGCGCCACGCATCAAGTGCTGCAGGAAGCGGTAATCCGGGGCGA TTTTCGCGAAGACCTGTATTACCGGATCAATGTGGTCGAACTGCGCATCC CGCCACTACGCGAACGCAGCGAGGACATTCTGCCGATTGCCCAGCACTTG CTGGCAGAGATTGCCGACGCCAGTGGCAAGCCACCCCCCGGTCTGACGCC AGCAGCCGAACATGCGATCAAGGCCTACCGCTGGCCCGGCAACATTCGGG AACTCAAAAACACTCTGGAGCGCGCCAGCTTGATGAGCGACGGCCGCTCG ATTTCGCATGACATTCTGTTCGACCGCCCCGCGCCGCCATTGAGCGGGCA GCTCGATATGGCGGGCAGCCTGCGCGACTATTTGAATGAATGCGAGCGTG ACTTTATCGTGCACGCACTCGACGGCTGCCAATGGCAGATTCAATGCTGC GCGGACTCATTGGGCATTAGCCGTAAAAACCTGTGGGAGAAAATGCGCAA GCTGGAGATCGTCAAAGGCAGCGATGCGGATTAG >Rfer_2544 diguanylate cyclase ATGCTGGTAACTTCGATCAAGCGCTGGCTGGCACCGCCCGTTTTTGAAGG CGCGGAGGAAAAGACGCGCCAGGCGAGTTTGATCAACATGGTCTGCATCA CCTCCCTGGCATTTACGCTGGCAGTCATGGTGGGTGCTTTGATGGGCGGG AAAACCCCGGTCAGCACCCTGATCATCGACTTGGTGGCGTGCGCAGTGAC CCTGCAGTTTCGCCACTGGCTGCGCAGCGGCAGGGTGGTGCTGGCGCGGT TCGGAATGGTCATCTTCGGCCTTGTCTTCATCACCGCGGTCACAGCCGAC ATAGGCACCATTCGCACGCCGACGGCCGCCATCTTGCTGTTTTGGGTGCT CATGACAGGCTTGATCTTTGACCGGCGCGGCATTGTGATCGGCACCATCG CCGCCTCGATGGCGGTGCTGGGCTTGATCGTGGCCGAGAATGCCGGGTGG CTGAGGCCGCCTTTTTACGACGTTGGCGTGACGCAGTGGGTCACCTTCAC CGCCCTGTTCGGATTCACCAGCGGTCTCACTTATTACATCAACCAAGGTA CAAAAAGCGCGCTGGCGCTTGCCAGGAAGGAAATCGAGCAACGCAAGCAG GCTGAACAGTCACTCAAAGCCGCCAATGAGGAACTGCATTTGCGTGTGTT TGAAGTGCAAAGACTGCAGGTCGAATTGCACGAACAGGCGATTCATGACC CGCTGACGGGTCTTTATAACCGCCGCTATCTGAGCGATGCGCTGGCGCGC GAAATCATACAAGCCAAGCGGGCGAACAGTAGCCTCACCTTTGTCATGGC AGACATCGATCATTTCAAGTTTGTCAACGACAGCTACGGGCATCTGGCCG GCGACGAAGTCCTGGTGCAGGTTGCCAGTCTCCTGAAAAAACATGCCCGC GGTTCCGACATTGCGTGCCGCTACGGTGGTGAAGAATTCCTGCTGGTGTT TCCCGGAACAAGCCTGGAACTTGCCCACAAGCGGGCAGAAGAAATCCAAC AAAATTGTGCTGCGCTGAGCATCCAGCATGAAGGAAAAAATATTGCTGTG ATGCTGTCATTTGGCGTGGCGGCCTACCCCGATCATGGGCAGCAATGGGA ACAAATCATCGTCAAGGCCGACAAGGCTTTATACCAATCCAAATGCAACG GCCGCAATCAAGTCACCATATTCAGGGATGAGGAATTCCCCACTTGA >Rfer_2487 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGAGGGCTGAAGTCGATGTCATCGCGGGTGGCGAATGGACGCCATCAGC GGTCAGTTTCGCAAGCCACGGATGGTCAGCACCCGCCCCTGCACAATTGC CTGCGCAGGTGCTGCTGGTTGACGACGAACCGAGAATGCTCAGCAGCCTG GGCGAACTGCTCAAGGATCGGGGCTTTGTCCTGACCAGCGCAGCCAACGG CGGTGAAGCGATCCGGTATCTCGGCCAACAACCCTTTGACTTGGTGATTC TGGACCTGCGCCTGCCCGATATCAGCGGCCACGACATCATGGATTTCATG AACTCCCAGCAAGCCGATGCCAACATCATTGTGACCAGCGGCGACCGCGG AATTGACGCAGCAATTGGTGCGCTCAAACGAGGCGCCTACGATTACCTGC GCAAGCCCTACAGCCCGGAAGAACTGCGCAAGACGGTGGACAACGCCTTG AAGCAACGCCGCTTGCAGGCCGAAAATCGGCATATCGCCTGGCAACTTGA AAGCTCCGAAAGAAAATACCGTTATCTGGTCGACAGTTCGCCCGACATCA TCTACACGCTTGATCATGAAGGCCGCTTTACCTTTGTCAACGACCGGGTG CAGCAGTTGTTGGGTTTCAGCCGCGAGGAGCTGATTGGCGAGCACTATTC TGTGCTCATTCAAGAAGACGATGTACTGCGCGCAAATTATGTTTTCAACG AGGGACGAGGCGACTATCGCCTGTCTCGCAACGTCGAGCTGCGGCTCAAG TCCCGCCATGCCAAAGGTGAAGTGCGCACCTTCACCCATGAATTGATGAC GATTTCGTTCAACGCCAGCGACACGTCACAAGAACCTGATTCGACCCAGC AAGAACTGTTTGGCACCTACGGCGTAGCCCGTGACATTACCGATCGCAAG CGGGCTGACGAACTGATTACCTATCAGGCCTACCACGACATCCTGACGGA TCTGCCCAACCGGGTGCTGTTCAAAGACCGCTTGGGCCTGGCGGTGCTGC AGGCCAAGCGAAATGACGCCAGTCTGGCCCTGATGTTTATCGATCTTGAT CGCTTCAAGCTGGTTAACGACACACTGGGTCACGTCATAGGCGACAAGTT GCTGCAACAAGCGGCCATTCGCCTCAAAGCCTGCCTGCGCAGTGGCGACA CACTGGCGCGGCTGGGGGGGGATGAGTTTACGGCGGTCTTGCCAGAGTTG AGTGATCGACAAGACGCTGTGCTGATCGCAGAAAAGTTTCTGGAATGTCT GCGCCAGCCGTTCCAGCTCGCCGGACAGTCGGTCCACATCTCCGCCAGCA TCGGTATCGCCATTTATCCTGGCGACGGTGAATCGACCGATGAACTGATC AGAAACTCCGATATCGCGATGTACCACATGAAGGCCGAGGGCAAGAACGG CCACTCGTTTTTCGACCGTTCAATGCTGGATGCGTCCTGCCAGAAGATTG AGCTAGAACACAGTCTGCGACTGGCACTGGAACGGGGCGAGCTGGAGATG TACTACCAGCCCCAAGTGGATGTCAGGACACAAAAAATTGTGGGGGCCGA GGCGCTGATGCGCTGGAACCATCCTGAACGCGGATTCCTGGGTGCCGGCG ATTTCTTGCCGTTTGCCGAGGAAAATGGTTTGATTATTCCCATCACCGAC TGGATGCTGGAGGCCATCTGCCTCGACCTGCTGGACTGGAATGCGGCCGG CGGCGAGCCGGTGCGGCTGTCACTCAATCTTTCTCCCCAATACCTTGATC GCGGAGACTTCTTTGACAAGCTCAAGAATGCGCTGACCCTGCACCATATC AACGCGTCCCAGATTGAGGTCGAAGTGACCGAAAACATTTGTATCCACAA TCCGCAGACGGCCATTGAACAACTCAACAAGCTCTGTCAACTCGGGGTCA GCGTGGCCATCGACGACTTCGGAACCGGCTATTCCTCCTTATCCTATTTA CATCGATTCCCGATTCATACCATCAAGATCGATCGTTCGTTTGTGATGAA AATTCAGAACGACAATTCGCAATGTCCGGTGGTGCTCGCCATCATCTCGA TCGCGAAAGGCTTGAGTCTGAACCTGGTCGCGGAGGGTGTTGAGACCCAG GTTCAGGAACGCTATCTGGAGCGTTCCGGCTGTAACACGATGCAGGGCTA CCTGTATCACAAGCCCTTGTCGCAGAAGAAAATGCTTGCATTGCTGCGCG TGGCCTGA >Rfer_2356 PAS/PAC sensor hybrid histidine kinase ATGAGCAATCCTGATACCCCCAGCAGCAATGGTCGTGAGTCTTCTGTCAC CCACGACGCGCCAAGTGCGGCGCAGCTGATGCGTCGGCGAGCCGAAGACA TGGCCCTTGAAAAATTGGCGCAATTGCCCCAGAGTCTGCAAGTGCTGTCA CCCGGGGAGATGCAACAACTGATGCACGAGCTGGCCGTGCATCAGATCGA GCTGGAGATGCAAAACGACGAACTGCGCCGGGTACAACAGGAACTGGAAA CCTCACGCGCACGCTATTTCGACCTGTATGACCTGGCCCCGGTGGGCTAC ATCACCGTCAGTGACGCCGGGATGATCCTGGAGGCCAACCTCACCGCAGC CACCCTGCTGGGCGTGCCGCGCAGCGCGCTGGTGAAGCGGCCGATCAGCC GCTTCATTGTCAAGTCGCAGCAGGATATCTACTACCAGTACCGCAAACAG CTCGTGGAAACGGGTCAAGCCCAGACCTGCGAGCTGCAGGTGCTGCACAG TGAGGGCTCCGCGCTCTGGGTCAGTTTGGCCGCCACCGTCGCGCAGGAAA CAGATGGCGCGACCATATTGCGCATCGTGCTGAACGACATCTCCGAACGC AAGTTGCTGGATCAGTCGCTGCGGGAGACCAACGTCAAGCTGGAGAGTGC CCTGTTTCTGGCCGACAAAGCCAACCTTGCCAAGTCGGAGTTTCTGTCGG GCATGAGCCATGAGTTGCGCTCACCACTGAATGCGGTTTTGGGCTTTGCG CAGTTGATTGAGACGGGCACGCCTGCGCCCACGCCGGGCCAGCAAGCCAG CCTGGAACAGATTCTGCGGGGCGGCTGGTATTTGCTGACGCTGATCAACG AAATTCTTGACCTGTCCCTGGTCGAGTCCGGCAAGCTGTCGCTGTCGATG GAACCGGTCTTGCTGTCCGAAAAGTTTTCCGATTGCCGAGCCATGATCGA CCCGCAGGCGCAAAAGGCCGGCATCCGTGTCAGCTTTGCGTCATTCGACA GTCCATGCTTTGTTGAGGCCGACCGCACCCGCCTGAAGCAAGTGATCGTC AATTTGCTGAGCAATGCCATCAAATACAACCGCGCTGGCGGCTCTGTCGA AGTGACCTGCAGCACGCCCGCAGCGGGACGTATCCGCATCAGCGTGATTG ATACCGGACCGGGTTTGTCCGACAACAAACTGGCCCAACTGTTCCAGCCC TTCAATCGTCTCGGCCAGGAGGCTGGCACGCAGGAGGGCACCGGCATCGG TCTGGTGGTTTGCAAGCGGCTGGTTGAAATGATGGGCGGTGAAATCGGTG TCCATAGCCGCGTTGGGATTGGCAGCGAGTTCTGGTTTGAGCTCAAGCTC GCAGCGCCACCGCCAACGGCCGTCAGCGGTGAGGCGTCGGAGCTGGCACA GGCGCAGGTTCAGGATGAGGCCGAGGTACACACCTTGCTGTATATCGAGG ACAACCCCGCCAACATGGAACTGGTCGAGCGGATCGTTGAGCGCCGTTCC GAGCTGCGCTTGTTAAAGGCGGGCAATGGTTCGAGCGGTATCGCGCTGGC GCGCATGCATCTGCCCCAGGTGATCCTGATGGACATCAATCTGCCTGGCA TCAATGGCTTTCAGGCCTTGAAAACCCTGCGTGAGGACCCTGCAACCCAA CACATCCCGGTGCTGGCCCTGAGTGCCAATGCCATGCCCCACGACATTCA AGCTGGCCTGGCGGCAGGCTTTCTTCGCTACCTGACCAAGCCCATCAAAA TCAAGGAGCTGATGCAGGCCTTCGATGTGGCGCTGGAAGCTGCAAAACTG CCCCAATAA >Rfer_0569 MCP methyltransferase, CheR-type ATGGCGCTAGTCAGGACGGATGTTCGTCCCAATGCCGCAGTGCGTATGCC AGTGGGCGGCGTATCGGACGCGGGTGGCGCGGACATGCAGGGTCGTGAAT TTGCCTGGACCGATGCTGATTTTGACCGGGTTCAGGCCTTGATCTATCAA CGCGCCGGCATCAGTCTGCACGACGGCAAACATGCCATGGTGTACAGCCG CCTGTCGCGGCGCCTGCGCGATACCGGGTACCAGAGCTTCAAGGACTATC TGGGTTGGCTTGAGACGCATGACGGCCCCGAATGGCAGGAATTTGTCAAC GCCCTGACCACCAACCTGACTTCTTTTTTCCGAGAGCAACACCATTTCGA GATTTTCGCCAGCCACTTGAAATCCAGGCCCGCGGGCACGGCCTGGCGGG TCTGGTGCAATGCCGCGTCGACCGGTGAGGAACCCTATTCAATCATCATG ACCGCCCTGGAGGCGCTGGGTCCCCAGGCGAATTTGACGCTGACGGCCAG CGACATTGACTCCAAGGTACTGGCTTCTGCCGCGCAAGGCGTTTACCGGC TTGAAGGACTCAAGGGTGTTAACGAGGAGCGCATCCAACGTTTCTTCCTG CGCGGCAAAGGGGGCAACGCGGGCATGGCCCGCGTGAAGCCAGAACTGCA GCGCATGATTGAATTCATCAGTGTCAATCTGATCCGCGATGACTGGCCGT TTCGCCAGCCCTTTGATGTGGTGTTCTGTCGCAACGTCATGATTTATTTT GATGCGCCCACCCAGCGCAAAGTGCTTGAACGGATCCATCGCGTGATGGT CCCCGGGGGCTTGCTGTTTGTGGGGCACGCTGAAAATTTCAGCGAGTCGC GCGACTTGTTTGTTCTAAAAGGCAAAACCGTCTATGAACGTCGTTGA >Rfer_1926 UspA ATGTACAAAAAAATTCTTGTCGCCACCGATGGTTCCACCTTGTCAAAAAA AGCGGTCAGCAGCGCGATTGACCTGGCGGCGCTGTGCGAGGCCGAATTGG TGGCCATGAAAGTCATCCCGCGCTACCCGCAAAGCTATTTTGAGGGCGGT CTGGCCTTGCAGGCAGCCGAGGTTAGCCGGGTTGAAAAACAGTGGGCTGA AGACGGTCAGGCCGTTGTCGACGCAGTGCAGCAAGCCGCGCTGGCCAAAG GCGTCAAGACCAAGGCCATCACGGTCAAGTCGGACCTGGTATCGGACGCC ATCATTGCCGCAGCCAAAAAACACAAATGCGACTTGATCGTCATGGCATC ACACGGCCGCCGTGGCATCAAGCGCATGCTGCTGGGCAGTGAAACCCAGC TGGTGCTCACACACTCTCATGTGCCGGTGCTGGTGCTACGCTGA >Rfer_3025 cyclic nucleotide-binding domain (cNMP-BD) protein ATGAAAGTTGATCCCGCCATTGTTCAAATGTCCGCTGAAAACGTGCGGGC CGAAGTGATCGTGCGGCAACCTGCGCTCAAGCTTGACCCCGCCATCATTC AGAAAATCAAGCAACAGGTGCCGATTTTCAAAGGCATGACGCCGGACTGT TTGATGCGCACACTGGCGATGGCTGAATATTTTTCGGTCAAGGCCGGTGA AGTGGTGTTCAACGAAGAAGATATTGGCGAGTCATTTTTTGTTCTGATCG CAGGTGAGGTGAGGGTTGAAAAATTGCGCAACGGACAGGTGGTCGAGCTG ACCCGGCTCAGCGCTGGCCAATGCGTGGGTGAGATGGCGCTGGTGAGCAA GCAGCTGCGATCCGCCACGGTGCGCGCCATCCGTGATACCGTGACCATGC GCTTCTATCGCGAACTCATTGATACCAATCCTGAAAGTGCACACATCATT TACCGCAATATCGCCAGCATTCTCGCCAGCCGACTGGACGATTCAAGCGT GATGCTTGCCGATCTGGCGAGGCGCCAAACCGCTCCTTAG >Rfer_3820 two component transcriptional regulator, winged helix family ATGCGTTTGCTGCTGGTCGAGGACGACTTGATGATTGGGGAATCCGTGCT GGACTTGCTCCGGGCGGAAGGCTACGCGGTCGATTGGGTCAAGGATGGGG AGATGGCCGACACCGCACTCGACTCCCAGACCTACGATTTGGTGCTGCTT GACCTGGGGCTGCCGCGCCGGGATGGGCTTGCGGTATTGCGCCGGCTGCG CGCTCGCAAGGACCGCACACCGGTGCTCGTCGCCACGGCACGCGACGCCA TAGCGCAACGCGTTGAAGGCCTGGACATGGGTGCCGATGACTACATCGTC AAGCCCTACGAACTCGATGAGCTGCTGGCCCGCATACGGGCCTTGATCCG CCGCGCGGCTGGCCGCGCAGAGCCGGTCTATGAACACCTGGGTGTAAGCA TCAACCCGGTCACGCGTGAGGTGCTGCTTGACGGACAGGCCGTGGTGCTG TCGGCACGGGAATGGTCCATCCTGGAACTGCTGCTTGCGCGCCCGGGCAT GGTGCTTTCCCGCAGGCAACTTGAAGAAAAACTCTACAGCTGGAAAGATG ACCTCAGCAGCAATGCGGTCGAGGTGTATATCCACGGACTGCGCAAGAAA CTGGGGCCTCGCATCATCCAGAATGTGCGGGGTGTTGGTTACATGATTCC CCAAAGCGCCCCATGA >Rfer_3523 two component transcriptional regulator, winged helix family ATGCGATTATTGTTGGTGGAAGATGATGTCATGGTGGCCAGTGGCATCAA GCTCGGCCTCACCGACGCCGGTTACGCCGTGGACTGGGTTAGCAATGCCG AGCGCGCGCTGGAAGCCATGCGCCACGAATCGTTTGACGTGGCTGTTCTC GACATTGGTTTGCCTGGCATGGATGGTCTGGCGCTGACCCAGCGTTTGCG CAAAGACGCGCCCGCCATGCCCGTGCTGCTGCTCACCGCGCGCGACGCCC TGCACGAGCGGGTGCAGGGGCTCGACACCGGAGCCGATGATTACATGGTC AAACCGTTCGAGTTGCCCGAGCTGCTGGCACGCCTGCGCGCACTCTTGCG CCGCTCGCAGGCGGCTACCTCGGCGGTGCTCAGTTTTGGCGCGCTGGAAC TCAACACGGCGACGCGGCTGGCCTGCCTGCGGCCCAGCGGCCAGGCAATC GAGCTGGGGCCGCGTGAGTGGACGGTGCTGGAGTACCTGCTCATCAACGC GCCCAAACCCGCCAACAAAGACAAGCTGCTGCAGGCGCTGACCGGGTGGG ACAAGGAGATCACACCCAATGCGGTGGAGGTGTACATCTCCCGCTTGCGC GGCAAGTTGGAGCCGCATGGCATCGGGCTGCGCTCGATTCGCGGCTTTGG CTACCGTCTGGAACTGATCGAAGCCGGCATAAGCGATTCGCGCCATCCAG CGCCTTGA >Rfer_3522 periplasmic sensor signal transduction histidine kinase ATGCAGCTGGCAACCATGTCCTCCGGCCTGCAGCGGCGCTTGCTGCTGCT GTTATTGGTGCCCCTGTGTCTGCTGGCTGGCGTCAATGCCTGGTTTGACT ACCGTTATGCCGACGCTGCCGCCTTGCAGCAAGACCGCCAACTGCTCAAG CTGGTGCCCTTGCTGGCGGACTCGGTGATCGCCAGAGGCAAAACGTCCGA TGCCCCGCCGGTCCTGCTGATGGCCCCGGTCATCGCAGAATTTCTCAGAG ACCGGGTCGGTCTTTCAGCCTTCTGCATTGCCGATCTGGAGGGGCGGGTG CTGCTGGGTCATGACTGGTTGAGCGGGTTGCCGCCGACCACACGCGAGCC TGAGTTCGCCAGCGCAGAGCAGGGCGGTGTGACCTACCGCATAGTCTCGC AGCGCCTCCAAACCGCCGCTGGGGAGCTGGTCGTGCGTTTGGCAGATGGG TCCGATCCGCGCCAACAGTGGGTCAAACTGGTGCTGCTCAAGGTCTTGTT GCCCAATCTGGTGCTGATGGTGCTGGGGGTGTTTGTGGTCAATTGGGCGG TCAGACAGGCGCTGCGTCCCTTGCTGGACCTGAAGGAGGCGGTCGAGCAG CGCTCGCCGAGCGACTTGAGTGCGATGGATGTGCAGGCCTCGCCCGAAGA GGTGCGCCCGCTGGTGCAGTCGCTGAACCGCTTGTTCGGTCTGGTCAACG CCCAGGCTGAGAGCCAGCGCCGCTTTGTGACCGACGCCGCGCATCAACTG CGCACGCCGCTGGCGGGCCTGCAGGCGCAGGTCGAGGCCTGGGCGCAGGC GGCCAGCATGCCCGTAGCCACTTGTTCATCCTGCGGAAAATTTATACAAA ACCAGCCTCTAGCCCCCGTGAATAAAGTGCAAGCAGCTATAAATATAGGA GTAGAGCAAATCAGGCGCCTGCGCGATGCCACCCGCCGTACCTCGCAATT GGCCAATCAACTGCTGGCCTTGTCGCGTGCCGACGCCCACGGTCTGGACC AACAGCCAGTGCAAACCGTCGATTTGAAAGAGCTGTGCGAAACCCTGCTG GAGGCGCACCTGGATGCCGCCACGGCCAAGCAGATCGATTTGGGGCTGGA TGTGCAAGCCGTGCAGGTGGCGGGTCACGCGTGGTTGTTGCGCGAGCTGC TCGGCAACCTGACGGACAACGCGCTGAAATACACACCGGCGGGCGGGGTC GTCACGCTGCGCTGTGGTCGTATGCCCGATGGCGGCGCCGCATTTCTGGA GGTTGAAGATAACGGCCCGGGTGTGCCGGTGGAGGAACGCCAGCGTGTCC TGGCGCGCTTTTACCGTATGCCGGGCACGGCCAGCCAAGGCAATGGCCTG GGCCTGGCGATCGTTGACGAGATTGCCCGGGCGCACCACGGTCTGCTGGT TGTCGGCAACGCCCGGGAGGGGCGCGGTGCCCGCTTTACCCTGGTGTTTC CGGTCTGA >Rfer_1526 diguanylate cyclase with PAS/PAC sensor ATGGGTCGTTGGCATCTCACCATGAAGCACGCGATTCACTGGAATCTTTG GAGTCCCTTCATCCGCAACGCTTTGTTGATGGCCGGCCTGATCAGTGCCG GTCTGGCGGTCTGGTCCCACTATGGGTGGATGGCGCTGGGTGGTCTGGCG GCCCTGGCCCTGATCGTGTGGCAAGGCACACGCTTATTCATGACGCGGCG CAGGCTGACGGAACAGTATCGTTTGGTGCTGTTGCAAAAGAAACGGCTCA GAGAAAGTGAATTCCGCTGGAAATTTGCCATTGAAGGCTCGGGGGACGGC CTGTGGGACTGGAACGTGGCCGACGGGAGCGTCTACTTCAGCGCGCAATA CAAACAAATGCTCGGTCTGACGGTTGATGAGATGGATCAACGCTTGCAGG AGTGGGAGACGCGCGTTCACCCAGATGACAAGGCCGGGAGCCTGATGGCG CTGCAATCCCACCTTGACGGACAGAGCCCGGTGTATGCCGCCCAATACCG CATGCGCTGCAAGGACGGCAGCTACAAGTGGATTCTCGACCGTGGCATGG TGGTCAGCCGCAGTGATGCGGGCAAACCCTTGCGCATGATTGGCATCCAT ACCGACATCACCGTGCACAAGCAAGCAGAGGAAAAACTTCAACTCGCCGC CAGCGTTTTCACCCATGCACTCGAAGGCATCATGATCACCGATGCGCAGG GTCTGATCATCGACGTGAACCAGTCTTTCAGTCGCATCACCGGCTACGAG CGTGACGAGGTGTTGGGCCGCAACCCGCATCTTTTGAGCTCCGGTCGGCA GAGCCAGGCCTTTTACGCCGCCATGTGGCGTGATCTGCAGGAAGAGGGGT GCTGGTATGGTGAAGTCTGGAACCGGCGCAAAAGTGGCGAGGTCTATGCC CATCTGCAAAACATCAGCGCGGTGCGCGATGCCCAGGGCCAGACCCGGCA GTACGTCTCGCTGTTTTCCGACAACACCGCGCTCAAGGCGCACCAGCAGC AACTCCAGCACCTGGCCCACTTTGATGCACTGACCGACCTGCCCAACCGC CTGTTGCTGGCCGATCGCCTGCACCAGGGCATGGTGCAGGTGCAGCGGCG CGGACAAATGCTGGCGCTGGCTTTTGTTGACCTGGACGGTTTCAAGCTGA TCAACGACAGCCATGGACATGAAGCGGGCGACCACCTGCTGATGACGGTG GCGACCCGCATGAAGCAAGCCCTGCGCGAAGGGGACACCCTGGCCCGCTT GGGCGGCGACGAGTTTGTCGCCGTGATGTTCGATCTGGCAGACGAGGCGG CCTGCAAGCCGATGCTGCACCGCCTGCTGGCCGCCATCGCCCAGCCGGCG CAATTTGGGGGGCACACGCTGCAGGTTTCAGGCAGTCTGGGCGTGACCTT CTATCCGCAGGTGCAGGAACTGGACGCCGATCAGTTGCTGCGCCAGGCCG ATCAGGCCATGTACCAGGCCAAGCTGGCAGGCAAGAACCGCTACCGGTTC TTCGGGGTCGAATAA >Rfer_1135 two component transcriptional regulator, LuxR family ATGCATAAGGAAACTGTGTTCATAGTCGATGATGATGCATCGATTCGAGA TTCGTTATCACTCTTGTTGAGTCTGCGCGGATTTGCAACTGCGCTGTTTG CCAATGCCGAGGACTTTTTGGCGGCGCTTCAGCCCGATTGGCGAGGCTGT GTGGTGGTTGACATCCGAATGCCCGGCATGTCGGGGCTAGAGCTTCAAAG GTGTCTGCGAGAGCGCGGTCCGAGTTTGCCAGTCATTGTCATAACAGCGC ACGGAGACGTCGCCGCGGCCCGACAGGCGTTTCTGGCAGATGCCGTGGAC TTTATTGAAAAACCTTTTGACGGCAAGCAACTTCTGGGTGCGATCGAGAA CGCCCTGTCGGGCTTTCGCGCCCTTGACACTGCACAGGCTAGAGCTGCTT TCACCAAACCAACGCTTGGGCAACTCTCGATACGCGAGCGTGAAGTGATG ACATTGATGGTTAAGGGTCTTCACAACCGTCGCATCGCTGAGACGCTTGG TATCAGTCCCAGAACTGTTGAGGTCCACAAGGCACGGGTGATGGAAAAAC TCGGCGCGCAAAACATTGTCGATCTGGTGCGATTGGTTGATAAGGGCTTG ACCTGA >Rfer_4056 protein of unknown function RIO1 ATGTTTTTGTTCCCGGCGTGCAGTATAGCGACGGCTGACGCGTCACGACC CGGCGCCACACAGTGCAAAATACCGTTCATGAAACCACCCGCAAGACTGC AATCGCTCATCGAAGAAGGCCTGATCGACACCGTGGTGCGCCAGCTGATG AGTGGCAAGGAAGCCACCGTTTACGTGGTGCGCCGCGCCAATGAAACATG GTGCGCCAAAATCTACAAAGAAGCGACCCAGCGCAGCTTTCGCCAGGCGG TGGACTACACCGAAAACCGCAAGGTCAAGAATTCGCGCCAGGCCCGCGCC ATGGCCAAGGGCACGCGCTTTGGCCGCGAGGCGGCCGAGGCAGCCTGGCA AAGCGCCGAGGTGGATGCGTTGTACCGGCTGGCCGACGCCGGGGTGCGTG TGCCCAAGCCGCACAATTTTATTGAAGGCGTGCTGCTGATGGAACTGGTG ACCGACGCCGCCGGCGACGCGGCGCCGCGCCTGAACGATGTCACGCTTGA GCCCGCGCAGGCGCGCACGCACCACGCCACGCTGCTGCTTGAAGTGGTGC GCATGCTGTGCGCCGGTGTGGTGCACGGCGATTTGTCTGAATTCAACATT CTGCTGGGCGTGGATGGCCCGGTCATCATTGACCTGCCGCAGGCGGTGGA CGCGGCGGGCAACCAGCATGCCCAGCGCATGCTGCTGCGCGATGTGAACA ACCTGCGCAGCTTCTTCGGCCAGTTCGCACCCGAACTGCTGCAGACCGAT TACGGGCATGAGATCTGGGATCTGTACCAGCGTGGTCTGCTGAGCCCCGA GGTGACGCTCAGCGGGCGCTTCACGCACAAAAAAGGCGCCGTGAATGTGA GCGGCGTGCTGCGCGAGATTGGCGACGCCCAGGCCGAGGAGGCGGCGCGC CGCCTGCGCCAGCAGTTGCCGCGCTGA >Rfer_3511 transcriptional regulator, Crp/Fnr family ATGTCTACTCACATCAATCTCAAGTCTGATTTGGCCGCGTTGACTGTCGC AGGAGGCTGGTTCGCCTCCATACCACAGGCATTGCGGGAAGCGCTATTGG TCAATGCTGAAATCCGAACCATTGCAGCGGGCCAGCGCCTGTTTGCGCGA GGTGACGCACCTGACGGGATTTACTGCGTATTGACAGGTGTTGTCCGGGT GACGGGCATTACTGAAAATGGCCAGGAAGCCATCTTGGCCATGCTTGAAT CGCCACAATGGTTTGGTGAGATTGCCTTGTTTGACAACGAGCCACGAACC CATGACGCATGGGCAGAGTCAGATGCGAAATTGCTCCGGGTTTCACAACG AGCACTGGAGAAAATGTTGTCAGAGCGACCCGATGACTGGCGGCATTTTG GCCGTCTGCTGACACAGAAGTTACGCTCCGTCTTCGTTGCCATGGAGGAC ATCTTTCTCTTGCCACCTACTGCCCGACTGGCAAGAAGACTGTTGAGCAT GGCCAAAGGCTACGGTGCCTGGACTGACCATACCAGCCGCGTGATTTCTA TCTCGCAGGAACAGCTCGGACTGATGTTGTCGCTGTCCCGCCAGACCGTC AATCAATCTCTAAGGGAGCTGGAAGACGCGGGATCCATCCACCGCCATCG AGGGTCCATCGAGATGGTGGACTTGCGCAAGCTCGAAGCGGCAGGCAGAT GA >Rfer_0401 UspA ATGAAAATTCTTCTTGCCGTCGACGGCAGTGCCTACACCAAGAAAATGCT GGCTTACCTGACCACGCATGATGAGCTATTTAGCCCGGGCAACGAGTACT TCGTGCTCACGGTTCAGCCGGGAATACCGGCGCGTGCACGCGCCGCCGTG GGCAAGCAAGTCATGGACAAGTACTATATGGACGAAGCCGAACGGGTGCT CGCACCCGTGGCCAAGTTTTTGCTGCGCCATGGCATCGATGCCAAGAGCG ACTGGAAGATCGGCCACGCCGGTGAAACCATTGCCCAGTTCGCCGACAAA GGCAAGTTCGACATGATCATCATGGGTTCACATGGCCACGGCACATTGGT CAACCTGGTGATGGGCTCGGTGGCGACCGAGGTGCTGGCACATTGCACGG TACCGGTGCTGCTGGTGCGCTGA >Rfer_0566 response regulator receiver domain protein ATGTCTTTAATACTCGCTGTTGACGACTCGCCGTCCATGCGCAAGATGGT GTCGTTTACTTTAACCGGGGCTGGCTACCAGGTGGTGGAAGCGGTTGATG GTGTAGATGCCTACGAAAAAGCGCAGGCGCAATCATTTGATCTGGTTCTG ACAGATCAGAATATGCCCCGGCTTGATGGACTCGGGTTGACCCGTAAGCT CAGGGATCATCCGCAGTTCAAAACCGTTCCAATCCTGGTGTTGACTACGG AGTCGAGTGATTTGATGAAGCAGGCCGGGCGGGCCGCTGGTGCCACCGGT TGGTTGGTCAAGCCGTTTGACCCGGCTCGATTGCTTGAGGTCATTAAAAA AGTGATCAAGTAA >Rfer_1928 two component transcriptional regulator, LuxR family ATGGCTCAAGCCACAACCATCCTCGTGGTGGAGGATGCGTTGGGCGACTT TGGTTTGATCAAATCCTGTCTGCAACAAGCCGGATTCTGCCGAGACGACC ATGAGCCTTCTCTGATATGGGCAAAATCTCTGGCGCAAGGTATTGCGCAA GCGCGTCAGGTCAGGCCCGACGTCATTCTGCTCAAGACTTCCTTGCCTGA TTCATCCGGGATGTCCACCGTGGTGGCGATGAACGCTGCCTTACCCAATG TGCCCATCATTGTGCTCAACGGCGTCGATGACGATAACTTTGCCATTGCC GCCCTCGAGGCCGGTGCGCAGGACTATTTGATCAGAGGCCAGTTTGATTA CAAAGCCTTGGGACGCACCATGCGCAACGCGCTGGTGCGTGCGAAACTTG AGTCGCGTTTGCGACTGTTTGAAGTTGCCCTGGATTCGGCTGCGAATGGC ATTGTGATCACCGACGTCCAGGGGAAAATTGAGTGGGCCAACCTGGCCTT CACTCAGATGACCGGCTATTGTGTTGAGGAGGCGCTCGGCTGCAATCCGA GCCAGTTGGTGAGTTCCGGCAAGCATGATGGCGCGTTTTACCGGCACATG TGGGCGACCATCCTCTCGGGGCAGGTCTGGCGCGGCGAACTCATCAACCG GCGCAAGGACGGCTCCTTCTATGACGAGGCCATGGCGATTGCGCCAGTGA CTGCGAGCGACGGTTCGATTCGTAACTTTGTTGCCATCAAGCAAGACATC ACCGAAAGCAAGGCCGCCGAGCTGCTGATTCAGAAAAGCGAGCAGCAGTT GGAATTGGCGCTGGCCGGCTCCGGCCTGGGTCTGTGGGACTGGCATGTCG GCAGTGGCGAGTTTGCGACCAGTGCGCGCTGGTGTGCCATGCTGGGCTAC GGCCAGGATGAGATCGAACCTAACATCCGCAGCCTGGAGAAGCTGGTGCA CCCGAAGGATTGGCCACTGGTCTGTGCCGCGCGGGACGCACACTTGAGCG GCGAAACGCGCGCTTATGAATCCGAACACCGGATGCGCCACAAAGACGGC CATTGGGTCTGGGTGCTGGAACGGGGCAAGGTGGTTGTCCGCGACGCCGA CGGGGGCCCCTTGCGTGCTGCCGGTACGCAGCTCGATATCAGCGACAACA AGCGTCTCAATCAGGAGGGTTCTGAGTTGCTGCGGCGCATTGAGTCGCTG ATGCGTGAGGTCAGCAAGCCGCCTGCACTTGTCGAGCGCGAGCGGTCAGG TGAGTTGGATAGGTCGGCGCGCATTAGCGCCCGTCAACGTCAGGTCCTTG AGCTCGTCGCCATGGGGTGCACATCCGCACAAATCGCAGAGAAATTGCAA ATCTCGCCTGCCACCGTGGTGACCCACCGACGCGATCTGATGGGCAAACT CGATTTGCACACTGTTGCCGAACTGACACGCTATGCGATGCAGAGCAAGC TGGGTTCAGAATAG >Rfer_2629 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) GTGAATCCGGCGGCCTGGGGCCTCTTGATTGATGGTTTGATCGAGGCCGT CTGGCTGGTTGATCCGGTGAGTTTGCGCATCCTCGCGGTCAATCACGCAG CGGCCGACTTGTTGGGTTTGAAGGCAGAGGATTTGGTGGGCAAGCCCGCT ATAGAGTTGACTGTTACGCCAGAAGACCAGTTCTTTTGGGAGGACATCGC CGCTGGTTTGGTTGATGGCATTCACTCGGAAACCCTGTTGCGTGGTGCCG ATGGCATGGCCGTTCCGGTGGAACGCCGTGTCAGCCGGGTTTGGCCCGAA ACGGGGCGCGCGGTGTATGTGGTGGGCATTCGCGATCTGCGCCAGCAGCG CCGCACCGAAGATGAACTTGAAAGCTTGGTGGCAGAGCTGCGGGCCACAC TGGAATCAACTGCCGATGGCATTCTGGTCACCGATCGCAGTGGCGACATC CGCAACTACAACCGGCATTTTGCCGCCATGTGGGATGTGCCCGAAGAGCT GCTTTTGAATCCCAATGACCGGGCCTTGCATGGCCATCTGGCCTCGCGGG TGCTCGACGCTGCGGCATACGAGACGCGCCTGCGGGCGATTGCTGAGAGT CCCTTGCTGGAAACCACTGATGTGTTGATCCTGATCACTGGGCGTCTACT GGAGCGGGTGTCACGGCCGCAATTCAGCAGAGGTCAAGCGACCGGTCGGG TGTTCTCGTTTCGGGACATCACGCAAAGTGTTGATGCCCAGTCCAGACTG CGTCTGGCGGCCAAAGTGTTTGAGTCGAGCGTGGATGCCATCTTCATCAC GGATCCGGATCTGACGATCCTGGCTGTCAATCCGGTTTGTGAGCGTTTGA CAGACACTTCTCAAGCTCAATTGCTGGGGGAATCCGCCAAGAGTCTATTC CAGGATCCGTGTGACCCTGAACTGATGGTTCGTGTGGAACAGGTGCTGCG CGATGAGGGCTTCTGGCGCGGGCAGGTCTGGCTTGACCGTGCCGGTCGTT CTGCTTGTGCCGTTCATCTGTCATGGGTTTTATTGCGTGACGAGGACGGC GCTGTCTTGCACACCATTTGCTTCTTCAAGGACCTGACCGAAGAATTGGC GGCCCAAAAACGCATTGAGCAACTGGCTTACAGCGACGCCCTGACAGGTC TGCCCAATAAATTGTTGTTGTCACAGCGAGTCGGCTTTGCCTTGCGCATG GCCGAGCGCCACGGCTCGCAGTTTGGTGTTTTCTTTCTGGATCTGGATCA CTTCAAGAATATCAATGACTCGATGGGGCATGTGTTTGGCGACCGGGTTC TGGTCGAAGTGGCGGAGCGCATCAAACGTTGTTTGCGCGACGCCGACACC TTGTGTCGGCTCGGTGGCGACGACTTTGTCATTTTTGTGCAGGAAATTGA CGCTCGTGGCGCTGAAATGCTGGCACAGCGCATTCTGGACCTGATGGCGC AGGCTTTTCTGATCGAGGAAACCAGTTTTTCGGTTGGGTGCAGTATTGGT ATCGCACTGTATCCGGCCGATGGCCGCTCGCTCGATGAGTTGATCAAGTG CGCTGATACGGCGATGTATCTGGTCAAGGAGCGCGGTCGAGGCAGTTTCC GTTTTTATCAACCGCAGATGAATGTTGATTTGCTGTCGCGCATGAAAATG GACCATGCCATGCGCCGGGCCATGGAGCAGGGCATGTTCCGGCTGCACTA CCAGCCGCAAATTTCCCTGGCCAACGGCCAGTTGGTGGGCGTGGAGGCGC TGATTCGCTGGTTGGATGGCGAACTGGGCAATGTGTCGCCCGTGTTGTTC ATTCCCCTGGCAGAGGAATCGGGCTTCATCATCACGATTGGCACCTGGGT GCTTAAAGAGGCGGTGCGGCAAGCGGTGCTCTGGCAGAACGCTGGCACGC CGGTCACGGTGTCGGTCAACGTATCGGCACTGCAGTTTCAGCAGACCGAT TTTGTGGAGATTGTGGCGAACGTGCTGAAGGATTCCGGATTGGCACCGTA TCTTCTTGAGCTCGAATTGACAGAGACCATTTTGGTCAGGGATGCCAATG AGACCTTGAACCGTTTGCATGCACTGGCGGCCCTCGGAGTCGCCCTGTCG ATCGATGACTTTGGCACCGGTTATTCGAGCTTGGCTTACCTGAAAAAATT TCCCATCTCCAAGCTCAAGATTGATCGCTCTTTTGTCATGGGCCTGCCCG ACGACGAAGGTGACCGCGCCATCGTGAGTGCGACTATCGGCATGGCGCGC GGACTCAAATTGAAAGTGGTCGCAGAGGGGGTCGAAACCATCGCGCAACG AGACTACCTGGCCGGGCTCAATTGCGAATCTTTTCAAGGTTTTCTGTGTT CCCCCGGACTGCCTGCCGAGGAGTTTGAGCGACTGATGGCGTCATTTCCG CGCGATTAG >Rfer_2788 periplasmic sensor signal transduction histidine kinase ATGCTGCAGAAATTTTCGTTCCGGCAACTGCTGGTGATCGCTTTTTTGCT GATTGCCGCTTTGCTGGGTGCGGCCTCGTTGCGCGCCTTGTTCACGCTGG AAGAACTCACGCTGCAAAGCCGCGACGGCGCGTCCCAATCGCTTGAACTC AGCCGGCTCGCCCAGTCACTGAGCGAGCTCAGCGTTTCCATGGAGCGCAC ATCGCGCCAGTCGGTGGTGCTGGACGACCGCGTCTTGCGCGTGCGCTTTT CCGACCAGGCGCGCGAGGCCGCCACCCTCCTGGCCAGCCTGACAGCACAA GGCCTGCCCAGCGGGCTCAAGCAGCAGTGGCAAGCGCACCTGCAAGCTGC TGGCGACCTGTTGACCGGCGCACCCGATACCGCGCTGGAGCGGGAACGCC AGATAGCGCAGGAGTTTCGCTCACTCGATCATGTCAATTCGGCCATCGCG GTGCAGGTGCAAAAGACCATCCAGCAGCGCAACCAGGCGCTGGAAGCCAA GCTCGAAGACAGCCGAAGTCACCTGGCGCAGCAAGTCACCTGGGCCATCG TGCTGGCGGTCGCCATGGCGCTGGCTTTCGGCATCTGGTTCACGGTGCCC CTGAAGCGCCTGGAACATGCCATCGTCGGTCTGGGCGAAAACCGGCTCGA TCAGGTGATTGCCATTCGGGGTCCGGCCGACCTGGCCATGGTGGGGCAGC GGCTGAACTGGCTGCGCCTTCGGCTGGTCGAGCTCGACGCCGACAAATCA CGTTTTTTGCGCCATATTTCCCATGAACTCAAGACCCCGCTGGCATCGCT GCGTGAAGGCGTCTCCCTGCTGGAGGACGGCGTGGCCGGCGAACTGAGCC CAGAGCAGCGAGAAATCGCGCAAATCCTGCGCCACAACGCCGGTGTCTTG CAGGGCCAGATTGAAGACCTGCTGCGCTTCAATACCGCGGCGTTTGAGGC CCGCCAGTTGCACCGCCGGACGACCAACCTGCTGGAGCTGGTTGAAGCCC AGGTTGACGCGCAGCGTCTGCAATGGCGTGCCCGTGAGCTGTCGGTCATC GTCGTCGGCAAGCCGATCCTGGTGGAGCTGGACCCCGAAAAAATCGGCAC GGTGCTGGCCAACCTCTTGTCCAATGCCATCCGCTACTCACCGCTGAAAG GCGACATCCGCCTGGAGCTGAGTAAACTGCCGGGCCTGGTCCGCATCGAC ATTCACGACCAGGGTGTGGGCGTCGCCCTGGCTGATCGCGAGCGGATTTT CGAGCCGTTTTACCGTGGCGAGCGCCAACCCAGCGACGTGGTGCGGGGCA GCGGCATTGGCCTGTCCATCGTGCACGAATATATTGCAGCACACGGCGGC CGCATCGAGCTGCTGCCGGACCAAGGCGGCGCCCATTTCAGAATCGAGTT TCCCCATGTTTTCAAATCCTGA >Rfer_2741 two component, sigma54 specific, transcriptional regulator, Fis family ATGAGTGCCAGAATATTAGTTGTTGACGACGAAGAGATTGTTATAAGAAG TTGCGTGCGCATACTCAACGATGACCTGTATACCGTGGACTCTGCCCCGG GCGGCTTTGAGGCCTTGAAAAAAGTCGATGAGACAGCCTACGATATTCTC ATTCTCGACGTCATGATGCCCAAGATGGACGGTCTTGAGGTCTTGCAACA CGTGAAGGAAAGGCATCCGGAGATCGACGTCATCATGATGACCGGGTTGT CCGAGATTCAAACGGCTGTCAAGGCCATGAAGCTGGGTGCATTTGACTAC CTGTCAAAGCCCTTCGATCCAGATGAACTCAAGCTTGTTGTCAATCGCGC CCTGGAGCGGCGGCAACTGATGCAAGAGAATCGCAAGCTCAAGACCGAAG TCAGCTCAAAATATCGTTTTGAGAACATCATCGGCTCGAGTCCGCCGATG CAGGCAGTCTTTGGCCTGATCGCCAAGTGTGCGCCGACAAACAGCACCGT GCTGATCACCGGAGAAAGTGGCACCGGCAAGGAAATGATTGCGCGCGCTA TTCATTACAACAGCTTGCGCAAGGATCAGCCATTTGTCACCGTTGACTGC AACACGCTGAGTGAGAACCTCCTGGAGAGTGAATTGTTCGGGCACACCAA GGGATCCTTTACCGGGGCCGTGGCCAACAAACGCGGCATGTTCGATGTCG CCAACAATGGCACACTGTTCCTCGACGAATTCGGCAATATCCCGCTGTCA ACCCAAGCCAAATTGTTGCGGGTGATTCAGGAGCGTGAGTTCAGGCCGGT TGGCACGACCACCAACCAGAAGACCAATGTCCGGCTCATTACCGCGACCA ACAAGGATCTCAAGGCGATGGTGGCTGAAGGAACGTTCCGTGAGGATCTT TACTACCGCATCAACGTCTTCCCAATTCACTCGCCAGCCTTGCGCGAGCG CCGTGACGATATCCCCGCGCTGGCCTTTCACTTCCTGAAGATTTTTTGCA GTGAACTGGGAAAGCCCGTGTCAGAGATTTCGGAAGGAGCGATGAGTCTG CTGATGAACTATGGCTGGCCAGGTAATGTGCGCGAACTTGAAAACACCAT GCAGCGGGCAGTGATCCTGTCGTCTGACGGCATCATCCGTCAGGCGCATC TGGCTAGCATAATTGACAATTCTCCCCGGCTCGATCTTGACGTGCCTCGT ACCAGCGATGAACTCAAGAGAATTAAAAAAATCGCCAGAGAAAAATCGGT TGAGGAAGTTGAGAAGCTGTTCGTCCAGGAAACACTAAAAAGAAACGCGT CGAACGTGACCCGCAGTGCTGAAGAAACCGGTATGCAGCGCACCAATTTT CAGGCCTTGATGAAGAAGTACAACATTCGGGTCCGGGATACCGAATACGA CGACGGCGAACCCGAACCCATTTGA >Rfer_1768 multi-sensor hybrid histidine kinase ATGAATACCAGCGGGAAAATACAAGGCAATGACGACGGCAAGGCAAGCGA TCGATCCGTGAGTCTGCTCCCAAACCAGGAGTTGCGACACAAGCATCCAG CCTGGAATAGGCTGCTGAACCTGCTGGATCGGTTCTACGCAAAGCTGGCG CATTCCGAACACAAGGGACTGTACCGTTATCTGCTGACGCTTGTTCTCTC GGTTGTTGCTCTATTTGCCCGCATGGTCATTGCACCGGAAGATGCCGGAC TGCAATTCATCACCTTTTTTCCCGCTGTCGCAATCTCCGCGGTGCTTTTT GGCACCGGGCCAGGGCTATTCACCACCTTCATCGGCGCCACGATGGGCAC CTATTTCTTCTTCCCCCCTTACGAGGCGTTTGTATTCGAATTTCAACATC ACACACTGATATCCGTGGTGATTTTTTGCGCCGATGGATTGATCGTGAGT CTCTCGATCGGCGCGATGCGCCGCTATTTTTCCAATTACGTCATCACGGT TGCCAAGCTCGAAACAGCACTGGAGCAGAGTCGGCACAATGAAGCCGAAT TGACGTATCAAAAATACGCATTGGATCAACATGCGATTGTTGCTGCCACT GACGTACGCGGCACAATTACTTATGTCAATGATCTGTTCTGCGCGATAAG CCAGTATTCCCGTGACGAACTGCTTGGACATAACCATCGGCTGCTCAATT CCGGCGCACATCCAAAAGAATTTTTCGAGGCCATGTATCGCACCATCTCC AGCGGCGAGGTCTGGAAAGGTGACATCTGCAACCGCGCCAAGGATGGCTC CCTGTATTGGGTGTCGACCACCATCGTGCCCTATGTCAATGACAGCGGTA AACCAATCAGGTATGTTGCGATCCGCGCCGACATCACCGAGCGCAAACGT GCCAAGGAAGCCGCCCAGGCTGCCACACTCGCCAAGTCGCAATTCCTGGC CAACATGAGCCACGAGATTCGCACCCCGATGAACGCCGTCCTGGGGTTGA CCCGCATGGTGCTGGAGTCGGACCTGAAGCCGGAGCAACGGGAGCAGCTC ATCAAGGTCAGCAAGTCCGGCCGGGCCTTGGTGCGCATCATCAACGACAT CCTGGACTTTTCGAGAATCGAGGCCGGGCGCTTGGCGATCGAGCGGATCC CCCTGCGCGTGGAGGCGGTGCTCCTGGAAGTCGCCGACCTGTTCAGCGCC CAGGCCGAAGAGAAGGGGCTGGAACTGTTCCTCGACATCGAACCCGAGAC CCCGCTGCAGGTGATAGGCGACCCGCTACGCCTGACCCAGGTGCTCAATA ATCTGGTCGGCAACGCCATCAAGTTCACCGATCACGGCGAGATTCATATC GGCGTGCGGGTCGCGCACTATGGCGATGCCACGCTGACCCTGTGCATCAA CGTGCGCGATACCGGCATCGGCATGGCACCGGAACAGATCGGCGTCCTGT TCCAATCCTTCACACAGGCCGATTCCAGCACGACGCGCAACTACGGCGGC AGCGGGCTTGGGCTGACCATCGCCAAGAAGCTGGTGGAGTTGATGGGCGG CCAGATCACGCTGGACAGCGCGGTCGGCCAGGGGACGAACGTCAGCTTCA GCGTCGCAGTCGGCATGGCGCCGGACGACTTTCGCCGCGTCACCCACATG GGTCAGGACTTGCAGCAGATGCACGGCAAGCGCGTGCTGGTGGTGGACGA CCAGGCGACGTCGCGCCAGATCCTGTCGCGCCTGCTGCAGGCCTGGGGGA TGGAAGCGACCGAGGCAGAAAGCGGACCGCAAGCGCTGGCCCGGGTCGCC GAGGCGAACCGGGCGGGACGGCCGTTCCATGCCGTATTGCTGGATTGGCG CATGCCCGGCATGAGCGGCCTGGAGGTGGCGACCGCGCTGAAGGCACAGG ACGAAGCGAAGGGACTCCCGACACCTTTGCAGGTGTTGATGGTGACCGCC TACGACAAACAATCGCTGCTGCAAGAACCCGAAGCCGCCAACATCGACGG GGTTCTCACCAAACCGGTGGTGCCTTCCTACTTGTTCGATGCCTTGCTGC AGGGCGAACCCCGCCACCCGGATGCATCGGATGAACTTGTTGCCCAGAGA TTCGATGGTGTTCGCGTGTTGTTGGTCGAGGACAATGACCTTAACCAGGA GGTCGCATCCAGTTTCTTGAGAAAACGCGGCGTGTCCGTTACCGTTGCCT GGCATGGTGGCGAAGCCGTGGAACTGATTCAACACCAGCAGTTTGACCTC GTGTTGATGGATCTGCACATGCCGGTTATGGGCGGTATCGAAGCCGCACG TCGAATTCGCGAACTGCCGCAGGGGAAAAACCTGCCGATCGTGGCCATGA CGGCGGCGGTCATGGAAGAAGACAGGGCGCGGTGTAGAGCAGCCGGCATG AATGGCTTCGTCGCCAAACCGGTGGAGCCCGAAGATCTGGCGCGGGTGCT CGTCATGTACACCCGGCCGGGGACGCAGACGCCGCCCGCCACCACGCCGA CCATTCAGGCGGGCGAGCCGGTGCTCGATCTGGTGAAAGGCCTGCGCCGC CTGGACGGCGACCGTGCACTGCAGCAACGCCTGCTGCTGGGGTTCGTTGA GCGCCATCACGACATCGTCGGGCGCCTGGACGCACTGCTGGCGGAAAAAA ACACGACCGAAGCCGTCGATTTGATCCATACCCTCAAAGGCGTTGCCGCC AATCTGGGCGCGGTGGCGCTGGCCGAGGCCAGCCGCCGCTTGATCGAAGA ACTGAGGTCGGCGACGCCACTGGCCTCTCGCTTCGCTTTCCATACAACCC TGGTCGAGACGCTCACGCAGATGCAGCAACATATCGCCGGCCACGTCCAA ACCGACCTGGCCGAGGCGGCGGCGGTAGAGCCTGTCTCGCTGGAACACAC CTTGCTGGCGCTGGAGCCCTTCATCGTCGGCCAGGAAGTGATTCCCGACG CCTTGCTGGTCGCCTTGCAGCGGATTAGCACCGCCGATTTGCCATATTCA CCGCTGGCGCGGCAGTTGCGGCATCACCTTGACAACTTCGAACATGGCGA GGTCCTGGAGGCGTTCAAGCTGTTGCGGGTAGAACAGGCGGTACAAGGAT GA >Rfer_2855 periplasmic sensor signal transduction histidine kinase GTGAAACCAATCGCTCTCAGCGCCAAACCCCGACGGGTCAAGGCCACCTT CATCTGGCCGTTCGCGATCGTGCTCACCTTTATTCTGGCAGCATTCGTGG CGACCGCCTATTACCTGCAGGTGCAGGTTCGCGACCGGGCGCTGGCTGCC CGCGTGGCGGCTGTGGCGAAATTGGTGGACCAAAAGCTCAGCAAGGATAC AAGTCTGATGCAGGCTGTGCTGCGCACGATGATGGGCAATCGCGCCATCG AGGCGGCTTTCGCCAGCCGTGACCGCGACGCGCTGGTGCGCGAAGCGGGA CCTCTGTTTGAAACCTTGCGCGCTGACCATCGCATCACGCACCTCTACTT CAACGGTCCTGATCTGGTCAACGTGCTGCGCCTGCATAGCCCTGGCCAGT TTGGTGATCTGATTGACCGGGAAACCTCGATCAAGGCGCGGGACCAGGGT ATTGCCGTGCATGGCATTGAGCTGGGGCCGCTCGGGACGCTGACCTTGCG GCTGGTCGTGCCATGGCGCAGCCAGGACCGCCTGCTGGGCTACCTCGAGA TTGGCGAAGAGGTTGGCTATCTGGTGGACGAAATCCGCGACAGCCTGTCG GTCGACTTGCTGGTGATGGTGGACAAGGATCTGATCCTGCCCCAACAATG GCAGCATGGCTTGGCATTGTTCAATCGCCAAGGGAGTTGGGACCGGTTTG GCGCCCAGGTGCTGGTGGCACAGACAGCCAGTCAAGTGCCTGCCGCCCTG AACGACGGCGTTCTAGCCAGCCTGCGAGCGGGGCGTACCGCGGTGTTCGA AGACGGCCAGCGGATATTGCACCTGGCCATGTTGCCGATGGCGGATGCCG GCGGGCGCCGCATCAGCGACCTGGTGGTGATGCTCGACATTTCCGGGCTG CAGAAGACCTTTCAGATGTCGATCCTGGCGGCGACCTTGTTGAGCTTGGC GGCCGGTGTTGGTGTGTTGGGATCGTTCTACTTTGCCCTGGACCGGGTCG AGCGTGACTACCAGCGCCAGCACGATCTGGAGCACCAGTTGCTGCGCGTG GGCAGCGAACACCAGCGCATGTTGCAAATTGAAAAGCTATCGGCCTTGGG CACGATGGTGGGCGAGATTGCGCACCAACTCAACAACCCGCTGGTGGGAG TGGTCAACTTGGCGCAACTGGCCAAGCGAGAGGCGGATGACCCCCAGCGC ACGCGTGAGCTGCTGACCGAGATTCATCGCGCAGGTGCGGACTGCCATGC GCTGATTCAGTCCATGTTGCGCTTTGCCAAGGTGTCAAGTTGTGAGATCC GCCCCACGTCGATGGCGCAGGTGATCGAGGAGACGGTGCTGCTGTTTCGT CAGACTGAGCGCCGACAGTTGCCGGTGGAACTGCGCTTGCCCGCGCAGGC GGTGGTCCTCACGGTGGATCCGATCCTGATCCGGCACGCGCTTTTCAATC TTCTGCTCAATGCGGCTCAAGCCACCGTCGGAGACGGTGCGATTGTCATT GCGCTTGACCGGGCCGTGCATCCGGACAGTGGCGCGCCGGGATGGCGGCT CTCGGTGACCGACCAAGGCCGGGGTATTGCCCCGGACATCCTGGAGAAGA TATTTTTGCCTTTCTTTACGACCCGCCGTGACGGCACCGGCTTGGGTCTG CCGGTCGTCCAACACGTGGCGCTGCTGCACGGCGGGTATGTCAGCGCCAG CGGGCAGCCTGGTGGTGGCACGCAATTTGCAATCTGGTTGCCGGAAGACC ATAAGTTATGGAAAGACAACACATCGGATCAGCTTGAACATGCTGCCTAA >Rfer_3941 protein serine/threonine phosphatases ATGAATTACACCTTCTGTACACAGACTGACCCGGGCCGGGTCCGGGAAAA CAACGAAGATTCCGTGGCTTTTGATGCAGCCACAAACCTGGGTGTTTTGG CGGATGGCATGGGAGGTTACAACGCTGGTGAGATTGCCAGTGGCATGGCG ACCGCCTATATCAAGTCCGAATTGGCGCGCTGGTTATCCGAGGCCAGCCC GCAGGCCAACGCCGGGGAAGTCAGGCGCGCCATTGAGATTTGTGTCGACA ATGCCAACCGCTCCATTTTTGCTGCCTCCTGCTCCAACCGGCATTATGCG GGTATGGGAACCACCCTGGTGGTCGGCGTTTTTCTGGACAACCGCTTGTT GTTAGGGCATGTCGGAGATTCCCGCTGTTATCGCTGGCGTGGCAACACCC TGCTGCAGATCACCAAGGACCATTCGCTGCTGCAGGAGCAAATTGACGCC GGATTGTTAACGCCCGAGCAGGCGGCGACAGCGCCCAACAAAAACCTGGT CACCCGGGCACTGGGCGTGGACAATGTGGTTTCACTGGAACTCAACGAGC ATCGCGTCGAGCCTGGTGATATTTATTTGATGTGTTCCGATGGACTTTCT GACATGATGCCAGACGCCGCGATTGCGGAAGTCCTGCAACATGGCATATC ACTGCTGCCAATGGTGCAAGAGCTGGTAACCTTGGCCAACCAGAATGGCG GACGCGATAACATCACGGTATTGTTGATTCAAGCTTCAGCCAGCCCGGAC AAGCGCGGATTGATGGCCAGATTGCTTGGTAAATAG >Rfer_2773 conserved hypothetical protein ATGATTTCGCTCGGGCGTCTGATGAGTACGCCGGGTGTCAACAGGAGGAC ATTGATTTTGAAAATGTTGCGACTGCCTCGCTCTAAAGTGCAGATCGGCA CACCCCTGCCCTGGAGTGTGCGCGATGAGCAGGGCACATTGTTGCTCTCG AAGGGGCATCTGGTTGAGAGCGAGCATCTGCTGGACCAATTGCTCCTGCG CGGTGCCTACGTGGATGCCGAAGAAGCCCGAGCAGTCGCGCTGGCGGACG CCCCGCAGCGGCCCAAGACGCCTGTGCCGCCGCCCAATATTTTTGGCTTA TGGGACAAAACCACGGATGATTTAAAAAAACTGCTGGTCAGCGTGACACA CCAGGACGACTTCCCTGGCCGCATCGAGCAGTTTGCGCGCCACCTGCTGG AACTGGTTGACTGCAACGCGGACATCGCCATTTATCGATGCGTGCGCCAA GACAACGCCCAGCATTTCTATTTTGGCTATACCCATGCCGTTTATACCGC CATGCTGTGCATTTTGATGGCCCGCCATTTGAAATGGTCCGAGACCCGTT TGATGAGCCTGGTGAAGGCGGCGCTCACCATGAACCAGCCCATTCTTGAT TTACAGGGGCAAATGGCGGGACAGGATGTCCCCATGAAAGACAAACAACG GGCTGCCATTCACACCCATCCGACCCAATGCGTTGAATGGCTTCAAAAAG CCGGGGTCACAGATGCCGACTGGCTGACTGCCATTGCGCAACATCATGAG CGAGCGGATGGAACCGGCTACCCGCTGGGCTCTACCGAGGTCTGCGAGAT GGCGGTCGCACTGCGCGTGGCAGATACCTTCACATCAAGAATAAGTCCGC GTGTCATGCGTCCGGCGCTGTCGCCTCAGGAGGCAGTACGGCAACTGTAT CAAGAGGACAAAGGTGGTCCTCTGTCAACGGCAGTCATCAAGGAGTTGGG CATTTATCCGCCCGGTGATTTCGTGAAACTTGCCTCCGGGGAACTCGGCA TCGTGGTGCAACGCACGGCCAACGCGCGAGCGCCCATTGTGGCCTCCATC ACCGACACGGCCGGTCGCCCGGTACCGCATACCGTGCGCCATGACACGGC GCAACCTGAATTCGCGATCAAAGCCACCGCGTCTGACAAAGTCATGCTGA TGCGTTTGCCGCCCGAGCGGCTATTCGGGTTTTCATTGGCACCGCAGGCG CCGGTGGTGCGGCCCAAACCGGTGCATTAG >Rfer_3548 PAS/PAC sensor hybrid histidine kinase ATGTTAAAAACTGACCCTATCCCTGACTTGCCCAAGGCTGTCGCAGGCAC GCCGGAGGGTCTGACCGAGTTCAGGCGACAGGAGGCCTTGCTCAAAACCG GGGCCTTGCAGAACGCGATTCTCAATAGCGCCAATTTTTCGAGTATTGCC ACCGATGAACGGGGCGTTATTCAGATTTTCAATATTGGCGCCGAGCGCAT GCTGGGCTATGCCGCCGCCGATGTCCTGAACAAGATCACGCCCGCCGATA TCTCCGATCCGCAGGAATTGATCTTGCGTGCCACCGAACTGAGCGCTGAG CTTGAAACCGCCATTGCGCCGGGTTTCGAGGCCCTGGTGTTCAAAGCCTC GCGCGGTATTGAAGACATTTACGAGCTGACCTACATCCGCAAAGACGGCA GCCGTTTTCCGGCCATCGTGTCGGTCACCGCCTTGCGCAATGCGCGCGGC ACCGTCATCGGTTACCTCCTGATCGGCACCGACAACACCGCGCGCAAGCA GGTTGAAGCAGAGCGTCAGCACCTGCTGAAGGAGCAGGAGTGGACCAATC AGCAACTGCATCAGGCCAACCTGACTTTGCGGGAGAGCGAGGAAAAATTC GCCGTGACGCTGCATTCCATTGGGGATGCCGTGATTGCCACCGACGCCGC TGCGCGCGTGACGCTGCTCAATCCCCTGGCCGAGCGGCTCACCGGCTGGA CACAAGCGCAGGCCAGCGGTCGCCCGGTGGACGAGATTTTCACAATCATC AACAAGGAAACCCGGCTCAGCGCCACCGTTCCCGTGGCGGAAACCCTGGC GCACGGCACGATTCAGGGCCTGGCCAATCACACGGTTGTGATTGCACGCG ATGGCAGCGAGTGCGATATTGCCGACAGTTGCGCACCGATTCGCGACCGC GACGGACAGGTGATCGGTGCCGTGCTCGTGTTTCGTGACGTCACCGAGGA ATATGCGGCCCAGCAGGCCCTGCGCGACAGCACGGCCCTGATCCAGACCA TTCTCAATACCGTGGCGGATGGCATCATCACCATTTATGCCCGCGGCGGC ATGATCAAGACCGTGAATCCGGCCGCTGAGCGCATGTTTGGCTATAGCGG GATCGAGCTGGTCGGGCAGAACTTCAGCCTGCTGATTCCCGAATTGGACC AGGATCAGCGCAATGGCTCACTTGAGTACTACAGTGCCAGTGACGAGGCG CGTGCGGCCGGCTTGGGGCGCGAGGTGCTGGGCCGGCGCCAGGATGGCAG TGTTTTCCCGATGGAGATGGCCGTCAGCGAGATGTGGTTGGGCGGCGAGC GCTATTTCACCGGCATTTTGCGCGATACCACCGCGCGCAAACAGGCCGAA GAAGCGCTGCTTCAGGCGGGGGCCTTGCAGAGCGCGATTTTCAACAGCGC CAATTTTTCCAGCATTGCCACTGACGCCAAGGGCGTCATTCAGATTTTCA ACGTCGGCGCCGAGCGCATGCTGGGTTACACGGCGGCAGAGGTGATGAAC AAGGTCACCCCGGCCGACATTTCCGATTCGAAAGAAGTGATTGCGCGGGC CAAGGCACTCAGTCTCGAACTCGGGACCCAGATTGAGCCGGGCTTCGAAG CGCTGGTGTTCAAGGCCTCGCGCGGCATTGAGGACATCTACGAGCTGACC TACATCCGCAAAGACGGCAGCCGCTTCCCGGCGGTGGTGTCGGTCACGGC GCTGCGCGACGCGCAGGGCGTCATCATTGGTTACCTGTTGATCGGTACCG ACAACACGGCGCGCAAGCGCGTCGAAGCCGAGCGGGCGGTGCTCGATCGG GCGCTGCGGGACAAGAATGTCGAACTCGAGAGCGCCCGGCAAGCCGCCGA CAAGGCCAATCTCGCCAAATCAGAGTTTCTGTCGAGCATGAGCCACGAGT TGCGCTCTCCGCTCAATGCGATCCTGGGCTTTGCGCAACTGATGGAGTCG GGTGTGCCGCCGCCCACGGCCACGCAAAAGGCCAGCATCGACCAGATTCT TCATGGCGGCTGGTATCTGCTGGAGTTGATCAACGAGATTCTCGATCTGG CCTTGATCGAGTCCGGCAAGCTGTCGCTGTCGATGGAGCCGATCGCGCTG CCGGACGTGTTGCTTGACTGTCAAGCCATGATCGAACCGCAGGCACAAAA GAGCGACATTCGCATCAGCTTTCCGCAGTTCAACGCCCCTTGCTTTGTGA ATGCCGACCGGACGCGTGTCAAGCAGGTGATCGTGAACCTGATGTCCAAC GCCATCAAGTACAACCGCGTGGGCGGTACGGTCGAAGTGACGTGCAAGAA GGTCGCCGCGCAACGCCTGCGGATCAGTGTGCGCGATTCGGGCGAAGGAC TCTCGGCAGAGAAAGTGACCCAACTGTTTCAGCCGTTCAATCGGCTCGGG CAAGAGGTTGGTTCCGAAGAGGGTACCGGCATCGGCCTGGTGGTGAGCAA GCGGCTGGTCGAATTGATGGGGGGCGAAATTGGCGCGCAAAGTATCGTCG GGACCGGCAGCGTGTTCTGGTTTGAGTTGAATTTGGTGGCGGCACCGCAA TTTGCCGCCGATTCCGATGCCCCGCTGGTGCCGGCGCAGCCGCCCACCGC GCCTGGCGCCGCGCTGCGCACGCTGCTGTACGTGGAAGACAACCGGGCCA ACATGGAGTTGGTCAAGCAGCTTATTGCGCGACGTCCGGATATGCGCCTG TTGAGTGCCACGGATGGCATGCAAGGTATTACGCTGGCGCGCATTCATCT GCCCAAAGTGATTCTGATGGACATCAATCTGCCGGGCATCAGCGGCCTTC AGGCGCTGAAAATCCTGCGTGAAGACCCTGCAACCCGGCACATTCCGGTG GTGGCCATCAGTGCCAATGCGATGCCTCGCGACATTGAGAAAGGCCTGCA GGCCGGGTTCTTGCGCTACCTGACCAAGCCGATCAAAGTCAACGAGTTCA TGGAAGTGCTGGATATGGCGCTGGAAACGGCGCGGACCGGATTGGACAAC GCCGCAATGGAAGAATCCATGTGA >Rfer_2608 diguanylate cyclase ATGAGCGCCATCGACCCCCGCACGGTTCTCCTGCTGACTGGCATCATGGG CGGTTTGATGTCGCTGGTACTGTATTCGCTCAAGCGCAATTACCCGGCCT CCATCGAGGGCCTGGGTGACTGGTCGGCGGCCTTGCTGCTTTTGTTTGCG GGTGGCCTGCTGGTGGCCGGGCGCGGCAAATTGCCGAACGTCGTTTCCAT CTCAGTTTCCAGCTTTTTGCTCTGGTCCGGGCTTTATCTGGCTTACGTTG GCAGCCAGCGCTTCTTTGGCGTCAAGCCTCGCATAGCGCCCTGGATGGCA CTGATCACGGGCTTGGCGCTGGTCCAGCTGTGGTTTTCCGTGGTCGAGCC GAGTTACCACATGCGCCTGGTTCTGACCACCGTGGCGACGGCTTGCCTGT CCGGGGTGCATGCCTGGCTTGTATTCAGGCAGGGTTCAATCACATTTTCC CGGGGACTGGCTGTTGGCGTGCTGGTGTTCCTCTTTGGCGCGCAGGTCAT GCGCCTGGTGACCTCGTTCTCCGCGCCCTTTCCGCTCAATGCCGAATTTT TTGACACCTCAACCCTTCAGCTGACCTACATCACCAGCTTCGCTTTTTCC GTTCTACTGTTCTCCATCAGCGCGGTGCTGATGGCCACCGACCGCTTGCG TATTGAACTGGAGCACTTGGCCAATCACGATTCACTCACCAACGCCCTGA CCCGCCGGCACATGGACGACGCTTGTCGGTCCGAGTTGGAGCGCTGCCGC CGTCATGGCCACAGCATGGCCTTGCTGATCATGGATCTGGATCATTTCAA AGAGATAAATGACATTTATGGCCACCAGGCGGGCGACCAGGCCCTGATCA ACTTTGTGGCCAGAGTCAACGCCTTGTTGCGTGGGCCTGACCAACTGGGA CGCTTTGGCGGCGAAGAGTTTGTGGCGCTTTTGCCGGAGACCTCGCTGGA CGAAGCCATTGCTGTGGCCGAGCGAATTCGCGGCGCCTGCACCCTGGCCG GGCAGGCCCCCGCGTGTACCGTGAGCATTGGCGTCACCACAAACCGAAAG GACAATGACAGCGTAGACACGCTGCTGGCGCGCGCCGACGCTGCGCTGTA CCGCGCCAAGGCCGCCGGACGCAACCGGGTGGAGGTGGCCTGA >Rfer_2766 PAS/PAC sensor hybrid histidine kinase ATGAGGATTTTGTCCAGGCCCAGAATGCCCTCCGTGCTCAAGCCAAAACG CCTTCTGCGCGGTCGCGCAACAGGTCAAAAGCAAACAGTTCTGGCCAGGG GCTATTCCCTGGCAAAGATGGTGGAGGATTTACGCAATTACCAGGCTGAG CTGGAAATTCAAAATAAGGCGCTGCGGTATAGCCAAATCGCTGCCGAAGG CGCTTCGGAGCGGTTTCTTACCCTTTTTTCAAACGTACCGTTGGCGCTGC TGGTGGTGGATGAAAATGGTCTGGTGCTCGAGAGCAATGCCATGGCTTTG CGACTTTTTCGCCCCCTGGAGAGTGATCCGCCACTGAATTTCTTACTGCC GCTGGTGAACAGCGAGTATCTTGACAAGGTCGCACAGGCCTTTGTCAGCG CCAAAATGGTCGGAACCAACGAGACAACAGAAGTCGTTTTTTCGAGCGGC TTCAGCGGTGTTTTCACAGGTGACTTGCATATTGCCCGGATCGAGAATTT TCAGGATGATCTGGCGCAATTCATATGCGCGGTTATTGACCAAAGTCCTT TACTGGCTCAGCGTCAAGCCTTGCAGCTTAGTGCAGCAGAACTGCAGCAG CGCAATGAAGAACTTCAATTGAGCAAAAACAGACTGGCCTCGATCATCAA TTCGTCACTCGACGCCATTATTTGTATCGATCAGAATTACCTCATTACCA TTTTTAATCCTACTGCGGCAGCGTTGTTTCAGTGCCCGTCGTCGCAAGCC CTCGGCAGCCAACTGACACGCTTTCTGCCGGACGCGGTGCAAACACTCAG CTACAACAAGCTCACCACGCATGCGCAATTAGGTGAAATGACGGGCTTGA CGGCAAGCGGCAACAGCGTCTCCATTGAAGTCAGTGTGTCGTTTGAGCTG CACCCGGAGGGTGATACCACGACCATCTTCGCGCGCGACCTTACCAGCCG CAAGAAAATCGAGGCGCACCGCAATGCTTTGGAGTCACAACTGCGGGAGT CGCAAAAAATGCAGGCGGTGGGCACCATGGCGGGCGGGATCGCGCATGAT TTCAACAACATCATTGGTGCCATTCTGGGCAATGTGGAACTCGCCAAACA AGATGCTGGCGCAAGGTCGCCAGCGCTCGTCAGTCTTTCCGAGATTGACA AGGCAGGGCGGCGAGCCCGCGATCTGGTGCGACAAATCTTGACATTCAGT CGCAATGAATCACCTCAGCGGATTCCAATTCAATTGGCTGACGTGGTGCA GGAAACCGTGCATTTGCTCAAGGTTACTCTTCCGCCCCTGGTCGACATGC AGGTGCGCATTGACCCCAGCACCCCGTTGGTGCTGGCCGATGCGACCCAA GTGGAACAAGCCCTACTCAATCTGTGCACCAATGCCATTCATGCGATCGG CCCCCGGCGCGGGACGCTCAGTATCGAACTTGGGCACAAGCTGACGGCTG ACCTGGGTCGGATAGAGCGTCGAGGCGGCGTACGTGGTCAGCACGTCAAA TTGGTGGTTCGTGATACGGGCAGCGGTATCGATGCCCAGACGCTGCAGCG CATTTTTGAACCCTTCTTCACCACCAAACCCGTGGGCCAGGGCACTGGTT TGGGACTGGCGGTTGTTCATGGCATCATGCGCACTCACCAGGGCACTGTG GATGTGAAAAGCACGCCTGACACCGGTAGTGTGTTCACGCTTTATTTCCC GGTCGCCGACCTTGCTGCCTTGCCCGAGACCCCGCATGCTGCAAAATTGT CGGAGCCCCAGTCGGTGCGGGGCGGAGGCAAGCGGGTCATGTACGTTGAC GACGATGAAGCGCTGGTCTTTTTGGTCCAACGCGTGCTCAAACGCAAAGG ATTTGTGGTCAGCACCTTCACAGATCCCCGTTTGGCTGCTGCAGCCTTGC GAGCCCGCCCGCTGGACTTTGATCTGTTGGTGACGGACTACAACATGCCA GGTTACAGCGGCATAGAACTCTTGCGGGAAACCCGTTTGATTCGACCTGA TCTCCCTGTTGCCTTGGCATCGGGCTATGTGACCGCAGAGATCGAGCAAA GTGCCCTCAGTGCAGGCGCGCGGGCACTGATCCACAAACCCAATGATGTG GACGAGTTGTGTGAGACCGTCCAGCGACTTCTCCAAAGTGTCGATGCACG CTGA >Rfer_0703 periplasmic sensor signal transduction histidine kinase ATGGACAGAGCCAATCTTGTACTGACGACGTGGAGCTATGGCGCGGTGGG TTTTGCCTATTCGGCTTTTGCCCTTCGGCTGCTTCAGCTCGGTTACGGGC ACTCCAGGCGCGAGTGGTCCGAAGTGGCAGTGCTGGCGGCCGTTTCATGG AGCGCTTTGTGGGGTTGGTTTGGGTTGGCGCTGCTATTGACCGGCTCGCC CGCGTTTTTGCTGTTGAGCACCTTGGCTGACCTGCTGCGCTATGCCTGTT GGTACGCCTTTTTCCTGATTCTGCTGCAACCCAGTCGAGCATCCGGCGCC GCGATTGGCACGGCCTGGATGGTCCCGCTGGCCGCAGTCGTGGTGGGCTT TGGACTGTTGGCACTCGCTTTCGCTGCCATGCGTATCAACGCGCTGGGCG ACGCTTCAAAATTGATCTTGTTGAGCTCCATGGTGTCGTCCGTATTGGCC ATGATTTTGTTGGAGCAGATATTTAGAAACGTGGCGGAAGAGGCACGCTG GAACATCAAGCCCTTGTGCCTGGGTTTGGCGGGTGCATTCTTATTCGACT TGTATTTATTTTCAGAGGCCACTTTGTTCAACCGTCTCGACGCCGATGCG CTCAGCATCCGTGGCGCCGTGCACACGCTGGTGGTGCCGCTGCTGTTGCT GTCCACCACGCGGCGAAGCGATTGGATCGCAAGTATCCGCCTGTCACCCA AGGCCGCTTTCCATTCGGCCACGTTGCTGATGGCCGGAATCTATTTGCTG TTTATATCCAGTGTCGGCTACTACGTGCGCTACTTTGGTGGCGAGTGGGG GCGGGCGCTCCAGTTGGCATTGATATTTACGGCCTTGGTGCTCCTTCTTG TGCTGGTGCTGTCGGGCTCGGTGCGTGCGCGGCTTCGGGTATTTCTGGGC AAACATTTCTTTCGTTACCGTTTTGACTACCGCGAGGAATGGCTCAAATT TACCCGTACCCTGGCGGCCAAAGACTCGCCGCAGGAGATGGGGCAGCAGG TGATCCGGGGTTTGGCAGACATGCTGGAGAGTCCAGCCGGCGGTTTGTGG ATGAGGGTCAAGGGCGAAGCTGCTTTCAGCCAGACGGCGCGCTGGAATCT GGCGCAGACGCTGGAGAAAGAAGACATTAACTCGCCCCTTTGTCAGTTCT TGACGAGCAGTGGCTGGGTGGTGAATCTGGAGGAATACCGTTCCTACTCC CGGCGCTACGGCGCGCTGAAATTGCCGCGCTGGCTGCAGGACTTGGCGCA GGCTTGGCTGGTGGTGCCGCTGATGGTCGGACCGGAGTTGATCGGTTTTG TCGTGCTGGCCAGCGCGCGCACGCGGGTCGATGTGAATTGGGAGGTGATT GATCTGCTGAAAACAGCGGGTCAGCAGGCGGCCAGCTTTCTGGCCCAGAT GCAGGCGACGGAAGCCCTGCTGGAAGTGCGCAAGTTTGATGCGTTTAATC GCATGTCGGCCTTTGTGGTGCATGATTTGAAAAACATTGTCACGCAGCTT TCTCTGATGCTCAAAAACGCCAAGCGCCTGGGCGATAACCCGGAATTTCA GCAAGATATGCTGTTGACCGTTGAAAACTCACTTGACCGAATGCGCCAGT TGATGCTGCAGTTGCGCGAAGGCGCGACGCCGCCAGGGACGGCATTCGGG GTCAACCTGGGTGGCATCATTCAGCGCATTGAGGCGCAGGCGGCCGGGCA GGGTAGAACGCTGGAGGTCAATCTGTCAGAGCCCGTCGTGACACGCGGTC ATGAGGAGCGCCTGGAGCGGATCATCGGCCATGTGGTGCAGAACGCATTT GATGCCACCGACCCGTCCGGGCGGGTCTGGGTCAATCTGGATCGCGCGCG CGGTCAGGCCAGGATTGTGGTGGGTGATACCGGGCAGGGCATGTCGCAGG ACTTCATCCGGGAGCGACTGTTCAAGCCGTTTCAGAGTACCAAGGCCTCC GGCATGGGCATTGGTGCCTATGAAAGTTTTCAGTATGTCAAAGAGCTGGG CGGCCAGATCGAGGTCGACAGCTCGCCCAATCAAGGAACGACGGTCAAGA TGCTCTTACCCCTGTTTGAGGCGCAAATGACCTCCGACTTGCACGCGCTG GAGGCTGCATGA >Rfer_0577 multi-sensor signal transduction histidine kinase ATGTTCTGGCGCTTTTTTTCCTTCATCGCGTGCCAACTCCTGGGTGGCCT GGTCGGTTGGTACGCGACCTCATCGTCTCATGCGCCGACCAGCGAGCTGG TGAGCACCCTGGCCGGTGTGGTGTTGGGCGGCGTGGTCTGGTTTTTGCTG GATACCTCGCGCGGCGCGCGCTTGTTGCGCTGGCTGCGCGTCGGTGATGC GTCCGAGGTGGCCATGCGCTCGGGCTTGTGGGGTGAGGTGTCGGACCGGG CCCGGCGCCTGATTCGCGCCCGCGAGCAAATGACGCTGGAGAGCCAGCGC CGACTGCAGGATTTCCTCTCGGCCTTGCAGGCCTCGCCCAATGGCGTGCT GCTGCTGGATGCGCAGGGACAAATCGAGTGGCTGAACCAGACCGCAGCCT CGCATTTTGGTCTGGATGCGCAGCGCGACCTGTTGCAGCACCTGGGCAAC CTGGTGCGCGATCCCGCATTTGCGAGCTACTTTGCCAGTCGGGATTACCG CCATGAGCTCATCATGCCCGGGCGCGAAAGCACACCGGCGCGGCCGGTCA GACTGTCCGTTCACCTGCATCCCTATGGCGAAGGGCGTCTGCTGCTGCTT TCCAGCGACATCACGGCCGTCGAGCAGGCCGAGGCCATGCGGCGTGATTT TGTCGCCAACGTCTCGCACGAAATCCGTACCCCGCTGACCGTGCTGGCCG GTTTTGTCGAAACGCTGCAAACCTTGCCCCTCAACGACGAGGAACGTGCC CGCTACCTGGCCTTGATGGCGCAGCAGGCCGGGCGCATGCAAACCCTGGT CAATGATCTGCTGGTCCTCTCGCGGCTGGAGGGCAGCCCGCTGCCGAGTG ACAGCGAGGGCATCGCCGTGCCAGCCCTGATGCACCAACTGGAGCAGGAC GGTCGCGCCTTGTCAGCCGTCATGAACCCGGCCTCCGAGCCCTTGCAGCA CCTGACATTCGACAGTTCGCTCGCGGGTGACATCATGGGCGCGCCCAACG AATTGCTCAGTGCGCTGGGCAACCTGGTGAGCAACGCCATTCGCTACACG CCCAGCGGCGGGCAGATTCAGGTGCGGGCGCGACTGTTGGCCGACGACCG GGCTGAGTTTTCAGTGTCGGACACCGGCCCCGGCATCGCCCCGGAACACA TCCCGCGCCTGACCGAGCGTTTTTACCGGGTCGACCGCAGCCGCTCACGC GACACTGGCGGCACCGGCCTCGGGCTTGCCATCGTCAAGCATGTGGCGCA GCGCCACGGTGCCGAGTTGAAAATTGACAGCACACCGGGCAAAGGCTCGG TATTCAAGATTATCTTTCCGGCCAGCCGCGTCAGACTGTCAAAGGCGCTT CCTCCATCGCTTCCAACTGCTCCTGCAGCATCTGCACCTGGCCCTGCCAG TAGTCGCTGGAGCCAAACCACGGGAAGTTGA >Rfer_3812 activator of osmoprotectant transporter ATGACCCGTACTACACCCGAAGCACCCGCCCAAGCCGATACACCGACGCA GCCCGCAGAGCAAGCCAGCAAGCCCGGGCGCTCGCAAGCTGTCCAGCCCG TGCTGGAGAAGCTGTTTGAACTCTATCCGCATCTGTTTGGCGCCGAGTTC CTGCCGCTCAAGCTTGGTATTTTTCAGGAGCTGCTGGCCCTTCACCCCGA GCAGTTCCAGCGCGACAGCCTCAAGCTGGCACTGGGCCTGCACACCCGCT CGACGCGCTACCTGCAAAGTGTTGCCGCAGGCAAGCCGCGCCATGACCTG CAGGGCGCAGCGGTGGAAGCTGTCGCCCCGGAGCATGTGCACTTCGCCCT GCTGGAGCTGTTTCGCCGTCGGCAAGGCCGCACCCAGGCCGATTTGCGGC CAAAATTGCGGGCCCAATTGCTCGCCGCGTTTGCCGCGTCCGGCTTGACA CGCCAGGAGTACCAGGCCAGGGTGCTGACAAAAGATGCGAGCGCCAATAC CTTGCTGGAGGAAGCATTTGCCGAACTGGATCAAAAGTTGGCCAAGCAAG AGGCCTTGCTCAGAGCCTTCAACAGCAGCGGCAAGACACCCGCAGAGTTT GCCGACATGTACGGACTGGATCAGCGCGACGTCATGCTGGTGCTGGATCA GGGTCGCAGCCAGCCGGTGCCCGCTGTCAAACCCTAG >Rfer_3783 cyclic nucleotide-binding domain (cNMP-BD) protein GTGTCAGACGATTTTCGCTTTACTGTGGCGCCCTTTGACGAACTCAGCGC CACCGAACAGGCTCTGGTGCGGGAGACCGCCACACGCGTTTGTCTGGCCG CGGGCGACACCTTGCTATCGCCGACCGCCGTGCCGCAGCACCTTTGGCTG TTGAGCATCGGCCACGTGCAACAAGACGAAGACGCCAGCAGCCTGGTGCT GGGTGCTGGCGAAACGCTGGGCTGGCGAGCGCTGCTGACCGGGCGCTGTC ATGCCACGGCCACGGCGCTCGATGCCGTACAGGCGTGGCAATTGCCCAAG ACGGCGATCCTTAGCTTGCTTGCCAGCAACGCGCGCTTTAGCGCCCGGGT CTTTGCCGGCATGTCGCGCCAACTGGTCGAGGAGGAGGATGTCAACCACA ACCGCGAATTGCTTGCCCTGATGCTGGTAAGGGTGCGCGACATTCCCCTG CACCCTCCTTTTTACGTCGATGGCAGCTCCGATATGGTGTCGGTCTGCCG CCTGATGTCCGAGCATCAACGCACCAGCGCGCTTGTGCATGATGTCCTGG ATGGCGTGCCGCGGTTGGGCTTCTTCACAACCACGGACCTGCGCGATGCC ATGCTGCGGCCGCAACCGTTGGCAGTGCGCGAAGTGGCGCACTTTGCGCT GATTACACTGCCGCCGGAGGCCGAGTTGTTTGATGCGCTCTTGACCATGT TGCGCCATCGGGTGCACCGCATCCTGGTCAAGGACGGCGACGAGATTCTC GGCGTGCTCAGCCAACTCGACCTGATGGGCTTTGTCACCAACCACTCGCA CCTGATTGCCCTGCAGGTCGATCAGGCCAGTAGCGCCGAAGAGCTCAAAG TGGCGGCGCAGCAGGTGGACGAGTCCGTTGGGCTGCTGGTGCGTGGAGGC GTGCGCATCGACATCGTTTCGCGCCTCGTCAGCGGTCTGAACGCCCAAAT ATTTGCCCGCCTTTGGTCGCTGGTCGCACCGGCCGAACTGATTCAAAACA GTGCGCTGCTGGTGATGGGCAGTGAAGGGCGGGGCGAGCAGATCTTGAAA ACCGACCAGGACAACGCCTTGCTGCTGCGTGACGGCTACCACTGCGAGGG TCTGGCCGACATCGTGAACCGCTTCAGCACCGCACTGCTGACCTTTGGCT ACCCCCCCTGCCCAGGCAACATCATGGTGACCAACCCGCTGTGGTGTCAG CCGCTGGCTGGCTTCAAGGAAATGATTGGCCATTGGTTGCTGGGTGGCAA CCCGGAAGGTGCCATGAACCTGGCCATCTTCATTGACGCCCACACGGTAT CGGGCGACGCCACACTGTTGGGTAACGCGCGCGCCTTTGCCTTGGATTTG GCCCAAGGCAGCGAGGTTTTCATTGCTCGACTGGCGGACGCCATCAATCA GTTCAGGGAGCCTGCCACGGGTTTCTTTGGCGTTTTGAGCCGGTTGCGTG GTGCGACGGCGCAGACCTTCGATCTCAAAAAACTCGGCACTTTCCCCATC GTCCACGGTGTGCGCGCGCTCGCCCTGGAGCACCGACTGGAGGCCCTGAG TACGGTTGACCGGCTGCATGATTTGGCCAGTCAACATGCCCTGACACCCG AAATGGCCCGTGATCTTGAGGAAACATTGCACTTGCTCATGACACTCAAG TTGCGTAACAACCTGCGTCAAATCGCACTCGGGCAGCCCGTCACCAACCT GGTCGTGCTCGCAGACTTGAGCACACTTGAGCGCCATCAGCTCGACGCTT CATTGGCCATCATCCGGCAATTTCGACTGCACCTGCAGCTACACTTTCGA CTCAATGCATGA >Rfer_2540 two component transcriptional regulator, winged helix family ATGACACTTCGGGTGCTGGTGGTCGAAGACGACCGCGAAATACGGGCGCT GATGCAGTCCTCTTTGTCGGTGGAGGGCTTTGAGGTACAGACCGCCGTAT CGCTGAGCGAGGCCAGCGCGCTCTTGCGCCACAGTCCGCCCGATGTCATC GTGCTGGATCTGGGACTGCCCGACGGCGACGGCGTGCAACTGGTGCGCGA GGTGCGCACGCGCCATTCCTTGCCCATCGTTGTGGTGTCCGCCCGCCACC AGGAGGCGCAAAAAATCCAGTTGCTTGACGCCGGTGCCGACGATTACCTG ACCAAACCGTTCAGTGTGGGCGAACTGCTGGCCCGCATTCGGGTGGCGCT GCGCCACCGCGGCACCGCGCTGGCCGCAGCGGTCACGGTGCATGAGCTGG ACGATCTGCGCATTGATCTGGCGGCCCACAGCGTCCTGCGCAACGGCGAG GTGCTGCATCTCACGCCGACCGAGTTCAAGCTGCTCGCGCGCTTGGTGCG CAGTGCGGGCCGCGTGGTGACGCACCGGCAGTTGCTGCTCGATGTCTGGG GCCCCGAGTTCACGGAGCACACGCACTATTTGCGGCTCTACATGGCCCAG TTGCGGGCCAAGATCGAGCGCGACCCGGCCGAGCCGCGCCATCTGCTGAC CGAGACCGGTGTCGGTTATCGCCTGGCAGCCGTTTGA >Rfer_1908 PhoH-like protein ATGCCATTGCCTCCTGCCCCTGCCAAACGCGCCGCGCTGCTGTCCGAACG GGACTACGATGTGCCGGTCGCAAGGCTGCCCCAAACACGCAAGACTGCGA GCCCATTGGCCGAGCCTGGCCTGACCGAAACACCTCAGGCACGGGTGGCC TCCGAAGTCACGCCAGCCAGTGGGCAGGCCCCTGCCGCAGCGCTTGCAGA CAGGTCCGCAAGCCGCACCAGAACACCCCGAACAAGCCCTTCGGCCCGCA AGACTCGGCCCGAGTCCGACGTGCAAGTGCAAACGCCGCTATTCGCGCCA GTACCTGCGCCAGTACCCGCTTCAACCCGAACCCAGCCGCCCGCCGACAT CAAGCCCAAGAAGACCAAACACAACGGGGCGGCCAAACTGTTTGTGCTTG ACACCAACGTGCTGCTGCACGACCCGATGTGCCTGTTCCGCTTCGAGGAA CACGACATCTTTTTGCCCATGATCGTGCTCGAAGAGCTTGATGCCCACAA AAAAGGCACCACCGAAGTCGCCCGCAACGCACGCCAAACCAGTCGTTCAC TCGACGCATTGGCCGGCCATCAAGGCACTGACATCGCCAGCGGTCTGCCG CTCAACGCCACCGGCCACCGCGAAGCCAGCGGCAAGCTGTTTTTCCAGAC CCAATTGCTGGACTACACGCTGCCGACCAGCCTGCCGCAAGGCAAGGCCG ACAACCAGATCCTGGGGGTGGTGGAAGCCCTGCGCCAGCAACAGGCCCGC CAGCACAAAGAGCTGTCCACCAGCGCGCCCGAGGGCGCCGCACGCCCCGT GGCGCATGAGGTCGTGCTGGTGTCCAAAGACATCAACATGCGGGTCAAGG CGCGTGCGCTGGGACTTGCGACCGACGACTACCAAAACGACAAGACACTC GATGACGGTGACTTGCTGTACTCGGGCGCCATCGCCCTGCCGGCCAATTT CTGGACCAGTCAGGCCAAGACGGTCGAAAGCTGGCAACAAGGCGCGTACA CGTTTTACCGCATCAGCGGTCCGATTGTTGCCAGCCTGCTGATCAATCAG TTTGTTTATTTTGAATCGCCCGGCGAGCCCAGTCTGTACGCCCGCGTGAC TGAAATCCGGGGCAAGACGGCGGTGTTCAAGACCCTGAAGGACTACACCC ACCTCAAGCACGCGGTCTGGGGCGTCACCTCCCGCAACCGGGAGCAAAAC TTTGCCCTGAACATCCTGATGGACCCTGAAATCGACTTTGTCACCCTGAC CGGTCAGGCCGGCACCGGCAAGACCCTGATGGCGCTGGCCTCGGGCCTGA CGCAGGTGCTTGATGACCGGCGCTACACCGAGATCATCGTCACCCGCGCC ACCGTCAGCGTGGGCGAAGACATCGGTTTCCTGCCTGGCACCGAAGAAGA AAAAATGGGCCCCTGGATGGGCGCGCTCGATGACAACCTGGAGGTGCTGG GCAAGACCGACACCAGCGCCGGCGAGTGGGGGCGCGCCGCCACCAGCGAG CTGATCCGCAGCCGCATCAAGATCAAGAGCATGAACTTCATGCGCGGGCG CACCTTTTTGAACAAATACGTCATCATCGACGAAGCGCAAAACCTGACGC CCAAGCAGATGAAGACGCTGATCACACGCGCCGGCCCCGGCACCAAAATC ATTTGCATGGGCAACATCGCCCAGATCGACACCCCGTACCTGACCGAGGG TTCTTCCGGCCTGACCTATGCCGTGGACCGATTCAAAGGCTGGGCGCACG GCGGGCACATCACGCTGGCGCGCGGCGAGCGCTCACGGCTGGCGGACTTT GCCAGCGAAGTGCTGTAG >Rfer_2893 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGGAACGCCCTGAAGAAAGCTGGATTGAGTTGAGCCTTGATGACCTGCC TGCCGCAAAAATGAATCCGTCCGAGGAAGTCCGTCGCCTGCAAACGGCAT TGTTTGACGCGCAACGCCGTTTGCAGGCCGTGGCCGATGTTGCGGGCGGG TTGATCGGCAAACTTGAGTTCGAACTGCGTGAGGGCGACAGTCTGCTGCT GGTCGGCTTTGATGTCCAGGCCGAACAACTGCTGGGCAAGGCCTGTGCGC CGTTTTTGGGTCAGCCTTTGTTGATGCTGTTGCCGGGCTTGTCCGCCACG GAGCTGCCGGCAGCCTTGTTGGAGGTGGCGCTGCACGGCGGTGTGATCGA GCCGCGCAGCCTGCTCGGCGAGGGTTTGTTGTCGGGGAAATCTTTCACGT TCTTTGCGTTCCAGTTGGCGCCTGCGCGGGCCGTCGTGAAGTTCTGGGAC AGCGCGGGCGCGCTCGAAACCCAGGCGCTGCGCATGCGCTCGCAGCAGCA ACTCGCCGCCGTGTTCAGCCAGAGCCCGGTGGCCATATCGCTGAGCCGTG AACGCGACGGTGCCTATGTCGACGTCAATGAACAATGGACGCTGCTGACC GGTCTGTCCTTGCAGGAGGTGCTGGGGCGGACCTCGGTCGAGTTGGGTCT TTGGCCCGATGGCACTGCGCATGATGACGCGTTGGCGCAGGCTGGCGAAG GCGCTCGCTTGCGCAATCTGGACCTGCCGTTCGTCCGCCAGGACGGGCGC CAACTCGTCCTGCAAATCAATGCTGCCCGCATCGAGATCGGCCACACCGC CTATTTTTTGAGTTATCTCAAAGACGTGACACCCGAGCGCGCCATGCAGG CCGAGTTGCTGGCCAGTGAGCAGCTTTTGAAATCGACCAATGAGCGGTTG AATCAGCAAATTCATCTGTTTGAGTCGATGGAGAATCTGGCTGCGGTGGG CTACTGGACCTCTGGCGCTGACCCGGCTACTCTGCGCTGGTCCAAGGGCA TGTACCGTCTGGCCGGGCTGGCGCCCGGCTCGGTGATGCATCGGTCGGTG GGGCGCAGTCGCATCCGGGCCGAGGACCAGGAGAAATTTGCCCAAGCCAG GCGTGCGGTTGATGGCGCGATCGTGGAGTATCAATGGGAGCATCCGGATG GCCGCATGCATTGGCATCGTTCGCGCATGCAACATGGGTCGGGCGAGGGC GGCGAAGCGATCGTTTTCGGCGTGGTGCAGGACGTCACGCACGAACGGGC CGCGGCCCTGGCGTTGCAGGACCGGCTCGGCTTTATTCAAAACATCACCA GCCGGGTGCCCGGTATGGTGTTTCAGTTGCGGCTCAAGACCGATGGCAGA TTTCAGTTTGGCTACGTCAGCGACCTGGTGCGAGAGATTTTCCGGGGGGT GTCGCCAGAACAAATCATGCAGGATGCGGCGGGCATCCTGAAGCTGCACC ACCCCGATGACGTGTCAGAATTTATTGCCTCCATCAAGGCTTCTGCGCGG GAGCTTAAGCCCTGGCGCCATGAATATCGCCTGCGCTTTGAGGACGGCGA GGTCCGTTGGTTGCTGGGCCAGGCCACGCCTGAGCGCGAGGCGGATGGCA CGGTGCTGTGGAATGGCTTGATCACCGATATCACCGCGCGCAAGCAGTCC GAGGAGCGCTTGCGTGAAAGTGAAGCCCGTTTTCGGGCCTTGACCGAACT CTCGTCGGACTGGTATTGGGAGCAGGACGCACAATTTCGTTTTGTTCGAC TCGATGGCAGCTCGCAGACCAGCATGCGCTTGCCTGAGGACAACTATCTT GGCGTCACACGCTGGGAAACCGATGCGCAGGGCGTCAGCCAGGCGCAGTG GGCAGCACACCGGGCGGTGTTGCAGGCGCATGAAACCTTTCACGATTTCG AGATGCTGTGCACCGACGCGGTCGGCTGCCTGACTTGGGTGGCCATCAGT GGCACGCCAATTTTTGATGTGCAGGGCCAGTTCAAGGGCTACCGGGGCAT TGGGCGCGACATTTCCGAGCGCAAACGGGCCGAAGAAAAGATTGAGCGGC TGGCGTTTTATGACGTGCTGACCGATCTGCCCAATCGCCGTTTGCTGATG GACCGCCTGCAGCAGGCGCTGGTGAGCAGCGCGCGCGAACACGGCGCCGG CGCGCTGCTGTTTATCGATCTGGACAACTTCAAGGACCTCAACGACACAC AGGGCCACGATGTGGGCGACGCGCTCTTGCAGCAGGTGGCAAAACGTTTG CTGGCCAGTGTGCGCGAGACCGATACGGTGGCGCGACTCGGTGGCGACGA GTTTGTGGTGATGTTGCAGGGCCTGGAGCGCACCCAGGCTGATGCCATCA CGCAAGTCGAGCAGGTGGGACGCAAAATCATGGCTCAGCTCAACCAGCCT TACCGGCTGGGCAGCGCGGAGCACCACAGCACGCCCAGCATCGGCGTCAC CTTGTTTGACAACCAGCAGCAGACCCTGGACGACCTGTTGAAACAGGCCG ATCTGGCGATGTACGAGGCCAAGTCTGCGGGGCGCAACACGCTGCGCTTT TTCGACCCGACCATGCAGGCGCTGGTGACGCAGCGCACGGCACTGGAGCT GGAACTGCGCCACGGCCTGGCGCGTGACGAACTGGTGTTGTTCTACCAGC CGGTGGTTGATCAGGATGCGCGCGTGGTCGGCGTTGAGGCGCTGGTGCGC TGGCAGCATCCGCAGCGCGGCCTTGTTGCCCCGCTGGCATTCATCCCGAT GGCGGAGCAAACCGGGCTGATCCTGCCGCTGGGGCAGTGGGTGTTGCGGG TGGCCTGCCTACAGCTGGTGAGCTGGTCGGCGCAGGCGGCTACCGAACGC CTGACCATGGCGGTGAATGTGAGTGCGCGCCAGTTCCGCCAGCCGGAGTT TGTGCAGCAGGTGCTGACCATGTTGCGCCAGACCGGCGCCAACCCGAAAC GTCTGAAAATGGAACTGACCGAGAGCCTGTTGCTCACCGATACCCAGGAC GCCATCGCAAAAATGAGCGAGCTGCGCGACGTCGGTGTGCGCTTCTCGCT CGATGACTTTGGCACCGGTTATTCGTCGCTGTCTTACCTCAAGCTGTTGC CGCTGCAACAACTCAAGATTGATCAGTCGTTTGTGCGCGATGTGCTGACC GACCCGAACGATGCCGCCATCGCGCGCACCGTGCTGGCCCTGGGTCAGAG CCTGGGGCTGGGGGTAGTGGCCGAAGGTGTGGAGACGGTTGGCCAGCGTG ATTTTTTATTGCAACACGGCTGCACCCGGTTTCAGGGTTATTTGTTTGGC AAGCCGGTGCCCATAGCTCAATTGAGGCTGGGGGGCGCTGATTAG >Rfer_2451 carbon starvation protein CstA ATGAATCTCGTTTCCAAACATGCCATTTGGTTGTTTTTGACGGTGGTCGG GGTATTTTCCCTTGGCACCGTGGCGTTGTCCCGGGGCGAAACCATCAACG CCTTGTGGATCATTACGGCTGCAGTTGCTATCTACCTGGTCGCGTACCGG TACTACAGCCTGTTTATCGCCGAAAAGGTCTTGCAAATTGATCCGACGCG GGCGACGCCAGCGGTGCGCCACAACGACGGTCTTGATTTCGTTCCAACCA ACAAGTACGTCCTGTTCGGCCATCACTTTGCCGCCATTGCCGGTGCGGGC CCCCTGGTCGGGCCGGTGCTGGCAGCGCAGATGGGCTACCTGCCGGGAAC GCTCTGGATCATCGTCGGTGTCGTGCTTGCGGGCGCGGTGCAGGACTTCA TGGTGCTGTTTGTATCAATGCGTCGGGACGGACGCTCACTTGGCGACCTC GTCAAGTCGGAACTCGGTCTCGTTCCGGGCATGATTGCTCTGGTCGGCAC TTTTGTGATCATGGTGATCATCCTCGCGGTGCTGGCACTGATTGTGGTCA AGGCGCTGGCCGCAAGCCCATGGGGAACCTTCACCGTGGCCGCTACGATT GTCATTGCCATGTTCATGGGCGTCTACAGCCGTTATATCCGCCCCGGACG TGTGGGCGAAATATCGATCATCGGCTTTGTGTTGCTTATCGCCTCCATCA TCCTTGGTGGCCAGGTCGCGCAAAGCGCGACGTGGGCGCCGCTGTTCACT TTCGACGCCAAACAGCTGAGTTGGATGCTGATCATCTACGGTTTTGTGGC CTCGGTCCTGCCCGTGTGGCTGCTGCTCGCGCCGCGTGACTATCTGTCGA CCTTCCTGAAGATCGGAACCATCGTCGGCTTGGCGCTGGCCATGGTCTTT GTCGCACCGAATTTGCGCATGCCAGCGGTCACCCAGTTTATCGATGGCAC CGGTCCGGCTTGGTCGGGTAGCCTCTTTCCGTTCATTTTTATCACGATTG CCTGCGGCGCGGTCTCGGGATTCCATGCGTTGATCGCGTCCGGAACCACC CCCAAGCTGCTCGACAACGAGAAGAATACCCGCATGATCGGTTATGGCGC CATGTTGATGGAGTCCTTTGTGGCCATCATGGCGATCGTGACAGCCTCGG TGATCGATCCGGGCGTCTATTTCGCCATGAACAGCCCGGCCGCAATCATT GGCACGAGTGTCGACGGCGCCGCACAGATCATTTCCCAGTGGGGTTTTAT CATCACGCCTGACGTGCTGCTTCAAACCGCAAAGGATGTGGGTGAGAGTT CCATTCTTTCGCGTGCGGGCGGTGCGCCCACGCTGGCAGTTGGCATGGCC CAAATATTCTCTCAGGTGATTGGCGGCAAGGCCATGATGGCCTTCTGGTA CCACTTCGCCATCCTGTTCGAGGCGCTATTCATCCTGACCGCCTGTGACG CCGGTACGCGTGCCGGACGCTTCATGCTGCAGGACCTGCTGGGCACCTTC GTTCCCTCCTTGAAGCGGACCAACTCCTGGGGCGCCAGCCTGACCGCCAC CGGTCTGTGCGTCGCGGCCTGGGGATATATTCTTTACCAGGGTGTAGTCG ATCCTCTTGGGGGCATCAACAGCCTGTGGCCGCTCTTCGGCATTTCCAAC CAGATGCTCGCTAGCGTTGCGCTCATGCTTTGCACGGTGGTGCTGTTCAA AATGAAGCGGCAAAAATACGCATGGGTCACGATTTTGCCAACATCCTGGC TGCTGATTTGCACCCTGGCGGCGGGCTGGGAAAAGGTTTTTGACAGCAAT CCAAAAATTGGTTTCCTCGCCCTTGCCAACAAGTTCCAGGCGGCTGTGGA CAAAGGCGTTCTTCTCGCTCCGGCAAAAAGCCTTGAACAGATGAAGCAGA TTGTTTTCAATAATTATTTGGACGCCGCACTGGCCGTCTTCTTCATCTTC GTGGTGGTTAGCATGTTGTACTACACGGTCATCGCCTGCATGAAGGCTTT GCGTGAGGACAAGATGACCAGTTGTGAACTGCCGTACGTGGCCATACCTG CCGCGCTTTGA >Rfer_2293 metal dependent phosphohydrolase ATGACCACCAACTCTACTTTCAATGCTCTATACAAGTACACCAAAGCGCT GTCGGTCGCGCTCGGCTACCGCGATCAACTGACGCGTTTGCATTCCGACC GTGTGCTTGCTTTGTCGGTCGAAATGGGACTGCATTGCGGTTTGTCTGCC AGCGAAATCGACGCGCTTCGAATAGGTGCCGCGTTTCATGACATCGGGAA AGTTGGCATTCCGGATGATGTATTGCTCAAACCGGGGAAGCTGGATCAGG CTGAGTGGCAATGCATGCAAGGCCATTCCGAGATTGGAGAACAGATCCTG TTGAGCACCGATCTGAAAGGCGCAAAATCCGCCGCGCTGGCGATTCGCCA CCATCACGAGCATTTCAATGGGAGGGGTTACCCCGACCGCCTTCGTGGCG AGCAGATTCCGCTTGCGGCACGCATCATCTCGATCACTGACAGCTACGAT GCGATGGCTGTTACCCGGTCCTACCATGCAGCTAAAAAGCATGGCGAGAT CATCACAATTTTGCGCGCGGAAAGCGGCGAGAAACACGATCCTGAGCTGA CGCGTCTGTTTCTGAACTTCATTGAGGGCAGTTCGCTCAAGACGCCACTT GTTTGA >Rfer_2039 two component transcriptional regulator, LuxR family ATGAATCGCCTGAAAATCCTCGTTGTCGATGACCATGCCCTGGTGCGCGA AGGCTTGCACCAGGTTCTGCAGGGGCTGAACGAACCGGTTGAGGTGCTGG AGGCTCCTGACTGCGAGCGTGCTTTTGAACTGGCCGCCCTGCATCCTGAG CTTGATCTGGTGCTGCTCGACTACGACCTGCCCGGCATGAACGGCCTGGA AGCACTCAAGGTGCTGGGCCAGGCGCATCCCGAGCTCCCCATCCTCATGC TCTCGGGCATGGCCAATCCGCAGATGGTGCGCAAGGCGCTGGCCAGCGGC GCGGCCGGTTTTCTGTCCAAGAACGGCCATAGCGCCGACTTGCTGGCTGC CGTGTGCCTGGTGCTGGCGGGCGAGGTTTATGTGCCCATGGACCTGCTCA CGCCAGGCGCCTCCCCGGGCAAGTCGGCGCCCCAAGTCACGCCGCGCCAG GCCGAGGTCCTGGCCCTGCTGCTGGACGGCCGCTCCAACAAGGAAATCAG TGAAGCGCTGGCGCTGACCGACGACACCACCAAGAACCATGTAACCGCCC TGCTGCGCGCTTTTGACGTCAAAAGCCGCACCCAGCTGGTGCTGGCTGCC AGCCGCCAGGGCTACACCGCCTCCCCGCCGTCAGCTTGA >Rfer_1737 anti sigma-E protein, RseA, Burkholderiaceae specific ATGATGCAAGAAGTTGCGAAAAATCGTGAATTGATATCGGCACTGGCCGA TGGACAGTTGCGCGACGAGGATTTCGCGCGAACGGTCGAATGGGTCAATC AGACTGAAGAGGCCCGACTCACCTGGCACACCTATCATCTGGTGGGCGAT GTGTTGCGCTCGGGTGAGCCGGTGGTGAGTGCACGCGACGCTGATTTTCT GCAAAGTCTGAAGTTGCGCTTGCAGCAGGAGACGCCGCAAGTGCGCCCTG TGAATGCTCCTGAATTGGTAGCTAATGATCCAGGTATGACGGTGGCTGGA GTCCAGAATGGCTCAAAATATTGGAGCGCCAACGACGGTCGCTTCCGCTG GAAAATGCTGGCTGGCTTGGCATCCTTGTCGACGGTCGCGCTCATTGGCT GGCAAATTGTCAGCGGCTGGGGCGATCCGGGCGGGGCGCGGCAGCTCGTG CAGGTGCCAGTTCAGGCGCTCCAGCCCGAGGTCGGGTTAACGCAGCCTGG CGTCGGTGCAGAGCCGCAGCGCATGATCCGCGACCCGCAACTTGATGCGC TGCTGGCGGCACACAAACAATTTGGCGGCACGTCTGCGCTGCAGGGACCG GCTGGGTTTCTTCGTAACGCCACGTTTGAGGGAGGTGTCCCTTGA >Rfer_2055 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGCCAAGCAGCCCGAGACCGGGTGCGCCACACCAACAACGCGGGCCACA CGCTTTGCTACCTGAAGCCATGCCATTTATTCGTCAACGCATCGGCGCAC TAGTCAGGCTCAATCACCATGTGCCGATCTGGTTGCTGGCCGCGTTGGTG TTTGCCGCAGTCTGGCTGCATACTTTTCGTCTGATCAACGATGACCGCGC CAAAGCCATGGGCGGCGCAGAAAACGAAATAGTCAATCTGGCGCGGATTG GCCAGGAACATGCCGAACGCATCTTTTACAGCGTTGACCAGACCTTGCGC CTGGTTCGTTCTGAATATCAGGAACATTCAGGTGGTCTTGACCTTGGCAC GATGCGTGTCGAGGGGGTTTTTGATGAGAGAACCATTCGTCAGGTCAGTA TCGTTGACGCGTCGGGGATTCTTCGGTTGAGCAGCCTGCCTCTGAGCGAT CATCGTGATGTGTCGGATCGGGACTACTTCAAGGCCCAGCGCGAAGCTGC CAGCGACACGCTTTTCATCTCAAAGCCCGAGTTCGATCTGGCTTATGGGG TGTGGTCGGTCCGGGTTTCGCGTCGGATCGTGGGCAATGACGGAGAATTT GCTGGTGTGGTTGTCGTGTCGCTCGATCCCACCTATTTCACCCGTTTTTA CGGCGAACTCCAGCTCGGTCATGAGGGTGTCGCGGCGCTGTATGGATTGA CCGGATCCTTGCTCGCCCGCAAGACCGCGCATACGGAGACATTCACTGGC AATGCCGTGTCGAGCCCGGTCTTTGCACGTATTGCCCGCGGCGATACCAG CGGCACGCTGACCTTTCAAGCCCAGACCGACGGTATCGAACGCCTTTACC ACTTCAAACAATTGGCTTCTTACCCGGTACTGGTATTGGTCGGGCTGGCC AGCAAGGACGTGTTTGCCCAGCAAGAGGACACCCTGCAGCATCGCGTATG GGAAGCCGTCATCCTGAGTGTTCTCCTGCTCGTTCTTGGCGTGCTTCTAT CCTGGTATGTGGTCATCAGGCGGCGCCATTCGACGGCGCAGCGGCAAGCC CTGGTGCAGTTGCAAAGCCTCACCCACCATGTGCCGGGGGTGGTATTTCA GTACCTGCTGCGCCCCGATGGCAGTTCCTGCTTCCCTTTTGCCAGTGCTG GCCTGCACAAAATCTTTCGGCTCAGTCCTGAAGCTGTTGCGCAGGATGCT GCGCCGCTTTTTGCCTTGATGCACCCAGATGATGCGGCTGGTGTGGCGGC ATCGATCCAGGCCTCATCCCGTGCGTTGACGCCTTGGGTCGATGAGTATC GCGTGAAGTTTGGGGATGGCACGGTGCGCTGGCTGTCGAGCAAGGCCGCG CCGCAAAAACTCGATGACGGTTCGGTCTTATGGCACGGTTTCGTGTCCGA TGTCACGGCGCACAAACAGGCAGAAGAGTCCTTGATCACCTTGTCGGCGG CGGTCGAACAATCGCCGGTTTCCATCGTCATCAGCGACCCCCGGGGGCTC ATTGAATACGTCAATCCGATGTTCGAGCAGGTCAGTGGTTACCGGCGTGC CGAGGTCATGGGGCAGAACCCCCGCATTTTGTCGTCGCACGAAAAGTCAG AGGATGAGTACCGCGAGATGTGGGCCACATTGCTGGCGGGAGACATCTGG CATGGTGAGTTTCACAGCCGCCGCAAGGATGGCTCGCTGTTCTGGGAGCA GGCAGCGATTGCCCCTATTTTTGACGATCACGGCAGGCCGATTCATTACC TGGCGATCAAGGAAGACATCACCAAGCGCAAGGCGGCCGAGGCCGAAATC GAGCATCTGGCTTTTTATGACTTGCTCACCGGGCTGCCTAATCGGCGCCT GCTGAACGACCGGCTGCAACAGGTGCTGGCGGTCGGCACGCGCAGCCGTC GCCATGGCGCCTTGCTGTTCATTGATCTGGACAATTTTAAAAACCTGAAC GACACCCAGGGTCATGAGCAGGGTGATGTGTTGTTGCAGCAAGTGGCCCA GCGGCTCAACTTTTGTGTGCGTGAATGCGACACGGTGGCGAGGCTGGGGG GTGATGATTTTGTTGTGATGCTGCAGGATCTGAGCGAGCAGCAGACTGAG GCGGCCACGCAGGCCGAAGGCGTGGGCCAGAAGATCCTTGATGCTTTGCA CCAGCCTTACCCTTTTGGCCACTTTACGCACCACGGTAGTGCCAGTGTGG GTGTGGCGCTGTTCAACGCCAGCCAGGACACGGTCGAAGAGCTACTCAAA CGGGCTGACCTGGCGCTGTACCAGGCCAAGGATGCCGGGCGCAACACGCT GCGCTTTTTTGACCCCGACATGCAGGCGGTCATCAGTGCGCGCGCCGAGA TGGAGGCGGATATGCGCCTTGGCCTGCAGGAAAACCAGTTCCTGCTTTAT TACCAGCCGCAGGTGAACCACGCGGGCCGTCTGATCGGTGTTGAGGCGTT GGTGCGCTGGCAGCATCCACTGCGTGGCTTGGTGGCGCCAGCGCACTTCA TTCCCTTGGCTGAAGATACCGGCCTGATCCTGCCCTTGGGCCAATGGGTC ATGGAGGCCGCTTGCCGCCAATTGCAGCTCTGGCGGACACAAGCACATAC TGCGCAGTTGACGATCGCGGTGAACGTCAGCGCGTTGCAGTTTCACGGTG AGAGTTTTGTGTCGGATGTACTGGCAACGCTGGCGCGCACCGGGGCCCCG GCGGACCGGCTCAAGCTGGAGCTGACCGAGAGCCTGCTGGTCAAGGACGT TGATGGCGTCATCGCCAAGATGGTGGCACTCAAGGCTCACGGCGTCGGAT TTTCGCTCGATGATTTTGGTACCGGCTATTCATCGTTGTCCTATCTCAAA CGCTTGCCGCTGGACCAGATCAAGATTGACCAGTCGTTTGTGAGCGATGC CTTGAGCAACCCGAAAGACGCTGCATTGGTCCGGGCCACCGTGGCGATGG GGCGCGGCCTTGGCATGATGGTGATTGCCGAAGGCGTGGAGACCCAGATG CAGCGTGATTTTCTGGAGGGCGAGGGCTGCCTCAATTTCCAGGGCTATTT CTTTGGTCGCCCGGTTCCGGTCGCCGAGCTGGCGTGTTTTTTAGTCGCTG AATAA >Rfer_1021 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGAACTTCCACCTCCTTCATCTGCGCTCGCTCAAAACCAGAGTAACGCT CTTTACGTTGACCATTTTCATGGTCAGCATGTGGACGCTGGCCTTTAACA CCAACCGAATGTTGCACGCGGATATGGAGCGCGTGCTGGGCGAACGGCAA TTCGCCACGGTTTCCATGAAGGCCGAAGAGGTCAATGAGGAACTGGAGCG CCGCATGCAGGCGCTGGAGAATGTTGCCCACCGAGTGAGCCCGGCCCTGT TGGCCAATCCGGCGGCCTTACAGGCACTCCTGGAAGAGCATGTGATTCTG CAGAGCCTGTTCAACGGTGGCACCTATGTCACCCGCACGGATGGCACCGC GATTGCCAGTCTTCCGGTTTCAGCGAACCGAATCAGCATCAACTACCTTG ACCGGGATTACCTGGCCGCAGCCCTCAAGGAAGGGAGAACGATAGTTGGT CGACCAGTCTTAGGCAAGTCCATAAATGCGCCGATTCTCGGCATCGGGCT CCCGATTCGCGATACGAAGGGACTGGTAATTGGCGCCCTGGCCGGTGTGA TCAACCTGGGCCAGCCCAATTTCCTGGACAAGATTGCAGCCAGCCACTAC GGCAAGACCGGCGGCTACCTGCTGATTGCACCGCAGCACAATCTGTTTAT CACCGCCACCGACAAGAGCCGCATCATGCAGCCGCTCCCGGCCCCGGGCC TCAATCCGATGCAGGACCGGTACATGCAAGGCTTCAACGGATTTGGGACC GCCGTGAACTCGCATGGCATAGAAATGTTATCAGCGGCGCAGCGGGTTCC GGTCGCTGGCTGGGTCGCTATCGCCTTGCTGCCCACAGCAGAGGCTTTTG CCCCGATCAACGTCATGCATCAGAGGATGCTGCTGACGACCCTCTTTCTT ACCCTGCTGGCAGGTGCTCTAACCTGGTGGGTGTTGCGGCGCGAACTGTT GCCGCTGTTCAAGGCGGCACGCAGCTTGGCCACCCAGGCAGAAACAGACC AGCTCCCGCAGCCCTTGCCACTCACCAGACAGGACGAAACCGATCAACTG ATCAGTGGCTTCAATCGGCTACTGCAGACCTTGACGAGACGGGAAGAGTC CCTGAAGGAGAGCGAAGAGCAGCACCGACGGCTGATTGATAACAGCCACG ATGTGATCTACACGCTAACTAAAGCGGGGGTATTTACCTTCATGTCGTCG GCCTGGACCGCGCTGCTGGGGCATCCGCTCAACCAGGTCGTCGGGCAGAC AGTCTTTACTTTTGTTCATCCGGAAGATGTTGCCGTGTGCACGGCGTTTA TGCAAGGCGTAATGGCGACAGGGCAATCGCTAGAGGGCATCGAATTGCGT CTTCGCCACCTCGACGGAGGCTGGCGTTGGTTCCACACCAATGCAGTTCC GTTAAAGAACGAAACCGGGAAAGTCATTGGTTTACAGGGAAGCGCGATGG ACGTCACCGTGCGCAAACTGGCAGAGGAAGATACCCGCATCGCTGCTACC GCCTTCGAGTCACAGCAAGGCATGATCATTACCAATGCCGAGAAAGTGAT CCTGCGCGTCAACAAGGCTTTCACCGAGATTACCGGCTACACGATGGAAG AAGCTTTGGGCCAGACGCCAAGACTGCTCAAATCAGATCGCCATGACGCA GGCTTTTATGGCGCCATGTGGGCGAGCGTCGCGCGTAGCGGGTCATGGCA AGGCGAAATATGGAGACAACGCAAGAGTGGCGAGCAGTATCCAGAATGGC TCAGCATCAACGCGGTGAAAGACGCTGCAGGGCTGGTCACTCACTACGTT GGCGTCTTCAGCGATATCACTGAACGCAAAATATCCGAAGAAAAAATCGA TCGACTGGCCTTCTACGACGCCTTGACCGGCTTGCCCAATCGCCGACTCA TGATCGATCGGCTGCAGCAGGCCTTGGCCGCCACCGCCCGCCACCACTGC AAGGGCGCGCTGCTGCTCGTTGATCTGGATAACTTCAAAACCCTCAATGA CACCCTGGGCCATGACCAGGGCGATCTGCTACTGCAGCACGCCGCCAGGC GTCTGTCTGCATGCCTGCGCGAGAGCGACACCGTGGCCCGCGTAGGCGGT GATGAATTCATCGTGTTGATGGAAGACATGAGCCAGAGTGACCAAGAAGT TGCCACCCAGGCCAAGGCCCTGGGCGAAAAAATCATCGACACGCTCGGCC AGCCCTACCAGTTCGGCAGTTCCTCGCATTACAGCACCGCCAGCATCGGC ATTACCCTGTTTGACGGCGCTCAGCAGGAAAGCACCGAAGAACCCATGAA GCAGGTTGAACTGGCCATGTACCAGGCCAAGGCTGCAGGTCGAAACACCC TGCGTTTCTTTGATCCACAGATGCAGGCTGTGGTCACCGCTCGTGCTGTG TTGGAGAACGGCTTGCGAGAAGCGCTGGAGCAAAACCAGTTCCTTCTTCA CTACCAGGCCCAGATGGTCGGCGGGCGCCAGATCACAGGGGTTGAAGCAC TGGTGCGCTGGCGGGACCCGCGGCGCGGCATGGTGTCGCCGGTCGAGTTC ATTCCATTGGCAGAAGAAACCGGGCTGATCCTGTCGCTCGGTCAATGGGT ATTAGAAACTGCCTGCACCCAGTTGGCACGATGGGCGACCCGGGCCGAGA TGGAGCATCTGACAGTGGCGGTGAATGTTAGCGCGAACCAATTTCAACAG GGCGACTTCGTCGAGCAGGTGCTGGCAGTGCTGGAGCGCACCGGCGCCAA CCCGAATCGGCTCAAGCTGGAGCTGACCGAGAGCATGCTGATATCGAATG TTGAGGGTGTCATCGCCAAGATGAGTGCACTCAAAGGAAGAGGAGTGTGT TTCTCACTCGATGATTTTGGCACCGGCTATTCGTCGCTGTCGTACCTCAA GCGCTTGCCACTGGATCAACTGAAGATCGATCAAGGCTTCGTGCGCGACA TCCTGATAGATTCCAACGACGCTGCCATTGCCAAGATGGTGATCGCCCTG GCCGAGAGTTTGGGACTGTCGGTCATCGCTGAAGGGGTCGAAACCGAGGC GCAGCGCGACTTTCTGGCTGGTCTGGGCTGCCATGCTTATCAAGGTTATC TGTTTTGCAAGCCTTTGCCGCTGGAGGAGTTCGAGGCGTTTTTGCAACGG GCTTGA >Rfer_3397 two component transcriptional regulator, LuxR family ATGAAAACTAGCGCCCCCAAACCCTCGTTGGACCAAACCCTGGACCGTGC CAACAGCGACCTCGTGCTGATCGTGGACGACGTGCCCGACAACCTGTCGG TGCTGCATGACGCGCTGGACGAATCCGGTTACACCGTGCTGGTCGCCACC CATGGCGAGGCTGCCTTGCAGCGCGCCGCGCAAGCCTTGCCCGATATTGT GTTGCTGGACGCCATGATGCCCGGCATGGATGGTTTTGAGGTGGCGCGGC GCCTGAAAGCCGCGCCGCAAACCGCGCACATTCCCATCATCTTCATGACC GGCCTGCTGGACACCGAATACCTGGTGGCCGCGCTGGAGGCGGGTGGTGT CGACTACGTCACCAAACCGATCAAGCCCAAAGAAGTGCTGGCCCGCATGC AGGTGCACCTGCAAGGCGCGCGCGAAAAACGCCAGGCTAGATCCGCGCTG GACGCCTTTGGCTATGCCAGCATCACCGTGCGTGTGAGCGACGGCAAACT GATGTGGCAAACCCCGCTGGCACGCGAACTGCTGCTGCGCTACTACGGCA CCGAGGCGCCGAAAACGCCCGAGCCGGTCTGCCAGTGGCTGCGTCGCCAT GTGAATGATGCCGTGGCGCTGACCGAGCCGCCGCGCCTGAGTATCGAGCT GGGTCCGAAGCGCCTGACCTTTCGCCTGCACCAGCAAATCGGTGACTCCG AGGGCGGCGGCGACTGGCTCATCATCATGCAGGAGGTGTCGGACGAGAGC GTGATCGAAGCCATCGCCCTGAGCTTCAAGCTGACACCGCGCGAGGCCGA GGTGCTGTACTGGGTGGTCAAGGGTAAGATCAACCGCGACATTGGCGACA TCCTGGGCTCCAGCCCGATGACGGTCAAGAAACACCTGGAGCATGTGTTT GCCAAGCTGGGCGTGGAGACCCGCACGGCGGCGGCCGGCATGGCGATGAG CCGCATCCGCCAGCTGCATCCGCAATTTGAAGGATGA >Rfer_3626 diguanylate cyclase with PAS/PAC sensor ATGTTCCTCCAGCGCTTTCAGCCGCAGTCGCTCAAAACCCGCGTCACCCT GCTGACGCTGCTCATCGTGGTGCTCAGCTTCTTGTCGCTGGCCTCCTACA TGAAAGGGCTGCTGCGCGAAGAACTGCTGCGTTTTACCGGCGAACAACAG CGTTCAGCCCTGAACTTGCTGACCGCTGAAGTCAATCACGGCTTGCAAGA CCGGCTGGACATCCTGAAAACAGTCGCCTCAAGGGTCAGTCCGACGCAGG TGGACGACCAGGCCGCGATGAACGCTTTCCTGCTTGAACGGCCATTTCTG GCCGGGCTGTTCAATAGCGGCGCCATGATCTGGAACCGGCAAGGGGTGTT GCAGGCGAACATGCAATTCTTGAAAGACGGGCTTGTCGCCAACGCGCTTG ATCCGCAAGAGTTGGCCACGGTTCTCAAGGACGGCGAAGCTGTCATTGGC CGCATTCACTTTCACAGCAAGCCAAACGCGCCTGCGTTTGCCATGGCCGT GCCGATTCGCAACCTCCAGGGCGAGGTCATCGGCGCATTGGCAGGTGTTA TTCGGCTGGATCAAGCCAACTTTTTGAGCCAATTGGCCTCGCACCGTTAT GGCAAGACCGGCAACTTCTTTCTGCTGGACGCGCGCCAAAGGCTGATTTT TGCCACGTCCGACACACCGCGCTTGATGGAAGTCCTGCCCGCCCCTGGCA TTAGCCCCTGGATTGACCGTTTTGTGCAGGGTTTTGAGGGTACGGCACGG GTGGTCAACCCGCATGGCGTTGAGGTGCTGGTCAGCATCCGGCAGATTCC CCTGGCCCACTGGTACGCCTCCGTCACACTCGCGCCCGAGGAAACCTTTG CCCTGATTGAGGCGATCCAGCCACGCGGCCGGCTGGCCGCACTGGTGCTG GCCCTTTTTTGCTTGACCCTCATCTGGCTGATGCTGCGACGCCAGCTCGC CCCCATGACGGCGGCAGTCAACACATTGGACGGCTTTGTGCGCCACAACC AGCCGCCACAAGCACTGCCCGTGGTTCGGCAAGACGAAATCGGCCAATTG GTGGGTGGCTTTAACCGGCTGCTCGACACCTTGGCGCAACAGAAAAAAGT GCTGCAGGACAGTGAGATCTTCAAACAAGCGGTGCTCAATTCAGTGACCG CCGAAATTGCCGTGCTCAATCGCAACGGCGTCATTTTGACGGTTAACGAT GCCTGGCGGCGTTGTTCGCAAGCGTGTGCAGCCGAGCTCGGGCAGAGCGC AAGCAGCACCGAGGTGGGTGCCAATTACCTCGCAGCCTGTCAAAGCGTCG AGGCTGATCCCGCCGCAAGCGGCACACTGTCGGCGCAAGACGGCATTCAG GCCGTGCTGGACGGTCGCTCGCCGCGTTTCTACCTCGAATATACGTGCCA TTCTTCACAGCAACAGCGCTGGTTCAGCATGAGCGTGACCCCACTGCAAG GCGAGGCGCTGCAAGGTGCGGTGGTGTCACTTGAAGATATTTCCGAACGC ATCCAGATGGAAAAGCAGGTGCGTGATCTGGCTTTTTATGACCCCCTCAC CCATTTGCCCAACCGGCGCCTGGCGCTGGAACGACTGACGCAACAGCTGG TGCGCGCACGTCGGGCCCAAACTCGCCTGGCGCTGTTGTTTATCGACCTG GACAAGTTCAAGCCGATCAACGACGCGCTCGGGCACGAGGTCGGAGACTG GGTACTGCATGCCGTGGCACAGCGCATTCAGGCGTGCCTGCGCGAATCTG ATACCGCCGCGCGCCTGGGCGGTGACGAGTTTGTGGTGCTGCTGCCTGAC CTGCAAACCAGCGACGCGGCACTGGCGGTGGCCGAAAAAATTCGCGCTGC GCTGGCGCAGGATTTTGTGACCACCCAGGGTCTCGTGCTGAGCATTTCGT CGAGCATCGGCGTGGCGTTGTACCCGGACCATGGCGAGACCGAAAAAGAC TTGTTGCGTCTGGGCGATGAGGCCATGTACCGGGCAAAAAAGAGCGGATG CAATGCCGTGCAGCTGTGCGTGAAGCCATTGTCAGCGCCCGCCCCCGAGG CCTGCGACCCGGCGCCGAAGTCCCATGTTCACCTGCGCTGGAAAGCCGCT TTTGCCAGCGGCAACCCGGTGATTGATCAGGAGCATGAAACGCTGTTCCG GCTGGCCAACACACTGCTGGACGAGGCGGCATTGCGCCGGCAGCAGCCGG CCGCATTCGAGGCCGCGTTTGAGGCGCTGCTGGCGCACGTGGTGGAGCAC TTTGCGCATGAAGAAGCTATTTTGTTGGCGCACGGCTTTGCCGGCATGGC GGACCATGCGCGCCAGCATCAGGTACTGCTGGCGCGGGCACACGCGCTGC ACCTTTCAGCGCTGGCGGCAGATGCAGGGGATGCCACCGAGGGTGAACTG GTCAAATTTCTGGTGACCGAGCTGGTCGCGGGCCACATGTTGCACACAGA CAGCGCTTTTTTCCCCCTGTTTGCCACCCCAGGCGTTCAGACGCTGGCTG CACCGAAGTTTTCCGGCATCTGA >Rfer_1719 diguanylate cyclase ATGAGCACCTTGATCGAACACATTCTCAAGCTGACCGACCATCGGGATCG GGATTTGCTGGAACTCACGCTCTCCAAGGCGCTGATTGATCTGTTGCCGA TTCAGCGCATCGTCATTGCACGCGTGATGAGTGAGGAGGCTGAACAGCGC TGGCTGGAGGTGGCGCGGCTCGACGCCAGGGGCGGCGGCAAAGTCGTTGA TCCGATGCGGGTTGACTTCTTGACATTGGCCCGCCTGAACGATGCGACGG ATCGCCTGAAGTGTCTGTTGGGCCGTGAAATGATCGAAATAGCATGGGCT GGAGACGAGGGTCCGCGCATTTACATGCTCCCCCTGTTTTCTGATTCACG CAAGGATGATGCGGGCGTTATCGAACTTCACTCGGATTCGACCTTGGCCG CAGAACATCTTCTGATGGTCGAGCAATTGCGCCGTATTTACCGCAACATG TATACCTTGCTGGAGTACAGCGACCGCGATGCTCTGACCGGCCTGCTCAA CCGTAAATCCCTGGATGATGCTTTTTACAGTGCGGTGCTGGAAGAGCTTG ACGGTCTCGCCGGTGAGGCCCGAACGGCGGGCTCTCCCAAAGGACTGGAT CAGGAGCGTCGCCATCGGGTGCCGGCTAATTACTGGCTTGGCTCGGCCAT TGTTGACAACTTTGAACAGGTCGGCGAGAAGCATGGTCATCTGATCGCCG AAGAAGTGCTGCTGCTGGTAGCTCGTGTGATGAACAACACATTTCGCACT TACGATCGCCTTTACCGCTTTGGCGGTGAGCATTTTGGTGTGTTGATGCA TTGCCCCGACGAGGCCTTGGTGCTGGCTGCCTTTGAGCGTTTTCGTGTCA GTGTTGAAAAGTTCAATTTTCCGAAGGTCGGCCGGGTTACGGTGAGTTGC GGTTTTACCAATGTGCTGGCGGATGATTCACCCAGCAGCGCGCTGGAAAA AACAGAGCGTGCAGTCGATTTTGCGCAGCGAAGCGGCGGCAATAAAGTGT GCAGTCATATCGGCTTGGTGCGTCGAGGCTACTTTGGAGACGCGCCCAAG GTGGGGGCAGTCGACATTTCTTGA >Rfer_2737 response regulator receiver domain protein ATGATTGCAAAAACCAAAATTCTGGTGGTGGACGACGAAGAAGTCGTGCG GCTCAGTTATCTCAGAACCTTGTCAGGACAACACTGCAAAGTGGACGTTG TAGCAGACGGCAAAGATGCATTGCAGATGATGAGCCAACAGCCATTCGAT GTTGTTTTGCTCGATTTGCGTATGCCTGGAATGGATGGCATGACTGTTCT CAAGACCATCAAACAAAAATGGCCCGAGAGTGAGGTGATCATCATCACGG GGTATCCAGCCGTTGAATCTGCCAAGGCTGCGGTAACGCTGGGCGCCTAT GGCTATCTCGCCAAGCCGGTTGGTCCGGACGATGTCATCAACGCTGCCAA TGGCGCCATGTTGCATAAAAGATGGGCCTTGCGTTGCGACCAGCCTGCGC AATGTGCGGCAATGCGGTAG >Rfer_2400 periplasmic sensor signal transduction histidine kinase ATGCGCCTTCGTAGTCATTTGCTGCGCTGGCTGCTGATCCCCACGCTTGC ACTGTGGCTGCTTGGGTCGGTGATCGGTTACCTGCACAGCCTGGAGTTGG CACACGAGGCCTATGACCGTACGCTGCTTGGATCTGCAATGGCTATCAGT GAACAAATCACCGTTGTTGATGGTGACGTGGTGGCCGATGTTCCTTTTAC GGCACTGGAGATGCTGCGTACCGATGCTCAGGACCGCATCTTTTACCGCG TGACCGATTTGGGCGACGGCGGTTACATCACGGGCTACGAAGATCTGCCC TCCGTGGGCAGTGGAAGCAGCGAAGAGCCCAGGTTTTATGACACTATCTA CAAAGACCAAGCCATCCGCGTTGTGGCCATTGAAAGCACCGTGCTCGATG GCGATGCGCAACGCCATCTGCTGGTACAGGTGGCTGAGACCCTGGACGCG CGGCACCAACTCACCCGGAGCATCGCTGGTGACGCGGCGCTGGTTCAACT TATCTTGATCGCCACGGCCGCCAGCATGATTGCGCTAGGCGTAGCTAGGG GACTGTCTCCCTTGACGCGGCTGCAGGATGAGGTTTTGAAACGAACCGCC CACGATCTCACCCCGATTGAGACGGGCACCGTTCCCTTTGAGGTGGCGCC ACTCATCCATGCCATCAACGCCCACACCGAGCGGCAGCGCCAGTTCGGAG CGGCTCAGGTCCGCTTTGTTGCCAACGCATCGCACCAGTTGAAGACGCCG CTGACCGTGCTGCGTGCTCAGGTGGACCATGCCCTGCTGCAGACTGATCT GGCGTCGATGCGCGCCATTGTGAGCCATTTGCACGAAAGCACCGACGAGA CGGGGCGACTTCTTGCCCAACTGCTCTCCCTGGCACGCAGCGAAGCCCAA TACGCACGCGAGGTTCAAGACCTGGATTTAACCGATCTTGCTCACGAGGT GACCTTTGAGATGCTGACCCTGGCCCGCGGCAAAGGAATTGATCTCGGAT TCGAGGCTCCGTGCGCGGTGCAGGTGCAGGGCGAGCGGGTGCTGTTGCGC GAGATGATTGCCAACCTGGTGCACAACGCCCTGGTCTACACACCAGAGGG AGGCCGAGTGACCGTTTCGGTCGGCAGACAGGACGAGCGCGCAGCATTAT GGGTTGTTGATAACGGTCCGGGTATTGCAGTCGCCGAGCGACCTCGCGTG CTGGAGCGGTTCTATCGCATCGCCGGATCCCGGGAGCACGGCAGCGGACT CGGCCTGGCGATCGTGCGTGAAATCTGTGATCGCCATGGCATCGTAATGG AACTGGGCGACGCGCTGGACAGCGTGAGCGGACTTCGTGTCCAATTGGTG TGGCCCGGCGAAGTGTCTGACAATGAACGCGGCTACATCTCGAAGGCAAA TCATTTCAATGCATGA >Rfer_3654 diguanylate cyclase with PAS/PAC sensor GTGTTGGCAAGGGAGGAAAAAATCAAAAATACCGATGAGCCACTGGCACG TCTTGACGGCGGTGCGGACCCGCTGATTGCCGGGGCGCCGTCGCTGACGC TGGCGAGGTATGCAGTCGCGGCGGTGCTGATCGGCGCGGTGGCTTCCATG ATGGCGCTGGGTGTCCTGCTGCCAGAGGCGAGTGTGCGTACGGTCGGGCC GCTACTGCTGTTCCTGATTGCGGCCCTGGCTTGGTATCCTCTCTCTCGCG GCAAGATTAAAACCGCTGTCTGTGTGCTGACCTTCGGCGTCTGGGCCGTG ATGACAGGAATCGCTGTCTTTGCCGGGGGTGTGCGGGCACCCGTGGTCAT CATCTATCCCGTGCTCATTTTGATGTCGGGTTGGCTGCTCAACGCACGCG TAGCGATGCTGCTGACCGCCATGACCGTGCTGACAACTGTTGGTTTATTC CTGGCCGAATCCTGGGGTTTTCTGCCACCGCCGCTGGCCTCACCCGTTGT GATTTACTTCGGTGATCAAATTTTGATGTATCTCCTGTCGGCGGCGCTGG TGGTTTTTGTCTTGCGCGCCTACCAAAATCGCTTGCGCGAACTGCGCCAA GCCAGCAGCGATCTTGAGCATCGCACGCTTGCCCTGCAGGAGAGAAAAGC GGAACTGCACCGCGCGCAAGCGGTCGCCAAGGTAGGAAGCTGGGTTTATG ACATCGCGCAGGAAACAATGAGTCTGTCGGCCGAGGCCTGCCGCATCTTC GGGCTGGCCGAGGGCAGCAGCGTCAGTCTGGCCACCTACCTGTCGCAGGT TCATCCGGCTGACCGGAACGAGCTGGAGCACGCCTGGCAACGCGCATTGC AAGGTGATGCCATTGACCACACACACCGCATCCTGGTCGGCAAAACGGTG CGCTGGGTTCGCCAAAAGGCCGAATCAGGATTTGCCCCCGATGGGCTGAA GCGACGCGCCGTGGGCATTACGCAAGACATCACCGAGCTTAAAGAGGCGC AGGCGGCGCTGCAGGAAAGCGAGGAGCGCTACCGCACCATGATCGAATGG ACGCCCGAATCGATCCTGGTGCACCGGATGGGAAAAATTCTTTATGCCAA CCCGGCCGCGATCAAGCTGTTTGGCGCACCGGATGCCGCCAGCTTGTTGC GCAAATCAACGTCCGAGCTGATTCACCCGGACGATTTGAAATCGCAGACC GAGCGCATGAAGAGCATCAGTAACCATGTGCCCATCACACCCATGGTGGC GGCCCGGTTTCTCAAGCTCGATGGCCGTGTGATTGATGTTGAGGTGCAGG GCACCGCCATCATCTACGACGGCGAGCCCGCGATTCACGTTTGTATCCGC GACATCAGCACGCGCAAGCAGATGGAGGATCAAATTCGTCAATTGGCTTT TTTTGACCACCTGACCCTGCTGCCCAACCGGCGTCTGCTCACCGACCGTT TGAGCCAGGCGGTGGCCGCCAGCAAGCGCAGCAGCTGCTTTGCGGCCTTG CTGTTTCTGGATCTGGATAACTTCAAGCCGCTCAATGACCAGCATGGGCA TGCGGTGGGTGATTTGCTCTTGATGGAGGCGGCCGCACGGCTGATGAATT GCGTGCGGGGGGTGGATACGGTGGCGCGCTTTGGCGGTGACGAATTTGTG GTGCTGCTCACTGAACTGGATGCGAGGCACGCTGAGTCAACGGAGCAGGC CGCGATCGTGGCGGAAAAAATCCGTACCAGCCTCTCAATACCCTATCAAT TGACAGTCAAGACCAAAGAGCAAGTTGCCACACGAATCGAACACCACTGC ACCATCAGTGTGGGCGCGGTGGTTTTCCGGGGGCCAGAGAGCGACCCGGA CGACGTGCTCAAGTGGGCCGATACCGCCATGTACCAGGCCAAGCAGGCAG GCCGAAACTCGATCCGGTTTTATGCCAGTACCGAACAAGCGACTGGCCAC CGGTCTTAG >Rfer_1673 diguanylate cyclase ATGTCACAACTCGTTGATAAGTTAGCCGACCTGACCGACCTTCGGGATCG CGGTGCGCTCGACCTCGCCCTGGTCAGTGCCATTCATGACTTGTTGCAGC CGCAGACCGCAGCGATCTGTCGCGTTGTCGGTGAAGCCGGCAATGAGCGC TGGTTGACCACCGCCCAGATCAAGGCCGATCAACGGGTGCCCGTATTTGA CTCGGCTTGGTCCGATTTGCTGGCACTGCCACGTTTGGCTGAGTACCCGC TGCGCCAGCAGGCCGGCGTCGGCAAACTGGTGATGCAGTCAAGGCTATAT CCCGGCATCACGGTATTTCCGGTGAGCAGCAGCCCGGGTACGATCGGTGT GCTTGAAATCGCCACCCAGGAGCCGCTGTCTGAGGAACTGAGTCGATTGG TCAGTGGCGTGCTGCGCCTGTACCTCAATTTTCAAAGCCTGCTCGACTAT GGCGAGCGCGATGCACTGACCGAGCTGCTCAATCGCAAGACCTTTGATGG TGCCTTTCTCAAGGCAACGCTGGCGCAGCAAGTCGCCGTCGATGGCGCGC CCGACAAGCGGCGCGACACCAGCTGCAGTGGCAGCTTCTGGCTGGCGATG ATTGACATTGACCATTTCAAGCATGTCAATGACAACTTCGGGCACCTCAT CGGCGACGAAGTGCTGCTGCTGCTGGCACGCTTGATGCGCGTCAGTTTCC GCTTTCACGACCAGCTCTACCGTTTTGGGGGGGAAGAGTTTGTGGTGCTG ATGCGCTGCAATGGCGAGGCAGAGGCGGCTGCCGCGCTGGAGCGGCTAAG AACCAACACCGAAAATTACCTGTTTCCCCAGGTTGGCAGCATCACCATCA GCATCGGTTTTTCTGAAATCAAAACCGGCGACACCCCCAGTGGCGCCTTT GAGCGCGCCGACAAGGCGGTTTACTATGCCAAGGAGCATGGCCGCAACCA GGTGTGCAGCCATGCCGCCCTGGTTGCCAGCGGTGTGCTGGTGGAGCAGG CCGCCAACGTCGGCGACATGGAATTGTTTTGA >Rfer_0422 two component heavy metal response transcriptional regulator, winged helix family ATGAAAATTCTCATCGTCGAAGACGAACCAAAAACGGGCGACTACCTCAA ACAAGGTTTGGGCGAGGCTGGCTTTGTGGTGGATTTGCTGCGAGATGGCA CCGACGGCCTGCATCACGCGCTCACAGAAGACTACGATCTGGCGATTCTC GATGTGATGCTGCCTGGCATGGACGGTTGGGCGGTTCTGGCCGGTATCCG CAAAGCGGGCAAGGACATGCCGGTGCTGTTTCTGAGCGCGCGCGACCATG TTGATGACCGCGTCAAGGGCCTGGAGCTGGGCGCGGACGACTACCTGGTC AAACCATTTGCCTTTTCTGAATTACTGGCCCGCGTGCGCACGCTCTTGCG CCGGGGCGGCAAAGGTTCGTCCACGGAGTTTTTGCGCGCTGCCGACCTGG AGCTTGACTTGCTGCGCCGCCGGGTCACCCGCGCCGGCAAACGCATTGAT CTGACTTCCAAAGAATTTGCCCTGCTGGAGTTGTTGCTGCGCCGCCAGGA CGAAGTGCTGCCTCGCTCACTGATCGCGTCCCAGGTGTGGGACATGAATT TCGATTCCGACACCAATGTGATCGAGGTTGCCATGCGACGCCTGCGCGCC AAGGTGGACGACAATTTTGAACCCAAACTGATTCGTACCGTGCGCGGCAT GGGCTACGTGCTGGAGAGTCCCGCTTGCGCTTGA >Rfer_3549 cyclic nucleotide-binding domain (cNMP-BD) protein ATGGATTTGCCGCGGGGCCCCACTCAAAACCACCTTCTCGCGGCCCTGCC GGCCGCTGAGTTGGAGCGCATCGCGCCCCAATTGGAGTTGGTTCCCATGT TGCTGGGCGACGTGCTTTGTGAATCCGGTGGCCAGTTGCAGCACGTCTAT TTTCCAGCCACGGCCATTGTGTCGCTCCAATACACGACGGAGGATGGCGG CTCGGCCGAGATCGCGGGGGTGGGCAATGAGGGCATGCTCGGCGTTTCGC TGTTCCTGGGCGGCAACAGCACGCCCCACTGCGCCACGGTGCAGACGGGT GGTAGCGGTTACCGGCTGAAAACGCACTTGCTGCTGGAAGAATTCAATCG GGCTGGCCCGATGATGCGTTTGCTGCTGCGCTACACCCAGGCCTTGATGA CGCAGATGTCCCAAACCGCAGTCTGCAATCGGCACCATTCGGTGGAGCAA CAGTTGTGCCGCTGGCTGTTGGCAACGCTGGATCGTTTGCCCTCGACTGA GCTGACCATGACGCAGGAATTGATTGCCAGCATGATCGGCGTTCGCCGTG AAGGCATCACCGCCGCTGCCGGGCACTTGCAGCAAGCGCAGTGCATTCGC TACCGCCGCGGCCACATCACGGTGCTTGACCGCCAGGGCTTGGAGTCGCG CGTGTGTGAATGCTACGGCGTGGTGAAAAATGAATACGATCGTTTGCTGG GCGATGTTCGCCAGCGCTAA >Rfer_0904 MCP methyltransferase, CheR-type ATGCAACCCATCAGCGACAGCGAGTTTTCCCAGTTCCAGCACTTTATCTT TGAAGAGGCGGGCATCACCTTGTCCACTGCCAAAAAAGCACTGGTCACTG GGCGGCTGTCCAAACGCCTGGTACACCATCGGTTGGACAGCTTTGGCGAG TACTTTCGGTTGCTCAAATCGGGCCATCAGGCGCAGGAAGTACAGATGGC AGTGGACTTGCTCACGACCAATGAAACCTATTTTTTCCGTGAGCCCAAAC ATTTTGAGTTTCTGCGCAAGCAGGCGTTGGCCGCGCACAACCGGCCGCAG ATGTTTCGGGTCTGGAGCGCTGCCAGCTCTAGCGGAGAAGAGGCTTACAG CATTGCCATGGTGCTGGCCGATTGCCTGGAATCGACGCCCTGGGAAGTGA TGGGTAGCGACATCAGCACGCGGGTATTGGCGGGCGCCCAGCGCGCCCTC TACACCATGGAGCGAGCCCGCCACGTATCACCGGCCTATCTGCAACGCTT TTGTCTGAGGGGCCGCGATGAACACGAGGGTAGCCTGCTGGTGGACCGCC AGTTGCGCAGCCGCGTGCATTTTCGTCAGGTCAACCTAAACACCCCGCTG CCTGACTTGGGGTCCTTCGATGTTATTTTCTTGCGCAATGTGATGATTTA TTTCAACGAAGAAACCAAGCGCCAAGTGGTGGCGCGTGTGGTTTCAGCCC TCAAACCAGGGGGATACTTTTGCATTGGGCACTCCGAGAGCCTGAACGAC ATCACGCAGGCGGTGAAGGCAATTGCCCCATCCATTTATCAAAAGCCAGC TTGA >Rfer_1978 PAS/PAC sensor signal transduction histidine kinase ATGAATGCGCTGGCCAGACTGATGCTCGACAACAGCCCCGAGATGGTGCT GTTGGTCAACCCGGCAACACTGCAGATCATGATGGCCAACGCGTCGGTGG TCAAGACACTGGGCTACTCGCTGGCGCAGTTGCAGGGCTTGGCGATCACC GAGATTGAAAGTGCGCTACAGGATGTTTTTTATTGGGAGGACGTTCGAAC TGGCCAGTGTCTTGAAGTACAGAGTCAGGAGGGGCAGTATCGCTGCGCGC AGGGAGAACTTTTGACGGTCAGCAAGTCAATTCGGCTGCTTGACCAAGAC GGGGCGCCTCTGCTGCTGGTGCAGGCCGTGCAGACCCGCAATGAGCGCAA GGCGGAGGACGCGCTGGCACAAACCTTGTCGCAGTTGCGAGCCACGCTGG AGTCCACTGGCAATGGCATCCTGGTCATTGGCTGGCAAGGCCGGATCGAG AGTATGAACCGCCTGTTTGGCAAGATGTGGGAGATTTCTGACGATCTGCT CGACTCGCATGACGATGCGCGCATTCTGGGTTTTGTGGCCGGGCGTGTCA TCGAGTCCGGGCTGCTTCACGCGCGACTGGGTGCGATCGTGGACAAGCGC GAGACCGAAGACCTGCTGCACCACCAGGACGGTCGCGTGTTCGAGGTCAG CTCGCGTCCGCAGTACCTGGGTGAGCAGATTATCGGCCGCGTGTTTGGTT TTCAGGACATCACCCAGCGCACGCTGGCCGAAGCCGCATTGCGTGAATCG CGCGACTTGCTGGAACAAAGGGTGCGATCCCGAACAGCCGACTTGAATAC CGCCAATGAGACGCTGCAGCAGGAAAAGGAGCGCCAGGCCATTTTGATCA AGCGACTGGAAGAGGCGCAAAACCAGCTGCTGCAATCGGAGCGCATGGCG TCCATCGGCCAACTGGCGGCCGGCGTCGCGCATGAAATCAACAATCCGGT GGGGTTTGTCAACTCCAATCTGGGCTCCTTGCAGCGCTATGTCACCGACA TGCTCAGGTTGCTGTCGGTCTACGAGAAGGCTGAAGGCGCCCTCCCTGGG GCGGCGACGCAAGAGATAAACCAGGTCAAGGCGGACATTGATGTCGAGTT CCTGCGCGAAGACGTCGCCAACTTGCTCGTCGAATCGCTGGACGGGCTCA AGCGCGTCACGCGCATCGTGCAGGACTTGAAAGATTTTTCTCATGTGGAT GAATCAGAGCGCCAGTGGGCCGACCTGGAGGCCGGGCTGGAGAGCACCTT GCGCGTGGTCTGGAACGAGCTCAAGTACAAGGCCGAGGTGATCAAGGAGT TTGCAGGTATTCCGCAAGTCGAATGCTTTGCTTTTCAGCTTAACCAGGTG TTCATGAACCTCTTGATCAACGCCTCGCACGCCATTGAAGGGCGTGGCAC CATTGCCATCCGCACCGGGCACGACGACGCCTGTGTGTGGGTGGAAGTGC AAGACAGCGGCCGCGGCATCCAGCCGGAGCATCTGTCCCGGATTTTTGAA CCGTTCTTCACGACCAAACCAGTCGGCCAAGGCACCGGGCTGGGCCTTTC ACTGGCTTACGGTATTGTCAAAAAACACGATGGGCGCATTGAGGTCAAGA GCGAATTGGGACAGGGGACGGTGTTCAGGGTGATCCTGCCCAAGAAAACC AAGACACTATAA >Rfer_2271 PAS/PAC sensor hybrid histidine kinase ATGCCATCTGAACCTCCCAGCAAGACATCACCAGCCGACCGCCAACAGGA GTTTCTTCAGGCCGGGCTGGATCGAATTGACCAGGGCTTGACGGTTATTG ATGGCAACCTGCAACTGGTGGCGTGGAACAGGGCCTTTTTGCGGTTGCTG GATTTTCCCGAAGACATGGCGTATGTCGGCGCGACCTTTGAGTCGTTCAT ACGCTACAACGCCGAACGCGGCGAATACGGGCCGGGCGATGTGCAGGAAC TGATTGCCGAGCGCGTGCGGTTGGCAAGTCGTTTTGTCTCGCACTACACC GAGCGTGTCCGGCCGGACGGCCGGATTCTGGCGGTACGTGGCGACCCCTT GCCCGACAACGGCTTTGTGACGCTTTACACCGACATGACCGCCAGCCGAC GTCTTGAGCAACAGATCCAGCAGGACAACGCAGAGTTGGAGGATCGCGTC ATCCAGCGCACCGCCCAATTGACGGCAGCCCAGCAGCGCCTGACCGAGGC GGATGCGGCCGCGCAGCGCATCACCACCGCCTTGCGCTGCAGTGAAGAGA ATTTGCGCTTGATCACAGATACGGTGCCCGCGCTGATTGGCTACTTTGAC CAACAGGAAATCTACAGCTACACCAACAAAGGCTATTCCGACTGGTTTGG GTTCACCAAGGAGGAAATGGTGGGCCGTTCGATTCATGACGTGGTTGGAG ACGAGGTTTACGCCAGTGTCTCGACGTATTTGCACCTGGCACTGAGAGGG CAGCAGGTGAGCTATGAGTACGCCATGCGCCGCCCGGGTGGGCAGGTGTT CTATGCGCGCAGCGAATTGGTCCCGGAAATGGACGCCGAGGGTCGCGTGA TCGGCTGTTTTGTTCTCTCAGTCAACATCACCGATCTCAAGAATGCGCAG TCGGCTCTAGTTCATGCACAAAAGATGGAGGCGGTGGGACAGTTGACAGG CGGGCTTGCGCACGACTTTAATAATTTGCTGACGGTCGTGATCGGCAATC TGCTGACCCTGCATGAGCGCTACCCCAACGATCCGGATATTTGCGAATTT GTGGTGCCGGCGCTGAAGGCGTCGCGCCGGGGTGCGGCGTTGATCAAGCG CCTGCTGGCGTTCGCATCAAAGCAGCCGCTGGCGCCGAGGTCCGTCAATA TTGAAGACCTGGTGGCCGACACCATGATCCTGCTCAAGCGCACGCTGCCG GCGCATATCAGCGTGACCAGCATTCCCATGGATGAGCCCTTGTTCGCGAT GACCGATGCGCAGCAGCTTGAAAACGCACTGCTCAACCTCGCGCTCAATT CGCGTGACGCCATGCCCGATGGTGGGCAACTGGTGATTCAGGCGCAGCGC ATGCAGTTGGACCTGGCGCACGTGGCTGATTTCGACGTTGCACCGGGCTG CTACGTAGCTTTGAGTGTTTCCGACACCGGCGCCGGCATGGATGCCGCCA CGCAGGCCCGCGCCTCGGATCCGTTCTTCACCACCAAACGCTTTGGTTTG GGAAGTGGTTTGGGCTTGTCCATGGTCTATGGATTTGCCAAACAATCTGG TGGCGGTATTCGCATTCAAAGCGCATTAGGCGAAGGCTGCACTGTCACGC TGGTGCTGCCGTATGTCTGTGACAAGCTCGAGCTTGACGCGCCGATGGGC GCGCAGTATGGCTCGGGTCAACGCGGCGCGGAGCACCCCCTGGTCTTGCT GGTGGAGGACGACCCCGACGTGCGCCGTGTCATCCGGCTACAACTCGTCG ATCTGGGCTACCCGGTAATCGAAGCGGACCATGCGGCTGATGCCCTGGAT CTATTGTCGACCGTTCCATCCGTGGGCATACTGATCTCCGACATGGTGAT GCCCGGCAGCATGGATGGACGCACGCTATGCTGTGAGGCGAGCCTGAGTG CACCGAATGTGAAGACCTTGTTGATCAGCGGCTACGCCATGTCGCCCGAG AATGCGATCGGTCCACCGCTGTTGAAGAAGCCATTCACCGCCGTCGAACT GCAACGGGCCCTTGATGGTTTGATGTCATGA >Rfer_2738 response regulator receiver domain protein ATGAGTGCACTGCGTAAAATTTTGGTTGTGGATGACGATCCTGTGGTTGG CAAGAGCTTCAACCGGGTGCTTTCTCAGGACAAAGGATATGTGGTCATCA CCGCCGAGAATGCCGCCGAAGCGCTGGAAAAACTGCACGAGCAAGAGTAC GACCTTGTTTTCACGGACATCAAGATGCCCGGCATGGACGGCGTCGAGTT GGCCGAACACGTCAAGGCCAGTCGGCCCTGGACACCCGTGGTCATCATCA CCGGCTACGGCACCGCTGAAAACGAGGTGAGAGCCAAGGCAGCGGGCGTG TCGGACTTCATGCGCAAGCCGCTGTCACCGGAGATGATTGAAGAAAGCGC CGCACATGCGCTGCTCCAACCCGCGCTGACCGTCGTTCCAACGCTGCAAG CGAGCCCGGTCGAACAGTCGCAGATCGAAGTGCTGGAGGAAAAGAGCAAC TTCAGGAACATCGCCCTGTTTCTGGCGGCGCCGTTCATCGGCTTGGCCTA TGCAGTCATGCTTCCACTCGTTGGCACCGGCATGCTGGTCTGGATGGGAG CGCAGGCCTTGATGAAGAAGTCCCGTCCGGAGTAA >Rfer_2864 sigma54 specific transcriptional regulator with GAF sensor, Fis family ATGCGCTGTGCAGGAGACAACGTGCAACCCACACTCCATGACGCGGTTTT GCGGCAAGCCCGCATGCGTTTGATTGAGCATGGCGACTGCCCGGCCGATG GCATTGATGCCCGCCTGGCGCGTTCATGGCAGCGCAGTCTGGCGGCGGGT CTGTCTCCCCTGGACCGCGTGGCGGACTCCGAGCATGCCAACGCCATCGA CTTGCGCCGGATACTGACGCGCAACCATGAACTGCTGGCGCATTCACGCC CGGTGATGGATTATTTGTTTGACCAGGTGCGCGGCAGCGAAGGCATGGTA ATTTTGGCGGACCAGCGCGGCACTTTGATGCGCACTTTGGGCCATCCTGA TTTCTTGAACAAGGCCCAGCGAGTGGCCTTGACCAGCGGTGCGTCGTGGC TGGAGCAGCATCGCGGCACCAACGCCATTGGCACTGCGCTGGCCGAGCTT GAGGGCGTTGAAATCCACGGCGCCGAACATTTTTTTGAGCGCAATGCTTT CCTGAGTTGCACTGCCGCCCCCATCGTGTCGGCGCGCGGTGAATTGCTGG GCATTCTGGATATTTCAGGCGACCAGCGCAGCGATCACCCGCACACGCTG GGGCTGGTCAACATGGCCGCGCGCATGATTGAAAACAGCCTGATGCTCGA CGCCAGCCGGTGCCAGACGCGCCTGCACCTGCATCCGCAGCGGGAGGGCA TTGGCACGGTGGCCGAGGGCATTGTGACGCTGTCGGACGACGGCTGGATC GTTGGGGCCAACCGCAATGGACTGGCTTTTTTGAAACTCGCAACACGCGC CTTGGGTGCGGTGCAATTGACCCATGCGATGGACGTGCGCCTGAGCGACT TGCTCTCGCGCCCCTTGCGCAGCCCCGATCAGCCCAGGCTGGTTCGCCTG TGTGATGGCACTGAACTGTATGTGCTGGTGCAGGTCGCGCAGGGCGCGCT GCAGATTGCCTTGCCAGCGCTCGTCATGCCGAAACTTGACGATGCGCTCA CGCAACTCGACACCGGCGATGTGCGCTGGCGCAGTGTCACCGACAAGGTG CGCCGGGTGCTGGACAAGCCGATCCCTTTGTTGATCCAGGGCGAATCAGG GGTTGGTAAAGAGCTCTTTGCCCGCGCCGTGCATGACAGCGGCCCGCGTC GCAGCAAGCCTTTTGTGGCGATCAATTGCGCGGCCGTGCCTGAGAACCTG ATTGAGGCCGAGTTGTTTGGTTATGCGCCAGGCGCGTTTACCGGTGCACG GCGCGAGGGCAGCCCTGGCCGCCTGCGTGAAGCCCATGGCGGCACGCTGT TTCTGGATGAGGTTGGCGACATGCCGCTGGCCATGCAGGCACGCCTGCTG CGTGTGTTGCAAGAACGCGAGGTCAGCCCGCTGGGTGGTGGTTCGGCGGT GGCGGTGGACTTCGGCCTGATTTGCGCCACGCACTGCAAACTGCGCGAAG CCACTGAGCTGGGGCGCTTTCGCAGTGACTTGTATTACCGCCTCAATGGA TTGACGGTGCAACTGCCGGCCCTGCGTGAGCGCACGGATTTTGCGGCGCT GACCCAGCGGCTGCTGGCCGGCCTGAACCCACAGCGCAACATTCACGTGG CCCCGGCGTTGCTGGCGCGCCTGAGCGCCTACGCCTGGCCCGGCAACGTG CGCCAATACGCCAATGCTTTGCGCACCGCCAGCGCCATGCTGGAGCCACA TGAGCTGTGTATCGACTGGGCGCATTTGTCAGATGATTTGCAGGAAGATT TGGCGGTGCAGGCGGCACCGACTGCACCTCAAACGCGGGCCGCCATGTTG TCCACGGCGGCCGAGCCCTCGCAGAACCTGAGCCAACTCTCGCGCACTGC AATCTGTCAGGCGCTGGACGGCAGTGGCGGCAACATGTCGCAGGCGGCGC GGCGTCTGGGCATCAGCCGCCAGACCCTTTATCGCAAGTTGGCGGCCTTG AAATAA >Rfer_3638 metal dependent phosphohydrolase ATGGATAGAAAGCCGTTTCCTGTTCCCGAAAGCTTTTCTGCCGCCTGCTC AGAATGCGGCGCAGTCTCCCATGGGCGTCTCTATTTGCGGTCCGGCGACC AAAACACCTGTGAGAATTGCCTCCTCGATGCCCGCAAACATCTTGGTGGT TGGGGCGGGCACCCCTATGAATTGTTCGTCGAAGCAATTGCCGAGGCGAT GGATTTAAGGGAAAAAGAGACTGGCCTGCATTCCAAACGTGTGGCGGCCC ATACTCTTTTGCTGGCAAGACACCACTATCAAAAAGCTAAAGATCTTCAG GAAGTGTATTGGGGCAGCCTGCTCCATGACATCGGAAAAATCGGTGTACC TGATGCGGTGCTCTTGAAGCCCGGCAAGTTGTCCGATCAGGAATGGCAGA TCATGCAAGAGCATCCACGCAACGGGCACCTCATCTTGGAAAAACTCCCG TTCCTGTCGATGGCCGCAGATATTGTTCTCTGTCACGAGGAGCGGTTTGA CGGATCAGGTTACCCGGCGGGACTCAAGGGAGAAGCAATTCCTTTGGCGG CGAGACTCTTTGCCGTCATCGACACCCTTGATGCGATGACCTTTGATCGC CCATATCGTAAGGCACTGCCTTTCGAAACAGCACGGGCGGAAATACTTCG CATGGCCGGAACCCAATTTGATCCGCAGGCGGTTGACACGTTTCTTCTTG AGGAGTCAGCACTGCGGGAGGTGTCGGAGATGGAGTTTCTCTCGGCACAC AGGACATAG >Rfer_2401 two component transcriptional regulator, winged helix family ATGAAAGTATTGCTGATTGAAGACAATCTGCAGCTGGTGCACACCCTGAC GCAGTCGTTTGGCATGCTGGGCATTGCGGTTGACGGCCAATCGGATGGCG CTTTGGCTGACGCAGACTTGCACAAGCACGCGTACGATGTTGTCATTCTC GATCTGGCGTTGCCGAAGATGGACGGCTTTGAGATTCTGCGCCGCTTGCG CGAGCGCGGCGATACCGTGCCGGTGCTCATACTGACGGCCAGTGGCGATA TTTATGATCGGGTGCAAGGCCTGAATGCGGGTGCCGACGACTACCTTCCC AAGCCCTTTGATTTGACTGAGCTGGAGGCTAGATTGCGTGCATTGTATAG ACGCAGTCTTGGGACGGCGCACTCAGTTCTGCGTGTCGGCCGGCTGGAGT TCGATACGGTATCGCGGCGCTTTAGCGTGGGCGCGCGCCAGTTCGATGAT CTGCCACCGCGCGAGCACGACTTGCTGGAAATTCTGATCGCGCATGCGGG TCGCCCGGTCAATAAAAATGTGATGGCGACCCGCCTCTGTACCAGCGATG TTGTGCTGAGTCACGATGCGCTGGAGATTTATGTACATCGTCTTCGGCGC AGGCTCGATGGCAGCGGCGCGGCGATCCGAACGCTACGTGGGTTGGGCTA CGTTCTGGAGGCTTGCGACGATGCGCCTTCGTAG >Rfer_3950 two component transcriptional regulator, winged helix family ATGCGAATTCTGATTGCCGAAGATGATCAGGTACTGGCTGACGGCCTGCT GCGAACCCTGCGCAGTTCGGGCGCCGCCGTCGACCATGTCGCCAGCGGAA CGGAAGCCGACGCCGCGCTGATGACCAACACCGAATTCGACCTGTTGATC CTGGACCTGGGCCTGCCCAAAATGCACGGACTCGAAGTCTTGAAGAAACT GCGCGCCCGCGGCTCCGCGCTGCCGGTGCTGATCCTGACCGCCGCCGACG GCGTGGAAGAACGCGTCAAAGGGCTGGACCTGGGCGCCGATGACTACATG GCCAAGCCCTTTAGCCTACATGAACTTGAAGCACGGGTACGCGCGTTAAG CCGCCGCGGCATGGGCTCGGCCAGCAGCACCATCAAGCACGGCCCCTTGA TTTATGACCAGTCCGGCCGTGTCGCCACCATCGACGGCGTGATGGTGGAG CTGTCGGCCCGTGAGCTCGGGCTGCTCGAAGTGATGCTGCAGCGCGTCGG CCGTCTGGTGAGCAAGGACCAGCTGGTCGAGCGACTCTGTGAATGGGGCG AAGAGGTGAGCAACAACGCCATTGAGGTCTACATCCATCGTCTGCGCAAA AAAATTGAAAAAGGCCCCATCCGCATTGCCACGGTGCGCGGCCTGGGCTA CTGCCTGGAAAAAATTCCCAAATAA >Rfer_3241 diguanylate cyclase ATGCGTTATGGCATCGGTTTCAAGCTGGGGCTTTTGCTGGCCAGTTTCAG TCTGGTGGCGATGGGAATCGTCGGTTACTACTCGTACGCCAGTGGCCGTG CCACCTTGCTGGCGGCCGCGCAACGTGATTTGCTGACGGCGACCCACGTG CTGGGGCGCAACTTTCAGGCCAGCATCGACGCAGTGGCCAGGGATACCTT GCTGCTGGCAAGCCTCCCGGCAAGCTCTGCCATGGTCACTAGCCCTGAGA GCATGCCAGCGGGCCGTGACCCAAAGGGGTTGAGCGATACCTTCGCGGCG ATGATGGCGGCGCATCCTGAATATTTCCAGATTCGACTGATTGGTGCTGA CCAGCACGGCCTGGAACTGGTTCGGTTGGACCGAGACGACGGCAAACTGG TGCCGGTACAAGCAGACAATCTGCAGGAAAAAGCCCATTACCCCTATGTT TTCAACACCTTGCAACTGGGCAGGGGGCAAGTCTATTTGTCGGACATCAC GATCAACCACGAAGAAGGGGCGCATTCCGGGTTGCACAAGCCCACCGTCC GGGTCGCCTCACCCGTGTTGGACGACAGCGGGAAAGTGCTGGGGCTGATC GTGATCAACGTGGATCTGAACGGCCTGTTTGACCGCCTGAAGTCCGATCT GCCAAGCGCCTACCAGTTGTACCTGAGCAACCATTGGGGCGACTTTCTGA TTCACCCCAACCCGGCCGAAGCCTTTGGCTTTGACCAGGGACGCAGAATC TTTATTCAGGAGTCTTTCGAGCCGGTTGCGGCCTTGATTAACGGCACGAG CGCCAGTGTGGTTACCAATATTGACGCCGTTCAGCAAGCTGGCAACGGGC TGGTGGCCGCTTTTATCCGCATGCCTTTTGGTGGCTCGGTCCAGACGGAT TTTGTGATTCTGGGACTGTCGCAGCCGCTGGAGAACGTCGTGCGGGAAAC GTCGAAGCTGGGTTGGAACACCGTTCAAATTATTCTTGTGCTGGGGGTTC TTGCCATACTTCTGGCGGCGCTGGTTTCGCGCGCCGTGATCGGCCCCCTG CGGAAAATGGTTGATGCGATGAGTGCCTTTTCAAAAGAGCATGTGGTCAA CGAATTGTCGGCCGCCCGCAAGGACGAAATCGGGCTGCTCGCCAGCAGCC TCAACGACATGCAGAACATCATTGTGGCGAACATGCGCGATTTGAAAGAG AGTCGGCAAGCGCTTGAGCATCTGGCCCAACATGATTCACTGACCGGTTT GCCCAACCGCGCACTGTTTGACGACCGGCTGCGTCAAGCGGTCTCACAAG CGCGGCGCGACAAGACGCGCATGGCCCTGCTGTTTGTTGATCTGGACGCG TTCAAGGACATCAACGACACTTGCGGCCATCACGTTGGGGACTTGCTGCT GAACGCCGCTGCGAAACGGATGCAGGCCTGTGTGCGCCATGCCGATACGG TGGGGCGCATGGGGGGTGACGAGTTTGTCGTGCTGCTGACCCATGTCGAG GAGGACCAGGATGCCGTGCTGGTCGCTGAAAAAATATGCAAGGCCCTCAG TCAGCCTTTTGATCTTGATGGCCGCAGTTTGTTGATTGGGTCCAGCATCG GTGTGGCCCTCTACCCAGAACATGGTAGTGACGAGCTGACGCTGTCGCGC AGTGCCGATGCCGCCATGTACCTTGCCAAAGAGAGCGGTGGCAACTGCGT CAGTCTTTTCGGGTCTTGA >Rfer_1091 two component transcriptional regulator, winged helix family ATGTCCCATTTGCTGATTGTTGAAGATGACGAGTTGCTGCGCGATGCCTT GGGTGCTCAGCTGACCCAGGCCGGTCACACCGTCACCCCTGCCAGCGACG GTGAGCGCGCGCAGGCCTTGCTGGAGTCCAACCGCTTTGACGGCGTGATT CTGGACCTGGGCTTGCCCAAAGTCAGTGGCATGGAGGTGTTGCGCTGGCT GCGCAAACGCCTGCCCGCGCTGCCGGTGCTGGTACTCACCGCGCGTGACG GTGTCGAGGACCGGGTGCAGGGGCTCAACGCCGGGGCCGACGATTACCTG ACCAAGCCGTTCAGCATGGCTGAGCTTCAAGCCCGCCTGGGCGCCATGCT GCGGCGCGCCAGGCTGCCCGCTTTTGGGGGTTCGCTGGAACTGGTCACCG ATGGCGCGCGGCGTCTGCGGGTGGATGCCAGATTGCCGCAAGCCTGGCTC GGCGATGAAGCGCTGGAACTGACGCAACGCGAGTGGGCGCTTTTGTCCCT GCTGGTCACCAACGCGGGGCAGGTGATCAGCCGTGAAGATGTGCTCTGTG CATGGCAGTCCGAGCCCGGAGACGGTACGAGTACCGGGGCCAGTGCCGGT GTGGGCTCGAATGCGCTGGAGGTCTATATCCACCGCCTGCGCCGCAAGCT GGCCGACTCCGGGCTCAATATCCGCAACGTGCGCGGCCTGGGTTACATGC TGGAGTCCAGTGCGCCGTGA >Rfer_3768 transcriptional regulator, LuxR family ATGAGCACCCAACACCTCTTTCTCTCCAGCCCGGTCGCACCCCTGCCAGG GCGCCTGCGCGAGGCGTTTCCGGATGTTCAGGCGCTCGACGCCACTGTCA TGCAGACGCGCCTGCCCTCTCCGCCTGCAGCGCAGTGCCTGGTCTGGTTG AGCAATGCCGATGTGCAATGGGCGCGTAATCTGCGTCAGATTTTGCAGAC CCAGCCTGACGCCCGCGTGGTGCTGCTGTCCAGCATGCCCGAATCAGATG AAGGTCTGCGTGCCCTCAACGAGGGCGCGCGTGGTTACACCCATGCTTAC GGCGTGCCCGCGTTGCTGCAGGAAGTCGCGCTGGTCATCGAACATGGTGG CCTGTGGGTGGGGCCAGACCTGCTGCAGCGCCTGGTGGGCTCGACCAATG TAGCGCTGGCGAGCCGCCCGGCAGCTGCAAAAGCGCAGGTGCCTGTTACA GCCTCATCCAGTACTAACGCATGGTCCACTCTGTCAGCACGCGAGGCACA AGTGGCGCGTTCAGTATCGGCGGGGCGCTCCAACAAGGAAGTTGCCTCCC TTATGTTTATTTCAGAGCGCACCGTCAAAGCCCATCTGGGCGCCGTGTTT GAAAAACTTGGCGTGCGTGATCGTCTGCAGCTGGTGCTGCGCCTGTCAGC CGCCGTTGAACCTGTGCCAACATCCCCAATGGAGCCCGCGCCATGA >Rfer_0510 two component transcriptional regulator, winged helix family ATGACTCAACACCTATTGATGATCGAAGATGACACGCGCCTGGCCCAGAT GGTGAGTGAGTACCTGGCGCAATCAGGGTTTGTGGTGGGCCATGCCGGCG ACGGCCAAACCGGGCTGACCGACCTGCAGTCCGACCCACCTGACCTGGTC ATCCTGGATCTGATGCTGCCTGACATGGACGGGCTGGAGGTGTGTCGGCG CATCCGCTCACTGCCCGGCGCCCTGGCGCAAATACCGGTGCTGATGTTGA CCGCCAAGGGCGACCCGATGGACCGCATCATCGGGCTGGAGATCGGCGCC GATGACTACCTGCCCAAGCCGTTTGAGCCACGCGAGCTGCTGGCCCGCAT TCGCGCTGTGTTACGCCGCCATGTGGAGGGCGCGCACCCCGTTCAAACAC AGCTGCGTTTTGGCACACTGGAAATCGACCGCGACGCCCGCTCCGTCAGT GTGGCGGGCCAACTCTGCGACTTGACCTCTTACCAGTTTGATCTGCTGGT GGCGCTGGCCGAGCGCGCCGGGCGGGTGCTCACGCGTGACCAGATCATGG AAGCCGTGCGCGGACGTGAACTCGACGCCTTTGACCGCTCGATCGACGTG CACATGGGACGCATCCGCGCAGCCATTGAACTCGATGCCAAGGATCCCAA GCGCATCCTCACGGTGCGCGGCGTCGGCTATGTATTCGCCCGCCAGCAAG ACTGA >Rfer_1981 metal dependent phosphohydrolase ATGAACCACATCGTGATGGATGACGTGCTGGAAAGAATCCACAACCTGCC CTCGCTGCCAGTGGTGGTGATGGAGTTGTTGGCGTGCATGGGCCAGGACG ATGCCAACATTGAGGCACTGGCGGAAAAGATCACAAAGGACCAGGCCTTG TCGGCCAAGACCTTGCGCCTTGCCAATTCATCCTTTTATGGCATGGCGCG CCAGGTCACCACCATCCAGGAAGCCATTGCCATCCTGGGTTTCAGAACGG TGCGCAGCCTGGCCGCCACAGCCGCCCTGATTGGCAACTTCTCCGCCAAC CCTGGCAACAGCTTCGATTTCACCCCGTTCTGGCGCCACGCCATTGGGGC TGCCGTGTGCGCCCGGGAACTGGCGCCCCACCTCCATCTCAACCCGGACC AGGCCTACACCGCAGGCCTGCTGCACGACATTGGGCGCTTGGTGTTGGTC ACGCAGTTTCAGCCGCAGTACCGGGCCACCATGACGTACCGGGCCGAGCG GGATTGCCATCTGCTGGATGCAGAACACGCCGTGCTGGGCCTTGACCACG CGCAGGTGGGCCATGCGCTGACGCAGCTCTGGCAGTTCCCGCTGAGCATG CAACAGGCGCTGGCCGAGCACCATGCGCCCAGCAGCCTTGGCATGCAGCC GCTCTCGCTGGTGGTGATGGCCGCTGACGCCATTGCCCATGCGCTGGACT TGTCGATGGACGCCGACGACCTGGTTGCGCCTGTGCCGCCGGGTCTGTGG CAACAATTGGGTCTGGATGAAGCGACCCTGCTGCAGGTTTTTGCGAGCGT CGAACAACAGTTCGACGCCACCAGCCTGCTTTTGAACGGCTGA >Rfer_2018 phosphohistidine phosphatase, SixA ATGGACCTGATCTTATGGCGTCACGCGGAGGCGCAGGAATGGCTGGAGGG TTGTGACGACATGGCCCGTTCACTCACTTCGCGCGGCGAAAAACAGGCCG CACGCATGGCGAACTGGCTCGACCGTCAGTTGCCCGAAGGGACGCGTATT TTTGTGAGCCCGGCACGCCGTTGTGAGCAAACTGCGCAGGCACTGGGACG CAAATACAAGTTGCGAGAAGAACTGGCGCCGGCCGCCAGTGCCGACCAGT TGCTGGCGCTGGTTCAGTGGCCGCTTGCAAAAGGCACCGTGCTGGTGGTG GGTCATCAACCTACGTTGGGCCAAACCATCGCCCAGTTGCTCGGTTTAAG CGCGCCCGAATGCGCGGTCAAAAAAGGGGCGGTCTGGTGGCTGCGCAATC GCCAGCGCGAAGCACTGTCCCAGACTGTGGTCGTCGCGGTGCAGTCGCCC GAGGTCATTTAG >Rfer_1538 putative PAS/PAC sensor protein ATGGAGACACCTCTTTCTGAAGACACCGCGCGCAAGCTCGATATTGGCTA TCGGCTGCTGTTTGAGAAAAGTCCGCTGCCGATGTGGGTTTATGACGTGC AAACACTGGGCATGCTGGCCGTCAACGACGCCGCCCTGGCGCAGTATGGG TACAGCAAGCAGGCGTTTGTCGGCTTGAGCGTGCTTGACCTTCATCCGCC AGACGAAGCGGCGCAAGCGCAGCAACACCTGCAACTGGCGAGTGGCGAGC CCGTAACCCAGACACTGTGGCGGCACCGGCTCGCCAATGGTGACCTGATT GACGTCGAGGTGGTGACCGAATATGTTGAACTTGACGGCATCCAGGCGCG CCTCGCGCTGGTGCGCGATCTGACGGCGCAGCAGCGTGCCAAGCAGCAAC TGCAAGAGGAGCACCAGACACTGGCTGCTGTGCTGGACTCGACCACCGAT GCCATCATCAGCATCACGGTTGAAGGCTTGATCAAAGTGTTCAACCCTGG CGCCGAGCGCATCTTTGGTTACAGTCGTGAGCGAATGCTGGGTCAAAACA TGGCACTGCTGTTGCCTGAACGCTATCGGGCCGAGCATCCGCAGCAGCTG CGCTCATTTGCCGACTCCGGGGCGACCAGCCACATGATGGGCATGGGCGT TGTCAAAGGCTTGCGCGCCGACGGCCAGGAACTGGACCTGGAAGGCACAC TCTCACAGGTGATCGTCCACCAGGAGCGGCGGCTGATTGCCTGCCTGCGT GATGTCACGGAGCGCGCCCGCTCGCAAGCCAAATTCCGGCAGTCCAGGGC GCAACTCTCGGAGCTGACGCAACGGCTCATGACGCAGGAAAAAACATTGG TGAAGCAGTTGGCCAAGACGCTGCATGACCAATTGGGCCAGACACTGGCC GCGGTTCGCATGGCGCATGAAACCATTCAGGCCGTGCAACCCAAAGATAC CCCGGTCGCCGTGCAGAGGCAACAGGCGCAACTGGGCAAGCTCGTTGGCC ATGCAATCCAGCAGGTCAGGCAAGTGCTGGTTGATTTGCGTCCCCCCTTG CTGGAGGACCAGGGGCTCGTCGCCGCGCTCGACAATGAGTTGCGCAACCG TTCGCTGACCCAACCCCAGATCGACTTCTCGATTGACGTGCCGCCGGAGA TTGAGCCGATGCGCTGGCCCGGTGAGGTTGAATATGCGGCCTTCATGGTG GCCCGCGAGGCACTTGAAAACGCCTTGCGCCACGCGAACGCGTCGGCCAT CGCGGTGCGTCTGGTGGGCACGCAGCAGTCATTGCAGTTGCAGGTGTCTG ATAACGGGGTCGGCATCCCGGCCGGCGCCGCTGTTCCAAGTGGTCACCTG GGGGTATTCGGTATGCACGAGCGGGCGCAGGCGATTGGTGCGACGGTGAC GGTGGGCGCCGGTGAAGGCCGTGGTACATGTGTAAGTTTTTATTGGCAGC CTGAGCCTGATTCTGATTCTGAATGGGGTGCCCTATGA >Rfer_0247 two component, sigma54 specific, transcriptional regulator, Fis family ATGCCATCTCTGAACGTTTTAGTTGTTGACGACGAACCGGCATTGCGCCA GATTCTTGCTGCCGCAGTGATCAAAGCTGGCTATTCGGTGGAACAGGCCA ACGGCGTAAAACAGGCCGCGACGATGCTTTCCCGCGGGGACTTCGATGTG GCACTATGCGATATCAAGATGCCCGACGGCAACGGTATCGAACTGGTACG CAATTGCCGTGCCGCCGGTATCGAAACGACGTTTATCATGGTTACGGGAT TTGCTTCGATCGAAACGGCTGTCGAAGCGCTGCAGGCCGGGGCGTCGGAT TACATCACCAAGCCAGTACGCTATGAAGAGGTGGCGCACAGACTTTCTCA AATCGACGCGTTGCGCGGCTTGCGCGAAGAAAATAAGGCCTTGCGCAAGG TTGTAAGCGATAGCTCACCCAAATTGTACCGATTCACCTCGCCCGGAATG CTCGAAGTAGAGAGACTAGCGGGAAAAGTAGCGCCCACTGACTGCACGGT CCTGATCACCGGAGAAAGCGGCACCGGCAAGGGCGTGGTGGCGCGACTGA TCAACGATCAGAGCAAGCGGCGCACTGGCCCGTTTTTGCAGGTCAATTGC AGCGCGGTGCCCGAACACCTGCTGGAGAGCGAGTTTTTCGGACATACCAA AGGCGCGTTTACCGGTGCCGATCATGCCCGCAAGGGGCTTTTTTTGCAGG CCAACGGTGGCACCTTGTTCCTTGACGAGATTGGCGAACTACCCTTGCAC ATGCAGACCAAACTGCTGCACATGGTCGAGGACAAGGAGGTCAGGGCGCT AGGAAGCGAGCAAGTGCGCCATGTCGATACGCGCATCATCGCGGCGACGA ATGCCGATCTTGTGAACCTGGTGAAAGAGGGTAAATTTCGCGAAGACCTG TATTTTCGGCTCAGCATGTTCCAGATTCAGATACCACCATTGAACGAGCG GCAGACGGACATGCCCGGACTGATCCGTTTTTTGCTTCACAACCTGTGCC CGAGCGGATTGGGAACAATGGAAATTGATCCTTTGGCAGAAGAAATTCTG CTGGCTCATAGATGGCCAGGAAACGTGCGAGAACTTGAAAACGTAATCAC CCGCGCGTGCATCCTGGCGGAAGACAACCGCATTTCGGTCGCTGACCTGC CCGCGACGATTATCCAGACAAACTTACCAAAGACATTGGCCGGTGCGGCG ATAGGCTCCAATGGCTCCCTTCGCGATCAGATGCGAAAATTGGAACTTGA AATCCTGCAGCGTGCGATCGAAGGTGCGGGGGGCGATCGCAAGCTGGCCG CACAGAAATTAGGAATCGGCTTGTCTAGCCTGTACCGCAAGTTCGACGAG TTTCAGCCCGATGCATTGAGCAGCGGAGACGCTGCGCCAGTGCACCCATC CTAA >Rfer_2394 transcriptional regulator, Crp/Fnr family ATGCAAAACTTGTCACGTACGCGACAAGTTGTCATTGAGCTGACAATTGA TCTGTGTTTACCCTTGCCCATGTTTCCCAGCACCGCCTCATCAACTTCAC GCTTTCTTGCCACGCAATCCTGGTTCGCCGGCTTGCCGCGTTTGACTCAA ATGCGGGTCGATGAAAGCCTCTTGCGCACGAGCGGAAGACGTGGCGATGT GATGCTGCAGGCCAATGCGAAGGTAGAGGGCTGCTACGCGGTTCTGTCGG GCCTGATCAAGGTACAGACCGTTCCTGTGAAGGGGCGGTCATCCAGTTTT TTGGGTGTGGCGTGCGGCGAATGGTTTGGGGAAGGCTCCGCACTGAAGAC CGAGCCGCGCAGGTATGAAGTCATTGCGTTGCGCGATACCGAGTTGTTGT GCCTGCCGCTGGCCGAATTTGACCACCTGCGCGCGACCAGCATTGAGTTC AACCAGTTTCTGGTGAGCCAGCTAAATCTTAGGGTGAGTCAGGCCATGGC GCTCATCGAAGCCAGCCGTCTGCGCACACCCGAGCAGCGTGTCGCGCTGT CCCTGAGCCGCCAGTTCTGGAGCCGGACCCGCAAACTTGGCCTGTCACAA GACGAACTGGCCAATCTGGTCGGGGTATCGCGTCAGACCGCCAACCGGGC TTTGCAGGCATTGGCACAACGTGGGCTGGTGACACTTGAATTCGGGCGCG TGGATATTGTCGACGACGACGCACTGACGCGCTTCATCTTTTCAGCACCC GAAAATCCGTCGGATTGA >Rfer_3398 periplasmic sensor hybrid histidine kinase GTGCCGTGCCATGGCGGCTGCCATGCCCCTGCCGTGGCATGGAAACTGCA CCACAGCGGTGTGACCTCAGACACCCACCCCATCCCGCACGCGGCCGCGT CGACACGCGCGCGGCCCGAGGCGCTGCAGCGCATCACGCTGGTGCGGCGC GACTACAACGGCTGGGTGGCGAGCGAGACGCTGGAAGACTACGCCTTGCG TTTCACGCCGCAACGCTTTCGCAAGTGGTCCGAGTGGCGCGTTGCGAACA CCGCTTTTGGCGCCGCCTCGTTCCTGATTCTGGAGGCTGTCGGCGCCACG CTGCTGGTGCAATACGGTTTTACCAACGCGTTTTGGGCCATTCTGGCCAC CGGCCTCATCATTTTTCTGGCCGGCCTGCCGATCAGCATTTACGCCGCCC GCTACGGGGTGGACATGGACCTGCTCACGCGCGGCGCCGGTTTTGGCTAC ATCGGCTCCACGCTCACCTCGCTCATCTACGCCTCGTTCACCTTCATCTT TTTTGCGCTGGAGGCGGCCGTCATGGCCTATGCGCTGGAACTGGCGCTGG GCATTCCGCCCAGCTGGGGCTACCTGATTTGTGCGCTGGCGGTGATCCCG CTGGTGACCCATGGTGTTTCCACCATCAGCCGCCTGCAGGTCTGGACCCA GCCGGTGTGGCTGCTGATGCTGGTGGTGCCCTTTGTTTATGTGCTGATGC GCGACCCTGGTGCTTTCTCGGGCGTGGTGCACTACATCGGGGAAAGAGGA ACGGGTCCGGGGTTCAGTCTGCCCTTGTTTGGTGCGGCGCTCACGGTCGG CATCGCCTTGATGACGCAAATGGGCGAACAGGCTGACTACCTGCGTTTCA TGCCTGCCAAGACGCCTGCCAATCGCCAACGCTGGTGGTGCAGTGTGTTG GTCGGCGGGCCGGGCTGGGTGATTTTGGGTGTGCTCAAGATGCTGGGCGG GGCGCTCTTGGCTTATCTGGCGATCAGCCACGCGGTGCCGGTGGACCGCG CGGTGGACCCGAACCAGATGTACCTGGCGGCGTATGAATATGTGTTTCCC AATTACGGTTGGGCGGTGGCGGCCACGGCGCTGTTCGTGGTGATCTCGCA GCTCAAGATCAATGTCACCAACGCCTATGCCGGTTCGCTGGCCTGGTCCA ATTTTTTCTCGCGCCTGACGCACAGCCACCCGGGCCGGGTGGTGTGGGTG GTGTTCAACACCCTGATTGCGTTCATGCTGATGGAGATGAATGTGTTTCA GGCGCTGGGTGATGTGCTGGGCCTGTACTCCAACATCGCCATCGCCTGGA TGATGGCGGTGGTGGCCGACCTGGTCATCAACAAACCGCTGGGCCTGTCA CCGCCGGGCATCGAGTTCAAACGCGCGCATCTGTATGACATCAACCCGGT GGGCGTCGGTTCCATGGCGCTCGCGTCCCTCTTGTCAGTCACGGCGCACC TGGGGCTGTTCGGCCCCATGGCGCAGGCCTTCTCGGCGCTGATTGCGCTG GGCACGGCGTTCGTGGCCGCGCCGCTGATTGCATGGGCCACCCAGGGCCG CTACTACATGGCACGACAGAGCGCGGCGCCAGCGGGCGGGGCGGTGGGTG AGGGGGCCTGCAAGCGCTACCAGGTGCAGCGCTGCGTGATCTGCGAACGC CAGTACGAAGGCCCCGACATGGCGCATTGCCCGGCCTACCAAGGCGCCAT CTGCTCGCTGTGTTGCACGCTGGACGCGCGCTGCGGCGACCTGTGCAAAC CCCACGCTTCCCTGTCCAGCCAATGGTCCGCCACCTTGCGCTGGCTGCTG CCGCGGCGCAGCTGGTCGTACCTGGACAACGGCCTGGGCTACTTTCTGCT GCTCATGGGGGTGACCGTGCCGCTGCTGGCCAGTGTGTTCGGTCTGCTCT ATCACCAGGAGTTGCGCGCCTTGACGCTGAGTGTGACTGACATCGTGCAG TTGCAGGCGCCGCATGCCGCTTTGCGTTCGGGGTTCTTCAAGGCCTATAT GGCGCTGCTGGTGATTGCCGGCCTGGTGGCCTGGTGGGTGGTGCTGGCGC ACAAGAGCCGCCAGGTGGCGCAGGAAGAATCCAACCGCCAGACCCATTTG CTGATGTGCGAGATCGAGTCGCACCGCCAGACCGACGAAGCGCTGCAAAC CGCCAGGCGCGTGGCGGAGCAGGCGCGCCATGCCGCCGACCAGGCGAACC AGGCCAAGAGCCGCTACATCAGCGCCATCAGCCACGAGCTGCGCACGCCG CTCAACAGCATCCTGGGCTATGCGCAGCTGATGGGCGAGGACCCGTCCAT CCCGGTGCACCGCCAGCAGGCCGTCAGCGTCATCAAGCGCGGCGGCGAGC ACCTGCTCTCGCTGATCGAAGGCACACTCGACATCGCGCACATCGAGAGT GGCAAGCTCACGCTCAATCCCCGCCCCATGCACTTCGCCTCCCTGATGCA GGACATCGCCAGCCTGTTTGAGCTCGAAGCGCAGGCCAAGGGCCTGAGCT TTCGTTATGTTGAAGGCGCCGCCCTGCCGGCCGTGGTGCGGGCGGACGAA AAGCGGGTGCGTCAGATATTGATCAATCTGCTGGGCAACGCCATCAAGTT CACCCAGAAAGGGCAGGTCACGTTTGACATCCGCTACGCGCGCGAGATGG CCGTGATTGACATCGAAGACACCGGGCCGGGCCTGTCCCCACAAGAGCTC AATCGCATCTTTGAGCCCTTTACCCGCGCCCATACGCCGGGCGCCACGGC ATCGGGCTCCGGTCTGGGGCTGACCATCGCCAAGATGCTGACCGACTTGA TGGGTGGTGAACTCACCGTGACCAGCACGCCGGGCATGGGCTCGGTGTTT AAAGTGAAACTGTTTTTGCCCGAGGTGCGCGTGACCTCGGGCGCTGTCGG TGCCCTGTGCTTGTCCGGCTCCTCGGCCGACATGCCAAGGTCTTTGGCGA ACAAACCACGCCACGGTTATGCCGGGCCACGCCGACGCGTGCTGGTGGTG GACAACGAAGAGGCCGACCGCGAGCTGCTCGTCAATCTGCTGCAGCCGCT CGGTTTTGAGCTGCGCACCGCCGCCAGCGGCCATGACTGCCTGGACCTGC TGGCAGCGGGCTATCAGCCCGACGTCATCTTCATGGACCTGGCCATGCCC GGCATTGACGGCTGGGAAACCATTCGCCGTCTGCGCGCACTGGGCAGCAC CCAGGCGCAGATTGCCATCGTGTCGGCCAATGCTTTTGACAAGGGGCTGG ACAACGACGTCGACATGCCAAGTGAAGACTTCATCCTCAAGCCGGTGCGC CACTCCGAGCTGCTGGACTGGCTGGCGCTGCGCTTGTCGCTCACCTGGCT GGACAGCGCCGCACCGGTCGCAGAGCCTGCCCCTGCGCCCCTGCCAGTCG CCCTGGTTTATCCCGAACGGCCGCAGCTCGATGCCTTGCGCGAGGTGGTG AGCCTGGGTTTTTTTCGCGGCATCATGAACAAGCTCGACGAAATCGAGGC CAGCCAGACGCAATGCACCGCCTTTGTCACCGGGATGCGCGGCCTGGCCC GGCAGTTCCAGTTTGAGACCATGAGTCAGCAACTGAACCAGGTGATCCAT GAAAACTAG >Rfer_1469 putative signal transduction protein GTGATCGCTTTGCTGCTCAACGAGCTTGACCGCGAAGAGCCCGAGCTCAG AAAAATCAGCCAGCTCATCAACACCGACCCGGTACTGGCTACGCGCTTGT TGCAACTGGCCAATTCGGCGCAGTTCCAGCTGTCCAACAAAATCAGCAGT GTGTCCGAAGCCCTGGCGCTGTTGGGGCTCAATCAGGTCAAGGCGCTCGC CACGGCGGCCGCGATTGCCGGCGCGTTCACCGCGGTCCCCGGCATTGACA TGCGCCAGTTCTGGCGCTACAGCCTCAATACCGCCAAGTTGGCACGCGCG TTAGGTGGCATGGTGCAGCAAAACCAGCCGGCCGCGTTTACCGCAGGTCT GATACACGCCACCGGTGAACTGGTGATGCACCTGGGCCTGCCAGGCGCAC TGGAAATACTGGATCGCCAAGTGCCGCCTCTCGGCCTGAAGCGCGCTGCA GCGGAGCGCAAATTGCTCGGGTATTGTTACGCCGATGTGGGTGCTGGTTT CGCCCGGCGCTGGCAGTTTCCGCAGCCGATTGTGGATGCGCTGGAACACC AACATGCGCCTTTTGACAACGACGTTTACGAACCGATGGCAGGCGTACTT CATCTGGCAGCGTGGCGCGCCCGCGCCTGGGAGGCCAATTACGACGAGCA GGATCTGATCGACAATTTCCCGGATGTTGTTGCGCTGGCCCTGGGAATTG ACATCGACATGGTGTTGCAGCAAGACCCGATTGACTGGACCACCAAGGCT GAGGTGGCAGTGCTGGCTAGCGCTTGA >Rfer_1937 transcriptional regulator, Crp/Fnr family ATGCCCTTGGGCCTGAGTGAAGAAGAACTCGATTTGATCGATGACATGGT CGCCGCGCGGCGCACGGTCAAGCGTGGCTCTCTTCTTTTTCGCAATGGCG AGAAGTTCACCAGCCTGTATGCCATTCGCACCGGTTTCTTCAAAACCTGT GTAGCCTCCGAGGATGGACGGGATCAGGTAACGGGCTTCCAAATGGCCGG CGAAGTCGTGGGTCTCGACGGAATCGTCAACGACTACCACACGTGCGACG CCGTTGCCCTGGAAGACGCTGAGGTCTGTGTCATGCCATTTGATCGTATT GAAGAGCTGTCACGCGCAGTCAATTCACTCCAGCGCCACGTCCACAAGAT CATGAGCCGCGAGATCGTACGCGAGCACGGAGTGATGCTGCTGTTGGGCA GCATGCGCGCAGAGGAGCGTCTGGCTACCTTCCTTTTGAATCTGGTTCAG CGACTGCACGCCCGCGGCTTCTCGCAGTCAGAATTGATACTCCGCATGAC GCGCGAAGAAATTGGCAGTTTTTTGGGTTTGAAACTCGAAACCGTGAGCC GCACATTTTCAAGATTCGCTGAAGAAGGCATCGTGGAAGTCAAACAACGT CATGTCCGCATCCTCAACACGGACGCGTTGAAGGATATTGTCAATCCAAA ATCCGGTGCCGGAACAGCCTGA >Rfer_2284 putative adenylate/guanylate cyclase ATGGGTGAGCACACGACTGTCGTATTTGCCGATCTGTTTGGCAGCACAAG TGTCTTTGAAGCCTTGGGGAATGCCAAAGCCACTCTGGCTGTCACGCAGA TAACGACCTGGATTGCCATCGTGGTTGAATCGCACGGAGGGCGGGTTGTC AAAATGCTGGGCGACGGGGTGCTGGCCTTGTTTCCGGACAGCGCGTCCGC CGTCAATGCCGTGGTCGAGATACAACGCCGGCATCAAAAACGCATGACCC TGGTACCGCCCGCCCAACGGATGCCGATCCGCATTGGTGTTGCCAGTGGC GATGTCGAGCTCCTGGCTGGCGATTGTTATGGTGACGCCGTCAACATAGC GGCGCGTCTGAGTGACCTCTCGGGTGCGCACCAGATCTGGGCCAATAGCG CAGCGCTGGACGGCGCCACGGAAGCAGAAGGCGTGCGCTTTCGAATTCTG GGGCCGATCAACATCCGCGGGCGCGCCGAGCCGTGTACCGTCTACCAGGT CGATTGGCAGGAAGACGTCGCCTCGGCTTTTCTGACCATGCAGGCTGAGG TGGACCCGCAGTTTGATGTGACTCAAAACGATGTGCTGGGCGGCCAGATT GAGTTGAGCTGGCTTGACAACCGCAAGACTTTCCAATCGTTTGAGCTGCC GATTCACATTGGACGCATGCATCAGGCAGAGGTGGTCGTTAATGACCCGC GCGTTTCCCGCACCCACGCCCGGATTGACTGGCGCAATGGCAGCGTCATG CTGGTGGACCTTAGCTCCTACGGCAGTTGGGTGCGGTTTTCAGGTGGCGG CTCCGACCTGTTGCTCAGGCGCGAGGAATGTGTCTTGCATGGGCGCGGCG AAATTGCCCTCGGGACATCGTTTGCCGACCTGAGCCCACCGACCGTGCAT TTTTCGGTGTCCTGA >Rfer_0896 signal transduction histidine kinase ATGAGAAGATTCAAATTTGAGTGGAACTCGCTCAAAACGCGTGTAACGCT GCTCACATTGGGGATCTTTGTGATCAGCATCTGGTCGCTGACTTTTTACA CGGGTCGTATGCTGCGCGAGGACATGCAAGGTCTGCTGGGCGAACAGCAA TTCTCAACGGCCTCCCTGATAGCCGCAGAGATAGACCGAGAGGTGGCCGA TCGCGTGCAGGCACTAGAGATCACGGCCAGAGAAATCACCCCAACCATAA TCAACAACCCGGTGGCCTTGCAAGCATTGTTCGCACATCAGCCGCTGTTA CATCATTTGTTTAATGATGGCATCGCCTCCACCGGTCCGACTGGCACGGT GATTGCCGATTATCCTCAGGTGCCAGGGCGGATTGGCGCCAATTTCATGG AGCGCGATTACATCATCGGCCCGCTCAAGAATGGCAAGGCGACGATAGGC AAGCCGGTACACAGCAAGCTCACGCAGGACCCAAGTTTTGTGATGGCGGT ACCCATCAAAGATACTGCGGGACGGGTCATTGGGGTGCTGGCCGGCATCA TCAACCTGAACAAGCCCAATTTTGTGACGACAAGCACAGGCGGCTATGAC AGCAAGGGTGGCGACTTTTTTTTGGTGGCACCGCAGCACCAGATCGTTGT CGCCAGCTCCAACAAAAGCCGCATCTTGGCAACGTTGCCTGCCCCGGGCG TCATCCCCGCGCTCGACCGCCAGGCGCAAGGGTATGAGGGGACTCAAATC TTCGTCAATCCGCTGGGGTTTGAGGTGCTGACCTCGGCCAAGCAGATACC GTCCGCTGGCTGGTACATTGCCATCACGCTAGACACCAGAAGAGCTTTTG CCCCGATTAAGGTTATGCAGCAGAACATGCTGCTCGCGGCCTGCGTGCTG ACCCTCCTCGTCACCGGACTCCTGTGGGAGATGTTGCGCCGTCAACTGAC GCCATTGCTTGCCACTGCCAAGGCACTCGCCCGCATGGCCGATTCGAAGG AATTCCCGAGCGCCTTGCCGATTGCCCGACACGATGAAGTGGGCCACCTG ATTGGCGGGTTCAACCAACTGCTGGTTTCATTGCACGAGCGCGATGCCGC ACTGAGTGAGAGTGAGGCCCGCTTTCGCACCCTGATCGAATGGACGCCTG AAGCGGTCGCTGTGCACCGCGGTGGGAAATTGCTTTACGCCAATCCGGCA GCCCTTCATATGTTTGGCGCAACATCCAAGCAAGACCTGGTGGGAAAACC CATGCTCGAGTTTGTTCACCCGGACTATCGGCACAGTGTGGTGGAGCGGA TGCAGCGCAGTTACGACAAAAACCTCCACCCGCCCATGGCGGAAGAAAAA TTCCTCAAACTCGATGGCACTGTGATTGATGTGGAAGTGACGGGCATCGT GATCAATTACGATGGCCAGAGCGCCACTCAGGTGGCAATACACGACATCA CCGAGCGCAAACTTGCAGAAGATCAGTTGCGCACCCTCTCACACATTGTC GAGCAGGCGCCGTTATCCATTCTTATCACTGATCTCGATGGCAACATCAA ATACGCCAACCCCTGGATTACGAAGGTCACCGGCTACAGCGCTGAAGAAA TCTGTGGTCAAAACCCGCGCCTTTTCAAGACTGACCAGACACCGCTCGAG GTCTATCAGGATTTGTGGCAAACCCTGCGCGCCGGGGGTGTGTGGCGCGG GGAATTTGGCAATCGCAAGAAGAACGGCGACGTGTTCGTGGAACAGGCTG TGATTGCCCCGGTGTTGGACGATGCTGGTCGCACGGCCCACTACGTTGCA CTCAAAGAAGACGTCACAGAACGCAAGCGCACAGAGCGTGCCCTGCAGAC CTCCTTGCAAGAAAAGGTGGCACTGCTCAACGAGGTGCATCACCGCGTCA AGAACAACTTGCAGGTCATCACCAGCCTGCTGCGTCTTGAAGCCGGGCGC AGCAGCCAGCCTGACACCAAGTCGGTGCTCACAGACATGCAGGGTCGCAT CCGGTCCATGGCGCTGTTGCACGAGTCGCTGTACCGCACCGGCACGTTTG CCTCGGTGGATTTGGGCGCTTACCTCAAACAGCTCGCCAGCCAGACCTTT CGGGCGCAAAGCAGTGGCGCCGTGCGGCTGGAATTGGAACTGGCGACCGT TCAAGTCAGCATGGACCAGGCCACGCCATGCGGTTTACTGGTCAACGAGC TCATCAGTAACTGCCTCAAACACGGCTTTCCTGAGGGCCGCAGTGGTGAA ATCCGCATAGAACTACATGCGATGGCAACGGCAACTGTAGCGCCAGCAAC CGAGGGTGGCGCGGCGCAGTGGCTGCTGCGCGTGAGCGACACCGGCGTTG GCTTGCCAGCCGACTTTAAGGCCAGGCGCCACCAGTCACTTGGCCTGCAA CTGGTGGCCGACTTGGTCCACCAGCTCGGCGGCACACTGGACATTGGGTC GGCACCTGGCGCAGTGTTTACTGTGGTGTTCACACCGGATGCGCCAAGCT CAACAATGGGTGCGGTCTGA >Rfer_2733 periplasmic sensor signal transduction histidine kinase TTGAACACTTTCGCTGACGCGCCGGTCACGCCCCAGGACAACAGTGGCCT GATGCCACTGGAGGCCGGCCCAACCGAGCGCCGCACGCGCTCGCGGGTGC CCTTGAGCCTCTTCTGGCGCACTTTCTTTTTGCTGGCCCTGCTGCTCGTA GGCAGCATTCTGGCCTGGCTGCAAACGCTGCGGGCGCTCGAATTCGAGCC ACGCGCCATCCAGACGGCGCAGCAGATGGCATCGCTGGTCAATTTGAGCC GGGCCGCACTGATTCACTCCGACGCCATCAACCGCGTGTCCTTGATCAAA ACCATGAAGGAGCAGGAAGGCGTGCGCATTGTGCCGCGCGAACCCGGCGA CGTTTTCGAACCTTTTGACACCGATGCGCTGAGCCAGCGCATTGCGGAGG AACTCCAGTCCAAGCTCGGACCCGGCACGGTGGTGGCCAACAGCGTCAAC AAGGAAGAGGGGCTATGGGTCGGTTTCACCATTGATGAAGACCGCTACTG GATGCTGACCGACCGGGCCCGATTCAACCGCACCACCGGGCGTACCTGGT TGATTTGGTTGATGACGGCGGGCGCCCTGTCGCTGGCCGGAGCGGCCCTG ATTGCCCGCTTCATCAACCGACCACTCAAACAACTGTCGTTTGCCGCCAG CCGGGTACGCGAGGGTGATTTCGAGGCCAGTTCGCTGGATGAAGGCGTGG CCACCAGCGAGATCCGGGCCGTCAACATCGGCTTTAACCGGATGACGCAG ATGCTGGCCAAAATCGAGCAGGATCGCGCCGTCATGCTGGCCGGCATCTC ACACGACCTGCGCACGCCGCTGGCGCGTCTGCGACTGGAAACTGAATTGA GCGTGGTTGACGTCGAGGCGCAGGCCAATATGTCCGCTGACATCGCGCAA CTTGACGCGATCATCGGCAAGTTCCTTGATTACGCCCGGCCTGGCAGCGT CGACCTGAGCCCGGTCTCACTGCGCGAAGTCTTCGATACCTGTCTGTACA GCACCCGCCACCGCACCGATATGCGCATCAGCCTGGATGTGCCTGAAGAC TTGACTGTGCTCGCTGATGAAGTGGAACTGGGCCGCGTGTTCACCAATCT GCTGGAAAACGCCGCCCGCTATGGCAAGTCCGTGGCGACCGGCGTGGCGG TGGTGGACATTGTCGCCAAGGCACGCGATCAATGGGTGCTGTTGCGCTTG CGCGATCACGGAACCGGGGTCTCCAACGAGCAGTTGACCACCCTGACCAC ACCGTTTTACAGAGGCGAGACTGCCCGCACTGCCGCCAACGGCGCCGGGC TGGGGCTGGGGCTGGCAATTGTCGAGAAAACGATTTCGCGTATGGGCGGC ACTTTTATATTGAGTAATGCATCCTCAGGTGGACTGGCGGCCAACATCAG GTTGCAACGCGCACCCAAAGCCTGA >Rfer_3606 diguanylate cyclase with PAS/PAC sensor GTGAAACGTTTTCTGCGTCATGCGCGACATTGGCTGCTGCTGGTTGTCTG CCTGGGCGCTCTGGGCGCGTACCTCGCCTACAACCTTCATGGTGAGCATG AGCGCGTTGAGGCGACGGAACGCGAGCGCCTGGCGACACAGTCGAAGGTG ATTGAAGACAACCTCTCGCGTCAGCTGGTCGCCATCAACCTCGCGCTCGA ATCGATCATGGTCGAATTGCCCGATTGGGCGGGCCGGCCCGATGGCCGGG AACTTGTCAGCCGTCGCCTCAAGAGCATGGAAGTATCAATGCCTTCGGTA CGCACCTTCGCTGTGCTGGATGAGAAAGGAACGGTCACGGCGTCGAACCG TGAAGAACTGCTGGGGCGCAATTTTCACGACCGGGACTATTTTCAGACAG CGCTGCGGGCGCCGAGTACCAAGACCCTCTACGTCAGTGCGCCGTTCAAA ACGGTACTGGACACATTTGTCATCAGTGTTGCTCGCGTCATTACCGGGCC GCAAGGGCAGTTTGCTGGTCTGGTGTCGGCGTCAGTGGACCCGGTTGACA TGCAGATATTGCTGAATTCGGTGCGCTATGCCGATGACATGCGGTCGATG CTGGTGCACGGTGACGGAACGATATTTGTCAGCCAGCCCGCGTTGGTCGA TGTAGTCGGCAAAAATTTGTCTGTTGCGGGCTCCTTTTTCAGACAGCATC TGGAGAGCAAACGCCCGGTCAGCTATTTCGAGGGCAAGGCCATCACCACG GGAGACAAGCGACTGCCTGTGCTGCGAACCATCCAGCCGGCCGACCTGAC CATGGATAAACCGCTGGTCGTGTCGGTCAGCCGGGGCTGGGATGCCATGT TTGCCCCTTGGCAGCGCGATGTCAGGAGCCAGCTTCTGGTGTACGCACTC TTCGGGTTGCTGTGCATGGCGGGCCTCATCATTTATCAGCGGCAACGGGT ACAGCAGCGCATGATCAATCAGCGGCTCAAGCTGGCAACGGAGGCCACCG GTGTCGGCATTTGGGAGTTCGATCTGAAAACACGGCGCTACCACTGGGAC CTGGCGATGTTTGGTTTGTTTGGCTTGAACCCCCAGACGGTCAATGCACT CAATAACGACTGGCAGCAGCTCCTCTTGCCAGGGGAACTGCTGCGCATGA AGGACGCAACCCGTGTCACGATCAAACAAGGCCAGGCGTTTGACTTGACA TTCCAGATTCGGCGCCAGGATGGGCAGGTGCGCTTTATGCGCAATCGGGC GGTGCTCTATAACGACGGCTCTCACGCGGCCAGTCGCCTGATCGGAACGA CTGAGGATGTCACCGAACGCAAGCTGCGGGAAGCCGATCTGCGCGTTGCC GCCACCGCCTTTGAATGCCAGGAATCCATCATGGTCACCGATGCGAACCA GCTGATTCTGCGCGTCAACCGCGCATTTACCGAGCTGTTTGGCTACACGG CGCAAGACGTTCTTGGCGCGACACCGCGGGTTTTGCAATCAGGCCGGCAT GACCCGGCGTTTTACGCCGCCATGTGGGATGGCATCACACGCGGCGGTGC CTGGCAAGGTGAAATCTGGGACCGGCGCAAAAACGGGGAGTGCTTCCCGG TTTGGCTCAGCATCACGGTGGTCTGTGGCGACGACGGTGGCGTTAGTCAT TACGTGGCCACCCACACCGACATCACGCTGCGCAAGGCGGCTGAAGACGA TATCAGGCAACTGGCCTTTTACGACCCGCTGACCGGCCTGCCGAATCGGC GCTTGCTGCAAGACCGGCTGCATCAGGCGATGAGCCAGGCCAGACGCGAG CGCGGCCGCCTGGCGCTGCTGTTCCTTGATCTGGACAAGTTCAAGCCCGT CAACGATGATTTTGGCCACCAGGCGGGTGACGAATTGTTGCAGGCCGTGG CGCAGCGGCTGCAGGCCTGCGTGCGCGAGTCAGACACCGTGGCACGCCTG GGCGGCGATGAATTTGTGCTGCTGCTGCCCAGCATCGAGGCCGCGCAGGA TGCCATGGCGGTCGCCGAGAAAATTCATCAGGCGTTCGGCAGGCCGTTCA CCCTGTCAGCAGGGCGCAACGCCACCATGTCGTTCAGCACCGGCATTGCC GTCTACCCGGAGCACGCCAGCGATGAGAAGGCGCTGATGCGCCATGCCGA TGAGGCCATGTACCAGGCCAAGGCGGCCGGGCGCGACCGGTTCGTCCTGT TTGCGCCGGCCTCTGAACCGGCAACTTTGCTGACCCCCGCCGACAGTGGC GGTACGGCCCCTACCATTGGATAA >Rfer_0509 periplasmic sensor signal transduction histidine kinase ATGTTCTTCAAGAAACTGTATGTGCGGATCTGGCTGGCCGTGGTGCTGGC GGTGGCGGTTCTGACCTTGCTGGTCGGTTGGGCCTGGCGGCTCACGGCCG AGCCACCCCTGCGCAACGTGGTCATCCGTGACCATGTCGGGAGAATCATT GGCAATGGGCACTCCCGCATGCGCCGGCCACCGGACGTCGGTTTTGGGGA GAACAGCGACCGGGCGCCAGATGCGCAGGATCGCTGGCTCGGCCCCTACA GCCAGTATGGCAACGACCCGGAGTTCGTGGTGGTGATGAACGATGGGCAA ATGGTGCATCTGCAATTCCCGCGCCCGCCACAGTCACCCTGGAGTCGCCC GCCCTTCGGTTTTTTCTGGACCCTGTCCCTGGTCGGCATCGCGGTGGCGC TGGCCACCTATCCGATCATTCGCAAGCTCACGCGCCGTCTGGAATTGCTG CAAAACGGGGTGGAGAAGTGGGGCGAAGGCGACCTTTCGATCCGGGTGCC GGAGGCCGGCGCCGACGAGGTGACCTTTCTGGCGGCGCGCTTCAACCATG CGGCCGAGCGCATCGAGACCCTGGTGAAGTCGCATGAATCGCTGCTGGCA TCGCAGAAATCATTGCTGGCCAACGCCTCGCATGAGCTGCGCTCGCCTCT GACCCGCATTCGCATGGGGCTGGAGTTGATGGGTTCGTCAGCGTCACCGG CGTTCAAGAACGAGATCTCCCGCAACATCAGCGAGTTAGACCAGTTGATT GAGGAGATTTTGCTGGCCAGCCGCCTGGATGCCCGCGAAGCCGACATGGG CACGATCGAGTCGGTTGACCTGATTGGTCTGGCAGCGGAGGAGTGCGCTC GGGTCAACGCAGAGCTCGATGTGCAACTGGCCAGCGACTCATCAGCCACA CCGACCGAGCCGGCAGGACCGTCCGACTTGCCGGTGCAAGGTGTCACCAA GTTGCTGCGCCGCGCGATGCGCAACCTGCTGGAGAACGCCAGGCGCCATG CGGCGGGCGAGATCACGGTGACACTGCGCAAGACCGACAGGCAGGCCGTC ATCAGTGTCTGTGACCGCGGCCCAGGCGTTCCACCCGAGCTGCGAGAGCG GATATTTGAGCCCTTTTACCGCTTGCCAGGCGCCACCGAGCGCGATGGCG GCGTCGGCCTGGGGCTGGCCCTGGTGAAATCGATCGCCCTGCGCCATGGT GGCACGGTGTCTTGCGAGAATCGCCCCGATGGCGGCGCCTGCTTTGTCGT CCGGCTGCCGCTTTCGCCGGTCGACAAAGTATAA >Rfer_2636 transcriptional regulator, LuxR family ATGACCTTACGATACTACTTAACTTCATACGTAGTTTTTCGTAAAGTACA AACCCTAAGTCCTGGTCACCCACAACGCATGGATATTAATTACCGTCTTG CCTTCGATCTGGCGCCAGTCGGCCTCGCCCTCTCAAGCAACCGCAGCATG CTGGACTGCAACCGCCATCTGTGCGAGATGTTTGGTGCCTCACGTGAATT ATTGGTGGGTCAGTCATTTCAGGTGCTGTACCCCAGCGCCATTGAATTTG AGCGCACCGGATCGCGCATTGCGCCGATTCTGAACCGCAACGGCACCTAC GCCGACGACCGCATCATGAAGCGCGCCAACGGCGAAACCTTCTGGTGCCA CGTGACCGGCCGCGCGCTGAACCCGAGCGCGCCGCATGAGACTGGCATCT GGACCTTTGAGGACTTGAGTTCGCGTCGCCCGGTCAAGGCGGAGTTGACG GCACGTGAACGCGAGGTCGCGGCACACCTGATGGACGGATTGACCAGCAA GGAAATAGGCAAGACGCTGGCGATCAGCCACCGCACGGTTGAAATCTACC GAGCCCGTCTGATGCGCAAGTACACAGCCTCCAACACCGGGGACCTGGTG CACAAGCTGATGGCGGGTTGA >Rfer_0704 two component, sigma54 specific, transcriptional regulator, Fis family ATGACGCCGGAGACCGTACGCTCGTTGTTGATCGTCGAGGACGATCTGGC ACTGCAAAAACAAATCAAGTGGTCGCTCGACCGCTTTGAATCAGTGACTG CCCATGATCGCAGTAGCGCCTTGCTGCAATTGCGCAAATGCTTGCCGGCG GTGGTCACGATGGACCTGGGGCTGCCGCCCGATGCCGACTCGGTGTCCGA AGGGCTCAAGTTGCTGGAGCAGGTGATGGCGTTTGATCCCGATATCAAGG TGATTGTCCTGACCGGACAGAACGATCAGGCCAATGCCCTGCGTGCGGTG GCCATGGGCGCCTATGATTTTTTCGCCAAACCGTTCGAGCCCGAGCTGCT CAACTTGACGGTGGAGCGCGCTTTCAGGATGTTTGAGCTGCAAAGGGAAA ACCGGCGGCTGCAGGCGCTGCAGCAACCCGATGCCATGGCAGGCCTGATC ACGCGTGACCCCGAAATGCTGCGCATCTGCCGCACGATTGAGAAAGTGGC AAGCAGCAATGCCACTGTCATGTTGCTGGGTGAAAGTGGCACAGGCAAAG AGGTGCTGGCGCGCGGCTTGCACCAGGCGTCACCCCGGCGGGCGGAGAAA TTTGTGGCCATCAACTGTGCCGCCATTCCCGAGAACCTGCTGGAAAGCGA ATTGTTTGGCTATGAAAAAGGTGCGTTCACAGGTGCCGCCAAGATGACTT TGGGCAAGATCGAAATGGCCCACGGCGGTACCTTGATGCTCGATGAGATA GGCGATTTGCCGCTGTCATTGCAGGCCAAGCTGCTGCGATTTTTGCAGGA AAGAGTGATCGAACGCGTCGGCGGCCGGCAGGAAATAGCGGTTGATGTAC GCATTGTCTGTGCGACCCATCAGGACCTGGCTGCGTTGAGCAAGGACGGA CGGTTTCGCGAGGACTTGTATTACCGCCTGGCTGAGATTGTGGTCAACAT TCCGCCCCTGCGCGAGCGTGTGGGCGACGCCGCCTTGCTGGCACACGCTT TTGTGCGACGCTTTGCCCAAGAGCAGAACCGCTCTGCCATGACGCTGACC GAAGACGCGGTGCAGGCAGTTGAAAACCATCTGTGGCCGGGCAACATCCG TGAGCTTGAGAATTGCATCAGACGCGCCGCCATCATGGCCGATGGCAGCC AAATCGGCTGCGACGACCTGGGTCTGAAAAGTCTCCAGAACGATGAAACC GACACCTCCCTGGATTTGCGTGTGATCCGTGACGACGCCGAGAAGCGGGC GATTGTGGCGGCGCTGGGTCGCGTCAACGGCAACATGGTCAGGGCAGCTG ATTTGCTTGGGGTGAGTCGCCCCACGTTGTATGACTTGATGCACCGACTT GCGTTGAAATGA >Rfer_2270 two component transcriptional regulator, winged helix family ATGAACGCCACCCTGTCCCCTGCGCCCATCGGGCAGCGCTGCATCTATAT CCTGGACGATGATCCCGACCTGTGCCGTCTGGTGAGTGGCACCTTGCGGG AGTTTGGTTTCGAGACCTATGAATGCGCAAGCGCGGCCGCCCTGCGCAAC CTCTTGCTGTGGCGTGTCCCTGATCTGTGCATCGTGGATCTGGGCTTGCC CGATGCGGATGGCCTGGACGTGGTACGTGAACTGCAAGCGCGATTCGCCT GCGGGGTGATGGTGCTGACCGGGCGGGGCTATTTGAGCGACCGGGTCATG GGCCTTGAGTTGGGCGCCGATGACTATATCGTCAAACCGTTTGAGCCGCG CGAATTGGTGGCGCGCGTGCGCAGCATCTTGCGTCGTCATGACAAGTCCA ACAGTGCGCAAGCACCCGAACGTTCCCAGATTGCGGAATTTTCCGGCTGG CGTTTCCTGGTCGACTCCAACACACTGACCGCGCCGAGTGGGCAGCAGTG GACGCTGAGCTCCGGTGAATCGCACATGCTGCTGCTGTTCTTGAAGCGTC CAAACCGGATCCTGGACCGCGAGCAGTTGTGTGGTGACCGCGATCTCTCG GCCCTGGATCGGAGCGTCGATGTTCGGGTTTCGCGGCTGCGTCGCAAGCT TGAATCGGACCCTGAACACCCCAAAACCATACGCACTGTCTACGGCGCGG GCTACTTGCTGGCGGTTGAGGTCAAGTGGTTGTAG >Rfer_1020 UspA ATGACCATACTCGTAGCTTATGCGCCACGTCCCGAAGGGCAGGCTGCATT GGACAAAGGCATAGAAATTGCCAGAAGCCGGAAGGAACGCTTGGTGGTCG TCAATGCGGGACCTGGGGGCTCAAAAGATGATGCCTCTCTGGCGGAAGTC GCAGATGTCGAACGAGTTGAGGCATTGCTTGCAGCGTCGGGTCTTGAGGC GGAATTCAAGCAGTTTGTTCGGGGCGCGAGTGCCGTCTCGGAAATTGAGG CCCTGATCGACTCTCTGCATATCTCATTGCTGGTCATCGGACTGCGAAAA CGCACCGCTGTGGGCAAACTCATTATGGGGAGCGTAGCGCAGGACATTCT GCTTTCTGTCTCATGCCCGGTATTGGCAGTGAAAGCCGGCTGA >Rfer_0751 PTS IIA-like nitrogen-regulatory protein PtsN ATGAATCGACTCGCAGCCATCCTCCCCCTTGCACAGGTGCTTGTGCAGGT TGATGCCACCAGCAAAAAGAGAGCTTTTGAAGAAGCGGGTTTGCTGTTCG AAAACCTGCATGGTCTCAGCCGTTCACTGGTCACCGACAGCCTGTTTTCC CGCGAGCGGCTGGGCTCCACCGGCTTGGGGCACGGCGTTGCCATTCCGCA TGGCCGCATCAAGGGCCTGAAGTTGCCCATGGCCGCCGTGCTGCAGTTGA CCCGCCCGATCGGCTTTGATGCGCCGGACGAGCAACCGGTCAATTTGCTG ATTTTTCTGCTGGTGCCCGAGTCGGCGACGCAAAAGCATCTGGAAATCCT CTCGGAAATAGCCGAAATGCTCAGCGACGCGACCTTGCGGGAAAAAATGG CGCTCAGTGCCAGCGCGGAGGAACTGCATGGGTTCATTGTCAAATGGCAA TCGGCCCAGGTGGTCTGA >Rfer_1986 metal dependent phosphohydrolase ATGAGCCCTGAACTCTCTTTAAAACTCGCCGCCGCCGTGGACGGCATGCC TGCGTTTCCCAAAAGCGTGCAAAAGATCCTGGAACTCACGCGCGACGTCA ACTGCTCGCCCAAGGATCTGGTGCAAGTCATTGACAAGGATCCGGTGGTC ACGGTCAAGGTGCTGCGCGTGGTCAACTCGGCTTACTACAGCCTGCCCAA GCAGATCACCTCCATCAACCATGCGGTGGTTTACTTGGGCTTTAACACCA TCAAAAACCTGGCCTTGAGCATCGCCGCCATCGGCATGCTGCCGGCCAGC AATGCGGCCGGTTTTGACGGCGCGCAGTACCTGATTCACTCGCTGTCCAC GGCGGCCATCGCCAAGCAGCTGGCCTTGCGTCTGGATGATGCCGACCCGA TGGACTGTTTTATTGCCGGCCTGCTGCACGATTTTGGCAAGGTGGTGTTC GCGCAGTTCATGCCGACCGAATTTCGCAAGGCCCTGGAAACCAGCCAATG GAACGAGAGCTCACTGCACCTGGCGCTGCGAGACGTGATCGGTGCTGATC ACGCGGTCGTCGGTGCGATGCTGGTCGAAAAATGGCGTTTCCCGGCCGAC CTGGTGGAAACCATTCGCTACCAGTACGGCCCGGAAATCAAAGACACACC GATGATCGCCTGTGTCTTTGCCGCCAACCAGATCAGCAAGAAGCTCGAAT TCGGCTTTGCCGGCAACCCCTACATCGAACAACTGCCACCCGCTATTGCG CAGCGGCTGGGTGGCACCTTGGACGAACTGATTGTCTCTTTGGGCGACCT GGCACCCCTGCTGGAAGAAGCCAAAATATTTTCAAAAGTTTGA >Rfer_0022 transcriptional regulator, Crp/Fnr family ATGCTCTGTCAGCCGCAAGCCCGCGCAGCCGCAAACGTGATGATGGCCAC CGCCCTGCGACCGACCGAACTCTATCCCGCGCTGGCGCAAGTGCAGCCGT CCCTGGCCGAGCTGGGTCCGGGCGCGGCGCCCATGAGCGTGCCGGCTGGC ACCGTTTTATTCAGTGAAAACACGCCCTGCCAGGGCTTCCCGCTGGTGCT GGGCGGCGAGATCAAGGTCTCGCGCAGTTCGGGTGACGGCCGCGCGCTGG AACTGTACCGGGTCGTGGCGGGCGAGTTGTGCCTGGTGTCGTCGAGCTGC CTGTTTCGCTCACAACCCCTGTCGGCGCACGGCATCACCACCCAAGCCAG CACCCTGATGCTGATTGCGCCCGACATTTTCCGGCGCTGGCTCGAAACCC CGGCTTTTCGCAACGAAGTGCTGGGCCTGTTTGCCGAGCGCATGGCGGAC CTCACCAGTTTGATTGACGCGGTGGCGTTTCACAAGCTTGACCGGCGCCT CGCCGCCGCGCTGCTGGGCCACGGCCAGCAGCGCAAGGTCACGCACCAGA TGCTGGCCGATGAACTGGGCACCGTGCGCGAGATCGTGACCCGCTTGCTG CGTCGCTTTGAGCGCGAGGGCTGGGTGACACTGGGGCGCGAGCAGATACA GATCGTCGATGGCGCGGCCCTGCGTGCGCTGGGCAACTGA >Rfer_0578 two component transcriptional regulator, winged helix family ATGAGACAGCAGCCCGGCGTCTTGATTGTGGAAGATGAGCCGGCCATCGC CGAACTGATTGCCGTCAACCTGCGCCATAACGGTTTTCGACCAACCTGGG CGATGGACAGCGCCAGTGCCCAGCGCGAACTCGATGCGGTATTGCCCGAT GTGATTCTGCTGGACTGGATGCTGCCCGGCGAGAGCGGCCTGGCACTGGC CAAACGCTGGCGCGCCCACCCGCGCACCAAGGCGATACCGATCATCATGC TGACGGCCCGTGGCGACGAGACCGATCGGGTCGCGGGCCTTGACGCCGGC GCCGATGACTACATCGCCAAGCCGTTTTCCACCAAGGAACTGCTGGCCCG CATGCGTGCCGTGCTGCGCCGACGGGCCCCCGAACAAGTCGGTGGCGTGG TCAGCGTTGGCGCCCTGTCGCTTGATACCGCCACCTACCGCGTGACGTTT GCTGGTCAGCCGCTCAAGCTCGGGCCGACTGAATTCAAGTTGCTGCAGTA CCTGATGAGCCACGCCGAGCGCGTGCATAGCCGCGGGCAATTGCTCGACA AGGTCTGGGGCGACCACGTCTTCATTGAAGAGCGCACGGTCGATGTACAC GTCAAGCGTTTGCGCGAGGCCCTGGGCGCCCAGGCCGGCCAGATGGTGGA GACCGTGCGCGGCGCGGGCTACCGGCTGACGGCGCAATCGATTCAAGCCG CGCCGGTGCAGGCCAGCGCGTGA >Rfer_1767 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGAACGAGACCCACCCGATTCAATCCGAGAAGCCGCTGCTCCTGCTGGT GGACGATCTGGCGGCCAATCTGCATGTCCTGGTGGCGGGGCTCAAAGCGG ATTTCCGTCTCAAGACAGCCATCAGCGGCGCTTCGGCCCTGGCGCTGCTG GCCCAGCAGGCGGACCAACCGAAACTGGTCGTGCTCGATGTCAAGATGCC CGGCATGAGCGGCATTGAGGTGCTGCGCCGGATGCGCGATGACCCGCATA CCAGCGATATTCCGGTCATCCTGCTCAGTGCTGACGCATCGGAGCAAAGC GAAATCGCCGGCCTGCATCTGGGTGCCAACGACTATCTCGTTAAACCCGT ATCGACCAACGTCCTGATCGTGCGGGTGCGCAATCTGATCCAGCGCAATG CCGACCGGATCCAGCTTCGCCTGGCCGCGCATGTCTTCGAGTACAGCGGC GAAGCCATCATGATTACCGACCGCGACAACCAGATTGTCGATGTCAATGC CGCCTTCACGACGTTGACCGGATACCACAAGTCCGAGGTGCTGAGCAAGA ATCCCAAGTTCCTGTCCTCGGGACGGACCACGCGGAAAGAGTACCAGGCC ATGTGGGCAGCCATTCGGACAGGCGGCTTCTGGCAGGGCGAGTTTTGGGA TCGGCGCAAGGATGGCAGCGTTTTCCCGAAGATGATGACCGTTTCCGTGG TGCTCGACCGGGCCGGGGATATCGACTTCTATCTGGCCAATTTCGTCGAT GTCAGCCACTACAAGGAAACCGAACGGCGCATCGAACACCTCGCGCACCA CGATACCCTGACCGGCCTGCCGAACCGGCTGCATTTGCAGGTGTTCCTCG AGCAATCGATATTGATCGCCAAGCGCATGTCAGAACAATTGGCGGTGGTG TTCCTCGATCTGGACCGTTTCAAGACGATCAACGATACCCTCGGCCATCC GGTCGGAGATGACCTGCTGATCCAGGTGGCAGACCGCCTCAAGACAAGTG TGCGCCAGTACGACATGGTGGCAAGGCTGGGTGGCGATGAGTTTGTCATG ATCTTGCGCGGCCATGACATGCCATCTGTGGCTTCAGCAGTTGCCGAAAA AATCCGCCTGCATCTCAACCAGCCGTTTCAGATTGGCCAGCACACCCTGC GCACGGCGACCAGTATCGGCATCGCCCTCTATCCCGGCAACGGGGAACGC ATGGACGATCTGATGAAACATGCCGACACGGCCATGTACTTCACCAAATC GGAAGGGGGTAACGGGTTCTGTTTCTTTTCATCGGACATGAATCTGCATG CCCATGAAAAACTGGAGCTGGAAAACCTGTTGCACGGGGCGCTGGAAAAT CAGCAATTCGAGTTGTATTACCAGCCCCAGCTGTCCCTGCCTGAACAACA GGTGATCGGCGCCGAGGTGTTGTTGCGCTGGCATCATCCGGAGAAGGGAT TCATTTCGCCAGCGGTGTTCATCCCCCTGGCAGAAGCTACCAACCAGATT GGCGCCATCGGTGAGTGGGTGCTGGAAAACGCCTGCCGACAGGCGAGCCA ATGGCTGCGAGACGGTTTGCCACTGCCGCGGATCGGCGTCAATGTCTCGG GGAGACAGTTCCAGGACAAGAATCTGTTCACACTGGTGAAACGTGTACTA GCGGAAACCGGCTTGCCGGCGGATCGATTGGAGCTGGAAATCACCGAAAC GGCGGTGACGGCGTCCCCTGACGAAGCTGCACGCCTGCTCCAGTCCCTGC GCGAATGCGGCATCATGGTCGCGTTGGATGACTTCGGGCAAGGCTATTCG TCACTGGGTCAACTCAGGGACCTGCCCATTGATCGCCTGAAGATCGACGC CGCCTTTGTCCGCGATATCACTGATGAACCCGGACACCCGGGCGGCGCCA TTGCCGCTGCCACCATCGGACTGGGCCACAACCTCGGATTCAGTGTGATC GCGGAAGGCGTAGAAACGCAAGCTCAATTGTCCTTCCTGATGGCGCATGG CTGTGATGAAGTCCAGGGCTATTACTTCGCAAAGCCCATGCCCAGAGAGC AGTTTGAGGCGTTCTTGCGGGCACGGATGGAGGCTGGAACAGTTGGTCGC AACTTGCCACTGACGCCCGAACCTCGAATGATTCTTACCGCTGCGAAGTA G >Rfer_3893 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TTGTATTTGTTCAATTTGTTGCCCGCCGCCTGGCGCCTGCGTGTGCCGCG TACCTTGCTGGCGCTTTGCGCGCTGGCCCTGCTGACTGCGCCAACGCTGG CGCGCGAGGTGCGCGTGGGCGTCTACCAGAACGAGCCCAAGATATTCATG GGCGCCGATGGCCAGCCCAGCGGCATCCTGGGCGACCTGCTGGTGGCGAT GGCCCGGCTGGAGGGTTGGACACTCAAGCCGGTGCCCTGTGAATGGGCGG CCTGCCTGGACGCCTTGCAGGCGGGCAATATCGACCTGATGCCCGACCTG GCTTTGAGCGAGCAGCGCTTGCAGATTTTTGACGTTCACAAGATTCCCTC GCTCTTGAGCTGGTCGCAGCTTTACAAACACAGCGGCGTCCCGATCAGCT CCATGCTGGACCTCAAGGGCAAGCGGGTGGCGGTGCTGGCGGGGTCGGTG CAGCAGGCGTATCTGCAGAACCTGCTGAGCAGTTTTGCTGTGCAAGCTGA ATTGGTGCCCGTCCAATCGCTGGAGGAGGCTTTTAAACTGACAGCCGCGC ACCAGGTCGATGCGGCGGCGACCAACCGCTTTTTTGGCGATCGACGTGCC GCCAGCTACCAACTGGACGCGACACCGATCCTGTTTCAGCCAGCCCAACT TTTTTACGCCACCGCCAAGGGGCGCAATGCGGATTTGTTGGTCGCCATCG ATCGGCATCTGGGGCAATGGCAGTCGCAAGCCGACTCCGAATACTTCACG GTGCTCAAGCGCTGGATCGAGGCGCCGCCGCAATTTTCTGTGCCCGCCTA TTTGTGGTGGAGTCTGGGTGCTTTGGCGCTGCTGCTGGCGCTGGCGCTGG CCGGCAGCGCGCTGCTGCGCCGTCAAGTGGCCGACAAAACCCGCCATTTG CGCGCCAGCGAAGACCGGCTCGCCACCATTCTCAACAGCGTTGATGCCTA TATTTATATCAAAGACATGGAGTTGCGCTACCAGTACGCCAACCGCAAGG TCTGCGAGTTGTTTGACCGGCCCCTGGCGCAAGTGGTGGGCAGCACTGAC AGCGAGTTCTTTGATGCCACCACGGTCGAGCGCTTACGCATCAATGACAA GCGGGTGATCGACAACGGCGAGCGGGTCGAGGCCGACGAGGTCAGCCGCA GCCTCGATGGCAGCCGGGAACAAACCTACCTGTCGATCAAATTGCCCCTG CGCCAACCCGATGGCAGCATCTACGCCCTGTGCGGCATTTCCACCGACAT TACCGAACACAAGCGTTCTGAGGACGCCATTCACCAGCTCGCTTTTTACG ACCCCCTGACGCTGCTGCCGAATCGCCGTTTCTTGATGGAGCGTCTGCAG CAAACCCTGAAAGCCAATGAGCGTCAACAACAGTGCGGCGCTCTGCTGTT CATTGACGTTGACAATTTCAAAGACCTCAACGACACGCTGGGGCACGCGA TGGGTGACGAGCTGTTGCGCCAGATGGCGGTGCGCTTGAGCACCTGCACG CGCGCCGAAGATACGCTGGCGCGTCAGGGCAGCGATGAATTTGTGCTGCT GCTGTGCGACCTGAGCCCCGATCTGGACGCGGCGCTGGAGCAAACCCGGC ATGTCGCTCAAAAAATACTGCAACACATCGCTGAACCCTACCTGCTGGAA ACCCGCCACTACCAGAGCACGGTCAGCATTGGCATTGCCATGTTTGGCGA CACGCCAACCAGCCGAGACGAGTTGTTCAAGCAGGCTGACCTGGCGATGT ACCGGGCCAAGGCCGAGGGTCGCAACGCCTTGTGCTTTTTTAACCCCGCC ATGCAGGCCCAGGTGACAGCCCGCACGGCGATCGAGGCCGATCTGCACCA GGCGCTGGCGCGATCCGAGTTTGTGCTGTATTACCAGCCGCAGGTGAACA TCGACGGCCAGCAGTTCGGGGTCGAAGCCCTGGTGCGCTGGCAGCATCCG CAGCGCGGACTGGTGCCGCCGCTGGAGTTCATCCCGATTGCCGAGTCGAC CGGCCTGATCCTGCCCCTGGGGCGCTGGATTTTGAGTACGGCCTGTCGAC AACTGGTGGCGTGGGCGGCCAGCCCTGAGCAGGCGCATTGGAGCATTGCG GTCAACGTCAGTGCGCGCCAGTTTCGCCAGAGTGACTTTGTGCAGACGGT CGAGCAAGTACTGCGCGATACCGGCGCCAACCCGCAGCGCCTGGAGCTGG AGCTGACCGAGAGCCTGCTGGTCGACGATGTGGAGGTCGTGATTGCGCGC ATGAGCGCGCTCAAGGCGCTGGGTGTGCGCTTCTCGCTCGACGATTTTGG TACTGGCTACTCCTCGCTGAGCATGCTCAAACGCCTGCCGCTGGACCAGC TCAAGATTGACCGCTCGTTTGTGCGCGATTTACGCCACGATCCGCAGGAT GCCAACATTGTCAAGGCCATTGTTACCTTGGGGTTTGCCATGAACCTGCA GGTTATTGCGGAAGGGGTCGAGACAGCCGAGCAACGTGATGCACTGGTGA ACCTGGGCTGCACCCATTTTCAGGGCTATCTGTTTGGCCGCCCGGCGCCG GCGCCGGCCTAA >Rfer_1628 protein serine/threonine phosphatases ATGAAATTTTCCATTTTTCAGATCAGCCGCAAAGGCTCGCGGGAAAAAAA CGAAGATCGCATGGGCTATTGCTACACGCGCGAATCGGGCATTTTTTTTC TTGCTGACGGTATGGGGGGCCACCCGCAAGGGGAGGTCGCGGCGCAGCTG GCTTTGCAGACCATCGCGGCCATGTACCAGAAAGAGGCGCAGCCGAAAAT CGTTGATATTGCTGCGTTCCTGACCTCTGCGGTGTTGACGGCGCACCGCC AGATTTTGCAGCATGCCATTCAAAACGGCATGCTCGATACGCCGCGCACC ACGGCGGTGGTGGCATTGGTGCAGGATGGGGCCGTGAGTTGGATTCATTG TGGTGACTCCCGGCTCTATCTGGTGCGCCAGGGCCAACTGTTGGTGCGAA CCCGCGATCACTCGTTTCTCGAGCAGCAACGGGCCACTGCAGCAGGTAAA AAACCGGCGGAGCGCATCAACCGCAATGTCCTGTTTACCTGCCTGGGTTC CCCAACCAAGCCGGTGTTCGACATTGCCGGACCCGTTGGACTGCAGCAGG GCGACAAGCTGATGTTGTGCTCGGACGGCTTGTGGGACCGGCTCAGCGAG GCCGACATTGTTGACTGTCTGGCGCATAAACCAGTCAGTGAAGCAGTCCC GCAGCTGGTGGAAAGCGCACTGCGCACGGCCGGCGATAGAAGCGACAACG TGACGTGTATCGCGCTTGAGTGGGAAATGCCCGATGGGTTTGAATCAACC CGGGGCAGTATTTCAACTGACACGCTCAGTGATGGATTTTTTGCCTCAAC GTTTCAGGCCGACACGCTGGACGCGGCGCTGGAAGACCTGGACGATGCCG CCATTGAGCGCTCCATCGCTGAAATTAACGAAGCCATTCGCCGCTCGGCG CTTAAAAAGAGCGCCTAG >Rfer_1870 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ ATGGCACACGTAAGACATTGGAGTCTGGGCGCCAAGTTGATGCTGGTGGG GGCGCCCTTTCTGCTGCTGGTTTTTATTTCTACCGTGGCAACGCTGTGGG TTTCCTGGCAGCTTGATGGTGGCGCCGCTGCGGTCAATGAAGCCGGCCGC ATGCGAATGCAGTCTTACCGCATGTCTCTGGCTATTGGCACCGGCGAAAC CAGAGAGCTGACCGCGCTAGCTACAGAATTTGACCGCAGTCTGGCCACCT TGCGCCATGGTGACCCCGATCGACCTTTGTTTGTGTCATGGGACGACACC TCGACAGCGCGGTTTGCCGTTATCGAGCAAGACTGGTCCCAATATCAAGC CCGTTGGATTGCAGGCCAACCACGCGTCTTGACTGACTTGCGGGCGCAGA CCGTGACCTTTGCCTCCCACATTGATGCCTTCGTGAGCAGCATCGAGGCG CACATTGCCAAATGGACTGCCATGCTGCATTTGCTGCAGATCAGCATGCT GACACTGGTGATCTTGGGAGCGGCGGTGCTGCTTTACACCGGTTATCTTT TCGTGCTGGAGCCAGTGAGCCAACTCAAACAGGCGATTGAAAACATCCAG TCAGGTAATTTTGACGCCCGGGTTGAGCGCGTCACCAGTGACGAGTTTGG CACCTTGGCCGATGGTTTCAATGACATGGCAGCACATCTGCAGTCCATGT ACCAAAACCTGGAAAGCAAAGTCGCTGAAAAGACCGCCCAGTTGCAAGAA AAGACTGCACGACTGGAGAGTCTCTATGAAGTCACCGCTCTGGTGAGCAA CGCTACTTCACTGGAGGCGCTTGCGCAAGGATTTGCCAAAACTCTGGCAC GGATTGCCCGCGCCGACGGGGTTGCCCTGCGCTGGTCAAATCAGGCCAAC CAGCGCCACCTGATTCTGGCTGCCCACGGCCTGCCGGTCTCCATGGTGGA TGCCGAGCAATGCATCTACACCGGCGACTGCCATTGTGGTGCCGCCAAAG CTGAACCCGGGCTGAACGTGATTCCAATCCGCAATATCGCCGGATCATCG CTGCAACATTGCGCCAAAGCTGGCTTTGAGACCTTGGTCACACTTCCCGT GCGACTGCATGAACGTTTGATGGGAGAGGTCGATTTGTTCTTCCACGCAC GCGTCAATCCGACTTTGCCGGAGCGTTCCCTGCTGGAAGCACTGAGCAGC CATCTGGCCAGCGGTATGGAAAACCTGCGTCTCAATGCCCTTGAAATGGA AGCGGCTGTATCGCAGGAACGCCACCTGCTGGCCCGGGAACTGCATGACT CGATTGCCCAGTCACTGGCTTTTCTGAAGATCCAGGTGCAACTGATGCGC GATGCCATCAAGTCCAGCGACCCGGTAGAAATTGCAAAAGTACTGGAAGA AATTGATATTGGCGTGCGTGAAAGTTATGGTGACGTACGTGAGTTGCTGC TGCATTTCAGAACCCGAACCAATGCCGAGGATATTGAGCCGGCACTGGCC ACCACCCTGCGCAAGTTTGAGCACCAGAGTGGCATCAAGGCGACGCTGGC AATGCAGGGGCAAGGCATGCCACTATTACCCGACCTGCAAATACAGGTGC TGCATATCATTCAGGAGGCACTCTCCAACGTGCGCAAGCACGCCCACGCA TCACAAGTCTGGCTCGATGTGCAGCAACTCCCCGCCTGGCGTTTTGAAGT ACGTGACAACGGCATTGGCTTTGACCTGGGCGATGACCCCCTCGACGAAA CACATGTGGGTCTGCGTATCATGTCGGAGCGCTCGCAGCGCATTGGTGCT GAACTTGATGTCATTTCTACGCCGTCGCATGGCAGCTCGGTCATTTTGAC ATTGCCGCTTCCTGCACACCCCATGGCCAAAGTCAAACCAGTGGCTTCGA TTCAGGCTTGA >Rfer_2211 multi-sensor signal transduction histidine kinase ATGCTGGCATCTACACTCGGCACTATGCCTTCAAGTTCTCTTATTCCACT CGCCGGTCCTGAGAAACTCACGCCGCCGGCAAGGTTAAAACGCTGGTGGC AGCGTTTGGCGCCGCAACGGCAGGACCGTTTTGCCGTGCTGGCGCCACTG GTGGCTGTGGTTCTGTTTTTGGCCGCCATCGTGGCGGCATTCGGTTATCT GCGACTGGAGGAAATCGAACGTGAGCAAGAAGCGGTCAATCGGGACGTGG AGTACACGCAGCAGCGTCTGCGTCTGCGGCTGCTGGAGCGCCAGGAACAG CTCATGCGGATCGCGCGTGAGGTTTCCAACCGGGAGCTCGATGCGGACGA GTTCCAGAGCCGGGCCGAGGCGATCGTCAACCAATACCCCGAGTTGGAAA GCCTGAGCTGGATTGACAACCGTCGCAACGTCAAAGCCAGCTTCGGCTCC GTCAGTCTGGCGCCGCACCTGGTTAAAAAAATAGGCAGCACACTGGAGCC AGGCGAATCGGTCAGCAGCTACAACCTGGCACGCGAGCTGCAGCAACCCA TTTACGCGATGCACGCGGCAGGTGCCAACAGTCCTGCCGTGCTGCAATTG CACATTCCATTCAGCGACCGCGCCCGCTTTTTGGGTGTTCTGCTGGCCGA ATACTCCATCGACGGTTTGTTCCGTTATGGCGTGCCCGCCGAGGTGTCAG CCCGTTACGCGGTCTCGTTCCATGATGCCAACGGGGGCCTGCTGGCGGGC ACCAGCATTGCGCCGCGCAAGCCCGGCGCCCGCTTGCTGCCGTGGGACAA ACCGGTCAATTTTTATGAAGTCCCGGTATCCCCGGTAGGCAATGGCCTCA TCATCCGGGCCCAGGCGTATCGGGCCTCGCTGGGCGTGGTGGGCAGTGGG CTGTTCTGGCTGGTTAACGCCCTGAGCCTGATGACGGCCTGGATGTTGAT CGCCAACTGGCGCCATACCCGCCGGCGCATGCAGGCGCAGCAGGCGCTGA TATCGGAAACCAGCTTTCGCCGGGCCATGGAAAACTCCATGCTGACGGGC ATGCGCGCGCTCGATCTGCAGGGCCGCATCACCTATGTCAATCCGGCTTT TTGCCGCATGACCGGGTGGAGTGAACCCGACCTGGTGGGGCGAACCGCGC CTTTTCCCTATTGGCCCGAGGCTGACATTGATTCCTTGTCTTCACGCCTG CAAGAAGAACTGGCCGGCAAGATTCAGTCCAGTGGCATCCAGTTCCGGGT CAAGCGCCGCGACGGATCGCTGTTTGACGCGCGGCTTTATGTCTCACCGC TGATTGATGCCCATGGCATACAAACCGGCTGGATGACGTCCATGACCGAC ATCAGTGAACCGAACCGGATTCGGGATCAACTGTCGGCCTCACACGAACG CTTTACCACGGTCCTCGAAGCGCTGGACGCCTCGATCTCGGTGGCGCCGC TGGGCAGCGACGAGCTGTTGTTTGCCAACAAACTGTACCGGCTGTGGTTT GGAACCGAAGCGGGCGGACATCTGCAACTGGTCGCCGAGGCCGGTGTACC GGCAACGCCCACCAGTGATGACTCGCTTGACCCCGTAGACGCTTTTGCCG GTCTGCCCACCAACTCGCTGCCCGACAGCGATCCTGAAAGTGCCGAGCTG TACGTCGACGCCCTGGGCAAGTGGTTGGAGGTGCGCACCCGTTATTTGAG CTGGGTCGATGGTCGCCTGGCGCAAATGGTGATTGCCACAGACATCACCG CGCGCCGGGTTGCCGAGGAACAATCTGCGGCCCAAATCGAGCGTGCCCAG ACCGCCAGCCGCTTGATCACCATGGGTGAGATGGCCTCCAGCGTGGCGCA CGAACTCAATCAGCCGCTGACCGCCATCAACAACTACTGCAACGGCATGG TGTCGCGCATCAAGTCGCAGCAAATCAGTGAAGACGAGTTGCTGGGTGCA CTGGAAAAAACTGCCAAGCAGGCGCAGCGGGCCGGTCAGATCATTCATCG CATTCGCTCTTTCGTCAAACGCAGCGAGCCCAACCGCTCGCCATCGAACA TCGAAAGCATGGTGGACGAAGCGGTGGAATTGGTGGAAATCGAGATGCGC CGGCGCAACGTGCGCCTCACCCACTATGTGGCCCCGCGCCTGCCGGTCCT GCTGGTGGACCCGATTCTGATCGAGCAGGTACTGGTCAATTTGCTTAAAA ATGCCGCCGAATCTGTGGATGCCGCCCAGCGGCCCACGGCACAACGCAGT GTCATGTTGCGCGTCGCGCCAACGCAGGTCGACGACAAACCGGTGATTGA ATTCGCCGTGCTGGACTCCGGCCAGGGGCTCGCGCCCGAGGTGATGGCGC GGCTGTATGAGGCTTTTCATTCCACCAAAGCCGAAGGCATGGGCATCGGC CTGAGCCTGTGCCGCTCGATTGTGGAATCGCACCTGGGCCGGATGAAAGC CGAGAACCTCTACAATGGCCCCGATCTGACCGGCTGCTGTTTCTCGTTCT GGATTCCCATGATAGAAGTGCTGCCACCGAAGGCACGTCTGCCAGCCGGT CAAGCCAACGACAACCAAGGACACCCAAGTAAAACATGA >Rfer_2541 periplasmic sensor signal transduction histidine kinase ATGAATTCTCCAGAGTTATCTGCATCCAACCGCCCGCCAGCCCGGGGTTG GGTCATCGTCGTGCTTTTGCTGACGGCCGCCACCGCTTGCAGCTTCCTGC TCGATCGCTATGTGTCGCTGACCAGCCAGGCCATGATTTATGTGCTGGCG GTGGTGATTGCCTCCTACAAACTGGACTGGATTGAGTCGGCCGTCTGCGC CGTGGCGGCGGTCACGGCACTGAACTTCTTTTTTGTGCCGCCGCGCTGGA CCTTCGAGGTCGAAAACCAGGAACACTTCATTGCGCTGGGCACGATGCTG GTGCTGGCCCTGGTGATCAGCCACCTGGCGAAGGGCGTGCGGCGCGAGAC CGAGCTGGCGCATCTGAACGAGCGGCGCGCCCGGCAATTGCAGGCACTGG CCACCAACCTGTCCAACGTCAATTCGCCGGCTGATATTGAGGCCCTCGGT CACAAGGCGCTGGACGCCGCCTTTGCCGGACCTTGTTCGCTGGCCCTGAC CCGGGACGGGCGTGAACTCGATTTCGCCGCGGACCTGGACCCCGCCGTGC GTGACGGCATGCGCTGTTGCGTGAAGGAGGAGGCGGTGCTGGGGCCGGGC ACCGGGCGCTGGCCCGGGCTGCTGGCCTGGTACCTGCCTCTGGGCGAGCG CGGTCATGTGACCGGCGCCGCCTGCGTCCGCCCGGCTTTGGCAGCGGATG AGGCTGGCCGCGAGCACGCTCAGGCGCTGTGTGCGCTGCTGGCGCAGGCG CTGTGGCGTCTGCGTGTGACCGCATCGATGCTCGCAGCGCAAAGCGAAGC GCAACGCCAGCAGTTGCAAAGCACTTTTTTAGCCGCGATCTCGCATGATC TGCGCACACCACTGGCGGCCATCGTGGGTGCCGCGTCTTCCTTGCAAACC CAACGCGACAAACTGAGCGAGCCGGAGCAGGACCGCCTGCTCGGCAGCAT TGTCAGCGAGGCGTCCTACCTGTCCACTGTGACCGAGAACACCTTGCAGC TGGTGCAGCTCACAGGCGCGGCGCAGGCGCTCAAACGGGATTGGGAATCG ATGGAAGAAATCGTGGGTGCCGTGCTGGCGCGGGTGCGCCAGCGTGACTC CCAGCGCCGCATCAAGTCCAATGTGCCCGAAAACTTGCCGCTGGTGAAGG CAGACCCGGTACTGCTTGCCCAGTTGATCAGCAATTTGCTGGACAACGCG CTGCAATACAGCGACGGCGCGATTGACCTGAGCGTCAGCGTTGAGGCCCA GGAACTGCTCGTTTCTGTCAAGGATCGGGGTCCCGGCATTCCTGAAGCCG AGCAAAAAGTCATTTTCGAGGCCTATACCCGCGGCGACCAGTCGGGCCAG CGTGGTGCCGGTCTGGGCCTGGCCCTGTGCCGGGCCATCGCGCTCGCGCA TGGCGGGCGTCTGACGCTGCGCCCGCGCCGGGGCGGCGGCAGCAATTTTG TGCTCGCCTTGCCGCTCGATGCCCAGCAACCTGGCCAAGAGCTGAACCAG GAGCTGCCATGA >Rfer_2452 transcriptional regulator, LytR/AlgR family ATGCTAACCGCGTTGATCATCGATGACGAGGCCCCGTCCCGGGATGAGCT CAAAGCGCTGCTGGCGGTCGAGCCCGATGTCGAGATTCTGGGGGAGTGCG CCAATGCCATCGAGGGGCTGGCAGCCATCCATCGTCTCCGTCCGGACGTT GTGTTCCTGGATATTCAGATGCCGCGCGTGAGTGGCCTGGAGATGGTCAG CATGATCGAATCCTCGGCTCTTCCGCGTATCGTGTTTGTGACCGCCTACG ACGAGCATGCCCTGCAAGCATTTGAGGAGCACGCGGCTGACTACCTCCTG AAACCGATTGATCCACAACGCCTTGCCAAAACACTGAATTGGCTGCGCAC TGGCGCACATTCCGCGCTCAAGGTCGTTCCGGGAGCAGGCAGTGCGCTGC GGCAAATCCCCTGTATTGGCCACAACCGAATATTTTTACTGCAACTCGAT GCCGTTGAATTCGTTCACACCGACATTGCCGGCGTGCAGGTGGTGGGCGC CACGCAACAGGGCACCACCGAGCTGACTTTGAAGCTCCTGCAGGAGCGCA CGCCGCTGATCCGCTGTCATCGGCAGTACCTGGTCAACATTGACCAGATC GCCGAGATCGCCTTGCTGGAGAATGGCGTGGCTGAAATCCGCACCCACAG CGGCAAATGTATCCCCGTCAGTCGTCGGTACCTGCGCGAGGTGAAGGACA GACTGCTCATTACCTGA >Rfer_0570 CheD, stimulates methylation of MCP proteins ATGAACATGTTCGCATCTGGGACGGCCGCTTTGCCGCTTCGCGCTTCGGG CGTGGTTGTTGCGCCCACGGTATTGGCGGGTGGGGCTTTGTCGCGCGTTG ATCAGTTGAAGGCGCAAATCCGCAACCCTGGCGAAGCTTCTTTTTTTTAC CGTGACCATCATTTTCAATATGACGCGGTCAAGGTGCTGCCGGGCGAGTA CTTTGTGTCCGCCGAAGATCTGGTCATCATGACCGTCTTGGGCTCGTGCA TTTCGGCCTGCATCTGGGATGGCAGGGTCCGGGCCGGGGGCATGAACCAT TTTATGCTGCCCGATGGCGACAGCGTTGATGGTTTTGGTCGCTATGGTTC GTATGCCATGGAGTTGCTGATCAACGAATTGCTGAAAAAGGGCGCACGGC GCGAGTCGATGCAGGCCAAGGTGTTTGGCGGCGCGGCGGTCATGGCGGGT TTTACCACCATGAACGTGGGTGAACGCAACACCAAATTTGTCTTGGACTA CTTGGCGACGGAGCGAATCCCGGTGGTGTCGCAGGATGTGCTGGATATTC ACCCGCGCAAGGTTTGTTTTTTCCCGGTGACCGGCAAGGTGCTGGTCAAG CGGCTGGCCCATTCGCATCCGGAAACGCTGGCCGTGGAAGAGCGCAAAGG CAATGCCGCGACCGTAGCCAAAGCGACGTCTGGTGGCTCGGTGGATTTGT TTTGA >Rfer_0367 Glutamate-ammonia-ligase adenylyltransferase ATGACAGGAATTATGACCGGCCCCGCTTTGTCAGCGCACTCGCGTTTTGG CCAGCGTATTCGTCGCCGATTTGAGAGCCAGCTGCATTTGTTACCCCCAG GTCTGCCAAGCCCGGCGTCGATGGCGCAGGCCTGTGACGCCTTGCGCGCG CTGGGCCTGGACAGCGCCAGCGCTTTGCGCACCACCCGCCAGCTGGTGCT GGAGCGCTTGCTGTGCCTGGACTGCGACCAGCAAGCGCCGTTGCAGCAGG TGACGCAGGCCATGACCGACCTGGCCGAGTTCGCGCTGAACACTGCCTGC GCCGAGGTGGAGCTGACACTGGACCAGACCCACGGCGCGCCCACGACCGC AGCGGGTGCGCGCGCGCAACTCTGGATCGTCGGCATGGGCAAGCTCGGTG CGCGTGAGCTCAACGTGTCGAGCGACATCGACCTGATCTACGTTTACGAC GAAGACGGCGACACCGCCGGCGATAGCCAGGGGCGTGGCCGCATTTCAAA TCAGGAATATTTTGCCAAGGCGGTGCGGGCTATTTACGCGCTGGTGGGCG ACACCACGGAGCACGGCTTTGTGTTTCGGGTTGATCTGGCGCTGCGACCC AACGGCAATTCAGGGCCACCTGCCGTGTCGTTGGACGCGCTGGAACAATA CCTGCATGTGCAGGGCCGGGAGTGGGAACGATTTGCCTGGCTCAAGAGCC GGGTCGTGGCCCCGCTGGGCTGTGTGGCGGACGGCTCGACCCTGGCGTTG CGTAACGTGGTGATGCCGTTTGTGTTCCGGCGCTATCTTGACTACAGCGT GTTTGATGCGTTGCGCGTGCTGCACCGGCAGATTCGCGAACATGCCAGCA AACGCAGCGCCGGGCACCCGGAGCGGGCCAACGACGTCAAGCTGTCGCGT GGCGGCATTCGTGAAATCGAGTTCATTGTTCAATTACTGCAGGTGGTGCG CGGTGGGCAATTTCCCGAGCTCAGAACGCGTGCCACGCTGAGAGCGCTGC CGCGGCTGGTCAAAGCGGGACTGATGCCGAAAAACACGGCGCAGGCACTG GCCGATGCCTATGTCTTTTTGCGCCAGGTCGAGCACCGGATTCAGTACCT GGACGACCAGCAAACCCATGTGTTGCCCACGCAGGACCAGGATCTGACCT GGATCGCCAGCACCCTGGGTTTTGCCACCGCGTGCCAGCTCTTGCACCAG CTCGACGCGCACCGCGAAGTGGTGGCCGAAGAATTTGACAAACTGCTCGG CGGCGGGGCGGATCAGAGCTGCAAGGGCTGCAACGGGGGCAATGGCGCCA AGTCGGCCGCCGCACCCGGCTTTGACGAAGTGCTTGAACAACTGGCTGAT CAGTTCCGCCAGCGGGTGGCCAACTGGCGCGAGCACCCGCGGGTGCTGGC TTTGAAAGAAGAATCGCGCACCCGGCTGCTGCGTCTCATTGCGCGCACCG CCCAGTGGGTGCGCGAAGGCCGAGCAACCGAAGCCGCTGCCGTACGCCTG GTGGACTGGATGGAGCCGCTGTTACGGCGTGAAAGCTACCTGGCCCTGTT GCTGGAGCGACCCAACGTGCACGAGCGCTTGCTGCGCCTGCTCGATGCGG CGCGCTGGCCGGCGCGCTATTTGCTGCTGCACCCGGGTGTGATCGATGAG TTGGCCAGCGCCGACTTCCTGGATGAGCGCTTCTCTGCCAGCGATTTCGA GCATGAACTCGATCACCGACGTGCCGCGCTGGCGGGCACCGGCGAAGACG ATGACGAAACCCTGCTCAATTTGCTGCGCCGCGCGCATCACGCCGAGGTG TTTCGTACCCTGGCGCGTGATGTGGAAGGCAAGTTGACGGTCGAGGCGGT CGCTGATGACTTGAGTTCACTCGCTGAGGCGGTCCTGCGCGTGACCACCC GCTGGTGCTGGAGTCGCCTGAAAAACAGGCACCGGGAAACACCACAATTT GCCATCATCGCCTACGGCAAGCTCGGCGGCAAGGAACTTGGCTATGGCAG CGATCTGGACCTTGTGTTCGTCTTTGACGACGATGATGAGCGCGCTCCGG AAGTCTATGCCAGCCTGGTGCGCAAATTGATCAACTGGCTGACGGTTAAA ACCGGCGAGGGCGACCTGTACGAGATAGACACCGCGTTGCGCCCCAACGG CAACGCCGGGCTCTTGATCACCAGCTTTGACGCCTACGCCAACTACCAGC AGCAGCGTGGCTCTAACACTGCCTGGACCTGGGAGCACCAGGCCATGACG CGGGCCCGGTTTGTGCTGGGCGACGACACGCTGCGCCAGCGTTTTGATGT CATTCGCAAATCGGTCATCTCCGCGCCGCGCCAGGCAGAGGGCCTGAAAA CAGAAATCAAGGCGATGCGGGAGCGGCTGCGCGACGCCCATGCTGGCAAA GAGGGGTATTTTGACGTCAAGTACAGCCCCGGCGGCATGATCGATGCGGA ATTCGTCATGCAGTATCTGGTGTTGTCGCAGTCGGCGCAGCTACCCGAGT TGCTTGACAACTTGGGCAACATTGCCCTGCTTGAGCGCGCGGAAGTGATG GGCCTGTTGCCCGTCGGTGTCGGCCATGCGGCGGCCAGCGCCTACCGTAC CCTGCGCCAGGTGCAGCACCGCGCACGCTTGAATGATGAGCCCTACCAGG TTCGTCTGCCGCAACTGCAGGCCGAGCGCGATGCGGTGCTGGCGCTGTGG CACGCGGTGTTCGGCGCCGCGCTCCCTTGA >Rfer_0615 transcriptional regulators, TraR/DksA family ATGACCCAAAAACTCAACACCACTTTTAAAGAACAGTTGCTGGCCCAGCG CGCCAGCCTGCTGGCGCAGCTCAGCGACCTGCGCGGCGGCACGGTGGGAC GTGCCGAGGCATCCGCCGAGCATTTTGGCCAGAAGGAAGATTCCACCGCG CAGGAGAGTAGCGCACGCGAGCTTGAATTTGCGCTCGATGCGCGCGACAG CGAGGAGCTTGACCGCCTGGACGCCGCCCTGCGCCGGATTGAGGACGGCA GCTACGGTTTGTGTGTCGACTGTGGCGTTGGGATTCCGGCCGCCCGGCTC CACGCAGCACCGGACGCGCTGCGCTGCATCGCCTGCCAGGAGAAGCTGGA AAAAGCCCAGGCCCGACAGGCCTGA >Rfer_2982 nitrogen metabolism transcriptional regulator, NtrC, Fis Family ATGAAGCCGATTTGGATCGTAGATGATGACCAGTCCATCCGCTTCGTGCT GGAGAAGGCGCTGCTGCGAGAAGATTTGCCCACGCGCAGTTTCACCAGTT CGCGCGAGGTGCTGGCCGCGCTCAATGACTGCAACGACGACAACGCGCCA CGCGTGTTGGTGAGTGACATTCGCATGCCGGGCGGCTCGGGTTTGGATCT ACTGGAAAAAGTGAAGGAAAAATACCCTGCGCTGCCGGTGATCATCATGA CCGCGTATTCCGATCTGGACAGCGCGGTATCGGCCTTTCAGGGCGGCGCG TTTGAATACCTGCCCAAGCCATTTGACCTGTCCAAGGCGGTGGAGCTGAT TCGCCGCGCGGTAGAAGAAAGCCAGCGCGAAGAAGTGGCGCAAGAACTCA CCTCCGACGCCCCCGAGATGCTGGGACAGGCGCCGGCCATGCAGGATGTG TTTCGCGCCATCGGCCGTTTGAGCCAGAGCAACGTCACGGTCATGATCAC CGGTGAGTCTGGCTCGGGCAAAGAGCTGGTGGCGCGTGCGCTGCACAAGC ACTCGCCACGCGCCAAGGGGCCGTTTGTGGCGATCAACACCGCGGCCATC CCCAAAGATTTGCTGGAATCCGAACTGTTCGGGCACGAGCGCGGCGCCTT CACCGGCGCGCAAGCCATGCGCCGGGGCCGCTTTGAGCAGGCCGATGGCG GCACGCTGTTTCTGGATGAAATCGGCGACATGCCGTTTGACCTGCAAACC CGTTTGTTGCGCGTCTTGAGCGACGGCCATTTTTACCGCGTGGGGGGCCA CAGCGCCGTCAAGACCAATGTGCGCGTGATTGCCGCCACGCACCAAAACC TGGAGCAACGCGTCAAGGAGGGCGCCTTCCGGGAGGATCTGTTTCACCGG CTCAACGTCATCCGCCTGCGCCTGCCGCCCTTGCGTGAGCGCAAGGAGGA CATTGCCGTACTGACGCGCCACTTTTTGCAGCAAAGTGCCGCCCAGCTGG GTGTCGAGCCCAAGAGGATTTCAGAAGCGGCCCTGGTGTGGCTCGGCAAC TTTGCCTTTCCGGGTAACGTGCGGCAGCTGGAAAACATCTGCCACTGGTT GACCGTGATGGCGCCAGCACAGGTGATCGAACCCAAGGACTTGCCGCCGG AAGTGGGGGTGATGGCAACTGGCCCCGGTGAGACGCCGGCCGCCATGCCC TCGCCCGCAACCCTGATGATGTCTGCCCCGCAACCGCACCCACCCGAGTC ATCGGTGGTAGCCGCCACCGCAGGCCCAGAGTCAATGCCCTCTTACGGAT CGGCTGCCACGGCGCCACCGCAGCCTGGCAGCGCCGGTGAAGTGGTCGGG GCGGCCTGGGAGTTGGGGCTTGAAGCCGAGGCCCTTGCCTTGCTGGCAAG TGGTCGCAATGATGTGTGGGACGCCCTGACGCACCGTTTTGAGGCGCGAT TGATTCTGGCCGCACTGGCCGTCACCCGGGGCCGACGCATTGAGGCAGCC CAAAAGCTGGGCATCGGGCGCAACACCATCACGCGCAAGATTCAGGAGTT GGGTTTGGAGTAA >Rfer_3410 protein tyrosine phosphatase ATGAGCACGTATTCAATACTCCTTGTCTGCACTGACAACCTGTGCCGCAG CCCAACGGCTGAGGAAGTCCTGCGCCAGAAGGCGATCCAGCATGGGCTGA CTGATCAGGTGAGGGTGGCTTCGGCAGCAACCCATGACTTCAACACCGGA GAGCCGGTCGATTTTCATGCACAGAAACACGCGATGCGCCGGGGTTATGA CCTCTCCGGTCTCAGAGCACGGCTATTGCATGCGGATGACTTTGAACGAT TTGATCTGATTCTTGCGATGGAAGAGAGCAATCTGCTGCTGCTGCGCCTG AGCTGCCCGCAAAAATACCATGACAAGCTTCACTACTTCACGCAATATTG CAGCGACCCAGCCAGCCAGGATGTGCCTGATCCGTTCTACGGCCAGCCGC AGGACTTTGAGCATGTGCTCGACGTCATTGAGGATGGTTGCGAAGGTGTT CTCATCGCGGTGAATGAAGAGATCGATCATGACGATTGA >Rfer_3192 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGCCCGAAAGTATTCAACCCAACGCGCCGCGGCGTGACGCCCTGGAAGA GTTGCAACTTGCCTTGCGCGAGCAGCAAGTCATTCTCGACACCGCAGGCG TCGGCATTGTTTTCATTAAAAATCGCCTGGTGGTGCGCTGCAATCAGCGC TTTGGGCAGATCTTTGGCCATTCCGATGCGGCCGCAATTTTGGGCAGCAC CAGCCCGTCGCTGTACCCCGACGACTTGGCTGCTCACGCACTGGCTGAAG CCGCCTACCCGGCCATGGCGCAAGGCCTGACCTTCAAGTCAGAAGTGCTG ATGAAGCGCCGCGATGGGTCGTCGTTCTGGGCTCATCTGACCGGCAAACT CGTCAACCCGGCGGACCCTCTCGCGGGCTCGATCTGGATCGTGGATGACA TCGATGAACAAAAAGCCGCGCAGGCACAGCTGCAGTCGGTATTGACCGAG CAGAACCTGATTCTGGACAATGCCATGGTCGGCATCGTATTTCTGCGCAA CCGCATCGCCACCCGCTGTAACCAGCGCTTTGAAACCCTTTTGGGCTACG AGCCAGGTGAGCTGCAAGGCGTCTCCTCGCGCCAGTGGTATCTGACGAAG CAAGACTGGATTGAAGCCGAACCCCGATGGAAAGCACCGTTTGCGGCCGG TCATGGGTTTGAGGGTGAAATTCAGTTGCGTAAGAAAGACGGCACTGCCA TTCACTGTGAGGTTCGCGCCAAGGCCATTAACGCCAGCGACCCGGAGCAG GGGGCGATCTGGATCACCATGGACATCACCGCGCGAAAAACGGCCGAAAA CGAACTGCTGCAGGCCCGCGCCGACCTTGAAAAACTGGTGGAAGTCCGCA CCCTGGAGCTCAGCCGCACTGTCCAGGAACTCAAGAACAAAGCCGCCGAA CAAAAAACCGCCGAAGCCTACATTCAGCGGCTGGCCCACTTTGATGCGCT CACGGGCCTGCCCAATCGATTGCTGCTCAATGACCGTTGCCAGCAGGCCC TGAGCGTGGCGCAACGCGGGCGCCAAAGTGTGGCCCTGATGTTTCTGGAC CTTGATCACTTCAAGAACGTCAATGATTCTTTGGGTCACCGGGTCGGCGA TGAGGTGCTGGTTGAATTGGCGGCCCGCCTGAAAGCCGCCGTGCGCGAGC AAGACACCGTCTCGCGCCTGGGGGGCGACGAATTCATCCTGCTGCTGCCC GACACCGATGCAATGGGAGCCGCCCATTTGGCTGAAAAATTGCTGCAAAC AGCACTGCAGCCGATCCTGATTGAACAGCATGAGCTGACCGTCACGCCAT CGATCGGCATCGCGCTCTACCCCAAGGATGGCACTGACCTCGACACGCTG TCCAGATGTGCCGATGCGGCCATGTACCGTGCCAAGGCCGATGGGCGCAA CGGCTACCGGTTTTACACCGCCCAGATACAAGCCCACTCTGACCGCATGC TGCTGCTCGACAATGCGCTGCGCCGGGCCCTCGAGCGCAAGCAGCTTGAG CTGCATTACCAGCCCCAAATCGCGCTGATGAGCGGTCAAGTGGTCGGCGC CGAGGCTTTGCTGCGCTGGACCCACCCGGAACTTGGCGCCATTTCACCGG TCGAGTTCATTCCAATTGCCGAAAACAATGGCCTGATCCTGCCGATTGGG GAGTGGGTCATGCGCACCGCCACCCGGCAACTGTCCACCTGGATCGCGCG TGGCATGGCACCCATCACCATGGCGGTCAATTTGTCCGCGCTTCAGTTTC GCAACCCGAACCTGCCCCAGCTCGTCACCCGCATTCTGGAGGACGCGGCC CTGCCGCCCCAACTGCTGGAGATTGAGCTGACGGAAGGCGTGGCGATGAC CCATCCGCTGGAAGCGGTCGCCGTGATGAATGAACTGCACCAACGCGGCG TGCGCATGGCCATCGATGATTTTGGCACCGGTTATTCCTCATTGAGCTAC CTGAAAAAATTTCAGGTTTACAAGCTCAAGATCGACCAGTCGTTCGTACG CGACATCACCGAGGACCCCGACGACAAAGCCATCGTGGGCGCCGTCATCA GCATGGCCAGCAGCCTGGGGCTGCAAACCATTGCCGAAGGGGTGGAGACC GAGGGTCAGCTCGAGTTTCTGCGCGCTCGGGGCTGCAACGAGGCGCAGGG TTTTTATTTCAGTCGGCCCTTGCCGACGCAGGCGTTCGAGGACTTCGTGC GCAAGCAATAA >Rfer_2198 UspA ATGTTCAAGCACATACTCGTTCCAGTGGATGGTTCACCGACAGCACAGCT GGCGGTTGAAAAGGCAATCCAGCTGGCCAAGGCCTTTGACAGCCGGGTTT CCACGATTTTCGTGATTGATCCCTACCCGTTCACCGGGGTTGGAACCGAT TTTGCTTATGGTCAGGCTGAGTATCTGAGTGCTGCGACCGCCGAGGCCAA TGCGGCCGTGAAGGCCGCCAAAGCTGCGTTCATGGACGCAGGCGTCAGCG TGGAAGCTTCCGTGATTGAATCTCACTCTGCCTGGCGTGGCGTGGTGCAG GCCGCTGAGTCAATGCAGGCCGATTTGATCGTTATGGGATCACATGGGCG CAGCGGACTGGAAAAACTGGTGCTCGGCAGCGTCACGCAGGCCGTACTGT CGCACACCAAACTCCCTGTGCTCGTCGTGCGGGACTGA >Rfer_2486 histidine kinase ATGTCCCCAAATAATCAGGATATTCGCAACCGCCTGCTGGTGGCCCGGTT GCCGTCGATGCCACAGATCCTCCTCAAGTTGATCGAACTGTGTCAGGCCG ACGAAGCGGGCATGGCTGAACTCGCCAAACTGATCGCCAACGATGCGGGT ATGACCGCCAAGGTGCTGAGCGTTGCCAATAGCGCCGCCTACCACCGCGG CGGCAACAAAGTGGGACTGCTTCAGGCGCTGGGCGTTCTGGGCTCAGACA TGATCAAGACCCTGGTCATCAGCGAGTCGGTGTTCCAGACCTTCAGTGGA TTTCCGCATTCCGGCAGCACGGATCTGCGCAGCTTCTGGAAGCACTCCTT GACCACCGCCGTCGTGGCGCGCGAGATCGCAAAAAAAATGGCCTATCCGC ACGCCGAAGAAGCCTATCTGGCAGGCCTGTTGCACGATGTGGGCCGTCTG GCTTTATTGGCCGCGGCACCCAACGAATACGGCTTCAATTTTCTGGCGCA GGACGACGCAAGCCTTTGTGCCGTTGAGCAGCACACACTTCAGATTTCCC ATGCTGACGCCGGGGCCTGGTTGATCGAACGCTGGAACCTGGACTCGTTC ATGGCCGACAGCATCCTCTACCACCACGAGTCCACGATGCGCCTTGAGGC AGCGCATCCCCTGATTCGCATCATCCATCTTGCGCAACTGCTGAGCAACC ATGACCCTGCGCTGCCCCTTTCAGCCAATGCGGGCTCGCTTTGCAAGATC AACCTGGACGACCTGTCGCTCATTTGCGATGGAGCAGCAGCCCAGGTGAA AAAGGCAGCCGAATACCTGGGCATTGACCTGTCGGGCGTAGATGACCTGG TGGCGCCGCCAGCCCGCGCGCTCGCCGCGCCGGTGGCCGATCCGGCACAG CAACGCCTGACCGAGGAGGTGCGCAACATGGCGCTGAGTGCCGAGCTCGG GCAATCGTTTGCGCGCCAAAAGGGTGACACTCAATTGCTCGACGTTGTTC GGCAAAACGCGCGCATTCTCTTCAATCTCGAAAATACGATCATCTTCCTG ATGAACGGAAGCGGTCAGGCCCTGGTGGGCGTGTCGTTCGCAGAGCAGCA ACAACGACTGGCCGAATTCTCCATCGCGATGTCCGGCGGTGGCGGCATAG CCGGGTCTGCGCTTCAGAGGCGCCTGGTTTTTCTTGAACGCGACGGCACT CGGCAAGGCCTTGCAGAAGAGCAGTTAATGCGTATTTTTGATGCCGACTG TCTGGTTTGTGTGCCTATTGCAAGCGCCTCACGCTGCCTGGGAATGATGG TGGGCGGCGTTCCCGCATGGCGAATCGCCGAATTGAAGTACCGCGAGAAG TTTTTGCAGTCCTTTGGCGCCCAGGCGGCCACAGCGCTCGAGGCGGCGAC CCGGGACCGAGGTGAAATCGATCAGCGTATCGCCAGTTTGAAGGAAGATT ATCGCGAAAGCTCCCGCAGAGTGGTGCATGAGGTCAACAACCCGCTGTCG ATCATCAAGAACTACCTTGGCGTACTGGACGACAAATTGACGCGCCAGGA ACCGGTGGCGGACGAGTTGCTGATTCTCAATGAAGAGATTGACCGGGTTG GCAACATCATCAACGAATTTGCCGGGGTCGCTCCGAAAACTCAGGCCGGC GCAACTGAAATCAACCGAGTCGTCAACGATCTGGTGCGCCTGTTTCGTGA AAGCAGATTCCTGCCACCTTCGGTGCAGATCGTGGCTCGGATGCCGGAGC AAATCGCCGAGATCAATGGCTCGGCTGACATTCTCAAGCAGATTCTGGTG AACTTGCTCAAGAATGCCGTTGAGGCGCTGCCCAGGGGCGGCCATATCGA GATCGACAACAAGGGCTGCGTCCAACGCGACGGACGCGCATTTTTCGAGT TGTGCATCAAGGACGATGGACCCGGCATTCCAGCCGAGGTACTGGCCAAG CTGTTTTCCCCGGTTCGCAGTTCCAAGGTGGGCCAGAACCGTGGCATCGG TTTGAGTATTGTTCACAGCCTGGTCAAAAAGCTCGACGGCCTGATCAGTT GCCAAAGCACCGGGGCGGGTACGGCTTTTGAAATTCTCCTGCCAGCCCGC AATGCCGCGGCTCAGGGCGCTGCTGCGTTGTCCATCAAGGCGTTGGCATG A >Rfer_1485 multi-sensor signal transduction histidine kinase ATGCTGCAGCAGACGCTGCCGCGCCATGCCAGCCGCAACCGACGCACGCT TTTGTGGCTGTTGGGTTTGTTGCTGTTGCTGGTGGGCGCGGTGGTTACCC TGGTGCTGTACCTGAATAACTTTGAGGCCGAAGAAGAGACGCGCCGTCGC GCCGCCGACGCGCAGTGGCTGGAGCAGAGCGTGCAGTTTCACTTTCGTCG ACTGGAAGACGACTTGCTGGTATTGGCCCGTCAGTCCGTCCTGGGCGACG CAAGTGCCCGGTCCAAGAAGGCCAAGAGTGTTGAAGTACAAGGCGGTTTG CTATGGCGCGAGCCCGGCGTGGTGTTGTCGCATGGCTGGCTGGCGGCTGG CCTGTCCCCTGATGCCCGGGTGGGGCCGCAGCGCTGGCAACTGGACTGGG CGGCGCACCCAGCCAATGCGCAGGCGCTCGCCACCATGCAGGACACCACG CGCGGTCTGCGGCGCTCGGCTTACGCCGGACTGATGCAGCAAGCTGACGG GTCCTTGACGGATGTGGTCTGGCTGGCTGTGCCGTTCTTTGATCGCGGCC AGTTTGTGGGCAATTACCTGGCCGCCGTGTCGCTGGAGCGTGCGGTGCGG TCCTTGGTGCCCGCCTGGTTTGCGCAAAACCACAGCGTGCGGCTGGTCGC TGATGACATTGATGCGGCACCTGCGCAGGCGTCGGCTGCTCATTCGTACC GGGCCAGCATGAATTTGCCAGGGCCAGACTTGTTCCTGGAGGTCGCCCCC ATCGGCGAGCAGCCGACCACGGTGCCGCGTATCTTCTTTTTGGTGGCGCT GCTTTTTTTGCTGGGGATGCTGATCAGCCTGGTGGCGCTGCGGCGCGACT TTGTCAAACGCCAGCAGGTGCAGGCCCGCTTGCAAGCCGAGGTGGCCTTG CGCACCGCCATGGAGAATTCGGTCACCATCGGCCTGCGGGCCTGGGACCA GCACGGCAAAATCCTGTACGTGAATCAAGCTTTTTGCAACATGGTGGGCT ACCCGGCGACCGCTCTGCTGGGCAAGTCTGCCCCCATGCCGTACTGGCCA GCCGATCAGGCCAATGAACTTCAGCTGGTGCACCGCGACATCATTGTTCA GGGTACGCAAGGCGACGGCGTAGAACTGCAGTTTCAACACCGCAGCGGGA AACTGTTGGATGTGTTGATTCATGAAGCACCGCTTACCACCGTCAATGGC GAGCAGCTCGGCTGGATGAGCTCCGTATTGGATATCAGTGAGCGCAAGCG GGCGCAACGCATGGCGACCCTGCAGCAAGAAAAACTCGAAGCGTCGGGGC GTCTGGTGGCCGTTGGAGAGGTTGCCTCCACCCTGGCGCATGAGCTCAAT CAGCCGCTGGGTGCGCTCAGCAGCTTTGCCAACGGGCTACTCAATCGTCT GCGCGGGGGCAACATCAGGTTGGACGAGTTGGAGCCGGTGGTGGCGCGCA TGGCGCGTCTGGCGGAGCGCGCGGGGGGCGTCATTCAGCGCGTCAATGCC TTTGCGCGCCGGCGTGAACTTTCCCGTCAGCACCTGGACGTGGTGGCGGT CTTGCGGCGCGTTCTCGCCAGCACGGCAGACGCGCAGACACGCCAGGTGT CGCTGGTGGATAACAATCAGGCGATCTGGATTGATGCGGACGAATTGCTC CTGGAGCATCTGATCAACAACCTGGTGGATAACGCCCTGCACTGGGCCCA TCGGGGTCCGGGTTTGGCGCAGGTGCGGGTCGAAATGGCCTGCGACCGGT CCCAAGGTCTCGCTACCCTGGTGGTGGCTGATTCCGGCCCTGGGGTGACG GAAGAGAATGGGGTGAATATTTTTAATGCTTTTTTCAGCACCAAGGAAGG CGGCATGGGCATGGGTCTGGCCATCTGCCGTTCTATTGTGGAAGCCCATC ATGGGCGGATCGAGGTCGGGCGTGACCCCGAGTTGGGCGGTGCGCGCTTT GTTGTTTGGCTGCCGCTAGCCGAAGTGCCCTTGATCGCGCCAATTTTGCC CACCTTGCTCGTTGCCCAAGGAGTCCCATGA >Rfer_1711 histidine kinase internal protein ATGAAAGATTCCCAAATTTTATCGACCTTCCAGGAACAGGCGCCAGAGTT GTCTGCGCCGGCGCCCAAGCCTGCGGCCATGCTGGTGTTTGATGCCTGTC ACGTGGGCGTGATGCTGCGTGCCGTACTGTTTGTTGAAGCGGTGGTGGCG GTGGGGGCCATGTTTGGTTCCGCCACGTTTCTTGACTGGCTGACGCGCCT GTCCCTGCTCACCGGCGGCGCTTTGCCGGCCACATTGGTCTGGTTGATTG TGGCGTGCAGCCTCAAGAAATTGCTGGCCCGGCTGAGCAGCAGCGCCCAG CAGGTGGTCGGGGTCGCCCTGGGAGCTGTGGCTGGTTTGTATGGCTGTGG CGTGCTGTCCTTGGTGGGGCTGCTGGAGCCGGCACCCTGGCTGGCCAGTG CGGCCAGCGGTGCCCTGTTGTCGGCGGCGCTGGTGGCGGCGCTGGTGTTG CGCGCCAAAGGCCAGACGCCGGCGGCCACGGCGGCGCGCTTGAGTGAGTT GCAGGCCCGCATTCGTCCGCATTTTTTGTTCAATACGCTCAACACGGCGA TTGCGCTGGTGCGCGCTGAGCCGGCCAAGGCCGAAACCTTGCTGGAAGAT TTGAGCGACCTGTTTCGCCATGCACTCATGGAACAGGGGAAATCGGTCAC CCTGCTTGATGAGATCATGCTGGCGCAGCGCTATCTGGCGATCGAAAAGC TGCGCTTTGGTGAGCGCATTCAGGTGGAGTGGGCATTGGACCCGGCTGCA TCGACCGCCAAATTGCCGCCCTTGCTGTTGCAGCCGCTGGTGGAAAACGC CGTCAAACACGGGGTCGAGCCCAGCGCGCAAGGGGCAGAAATCAAAATAT CCACGCAACGCCGCGGCTCAAGCGTCGTCATCAAGGTGACCAACACGGTG CCCGTGGGCAACAGTGAGCCTGGCAGCGGCGTGGCGCTGAATAATGTGCG GGACCGGCTCAGCCTGCTGCACGACCTGCAGGGCCAGTTTCAGTACGGGT TGAAAGACGGCGTGTTTCAGGTTCGCATCGAGGTGCCGCTATGA >Rfer_1136 periplasmic sensor signal transduction histidine kinase ATGACAAACATTGGTCTGACCCAGCCAAACCGAACTTCACATCGAATTCC ATGGCTTATGGGTCTGGGCTACATATTGGTTTTTTTGCTGCTCGACTGGG CGAGCTACATACGGCCTTTTCAAGGTCTCAATATCACGCCTTGGAATCCG CAGCCGGCGCTTGCCGTCGCATTGCTGCTGTTGAACAGGCGCTGGCTGTG GATTGTCTGGGTAAGCCTGATAACGGCTGAGCTGGTCGTGCGCGGAAATC CAGCCGACTGGCTCGTGGTATTGACATCAACGGCCGCGCTCAGTCTGGTT TACGCTGCCATTGCCCATAGCTTGACAACCCGAATGGATCGCGCGCTGGC CTTGGCCACACAAAGAGATCTTTTGTGGTTCACTGGCATCGTCGTGACTG GAGCACTGCTGAGCGGTGTGGTCTACATCACAGCATTCTCAGTGGCAGGT CTAGGGCCGAGTGGTCCAACCTACGAGCCGATCGTGCGGTATTGGATTGG CGACGCCGTGGGTCTAATCGTGCTGCTGCCAATGCTTCTCGTTGTAATGG ATCCCCTACGTCGGGCCACACTGGTCGAAACGCTTAAAAGCCGTCAGTGG TGGGCCGTCGCTGTTCTAACGTGCTTGCTCCTTTGGGTCGTGTTTGGTCC AGGTGGGCAAGACCATTTCAAATACTTCTACTTACTGTTTGTGCCTGTTG TCTGGGCATCAGCCAAGCTGGGGGTACCTGGGGCTGTGCTTGCCTCGGGC CTGACCCAGTTGGGACTGATCTTCGCCGTGCAATCGGTACCCAACGAGGA CCTGACGGTGTTCGAGCTTCAGGTGCTGATGGCCGCAGTTACCATGACAG GTTTACTTCTTGGCGTTGCCGTTGATGAAAGAACTCGCGCAGCCGCTGAA CTTCGAGGCAGCTTGCGCATGGCTGCGGCCGGCCAGATGGCGGCGGCGCT GGCCCATGAATTAAGTCAACCCCTTACAGCACTGAGCAACTACGCCCAAG CCTGCCAAATGCTCGTAACCGACGCACCCGGCCTACAACCGGATCATCGT GACCAATTGGTCGAAGTTATGCAGCGGATGGTTGACGATGCCAACCGTGC TGGTAATGTAATCAAGCGTTTGCGCGACTTTTTCAGGACCGGATCCACAC ATCTGCACTTGGCCTCACCAACGGCAATCGTCGAAGAAGCAGTGCAAGTT CACCTTCGCCGGGCCGACGCCCTGAAACTGCGTATGGAAAGCCAAATTCA GGACAACTTGCCGATGGTATGGATGGATCCTATCCAGATCGCTGTGGTAC TGCGCAATTTAGTCACGAATGCCATAGACTCTGCCGCGGCGACAAGAAAC GGCGACCTCGTGGTGATTCGGGCGTGCGTCACCGATGGCGAGTTGCTGAT CGAAGTTCGAGACAATGGCCCCGGCGTCGGCACGGCTCGCCTGCAAACCC TGTTTGAGGCCGGACCTTCAGACAAGCCGGGCGGCATGGGAGTTGGTTTG AGCATCTGCCGCGCGATTGTTGAAGCCCATGGGGGCAGACTCTGGGCGGA ACCGGGCTCAGAAGGCTGCTTCCGCTTTACGCTGCCAGTGGAGAGCGAAA ACCATAGCGAAGTTAAAAATGCATAA >Rfer_0738 PhoH-like protein TTGATTCTCCGACACCTGTTTTCTCCGCCGAATAACACCCGCTTAAGCCA CCTGTGCGGCCCGATGGACGAGCATCTGCGCACCATCGAGGTCGCGCTGC AAGTCAAAATTGCCCACCGCCACGAGCAGTTCAAGGTCGACGGCACCAAG GCCAATGCCAAGCGCGGCATGGAAATGCTGCAAGCCTTGTACGAGATGGC AGTGCGCCCGATCGAGCCCGCCACCGTGCAACTCATGCTGGCGGGCGACG CCGACATGAATGACACCGACGGCCCTGGCCTGAAGACCAGGCGCAGCGAC CTCAAGCCCCGCACCCTCAACCAAGCGCTCTACCTGGACCAGATTGCCAG CCACGACATCACCTTTGGCATCGGCCCGGCCGGCACTGGCAAAACCTACC TGGCGGTGGCGATGGCCGTGGACGCCTTGGCGCGCAGCGCCGTGCAGCGC ATCGTGCTGACGCGCCCCGCAGTGGAAGCGGGCGAGCGCCTGGGCTATTT GCCCGGTGACCTGGCGCAAAAAATAGACCCCTACCTGCGCCCCTTGTACG ACGCGCTGTATGAGCTGATGGGTTTTGAGCAGGTGCAAAAAGCGTTTGAG CGCCAGACCATCGAGGTCGCGCCGCTGGCCTTCATGCGCGGGCGCACGCT CAACACCGCTTTTGTGATTCTGGACGAGGCGCAAAACACCACACCCGAGC AGATGAAGATGTTTTTGACCCGCATCGGCTTCGGCTCCAAAGCGGTGGTA ACCGGTGACGTGAGCCAGATCGACCTGCCCAAGACCCAACTCAGCGGCCT GATTGACGCCGAGCGCGTCTTGAAACGCGTGCCCGGAATTGCCATCTGCC GCCTGACCAGCGCGGATGTGGTGCGCCACCCGCTGGTGGCGCGCATTGTG GACGCCTACGATGCACCCGGGCGCGCCAGCGCGGCGCAGCGACGCCAGGA CGACGACATCGACGATGAGGTGGCAGGACCCAAGCCGCGGGTGCGTGCGC ACAAAAAACCGGCCTGA >Rfer_3121 periplasmic sensor signal transduction histidine kinase ATGAATAGCAGCCTTCGAAGGCAATTGTTGGCCTGGGTTTTGTTGCCCCT GATTTGCGCCGTCGCGGTGGATACCTGGCTCACCTTCAAGAGTTCAGTGG ATACGGCCTCCGTCGTGCAGGACCGGCTGTTGCTGGGCTCCGCGCGGATG ATTGCCCAGCAGATCAGCTTTGAAGATGGCTCATTCCAGCACCAGATACC ACCGGCCGCACTGGAGCTTTTCCAGTCGGAGGAGTCCGACCGGATTTTTT ATCGCGTGACCACCGGCGCCGGACAGCTGCTGTCGGGCTACACCGATCTG CCAGTGCCCGTCCTGGATTCTTCACCCGATTCACCTTTCTTCTTCGGTGC CACCATGCGCGGTGAACCGGTGCGCGTGGTCGCTTTTTTCCAGCCGGTCA TTGGCAACCCTTCGGTCCTGCCAGTGGTCGTGGAAGTGGCGCAAACCACG CGTGCCCACAAGCAACTCACCAACAAGCTGTGGCTGCACGCGGTGGGGCA ACAGTTGCTGATATTGGCCCTGGTCACCATCTTCATTTTGTTTGGCCTGC ACCGCGGCCTGCAACCCTTGATTCGGCTGCGCAACGATGTGCGCTCACGC AAGGAGGGTTCACTGCAACGGCTGCAAACCAACCGGATTCCAGCCGAATT GACGCCCCTGGTGGACTCATTCAACGACTACATCCAGCGCCTGGAAAACT ACACCAGCCGTCGCGGCGCCTTTATCCAGAATGCGGCACACCAACTGCGT ACCCCGCTGGCCGTATTGACAACCCAAATCAGCGATGCTCTGCGCGCTGA AAACAAGGAAATCGGCGACAGGTCGCTGATTGCAGCACACAGGACACTGC AGCAAACCGGGCGGCTGGTCAATCAGTTTTTGACTCTGTCTTCTGCGGAA GCCTACGTCGCCGCCAAGACGCTGATGTCGACGCAGGAGTGCTGCGACAT CGTGCAGGGGATTCTGGAAGACCTGGCCGTTCAGGCCCACAGCAAGAACA TCGATTTGGGCTTTGAACGCATCGGCGGCGACACCGTCATTTCATCTGAC CCCGCTGCGTTTCGGGAAATTGCTGTCAACATCATCGACAACGCCATTCG CTACACGCCAGCTCACGGCGTGGTTACCGTGCGGGTGCAGTCAACCGAGG GGAAAATTGCCTTGGCTGTTGAAGACAATGGACCGGGCGTGCCGCTTGAG AGCCAGGAGAAAATCTTTCAACGCTTCTACCGCATAGGCGGTACAGACTC TGCGGGTAGCGGCCTCGGTCTTGCCATCGTCAAAGAGCTCGCGTCCCAAT GTGGGGCCACCATCCGGTTGGCTGCCCCCGCCCATGGGGGCAGCGGACTC TTGATCGTCATCGATTTCTTCTGA >Rfer_3573 response regulator receiver domain protein ATGACACAAACTATCCTGGTAATTGACGATGACGCGGCCGTGCGCGGCTC GTTCCAGCTGGTGCTCGGCGAGATCGGCTGCGTGGTGCGCGTGGCCGAAG ACGGCCTGCAAGGCATCGCCATGGCCAGAGAAGAACGCCCGGATTTGATC TTTCTGGACCTGAAAATGCCCGGGATTGATGGGGTTGAGACCATGCGCCG TCTGCTGGCCATGGACCCCACATTCAACATCTACATCGTCACCGCCTTCT CGCAGGAGTATCTTGACGATTTAAAGCAGGCACAAGCCGAAGGCATGACC TTTCAGTTGGCCAACAAGCCGCTGTCATCCACCCAGATACGGCACATTGC ACGCTCGGTGCGCAGCCTCAGCAATGTGAGCAAAGACAACCACAGGATCT CGCTGACCCTGTATGTGGTGTCGGTCAACCCCGAGATTCAAAAAGTCGTC GATCAGCTCAGCAACGTGTTGGCCGCCACGTACCGGGCGGGCTTTTGGGT GCTCAACGTGGTCGAGGTGCTGGGCATGCCCGAGAAGGCCCTGGAAAAAG ATGTTTTCGCCACCCCGATGCTGGTGCGCGAAGTGCCGGAGCCGGTGCTC AAACTGCTGGGCGATCTGTCGCGCATGCATTCGGTGCTGTCGGCCATCAC GGCCGAAAACGGGCACGGCGCGGGCACCGTCGTCTTGTAA >Rfer_3471 diguanylate cyclase ATGTGCCAACCACTACGTAAAAGACCTGCGCCGTCCTTCGGTCTGTGCTT GTCTGCCACTCGATGCACGCTCATGCGTTGCATGCTCGTGTTCTGCGCCA TTTTTGGGCTCAGCACATCGGTGGCGGCATTGTCGGCACCCGCTCCGATT CTTCTGGATGAATCAAATCCGCTGGTACAGGCTTGGCCGGCGGTGACGCT GCTCTCCGACCCGCAAAAGAAGCTGGGCATCAAGGAAGTCATGGAGGCAA GGGACCGGTTCACCACACCAGAAACCGCCTATGGCACGCTGGGATTGCGC AAGGATGCCGTGTGGCTTCTGGTCCCGATCTCAGTGTCCAGCCAAAGCAA TGGCCTTTGGGTGTTGGATATCGATTACCCCGTGCTCAACCGTATCGACG TCTACCTTACCCATGACAAAACCCTCATGGAACAAGCCAGGCTGGGCAGC CTGCAACCCCAAGACCAGCGACCCATTCGCAGTCGCTCGCATTCTTTTGG CTTGAAGCTGAAAGCGGGCGCCAACTACGATTTGTACCTGCGCATCGAAA GCAAGGGCGCCCTGATATTGCCCATCACGCTGAGCAAGCCCTCGGAATTT CATGCCAATGCGCTGGGGGAACAAATGCTGCAAGGCCTGCTCACCGGCCT AGCCCTGTGCCTGCTGGTGTACAGCCTGGCGCAATGGCTTACCCTGGGTG AGCCTCTGTACGTCAAGTACGCCATCCTCATATTTGGAAGCCTGCTGTTT TCAATGCTTCAATTTGGCGTCGGAGCCCAATATGTGTGGCGCGGCAATAC GTGGATGGAACTCCATACCGCCGGTTTGGCATCGCTGATCGCCGCCACCG GCTCCTTCCTGTTTATCGAACAAGCCCTGGAGGGCCCCGACGTCCACCCA TGGATCAGTCGGCTCATGAAAGCGGGTGCCGGTTTTACCGTTTTCTTTGC CTTGTGTTTCTCCTTTGACTTGATCGACATCTATATCGTCACGGCCGTCA TCAGCACGCTGGGTCTGGCGCCAGCCCTGCTGGGTTTGCCGGGCGCCATT TCACGGGCACGTCGCGGCGACAGTGTTGGCATCTATTTTTTGTTGGCGTG GGCGGCCTATTTTGTGACGACAGCGGTCATGGTCGAAGTGATCAAGGGGC GCGTCGGCGTCAACTTCTGGACCCTGCACTCCTTCCAGTTTGGCGCCACC TTCGACATGTTGGTATTCATGCGGGTGCTGGGCTTGCGAACCAAAGCCTT GCACAAGGCGGTAGAACATGCCAGGCGTGAACGGGACAGCCTGCATTCGC TGGCACATACGGACCCGCTGACCGGACTGCCCAATCGCCGCAGTCTGAAT GCTTCGATGGCGGACGCCATCAATCACGCCGGACCGGAAAATGTTGTCGC TGTGTATATGATGGACCTGGACGGGTTCAAACAAATCAACGACCAGTACG GTCATGACGTTGGCGATGAACTGCTGATCGCCGTCGCGGCGCGCCTGCGG GCCAATGTGCGTCACAGCGACCTTATCGCGCGCTTGGGTGGCGACGAATT TGTCGTGATATCCAGCGGTTTGCACAGTGTGCAACAAGCCAGAGACCGTG CCGACAAGCTTCTTGAGGCGTTCAACGACCCCTTTGCCTTGTCAGAGAAA ATCTGCCGCATCGGTCTGACCATAGGCTATGCGCTTGCGCCCCAGGATGG GAGCGACGCCATCAGTCTTTTCAAGCGCGCCGATGCCGCCATGTATGCCG GCAAGAATGACGGCAAGCATTGTGCACGTCGCGGCGATGGCACAGTACCC GCCTCAAGTCATACGGACTGGCAACCACTCGATGGCAGCAAGGTCACGGA GTTCTAA >Rfer_2398 BolA-like protein ATGACCGCCGCCGCCCTCTCCACAGCCCCCACCGCACAGCAGCTTGAACA GCGTTTGCGCGACACCCTGCAACCCAGCGCGCTGGAGGTGATCGACGAAA GCTGTCAGCACCACGGCCATGCCGGCGCCAACGGCAGCGGTTTTGGCACT CATTTTCGGGTGCGCATCACTTCACACTTATTTACCGGCAAGTCAATCGT GATGCGACACCGCCTTGTGTATGATGCGCTGCACGATTTCATGGCACACG GCTTGCATGCCCTGGCCATTGAAGCCCAAGCGCCAACTGCTTGA >Rfer_3744 PAS/PAC sensor signal transduction histidine kinase ATGCTGCAAACTGGCACAGCCATTGCTTGCTGTGCAGGCATGCACATCGA CACCCAACAGGTCCTGACACCGCCCAACGCAGCGATGGAGCCGGTGCTGC AAAAGCAACTGGCCCTGCTGCTGGAGTCCACCGGCGAGGGCATTTACGGC ATTGACATGGAGGGACGCTGCACCTTCATCAACCGGGCCGGCGCCAACAT GATCGGGCGTGAACCCGAGGAGGTGCTGGGCTGCAACATGCACGAGCTGA CGCACCACTCACACCCCGGCGGTCAGCCCTACGCGGCGCACGACTGCGCC ATCTTCAACGCCTTTCGCCAAGGCCTGCCGTGCCGCATTGACACCGAGGT GTTCTGGCACCGCGACCAGCATTGTTTTCCGGTGGAGTATTCCAGCTACC CGCTGATGGACGGTGACACGGTGCTGGGCGCGGTGATCACCTTTGTGGAC ATCACCGAGCGCAAGCGTGCCGCCGACGCGCTGCAGCTTGCCAAAAACGA ATTGGAGCAGCGCGTCAGCGAGCGCACGCAAGAGCTCTCAGTCGCACTGG GGCAACTGCGTGAACTCTCAGCCTATTCCGAGAATGTGCGTGAAGATGAG CGCACCCGCATTGCCCGCGAGGTGCATGACGAACTGGGCAGCCTGCTGGT GGCGCTGAAGATGGACGTGAACTGGATGGACAAGCGCCTGAGTGAACAGC AGCAGCGCACACCGCACGAAGCCGAAGCCATGCGCACCCGGCTGCGCAGC AAGTGCCGCAATATGAGCGGCCTGATCGAGCGGGCGGTGGACAACGTGGG GCGCATCATCACCGACCTGCGCCCCAGCATCCTGGACCATCAAGGCCTGT GGGCCGCGCTGGAGTGGCAGGCCCACGAGTTTGCCCAGTCGGCTGAACTG GCACTGGACTGGGACATGCAGGGCACCGACGGCGTGGAGCTGCCCGAGCC CGAGGCCATGGCGGTGTTTCGCATCTTTCAGGAAATGCTCAGCAACGTGG CCCGCCACGCCCAGGCCATGGCACTCACCTTGCGTATTCAAGTGGAAGCC GAGGTATTGACAATTTCGGTGCAAGACAACGGCTGTGGTGCCAATGCCCT GGCGTTTGAGGCCCCCACGGCCTACGGCGTGATGGGCATGCGCGAACGGG CGCGCCATTTTGGTGGCCAGCTTGAGATTTCAAGCCAAATCGGCCTGGGG TCGGCATTCACCCTGCGCCTGCCACTCTCAAAAATGTAG >Rfer_4122 PAS/PAC sensor signal transduction histidine kinase ATGCCTGTGCCACAACCGTCACCGCTGCACCATTTGCCCGTCGGAGCCCT CGAAGGCATGGACGAGGCGACCTGGCTGGACGTCATTCACAAGATGGACG AGGTCTATTCCAAGCTGGTGACCGATGAGATCGAGCTGGAGGAAAAGAAC GCGCAGCTTGAACAGTCGCAGCAATTCATCTTCAGCCTGCTGTCGGCCAT GAGCGATGTGCTGATCGCCTGCAATCAGAACGGCATGATCGAAGAAACCA ACGCGGCTTTGTGCGAACTGGTGGGTCTGAGCGAGCAGGCGCTGCGCGGC ACGCCGGTGCTCGGCTTGCTGGCCGACGAACAAAGTGTGCAGCGCTGGCA GTTGGCGATGTACCAATCGGCCTCGCATGACGCTGCGGTGGTGGAGATCA ATCTGCGCAGCGCCAGTGGTGAAGTGGTCGCGGTGGACTTCAATTGCACC CCCCGGCACAACAGCGCCGGTCGCCAGGTCGGCCGGGTGCTGGTGGGACG CCCCCTGGGCGAGCTCAAACGCGCCTACCAGCAGTTGCGCCAGGCGCACG AGGCCTTGAAAAATGCGCAGGCGCAACTGCTGCATTCGGAAAAGATGGCC TCGCTGGGGCGGCTGGTGGCTGGCGTGGCGCACGAGCTCAACAACCCGAT CAGTTTTGTGCTGGGCAATGTGCATGTGCTGCAACGCTACGGCGCACGCC TGAGCCGCTACCTGCAGGCGCTGCACCAGCTTGACCTGCCCGCGCCGGTG CAGGCGCTGCGCGCTGAGCTGCGTATCGACCACTTGGTGGGCGACCTGCC TTCGCTGATGGCGGGCACGTTAGAGGGCGCCCAGCGCACCACCGACATCG TCAACGGCCTCAAGCGCTTTGCCACCGCGGCGCACGAGGACGTGACGCAG GTGGAACTCAACGCGGTGGTGGAGCGCGCCATGCTGTGGGTCAAAAAAGG CACGTCGCCCCGGTTCGAGATGGTCTGGACGCGTGGCCCCGATTGTTTTG TCACCGGCAACGCCGGGCAGTTGCTGCAGGTGGTGATGAACCTGATCCAG AACGCTTCGGACGCCGCCAGCACAGACGACGCCACTGCGCCGCAATTGCG CATCAGCCTGCAGCAAGATGGCGGGCAAGTGCGTCTGCGCTTTGCCGACA ACGGCCCAGGCATTGCACCTGAACATTTGTCGCGCGTCTTTGATCCGTTT TTTACCACCAAGAGCGTGGGCAAAGGCACCGGTCTGGGTCTGTCGATCAG CTACGGCCTGGTTGAGCAACACGGCGGGCAGCTCAGCGCCGCCAACCTGC CGCAAGGAGGCGCGGTGTTTACGCTGACATTGCCGATGCCAAAGGCATAA >Rfer_0477 response regulator receiver domain protein ATGACTTTTTCACTCCCGCAAGCCAACACCTTGATCATTGACGATTTCCA GGGCATGCGCACCATGCTGCGGGACTTCGTCCGGCTCATGGGCGTCACCC GAATCGACACCGCCAGCAATGGCCATGAGGCCATCAACCAGCTCAGCGCC AACAAATATGACATTGTTATTTGTGATTACAACCTCGGGCCTGGCGCCAA CGGGCAGCAGGTGCTGGAGGAGGCCAAGCTGCGCAATTTTGTCGGCGTGT CCACCATCTGGGTCATGGTCACGGCCGAAAAAACAACCGACATGGTGATG GGGGCGGCGGAGGTCAAGCCCGACGACTATCTGCTCAAACCGATCAACCA GGTGCTGCTGCAAAGCCGTCTGGAAAAATTGATCACGCGCAAGCAGTCGC TCGGTGCGATCGAGGCTGCCATCCGGACGCAGGACTACAGCGCTGCCATC GCTCTGTGCGATCAGCAGCTGAATGCGCGCGCGGTCAATCCGCAGGAAGT TTTGCGCATCAAGAGCGACTTGCTGCTGACCCTGGGCGACTACCCGGCCG CGCGGACACTGTTCGAGTCGGTGCTGGCATTGCGCAGTGTGGCGTGGGCC AAGACCGGCCTGGGCAAGGTCTTGTTTTACGGCCAGGACTATGCCGGTGC GGTGCAATTGTTTCAGCAGGTGCTGCAGGAAAACCGGATGTACATGGAGG CGGCCGACTGGCTGGCCAAGACCCTCGACGCGATGGGGGACAGCGCGCAG GCCCAGCAAGTACTGGAGGACGCGGTGCAACTGTCGCCCAACTCGCCGAT CCGCCAAAAGACCCTCGGCGACACGGCCTACCGCAATGGCGCGCTCGATG TGGCGCAGGCGGCGTTCGAGAAGACCATCAAGATCAGCGAATTTTCGCCG CACAAGAACCCGGCGGTGTACGCCCGGCTGGCGCGGGTCTTCTCGGACCA GGACTCCCCTGAAGAAGCGCTGAACATCCTCAAACGCAGCAAAGCCGACT TCCGATACAACCCGGCCGCCGCCCTGCAAACGGCGGCGGCCGAAAGCCTG GTCTATCAAAAAATGGGGCAGGTGCAGAAAGCCGAAGCGGCCATGCTGGA TGCCGAGCGACTGATGGAACAACTGGCCGACAAGGTGAGCCCCGAGATGA CGATGGAGGTGGCCAAAGCGCTGTTCAAACTGGGAAAAAAGGACAAGGCA TGCGGCTTGCTCCGGGACCTGGTCAAAAACAACCATGAAGACGGCGAACT CTCCAGGCAGATCGGCGCCGTCTTTGAGGGCGAAAACATGGCGGAAGAGG GCCAGACCCTCATCAAGGCCTCGCGCAATGAAGTCATCGACATCAACAAC CAGGGCGTCACGCTGGCCAAGCAAGGCGACTTCCAGCAAGCGGTCAAACT ATTGCGAACTGCCGCGCAGCAGCTGCCCCATAACGAAGTGATCAGCGTGA ACCTGTGCGGCTTGCTGATTGGCCTGATGCAACAAAAAGGCAAGACCGAG GACCTGGTTCTTGAAACCAGAGAGCTGCTCGGCCGGGTGCGCGAAATGAA CCCGGTCAACCAGAAATACCGCGCCTATGCGCTCGCGCTGGCCCGTCTGA CGAACGAGCACTAG >Rfer_2786 two component, sigma54 specific, transcriptional regulator, Fis family ATGAGCGATTTGCCTGACGACCCCGTCACGCCGCCCGCAGCGGCGCTTCG TGCACCCGGGCCCCATTTGCTGGTGGTTGACGATGACGCCGACATGCTGC GCCTGCTGACCATCCGGCTCACGGCGGCGGGCTACCGCGTGACGGCGGTC ACCTCGGCCGAGGCCGCCATGACCCAGCTGCATATCGAGCGGCCGCAACT GGTGCTCAGTGACGTGCGCCTGCCGGGCCGCGACGGCCTGGCGCTGTTTG ACGACATTCGCGCGCAGCATCCCTCGTTGCCGGTTATTTTGCTGACCGCC CATGGCACGATTCCCGATGCGGTCCAGGCCACCGAGCGCGGCGTCTTCTC CTACCTGACCAAGCCCTTTGATGGCAAGAGCCTGCTCGACAAGATTGCGC AGGCGCTGTCGCTGAGCGCCCCGGCCCATTCAGTCAAGCCCGGCAGCCCG CAGGCGTGGCAAAACCAGATCGTCAGCCGCTCCAGCCGCATGGCCGAGGT GCTCGCGGAAGCGCACATGGTGGCGCAATCGGACGCCAGTGTGCTGCTGC GCGGCGAAAGCGGCACCGGCAAGGAACTGCTGGCCCGGGCGATTCACCAG GCCGGCTCGCGCGCCGGTAAACCGTTCATCGCGGTGAACTGCGGCGCCAT TCCGGAGCCCTTGCTGGAGTCGGAACTGTTTGGCCATGTCAAGGGAGCCT TCACCGGCGCCGTGGCGAATCACATCGGGCTGTTTCAGGCGGCCGACGGC GGCACCCTGCTGCTCGACGAGATCGGCGACATGCCGCCCGCGCTGCAGGT CAAGCTGCTGCGGGTGCTGCAGGAGCGCATGGTGCGGCCCTTGGGCTCAA GCCAGTCCATTCCCGTGGATGTGCGCATCATCTCAGCCACGCACCGCGAC CTCGACCTGGCGATGGCCGAGGGCCAATTCCGTGCCGACCTGTACTACCG GCTCAATGTTGTCACCTTGAGCTTGCCGCCGCTGTCCGAGCGGCGCGAGG ACATCGCGCTGCTGGCCAACTATTTTTTGGTCAAATTGGCCGACAAATAC AAAAAACGCCTGAGCGGATTTGCGCCCGAGGCCCTGATTGCCTTGACCAC GGCCGCCTGGCCGGGCAATGTGCGCCAGCTCTACAACGTCGTGGAGCAGG TCTGCGCCCTGTCGACCTCGCCGCTGGTGCCGCTGGCCCTGGTTCAGCGC GCCCTGCGCTCGCCCAGCGTGGAGGTGCTGACCCTGGCCGAGGCCCGGCA ACGCTTTGAGCGCGACTACCTGGTGGGACTGCTCAAGCTCACTGACGGCA ATGTGGCCGACGCCGCCCGTCTGGCCGACCGCAACCGGACCGAGTTTTAC CGCCTGATGCAAAAGCACGGCCTGACGCCCGGGCTGTTCAAGGCCGACAG CAACGGGCCGGCCTCGCCCCCTGCTGCGAGCTGA >Rfer_1082 histidine kinase ATGAGCACGACCGCGTCGAGGGGGACGCAAGCCAGCGACATCCAGCGCCT GCAGCGCGAGTTGCTCCAGGCACGCACTGAGCTTGATGACTTCACCTACG CGGTGTCACACGACCTGCGCGCCTCGCTGCGCCATGTCAGCGCCTATGCG CAAATCATCCAGGAAGACCTGGGCGAGCGTCTCACCCCCGACATCGCTGC GCACCTCGCCACGGTGCAGCAGGCGGCCAAGCAGATGACACGCCAGATCG AAGGTTTGACTGAGTTGTCGCGACTGACGCGGCTGGATTTGCAACTGACC CGGCTGGACGTCGGGCAACTGCTGCGTGATGTGCTGACGGCCATGGCCCC CGCGCTGCAAGGCCGAGTGATTCACTGGCAGGTGGCGCAAGACATACCCG CCCTGCAAGGTGACGCGGTGCTGATTCGGCAGGTATTGATGCACCTGCTG TCCAACGCAGTCAAGTTCACGGCGCATCGAGCGGTGGCTGAAATCGAGTT GACGTGGCAAACCCATGCCAGCGGCCTGTGCGCCTTGACCATCACCGACA ACGGTGCGGGTTTCAACCCGCAGTACAAGGACAAATTGTTTCATGCGTTT GGGCGCCTGCACGGGGCTCGTGAGTTTGAGGGCCTTGGCATGGGCTTGGC GCTTACCCGCAAAATCGTGGAACGCCACGGTGGCGTGGTTTGGGCCAACG CCGCACCCGATGCGGGCTGCAGCGTCAGTTTCACATTGCCGCTGGCGCCA ACCGTGAATTAG >Rfer_3082 two component transcriptional regulator, LuxR family ATGCATAAGGAAACTGTGTTCATAGTCGATGATGATGCATCGATTCGAGA TTCGTTGTCACTCTTATTGAGTCTGCGGGGATATGCAACTGCGCTGTTTG CCAATGCCGAGGATTTTTTGGCGGCGCTTCAGCCCGATTGGCGAGGCTGT GTGGTGGTTGACATCCGAATGCCCGGCATGTCGGGGTTAGAGCTTCAAAG GTGTCTGCGAGAGCGCGGTCCGAGTTTGCCAGTCATTGTCATAACAGCGC ACGGAGACGTCGCAGCGGCCCGACAGGCGTTTCTGGCAGATGCCGTGGAC TTTATTGAGAAACCTTTTGACGGCAAGCAACTTCTGGGTGCGATCGAGAA CGCCCTGTCTGGCTTTCGCGCCCTTGACATTGCACAGGCTAGAGCTGCTT TCACCAAACCAACGCTTGGGCAACTCTCGATACGAGAGCGTGAAGTAATG ACATTGATGGTTAAGGGTCTTCACAACCGTCGAATTGCTGAGACGCTTGG TATCAGTCCCAGAACCGTTGAGGTCCACAAGGCACGGGTGATGGAAAAAC TCGGCGCACAAAACATTGTCGATCTGGTGCGATTGGTTGATAAGGGCTTG ACCTGA >Rfer_0504 periplasmic sensor signal transduction histidine kinase ATGAGGACCGCTCGCCGCCTGAAGTCCTTGCAGGCCCGCTTGCTGGCACC CTTGCTGGGGCTGCTGACCGTGGTCTGGCTGGGCGCGGCTGTCATGATCT GGTTTGATGCCAGCCACGAACTCGATGAATTGCTGGACGGCCATCTGGCG CAGGCCGCCGCCTTGCTGATCATGCAGCAGGCCCACGCGCATGAGGCGGA CAGCGTGGAAGACGCGCCCTCACTGCACAAGTACGCACCCAAGGTGGTGT TTCAGGTGTTTCACGAAGGGCGGCTGGTGTTGAGCTCGGCCAATGCCGGC ACCGCGCCGATTGCCGGCAACGCGCAGGGCTTTTCAACTGTGCGTTTGGC CGATGACGCCCAGTGGCGGGTGTTTGCGACCCGCGGCGCCGAGCACGATG TGCAGGTCTATGTCGGCGAGCAGACCGAGTCGCGCGATTCCATTCTGTTG GCCGTGCTGCAAGGGGTGCTGTTGCCGCTGGTTATTGCGCTGCCGCTGTT GGCGCTGGTTGGTTGGTGGGCCGTCCGTCAGGGCCTGGCGCCCCTGCGCC ACCTCAGTCGGGTGCTGGCACAGCGCCGCCCGCAGGCCATGGAACCGTTG CTGGTCCCTGACTTGAGCACAGAAATGGTGCCCGTGGTGCAGGCCCTGAA CGGCCTGTTTGAACGCATCGAGCAGATGCTGGTGTCGGAGCGGCGCTTCA CGGCCGACGCGGCGCACGAGCTGCGCACCCCGATTGCCGCCATCCGCGCC CAGGCGCAGGTGGCGCTGGGTGCCGGTCATGATGCCGCGCAGCGCGACCA TGCCCTGCAGTTCACCCTGGCCGGCTGTGATCGGGCCACCCACTTGGTCG AGCAATTGCTCACGCTGGCGCGGCTGGAGGCGGCCCCCGCCAGCGCTGCC GATGCGGTGGCCAGGGTGGATTTGAGCGCGCTGGCACGCCGTGTGGCGGC CGATCTGGCGCCCACCGCGCTGGCGCGCGGGCAAACCCTGCAGCTCGAAG CGCCCACCGCCTGTCAGGTGGCAGGTGATGAAGCGCTGATCGGGGTGCTG GTGCGCAACCTGGTTGACAACGCCCTGCGCTACAGCCCGAACCAGGCGCA GGTTTGGGTCAGCGTGGCGATGGAGTCCGGGCAAGCCGTGCTGCGCGTGC AAGACAGCGGCGCGGGCATGACCGAGCCCGAGATAGCACGCCTGGGCGAG CGGTTTTACCGCGTGCTGGGTAGCGACCAGCCGGGCAGCGGCCTGGGTTG GTCGATTGTCAAGAGAATTGCGACTGTATTTGGCGCCCAGGTGCAGGTCA GTCGCTCTGAACGCCTGGGCGGCCTGGCGGTGACGGTGCGCTGGCGGCGC TGA >Rfer_1093 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TTGTCTGCCAAGTTTGTGAATGAAGACCTGAACCCCCAACAGACCGAAAC CGACACCGCGTTGCGACAGCTCAATGCCCAGTTGACGGAGAAATCCCGAC TGCTGCAAACCACGCTCACCAGCATCAGCCAGGGCATCCTGGTATTTGAT GTGCAAGGGCGGGTGGATATTTTCAACCCCAGAGTTTGCGAGTTGCTGGA CCTGCCGGAGCGTCTGCTGGCCAGCCGACCGACGGTGCAGGCGCTGACCC GTTACCAACGTGACAGGGGCGATTTTGGTCGGGACGCCGCGCTGGTCGAG GTCCATGCGCGCAACTGCGTGTTGGGCGTGGCTGCTGGCGCCCCTGACGA CCTGCCCTCCCACTATCTGCGTGTGACACCGGCGGGTCGCACCCTGGAAG CCAGGACGCAGGCGCTGCCTGAGGGCTGCATGGTGCGCACTTTTACCGAC GTCACGGACTATGTGCAGGCGCAGGCCACGCTACAAAAAAATGAGGAACG CTGGAAGCTGGCCCTGGAGAGCACTGGCGATGGCGTCTGGGACTGGCATA TCCAGAGCGGTGTGGAGTTCTATTCCAAGCGATTGCTGGAAATACTCGGC TACGACGTCGGTGATGTCCACCTTCAGGCGCGGGGGGAGTTCGACAAGCT CATTCATCCCGACGACATGGCGCAGCTCCTGCGCGCGCGTCAGGCCCATT TTGACGGCCTGACCTCCACCTATGCCGATGAACACCGCGTGCGCTGCAAG GACGGCAGCTGGAAGTGGATGCTGTCGCGTGGCATGGTCATCAGCCGCGA CGCGCAGGGCTTGCCGCTGCGCATGATTGGGACCCACACCGACGTCACCG AGCGCAAGAAATCAGAAGCGCTGATCTGGCGACAAGCGCACTTCGACACC TTGACCGGTCTGCCGAATCGCCACATGCTGCGCGACCGGGTTGCGCAGGA GATCAAGAAAAGCAAACGTGACGGTCTGCAACTCGCTGTCCTGTTCATTG ACCTGGACCACTTCAAGGAAGTCAACGACACGCTCGGTCACAACAGTGGT GACCGGCTGCTGGTAGAAGCGGCGCGGCGCATCAGCGACTGCGTGCGCGA GTCCGATACCGTGGCCCGCATGGGCGGCGACGAGTTTGCCGTCATCCTGA CGGAGCTGCTTGATGCCAGCAGCCTGGAGCGCATCCTGCAAAAGATTCTG CGGGCGCTGGAATGCGTATTCCAGTTGGACGGAGAACAGGCCTTTGTGTC GGCCAGCATTGGCGTCACGATGTATCCCCTTGATGCCGGCGACATTGAAG ACCTGTTCAAGAACGCCGACCAGGCGCTGTATGTGGCCAAGGGCGCCGGG CGCAATCGCTTCAGTTTTTTCACCCCGGCCCTGCAACAGGCCGCACAAAA CCGGGTGCGGCTGGCCAACGACCTGCACGCCGGGCTCATCGGGCAACAGT TCCGGCTGGTTTACCAGCCCATTGTTGAACTCGCCAGCGGCGCCGTTTGC AAGGCGGAAGCATTGATTCGCTGGCAACACCCGACGCGCGGACTGATCAG CCCGGTCGAGTTCATTCCGATTGCCGAAGCCAGCGGTTTGATCGTCGCTA TTGGCGAGTGGGTGTTTCAGCAGGCGGCGCGCCAGGTGCAGGCCTGGCGC ACGGCGCTGGACCCTGATTTCCAGATCAGCGTCAACAAGTCGCCGGTGCA GTTTTACCAACGCGGCAAGACCAAGACGCCGTGGGCCCAGCAGTTGCAGG CGATGGGTTTGCCGGGCAACAGCATCGTGGTGGAGATCACCGAAGGGCTG TTGCTCGACACCAGCTCCAGCGTGGCCGACCAGCTGCTGGATCTGCACGA CGCTGGCATTCAGGTGTCGCTGGACGACTTTGGCACCGGCTATTCGTCCT TGTCCTATCTGCAGCGTTTTGACATCGACTTTGTCAAGATCGACCAGTCG TTTGTGCGCTACCTGATTCCCGAATCGACTGACTTGGCCCTGTGCCAGGC CATCATCGCCATGGCTCACGCCCTGGGCATGAAGGTGATCGCCGAGGGTG TTGAAACCGCGCAGCAACGCGATTTGCTGGCCGCGGCAGGCTGCGATTAC GGTCAAGGCTACTTGTTCTCGAAACCTGTTTCGGCGCCGGACTTTGAAGC GTTCATGGCTGCCCAGGCAAGCCGGACGCCTGAATTGACAGCCTAA >Rfer_2038 periplasmic sensor hybrid histidine kinase ATGAAACTGGGCGGTATCCGTCACCGGATGTTGTTGGCCGCGGTGTTGCC GGTGGCCTTGATTGCCGTCTTGCTGGCAGCGGTGTTTCTGTTCACCCGCT TCGATGACATCAATGCGGCGCACCGCCAGCGCGCCCGGTCCCTGGCCCGC CAACTCGCCACGGCCAGTGAATATGGCCTGTTTTCAGACAACGTCAGCCA GTTGCGAACCCTGGCCGGTGGCGCGCTGCGCGAGGCTGACGTGCGCTCGG TCGCCATTGTGAACGCGCAGGGCAAGGTGTTGGCGCACGCGGGCAAGCCC AGCTATCAGACACAGCCGTTGCTGGATCGGCAGGAACGTGAACAGTATGA GCCCGGCGCCGATCTGGACTTGTTGCTGCAGCCGGTTGCGGCCACCCAGG TACCACTGGACGACCTGTATCAAGCGCAGTTCGACACCGCCGGCGGCGCC GGTCAAGCCATGCCGGCGCCGCTCCTGCTCGGCCATGTGTTGATCGAGTT TTCACGCGAGTCGCTGAACCAGAGAGCGCGCCAGATGCTGTTGGCGGGCA TTGCCATCACCCTGGGCGGCCTGTTGTTCGGCGCCTTGCTGGCGGCGCGC TTGGGCCGTGGGGTGATTCGGCCCATTGCGCGGGTCTCCCGACTGATTGA ACGCATCGGTGCTGGCGAACTGTCGGCGCGCGCCGAGGTCTTGCCGGGTG ACCCCTTGCGTGAGGTGCAGCAGGGCCTCAACGTGATGGCGCAACGGCTG GAGTCCGGCCGGGATGAGCTGGAGCAGCGGATTGCCACGGCGACGCAGGC CTTGCGCGAGAAAAAAGAAGAGGCCGAGACCGCCACGCGGGCCAAGTCGC GCTTTCTGGCCGCGGCGAGTCATGACTTGCGCCAACCGATGCACGCGCTG GGCCTGTTTGTCGCCCGACTGGCACAGTTGCCGCACGATGCGCCGACGAC GCATTTGATCGGCAACCTGGATGCGTCGGTGCAGGCGCTGCAGGAGCTGC TGGATGGCTTGCTCGATGTCTCAAGGCTGGAGGCGCAGGCGGTGCAGGTG CAGTTGCGCCCCTTCCCGCTGGCCGATCTGTTTGAGCAATTGCGGGCCAG TCTGGCGTTGACCGCCCAGCAAAAGGGTTTGCGTTTGCGCGTGCGCCCGA CGCAGGTTTGGGTGCTGAGCGACTCAGCCCTGCTGCACCGTGTTCTGCTC AATCTGCTGAGTAATGCCTTGCGCTACACGCAGACTGGGGGCGTATTGCT GGCGTGTCGATCTGGCGCTGACGGCCAGCACGTCCGCATTGAGGTGTGGG ACAGTGGTATTGGCATCGCGCCAGAGCATCAGTCGGCGGTGTTCAAGGAG TTTTACCAAATTGGCAACAGCGAGCGTGACCGCAACAAGGGCCAGGGACT GGGGCTCAGCATTGTGGAGCGCAGTGCGCAACTGCTCGGCTACCCCTTGC AAATGCACTCCAGTTTGGGCCGTGGCACGCGCTTTAGCCTGTGCGTGCCA GTGGCGCCGCCCGGCGTTGCCCTTGAGCGGCGCAGTCCGCTGCGACCGCG CAACTTTGAAGACATTGCCGGCCTGCGGGTGCTGGTGATTGAGGACGATC AACTGGTGCGGGAGGCGCTGGTGAGCTTGTTGGATTCGTGGCGGGTCGAG GTGGCCGTAGCAGAGGGCTTGGCCATGGCGTTGGCGCTGCTCAAAAGCGG CGTTGCGCCCGAGGTGATCGTGGCCGACTACCGTTTGCGTGATGGCGAAA ACGGCATTGAGGTCATTCACCAGCTGCGTGCTGCTGCCGGCCAGCCGATA CCGGCCTGCCTGATCAGCGGTGATACTGACGCCACTCTGATGCAGGCGGC TGCGCTCGCATCGCTCACCCTGTTGCAAAAACCGGTGCGTCCGGCCAAGC TGCGCAGCTTGCTGCGGCGTTTGACCCGGTCGGTTCAAGCTGACGGCGGG GAGGCGGTGTAG >Rfer_1979 metal dependent phosphohydrolase TTGAACGCCACGGCCAACCGCAATATCTCCGTGGACCAGCTTCGCGTGGG GCTGTACGTCCATCTTGACTTGAAGTGGTTTGAGCATCCGTTCGCGTTTG GCCATTTCAGGATCAAGTCCGAGGAACAAATCACGCTGATCCGCAACCTG GGTCTGAAGACGGTGCGCTTCAGCCAGGAACTGAGCGAGGGCAGTCCCCC TCCCCAGGTGGTCGCGCCGCTCACCCCCATACCCAACACGGCTGCGGCTG CCAGCATGGCGCCGGAGCTGTCCCAGATCATGCTGACCAAGCAGGCCATG ATGGCGCAGATGCGGCTGCGAAGGCAGGCGACCGAGCGCATCGAGAATGC CTTTGTCAACACCGCCAAGACCATCCGCAACATCGAGAAAAACCTGTACA GCCGACCGCTTGAAACCGTGCAGCAGGCCACCCTGCTGATTGGCCAGATC ACCGATTCGATTCTCAGTGCCCCGGAACTGGCGATTCATGTGATGGGCGA CAAGATGGGGGGCGAAGAGCTGTACTTGCATTCGCTTAACGTCACCATGC TGTCGATCATGATGGCCCGCGACATCAAACTGCCCGTTGAGGTCGTGAGC GTGCTCGGCGTCGGTGCGCTGCTGCACGATATTGGGCACAAAGAAGTGCC CGACAAGATCTTGCGCAAAACCGAAGCACTGACGCAGGCAGAGCGCAGTT TCTATGAAATGCACTGCCAGTTTGGAGTGGGGATGGGTCAGCGCATGGGT CTGGCACCGGCAGCGCTGTCAATCATCCGGGAGCATCACGAGCTGTTTGA CGGCAGCGGCTATCCGGCCAAGCTCCAAGGCGAATCGGTCAGCCTGCTGT CGCGCATTGTGGTCATTGCCAATTATTACGATGAGTTGTGCAACCCGTCT GCCATTGCCGATGCGCTGACACCGCATGAAGCACTGTCCCTCATGTTTGC CAAGTTACGCAGCAAGTTCGATCCCAAGCTGCTGCAGGTCTTCATTCGAT GTCTGGGGGTGTATCCGCCAGGCACGATCGTCCAGCTATCCAACGGCGCC ATTGGCATGGTGGTGACCGTCAACACGGCACGCCCCATGAAGCCCACGTT GATGGTGTACGACGCCGAGGTGCCCAAGGATGAAGCCATCCTGCTTGACA TGGAACGTGAGACCGAGGTCAACATTGCGAAAGCCATCCGGCCGGCCCAA GTGCCGCAAGAGGTGTACAACTACTTGAGCCCGCGCAAACGGGTCAGCTA CTACTTTGATGCGTCCTCTGCACGGCCACAGGCGGGCATGCCATGA >Rfer_0469 diguanylate cyclase/phosphodiesterase ATGTGTGACCATTCCTTGTCGTACTGTCCCGATACCCTGGCCGCGCATGA CCCGGACCCGAGCCGGGAACTGGGGCCGGCGCTGGTGCAGGCCAATTTGC CCGATACCGCTGAAAAACTGGGCTTGTTCGGCCGCTGGTGGTGCGAGCCA CAGACCGGCCAATGGGTGTTGTCGACCGGGGCGGCGAGCCTGCTGGATGT CGGCGCCGGGCTTCATCCCACGGGGCACAGCTGTTTTGAGCAGGTGGTAC CCGACGATGTCCTGCGCCTGATGGCCGGCCTGCGCGAGCCGGGTCAGGCC ATCGCGTGCGAGTTTCGCATCATTAACGAGTTTGACGGCTTGCGCTGGTT GCGCATGGTCTCGGAGCCCCACCTTGCGCCCGGGCAAGCGCTGCAGACCG GCGTCGTGGTCGATGTCACCTCGTCCCGGCTGGCCGCGATGCGGGAGCGC TTTTGTTTTGAATCGACCCAGTTTCTGATCGGCACCCCCACGCTGGGGGA GGCCGTGACCAAGGTGATTCAACTGGTCTGCGACAACCTGGGCTGGGAGT GCGGCGCCTACTGGTCGCTGGAGCAGTCGCAGATGGGTGAGCATCGGCTG GCTTGCCAGCATGAGTGGCATCAACCGGACTGTCCACTGGCATCGTTCAT CGCGGACACGGCCGCCATTCGCCTGGCGCCGGGCGAAGACCTGGTCGGCA ACGTCTGGCGCACGATGCAGCCGGCCTGGGTGGAGGACATGGTCAACGAC CAGGACTTTGTGCGGCGCAAAAGTGCCCATGCGTGTGGTTTGCAGTCTGG CTACGCCTTTGCGGTTTCTTATGTCACGGTGGGCGGACGCCGTCACAGCC ATGGCGTGCTGGAGTTCTACAGCAGCCTGTCGCGCCAGCGCGAGGCTCAA TTGCCGGGCCTGGCCGCGACCATCGGCGAACTGATTGCGCAGACGGTGCA GCGCCTGGAGCAGCAGGAACTCATCCGGCAGCTGGCGCAGGTCGACGACC TGACCGGACTGGCCAACCGCAAACACTTCCATCATCTGCTGGATGCGGCG TGCCTGAGCGCCACCGCATCGAGCACCTCGTTTGCCGTCCTGAATATCGA CCTCGACCGCTTCAAGCAAATCAACGATGCCTTCGGCCACGAAGCCGGCA ATCTGGTCCTGCATGAATTCGCACAGCGCTTGCAGCGACTTGGACCGGCC GGGTCTGCGCTGGGCCGGCTGGGAGGCGACGAGTTTGCCCTTCTGGTGAC ACCCGCCGGCTCGGCCGCGCAACTGCAGGCCCTGGGTGAGCGGGTGCTGC TGGCCGCGCGCCAGCCGTTTCTGTTCGAGCGGCAGGAATTGACGATGTCG GCCAGCGTGGGGATCAGCATTTTCCCCGACGACGGCTGGACCGGCTCGGA ACTCATGCGCTGCGCCGACGCCGCCATGTACCGGCGCAAACACGGCGGCC GCAACGGCTTGAGTTTTTTCTCCAGCGGCACGTCCGGTACCCTGGCTGAG CAGCGCTCTGCGCTGGCCAGGCAACTGACGATGGAAGCCGAGTTGCAGCG TGCGCTGGTGAACCATGAATTCTTTCTGGCGTACCAGCCGGTTTTTGGCC GTGACGCCGAGCACATGGTCGCGGTCGAGGCACTGATTCGCTGGCGCCGG CCCGGCGGCGACGTGGTGCCGCCCGATCTCTTCATTCCGGTGGCGGAGCA GAGCGGCCTGATCGTGCAGATCGGCCGCTGGGTGGTCAAGCAGGCCTGCC ATGATCTGGCGCAGTTGCATCGCGCTGGCTTCACCGACTTGCAGGTCAAC GTCAACATGGCGGCGCCCGAGTTTGTCAATCCCAATTTGCCCGGCGAATT GATGGCCGTGCTGCAGGCGTGCGGGGTGGCGCCGCGCCACCTCTGCCTGG AGCTGACCGAGGGCCTGGTGATGAAGCAGCCCGACAAGGTCATTCCCGTC ATGGTGGCCTTGCGGCAACTGGGCTGCAAGGTCAGCCTGGACGATTTCGG GATGGGGCATTCATCGCTGTCGCGCATGAAGATGTTGCCGATCTCCTCTT TGAAAATTGACCGCTCCTTTGTCAGCGGCCTGCCCGATGACCGTGGCGAT GCCGCGATCGTGCGCACCATTCTGGACCTGGGGCGCCACATGAAGCTGCA GGTCATCGCCGAAGGGGTCGAGACCGACGCGCAGCTCCTGTTCTTGCGCC AATTCGGATGCACCCTGATTCAGGGTTTTCTATTGGGCCGACCCAAAACA GTACCCGAGCTGATGGCAGCTCATCCACAAACCACCCGCGACTAG >Rfer_2485 diguanylate cyclase/phosphodiesterase ATGGACAATCTCAATCAGGGACTGGACCGGCTGCTGTACGCGCTCTCGAC CTACGCACTGCCCTTCTTTATCGGATTGATGTCTTTACTGGCCCTTTTTG CCTGGAAAACGCAATACCCGGCGGCCGACCCACAACAGCTGCAAATTCGG GTGATCAAAGAGTCAGCCGCCGTGGCGGGTCCCGCTCAGGCCCTGGCGCA GTTACGGGAGAGCTCGATCAGCCAATTCCACGACACCCGGCTTTCCGAGG TTCCTGTCTGGCTGACCTTTGTAGTACCCGAAGACGTTGAACACACACCC ATGATGGTCGAATTTCCCTCGCGGCATGCCATGGACATCGCCTGCTGGGA TGCCAGGACGCTGAAAGCGCTTGGCACTGGCAATCACCAAGGCACGACTG GCGGCATTACCGCTATCAAGGCGGGTTTTGCGCTTGAACTCAGTCCAGCA CTCAAAGACGAGCAAGTGGTATGCCGCACCAGTGCTATCGGCCCGGCCCG TCTATCCGCTCTGATTTGGCGAGCTAACAATTTACAAACTTCCGCCCAGG AGTTTCACCGCAAGTCAGGCCTGCTGGATGGCGGGATCATCGTGCTGGCG ATTTTTGTGCTGGTCACGGCTTTGATCAATCGAAACCGCCTGTATGTCCT GTTCGCGGCTTGGCTCGTGATCAATCTGAGAATGGGGGCTCTTTCTGCCG GGTGGGATACGCAGTGGCTTGGCTACACGGTGCCCTACGACTGGTTGTTA CAAGGCAGGATGATCACCATTACCCTGTACTACGTGCTGACACTGATACT GTTCACGTCACTTTTCAGAGATGATTTATTGCACGTTGGACATGAGTGGC TCGTGCGTGTATTTCAGTGGACATGTTTTCCCTTGCTCATACTGTCAAGT TTTCTGCCATCCTCTTCGTATCTACCGCTGTTTTGGCCCGTTGTTGGCGC TGGCATTTCAATGTTGGCATACCTTCTGGTTCGCATTCTGCGAAAAACGC GTTCCCGTGTCGCAATGTGGTATGGCGCCGCCATCAGCATCACCTTGGTC GCAAGTTTTTACGAGGTTCTTTCTGCGGCGCTAGGCATCAAAGGACTAAT CGGATCGGTCAATAGCGTGACTGCCGCCTTGGTGTCAAGCCTGCTGGCCG CCTTGGCGATTGCCGAACAAATGCGGCACGAGCATGTGCAGCGCCTGGAA GTGCAGGCCAAACTGGAGCACACCTACGCGGCCATGCCGATCGGCCTCTT CACCCTCGACCTGCGTGGCCGCTTCACGAGTGCCAACCCCGCCCTGGTCG GCATGCTGGGACCGAATGTGCTGACCGATGGCGCCAATGCCTGGCAGCAG TATTTCACCAATGGTGCCTGGACCCAGCTGCATCAAATGGTGCATAACAA AAGTGAAGATGAAATGGAAATCCAGGGCAAACCCGTGCCTGGCTACAGTG GTTCAAAATGTTTTCTCGTCAAGGCAACGCTGGCTGGCGACAAGATCGAG GGTTCATTGCAGGACGTCACCGAAAAATCCAGGGCCACCGCGGATCTGTA TTTCCTGGCCGACCATGATTCACTGACCAAGGTGCTGAACCGGCGCGGTA TCGCGAAAGCGTTCAACAGCGCCATTGCCAGTCTGACTGACCGTAATGCA CCCGTGGCCCTGGCCTATCTTGACCTCGACCGTTTCAAGCTGATCAACGA CCTGTTTGGCCACGGGGTCGGCGATGAAGTGTTGCAGCAAGTATGCGGGC GCGTGTCGGACCTGCTTTCCCGCGAACTCCAATTTGGCCGCGTTGGCGGT GATGAGTTCGTCATCGTGTTTCCCGACACGCCCATTGCACGGGCCGCGGT CATGTGCCGCGGCATCATCGACAGCATTGACACCCTGCCCTACCATGTTG GCGAAAACGCGTTTCATGTGCGCGGCTCCATCGGACTTATCGAGGTCAGG GCCGGCATGCAGTTCAACGACGCCATGTCCACTGCCGACCGCGCGTGTCG CCAGGCCAAGTCCGGCAGCAGTGGCGGCCTGGTGGTGTATGAAAAAAATG CCATCGCGTTCAAAAAGCATGAGGCCGAGCTCAAACTGATTGCGCTGCTT GCCACCAGTTCCGCCACCGATGGCCTGTATCTGGAAATGCAGCCCATCAT GTCACTCACAAAGCCGTATGAATCGCTTAACTTTGAGGTGCTGCTGCGCA TGCGCGACATCGATGGCAATGTCGTTCCCACCGACCGGCTGATTGCTGCA GCCGAGAACAGCGGACGCATGGGCATGATTGACCGCTGGGTCTTGTCCAC CACGCTGGCCTGGCTCAACACCAATTACACGCAACTGAAGCACACGAAAT TCGTCTGCATGAATTTGAGCGGTGCTTCACTGAATGATGAGAAGTTCCTG CAGGAGGTGTATGTCATGCTTGAACAAAACCTGCATCTGGTTGGGCAACT GTGCCTTGAAATCACCGAAAGCGTGGCCTTGCACGATCTGGAAAATACCC GCCGCTTCGTCAACAAGGTGCGCGGCTACGGTGCCAAAGTGGCGCTGGAC GACTTCGGCGCCGGTTACACCTCATTCTCTTACTTGAAGGAGTTCACGGC AGACCTGCTGAAAATCGATGGCAGCTTCATTGTCAACATGAACAAGCACC CAGCCAACATCGCCATTGTCGAAGCTATCGTTAACCTCGCCAAAAACCTG GGCATGAAGGTGATTGCCGAGTGGGCCGAGGACAATGCCACGGTGCAGAC CCTGACCGAGATCGGGGTTGATTATGTGCAGGGATTTGCCGTGGCACGAG CCCAGCACCCTGACAGACTGCTCAAAGCCGAGTCTTCGGCAAGCTTTATT CAGGACGAAGCGCTGGCCCAATATGTGTGCTTGATTCAAAAGTCAAACCA GATGCTGCCGCAAGTGGATATGTTTTCCGACGTGCGCGTCATCAACATGC ATTGA >Rfer_1874 histidine kinase ATGGATGTACTGAACGTTGCCAAACACGGCAACTCTGTCCTGCTGCTGGC TGGTGTCGCCGCCGTGGTGTCGATGATTATCAGTCTGTTGGCGATCTTCA TGTATTGGCGCCAGCGTTCAGTGATTGACAAGCTGCGACAGGAGTTGCAA CGCACCGTTCAGGTCGGACGTGATCGACTCGAAACCGAGGTCGCGCTTCG CACGGTGCAACTGACCGAGTTGACCCACCATCTGCAGACTGCGCGAGAAG ACGAGCGTCATCGCCTGGCGCGTAATTTGCACGATGATTTGGGTGCATTG CTGACATCGGCCAAGCTTGATGCGGCCCGCATCAAATCGCGCCTGGCAGA CCGGGCACCCGAGGCGCTGGAACTGTTGGCACATCTGGTTAGCACACTCA ACAGCGGCATTGCACTCGGGCGCAGCATCATTGAAGACTTGCGCCCGTCC GCCCTGAGCAATCTGGGCTTGGTGGCGACGCTCGAAATTCTGACGCGTGA GTTTGCTGAAATCTCAGGTGTCGCAGTTCATTGCGAACTGGAGCCGGTAG AGCTTGAAGTCAGTGCCGAGCTGATGGTTTATCGTCTGGTGCAAGAGGCC ATTACCAATATCACAAAGTATGCCCGAGCGCAGAATGTTTGGGTGCGCTT GGCCACAGACAATGGCCAGGTGGAAGTCTCGGTTCGTGACGATGGGATTG GCTTTGATACCAGCGTGCAGCCGCGTTCTGCCTATGGCTTGGTGGGTATG CGTTTTCGGGTTGAGGCCGAAGGCGGAACCCTGGCCTTGGTATCGGCGCC GGGGCAGGGCACGTTGATTCAAGTGAACCTGACGCCAGTGCACGGGCGAC ACGACCGTAGAAACAACGCAAGGCCAAGCTGA >Rfer_1888 CheC, inhibitor of MCP methylation ATGACGATCACTGGCGCCCAGCTCGACGCATTGACCGAGATATTCAACAT TGGCGCCGGGCGCGCGGCGTCCAGCCTGAGCGACATCGTGGGCGACGAAG TCCTGCTGTCGGTGCCCCGCGTCGAGTTTTACCGTGCCCACGAGGTCAAC GCCAAAGTGTTGTCGCTTTCCTCGGCGCGACTCGGCTCGGTCAAACAAAA ATTCAGGGGGCCGTTCAACCTGACAGCCTCCCTCTTGTTCACCGAAGAGC GGGCCCTGGAAATTGTGCAGGAGATGCTGGGCTCGCAAGTGCAGAAAGAG GACTTGGTCGAATATGAACAAGAGGCCATGTGCGAGGTCGGCAACATCAT TTTGAACGCCTGCCTGTCGGCCATGGCGGACATGCTGGGCATTTCCTTTG AAAGCACGCTGCCCGAGTATTCGAGCGCTGAGCCCGACGTTGTCATTGAA CGCCTGGTCGCCGACGCCGACAATCCATTGATGCTGGTTTTGCACATCAA TATGCTGATCGAAAAGCGACGCAGCCAGGGAACCCTGATTTTCTGGTTGA GCTCCTCGTCTTTGCAGGAACTGATGCTTCATCTTGAACAGTTCGTCTCC CGTATCTAG >Rfer_1486 two component transcriptional regulator, LuxR family ATGAACCAACCCGCTATTCACATAGTTGACGATGACCCGGACATTCGGGA TGGACTGGCCTGGCTGTTCGACTCGCGCGGCTACGTGGCAGCCACGTGGG ACGGCGGCCCGGCGTTTTTGGACGCGGCGAAGGCGATGCTGGGTCATTGG GGTCATGCGGTGGTGTTGCTCGATGTCCGCATGACGCCCTTGTCCGGGTT GGTCACGTTTGAGCGGCTCAAGGCGCTGTGTTGCCCCTGGCCCGTGTTGT TTTTGACCGGCAACGGCGACGTTGGCATGGCGGTGGCGGCCGTCAAGAGC GGTGCCTGGGATTTTCTGGAAAAGCCGTTTCAGGACAATGAGTTGGTCGA CCGGGTGGAGCAAGCGCTGGCGGCGGCGTCAGCGATCAGTGACACCGATC TGGAGGTGTATCGCCTCAAGCAGGCGCTGACCAGTCTGAGTCCGCGTGAG CGTGAAGTTCTGGATGAACTGATTCGCGGTCACTACAACAAGACCATTGC GGACCATCTCGGCATTACCCCACGCACCGTCGAGTTCCACCGATCGCATA TTTTTGAAAAAATGGGCGTCAGTTCGGCGGTTGAGCTGGCCCACAAGCTC GGGCGCCTGCAGCCGTTGTCGATCATCCAGCCGCCGCAGACTTGA >Rfer_1371 response regulator receiver domain protein GTGAATACGACTGGATCGACTTTCAAAGTTCTGGTGATTGACGACAGCAA CACCATCCGGCGCAGTGCCGAGATTTTTTTGAAGCAAGGCGGACACGAAG TCATGCTGGCTGAAGATGGTTTTGATGCCTTGGCAAAAGTCAATGACTAC CAGCCCCAGCTCATTTTTTGCGACATCCTGATGCCCAGATTGGATGGCTA CCAGACCTGTGCGATCATCAAGCGAAATGCCAAGTATTCAGACGTGCCCA TAGTCATGTTGTCGTCGAAAGACGGCGTTTTTGACAAAGCACGCGGACGC ATGGTCGGGGCGCAAGATTACTTGACAAAACCATTTACCAAAGACCAGTT ATTGCAAGCTGTACAGCAGTTCGGCAAAGTGGCGCAAGGAGTTAACTGA >Rfer_3572 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGACAGAAAATCTGATCAATTTTCAATTGATTCTCACCACCATCAGCGA TGGCATCGTGGTGGTGGATCAGCGTGGCGTGGTGCTTTATGCCAATGAAA GCGCCGAGCGCCTGTTCGAGCGTGGCGAGCTGGTGGGTAAAGATCTGGCC GTGCCGATCCACTCCGGCGAAACCCGTCAAGACATCAACCTGATTCGCCC CAGCGGCATTGGCTGGGCCGAGTTGCGCTCGGCCCCCATCACCTGGGACA AACAACCGGCTTTCGTGATTTGTGTGCGCGACATCACCGAGCGCAAGACG TCGGACCTTGGATTGCATCTGGCCGACACGGTGTTTGACAGCACCCGCGA AGGGCTGATGGTGACCGATAGCGCGCAGCGCATCGTGCGCATCAACCCCG CGTTCTCCGAGATCACCGGGTACAGCGCGGCTGACGTTCTTGACCAAACG CCGGCGCTGCTGCGCTCGGGTCGGCATGACAGCGCGTTTTACGCGGCGAT GTGGGACAGCATCAACGTCAGCGGGCATTGGCAGGGTGAAGTCTGGAATC GCCGCAAAAACAGCGAGATTTATCCGCAATTGATCAGCATCGACGTGATC AGGGACCACACCGGCAGGGTCTGCAATTACGTGGCGGTGTTGACCGACCT GTCCAAACTGCGCAGTTCGCAGCTGGAGCTCGATTTCCTGGCCCACCACG ACCCCTTGACACGCTTGCCGAACCGCTTGTTGCTGCTGTCACGGTTGCAG CACGGCATTGAGCTGGCGCAGCGGGACGGCACGCATCTGGCGCTGCTGAT GCTTGATCTGGATCGTTTCAAGGACATCAACGACAGTTTTGGTCATCTGG TGGGTGATGAGTTATTGCAGCTGGTGGCCACCCGGCTGGTCAAGCAGGTG CGCACCATCGACACGGTCGGCCGCTTTGGTGGCGACGAATTTTCCGTGTT GATGGAAGACGTGGCCGGGGCCGAACAGGCGGCGCGGGTGGCCAATGACA TCATCCGTGTCTTGAGCGAGCCCTATGGCTTGTCCAGCGGCGTTGAAGTG CGCATTGGGGCGAGTGTGGGCATCAGTATTTATCCGGACAACGGCCTCAC GCCCGAGTTGATGCTGCAACAGGCCGACAGCGCGTTGTACCAGGCCAAAA TCGAAGGGCGCGGCCGGTTTGCGTATTTTTCCGAGAGCCTGACCCAAGCC GCGCGTGCGCGCATCGACATTGAAGTGCGTTTGCGCCGCGCCATCACGCA GGGCGAGCTGCGCGTGTATTACCAGCCGCAAGTGGACATCCCCAGCGGGC GCATCGTCGGTGCCGAAGCCTTGGTGCGCTGGCAGTGCCCGATCGAAGGC CTGGTACCGCCGGCGCGCTTCATCACCATCGCAGAGGCGACCGGTTTGAT CGGCGAAATCGATGACTGGGTGTTGCGAGAAACCTGTCAGCAAGGTCAGC GCTGGCGCGCGGCGGGCCTGCCCACGCTCACCCTGGCGGTCAATCTCTCG GCCTACCAGTTTTTGCAGGGTGACATCAGCCAGACCGTGGCCCAGGTGCT GCGTGATACCGGATATCCGGCGGCGTTTTTGGAACTGGAGTTGACCGAAA GCGCCCTGATGCAGCGTGAAGCCCAGGCCATCCAGATGCTCGACCGGCTC AAAGCTCTCGGTGTGCGCCTGGCGATTGACGACTTTGGCACCGGCTACTC GTCACTGGCTTATCTCAAGCTGTTTCCCCTGGATGTGCTGAAAATCGACA AGCGCTTTATTGACGATATTCCGGCGCACCGCGACGACATGGAAATTGTC ACGGCCATCATTGCCATGGCGCACAGCTTGCGCCTGAAAGTGCTGGCCGA GGGGGTGGAAAACAAAGAGCAGCTGGCCTATTTGCAAACCCAGGGCTGCG ACCAGTTCCAGGGTTATCTGACCAGCCGCCCCGTGCCCGCCGCAGAATTT GAGAAATTATTCCTGAGCGGGCGCTAA >Rfer_3645 periplasmic sensor signal transduction histidine kinase TTGAGCTGGCGTGCCTGGCCGTCCAGCCTGTTCGTGCGCATGGCGCTGAT CCTGCTGTTGGGGCTGCTGGTGGCGCAGGGGCTTAGCTTCTGGCTGCAAT GGGGCGAGCGGGCCACGGTGGTGTCGCAGGCGCGCGGGCAAAATTTTGCC GATCGCATGGCGGAGGTGGTGCGCGCGCTGGAGGCCACTGCGCCCGCCGA GCGCAGTGCTGCGCTCGCAACCATGCCCCACGGCGATTGGCAAGTGACAT TGATCACCGAGGACCAGGTGTCACAAAACCCGCCACGCGGCGCGATTGGG GCCATGCTCAGCGCGCGCCTGGGCAGTGCGCGTGAAGTTCGCCCGCTGGG TGGCGCCGCGGGCATGGGCATGATGCACGGCAATATGCCGCGCGGCTTTG ATGTGCGCTTGCAGGGCGGTCAATGGCTGCGGTTCTCGGGCGCACGCCAG CTTGACACCCCCGCTTTGCCGCGCGATCTGATCCTGCGCCTGGCGGTCAC GCTGATGATCGTGACGGCGGTCGCGATGCTGGCCGTGCGGCAGGCGACCC AGCCGCTCAAACAACTCGCCCAAGCCGCCGACACGCTCGGGCGTGACCTG GATGCGCCTGCCCTGGCGGAAGAGGGCCCGACCGAGACGCGCCGTGCCGC GCAGGCCTTTAACCGGATGCAGGCACGTATCAAACGCCTGGTCAATGAGC GCTCACGCGCACTGGCAGCGGTGTCGCATGACTTGCGCACGCCGCTCACC CGCCTGCGCCTGCGTGCCGAGCTCGTTGACGACGAAACGCTGCGCGACCA GATGGCCGCCGATCTGGATGACATGGCCGCCATGATTGATGCCACGCTGG ATTACCTGCGCGGTTTGCAGGCCAGCGAAGCCGTGCGCCCGATTGACATC AATGCGCTGCTGGCCAGCATGAGCGAAGACGCACTGGCGCTCGGGCGGCC AACCAGCATCCAGGGCCAGGCGCTGGCGCCTTATACCGGGCGCTTGCTGG CCCTGCGCCGCGCGCTGCAGAACCTGATCGACAACGCCATCAAATACGGT GCTTGTGCGCATCTGCGCGTTGAAGATGACGCCAATGAATTGCGCATCAT GGTCGAAGACGAGGGGCCGGGCATCGAGCCCCATGAACTCGCCCGCGTCA CCGAGCCCTACTACCGTCCCGATGCGTCGCGCAGCAGTGCGACCGGCGGC GTCGGGCTGGGCTTGTCGATCGCCAAGGACATTGCCCTGCTGCACGGGGG TGACCTGGTGCTGGTCAACCGGGCGCAAGGCGGCCTCTGCGCCACACTCA AGCTGCCGCGTCTGGCGGGGGCTGCGGCTTAG >Rfer_0781 putative signal transduction histidine kinase ATGAACCCTTCTCCTTCGACCCAGAAATTCACAACGGGGCCGACGTCCGG CACAGGGCTTTCTGTGGAGATACGACGCTTTTCGGCCGGCATGCGGGTCA TCACCGCGCTGCTGTGTACCGTGCTGTTCTTCTCAACCGAAAACAATATC GACGCCAGGGTACTTGCGGTTTTGTTGGTGTATGGCTTGTGGTCTGCGTG GCTGCTCTGGGTCGAAGCCAGCGGGCGTGGGCTCCGATCCGCGCTTTGGT CGTACTGGATTGATGTCGCATGGTCATTGATGCTCATGAAGCTTTGGAGC GCTGGCGCCCTGCTGATGCTCATCACCTTGGTGCAACCCGTGGTGCTGGC CAGCATTGGGTACGGCATCACGCAAGGCTTGCTACTCTCGGCGCTGGCGA CATCGGGCTTGATAGCCTACAACGGCAGTGACCTCATGAGCGGCCCCAGC CTCGGATGGCACCGACACATACAGATCATGATCATGCTGGCGTTGGCCCC ATCGGCAGCCCTGATCGCGCGGCCGATGGGCATACGGTTCCGCTGGTCGA CGCTGCTCAGCCAGCTCGAAGCCCAACTGGACCCGCGCCACGGCCTCAAT CCGATTTGCGCCGAGCTGGTGGAACGCCTGCGTGGCGCCACCCAGGCCAA TGTTGTCGCGCTCGTGTTGCCCAGTAGCCAGGGCGCTCCGGCGATGATCG CCAGCCGCGAAGACGGCAGTTTTCGCGCGAACGCGGAGGTCCACGCGCGC CTCGAAGCCTTGCTGGCGCAGATGCCGGCCTGCACCGTGAGCTACGTCCG GCGCCCCTGGTGGGACCCGCGACCCAGCACGCGGCTGCACGCCGACTTGC CCTTGCCCGCCGGCCTCTCGACCCCGCTCGCGGAGTTGGCCCTGACATTG GATGTGCGCTGTCTGCACGCTCTGTCGCTGACCCGTTATGCGCACCAGCA CGGCCACATTGTGGTGGGCTACAGCAGCCAACGCGGCGCCGTTTATGACG TATCGGCGCTGGCCGACGTGGTCCCCGAACTGCTGCGCGTGGTCGAGCAG GCCGCGCTGGTTGACCAGTTGCAGGAGGAAAGTGCCGGCCACGAGCGGGC GCGTATTGGCCGCGACCTGCACGACAGTGCCATCCAGCCTTACCTCGGAC TGAAATACGCGGTTGAATCCGTTGCCCTGCGCATCCCGCGCGACAACCCG GCCCGTGCCGAGATCGACTCATTGGCCGAATTGGTGAACGGCGAAGTGGC CGCGCTGCGTGAACTGATTTCGGGCCTGCGTACCGGCAACGACCAAGGTG ACAACGCCCTTGTGCCCGCCGTGCGGCGGCAGGTGCGCCGGTTTTCGGTG CTGTTCGGCATCGACATCGTGCTCGAGTGCCCGGACAAGCTGCCCACCAC CCGCGTCATGGCCAGTTCGCTGTTCCATCTGGTCAACGAGGTGCTCAACA ACATCCGCAAACACACTGCAGCGCGCCATATCTGGATCACACTGTCCCTC CAGGCGTCAATGATCAAACTCGTGGTCCGGGACGACGCGGGTAGCCTGCG CGGGCACCCGGCTGATGACTTCCGCCCGGCCTCGCTCAGCGAACGCGTCG CGGAGCTGAATGGCACCCTGCACATCGGTCGCCCGGACGGGCTGAACACC GAGCTCGTGATACAGATTCCCCTCTAG >Rfer_2732 two component transcriptional regulator, winged helix family ATGAGCCAAGTACCCAGCCGGAACGACAAAATATTAATCTGTGATGACGA TGTCCGCATCCGTGACCTGCTGCGCCGGTATCTGACACAAGAGGGGTTTG ACGTGTTGCAGGCCGAAGACGGCAAGTCGCTCACCCGCCTGCTGGTGCGT GAACCGGTGGACCTGATCGTATTGGACCTGATGATGCCCGGCGAGGACGG CCTGTCGATCTGCCGACGCCTGCGTGCCGCCAATGACCGCACCCCCATCA TCATGCTGACAGCCAAAGGTGAGGATGTGGACCGTATTGTTGGCCTGGAA GTTGGCGCCGACGACTACCTGGGCAAGCCATTCAATCCACGCGAACTGCT GGCGCGCATCCACGCTGTGCTGCGACGACGCCCGACCCAGGAGGCGCCCG GTTCGCCCGCCAGTGACAGCGCGGTCGTGACTTTTGGGCCGTTTACCTTT GACCTGGGGGCTCGCACACTGCGCAAAGACGACGAGGACCAGCCTCTGAC CACCGGCGAATTCGCCATGCTCAAGGCGCTGGTGCGCCATCCGCGCCAGC CGCTGTCGCGCGAAAAACTGGCGCAGTTGGCGCGTGGCCGCGAGTTTGAA CCCTTTGACCGCAGTCTGGACGTGCAGGTGTCGCGCTTGCGCAAACTGGT TGAGGTGGACGCCGCCGCGCCACGCTACATCCAGACCGTCTGGGGTGTGG GCTACGTTTTCGTCCCTGATGGTGCGGCTTGA >Rfer_3666 protein tyrosine phosphatase ATGAATATTCTCTTTTTGTGTACCGGTAATTCCTGCCGCTCGATCCTGGC CGAGGCCACGTTCAATCACCTGGCACCCAAAGGCTGGCACGCCATGAGCG CGGGCAGTCACCCCAGCGGCTATGTGCATCCGCGCTCACTGGCCTTGCTG GCGCGTGAGGGCATTGCGACTGCAGGCTCTGCCAGCAAGTCGTGGGACAA CTTGCCGCAAACGCCAGACATTGTGGTTACCGTGTGTGCCAACGCCGCCG GTGAAGTCTGCCCGGCTTACCTGGGCCCGGTGTTGCGCACCCACTGGGGT GTCGAGGACCCGGTGCACGCCGTCGGCACCGACGCAGAAATTGATGCCGC CTTCATGACGGCCTACCGCATCTTGCGCGCGCGCATTGAAGCTTTTTTGG CGCTGCCGCTGGATGCGCTGCAGCACTACCCGCAAAAGCTCAAGGTCGAG CTGGATCACATTGGCACTTTGCTGCCGGGTTGA >Rfer_1738 putative sigma E regulatory protein, MucB/RseB ATGGCTGGATTGCTGCTCATGGTGCTGAGCGCCACAGCAATGGCTCAGAC CACGATTGCCGCTGCGGCGCCTGCGGCTGTTGACCGACCCGTCGCTGAGC GCAGTGTCAGCGACTGGTTGCAGCGCATGCACGATGCGTCGCGCCAGCGC GCCTATGTGGGCACATTTGTGGTTGCGGGGGGAGGGCGCTTGTCAAGCGC CCGCATTTGGCATGTCTGTGATGGCATGCAGCAAATGGAGCGCGTAGAGT CGCTGACGGGCGCGCCGCGCTCCACGTTTCGCCGCAACGACCAGGTACTG ACGTTTTTGCCCGAGAACCGGGTGGTGCTGGCAGAAAAGCGCGAGTCATT GGGACTTTTTCCGCAGTTGCTGCAAGCAAACAATGCTGCCATTGCGCAGT ATTACCGTGTTCACGAGTTTGGCCGCGATCGGGTGGCCGGTTTTGAAGCC GATGTATTGGAACTGCAGCCGGTCGACAGCTTGCGTTTTGGCTATCGGGT CTGGATCGAGAAAGATACCGGATTGATGGTCAAACTGCAAACTCTGAACG CGCGGGGGCAGGTGCTGGAACAGGCGGCTTTCTCCGACTTGCAATTTGAC GTACCGGTCAGCATGGACAAGCTGGCGCAAATGATGAGCCACACCGAAGG CTATAAGCTTGAGAAGCCTCAGGTGCGTAAAACCACGGCCGAAGCTGAAG GTTGGGTTTTGAAGCAAGTAGTACCTGGTTTTCAGCCCATGAGCTGCTAC CAGCGCTCAGTGAAGGGCAGCGCCCCAAGTCAGTATGAGCACACCTTGCA ATGGATTTTTTCCGACGGGCTCGCATCGGTTTCGCTTTTTATCGAGCCCT TTGTTGCCCGGCGTCATGGCCAGCCAGCTAGCCAGGCCATGGGCGCCACA CACACCCTGACGCGTCGTTTGGGGGACTGGTGGCTCACAGCTGTTGGCGA AGTTCCGACCGAAACCCTGGCGGCTTTTGCGCAGGGGCTTGAGCGGCAGA AATGA >Rfer_3821 periplasmic sensor signal transduction histidine kinase ATGAGTTTGCCACCGTCGCATTCGCTGCGCGGGCGATTGCTTTGGCTGCT TCTGGTCGCCATTATTTTCCTGGCCGGGGTGCAAGCGGTCATCGCCTACC GAACGGCTTTGGCTGAGGCGGATGTCATTTTTGATTACCAAATGCAGCAG ATGGCCATGTCGCTACGCCCCGGCTTGCCGGTAGGTGGCGGACTGGATGA GTCGTATGAAACCAAAGATGAAGAGAACTTTGATTTCGTGATCCAGGTGT GGACCGCTGACGGTTTGCGAGTGTTCCAGTCAAGCGCACGGGCTGAATTG CCCCAGCGCGCCGTGCTGGGGTTCTCCACCGTTCAAGCGCGGGGTACCAC TTACCGCTTGTTTTCGGTCGCCGCCGGCGCGCAAGTGATTCAAGTGGCAC AGGATATGGCGGCCCGTCGTGAAATGGCCGGGACTTTGGCCCTGCGCACG GTCAGTCCCATGGTGCTCATGGTGCCTCTGTTGATGCTGGTGGTTTGGTG GGTGGTCAGTGCCTCGCTGGCGCCCGTGTCACGGGTGCGCAGGCAAATCG CGACACGCCAGGCCGATGAGCTGGGCGAATTGAGCGAGGATGATTTGCCC GATGAAATTCGTCCTCTTGTTCATGAATTGAACCTTTTGTTCCACCGGGT ACGTCAGGCCTTTGATGCGCAAAATAACTTTGTGGCTGATGCCGCGCATG AGCTGCGTTCACCACTGGCGGCGCTCAAGCTTCAAGTGCAGGGCTTACGC CGTGCTGCTGACGACGCAACGCGTGATGTCGCCATCAACCGCCTCAACGC GGGCATCGACCGTGCTACGCGGCTGGTTGAGCAGTTGCTGGTACTGGCGC GACAACAATCGAACTCCGCGCTGGGCGCCAAAGCGGTTCCGATTGACTTG ACGACCCTGGCACGACTCGCGCTGGCCGACGCGGCTGGAGCGGCGGCCGC ACGCCAGATTGACCTCGGCCTGGCGCAGGCAGATCCCGGCATCGTGATGG GGCATGAGGAAGCGCTTCGCATCCTGATGCGCAACCTGCTCGACAACGCC ATCAAGTACACACCCGTGGGCGGAACGGTCAACCTCGCGATCCGCGGCGA GGATGGGCAGACGCTGTTGACCGTTGACGACAGTGGTCCCGGTATTGCCG CAGAAGATCGCCAGCGTGTGCTCGATCGCTTTTATCGCGTCGCCGGCACC GAGGGCAGCGGCAGCGGCCTGGGGCTCGCCATCGTCAAGACGATTGCGGA CTTGCACCAGGCGACGCTGTCCATTGACCGCTCTGAGAGTCTGGGCGGCC TGCGCGCGACGGTCACGTTCACCCGCGTGTCGTGA >Rfer_3475 diguanylate cyclase with PAS/PAC sensor ATGCCCGCCGAAATCACGATCGAACGAATCATTCATCCGCATATCCTCAC CTGCACGCCCGATACCCTCTTGTCCGATGCAGCGCAACGCATGGTGGAAA CGCGTTGTAGTTCGATTCTGGTGGCCGTGGACGGGGCCATCGTCGGCATC TGGTCGGAGCAAGACGCGCTGGCATTGGATATAACCACCCCGCAGGCATT CCGTTGTCCCATCGCGCAACACATGACATCCCCGGTGAAAACCATCAATG TCAAAACCAGCCTCGGCGAGGCTGCCCTGCGTTTCCGGGAGGAAAAGGTG CGCCATTTCCTGGCAGTGAACGATGACGGAAAACATAAGGGCATTGTCAG CCAGACCGATATCGTGATCAACCAAGGAATCGAATACTACATTTCCTTGC GCGAAGTGCAATCGGTTCTGAATCGCCAGTATCCGATCATCCCGAGCGCG GCACCTTTGGGCGAGGCTGTGAGAAACATGCACAGCGGCCGCTTCGATGC CCTCATCACGCAATACCCGGACGGTGATTACGGCATCCTCACCGAGCGCG ACGTGGTGCGCCTGATCAGCGGCGACAAGCCGATCGCCATCGTCGGCGAG CTTGCCAGCCGGCCGCTTATTTGCGTTCCCGGCGCTACCAGCCTCTATCA AGCGCGCAACCTGTTTATAGACAAGCACATTCGCCACCTCGGCGTCACCG GCAGCGACGGCAAGCTGTTGGGGCTGGTGACGTTCGCCGAACTGCTGGCG AGCATCGAGCACGACTATATTCGTGAGTTACGCGAAACACTCAAGAAACG CGAGCGCAGTCTGGTGATTTCCAAGCAGCATCAGCGCCTGGCCGCCAAAG TGTTCGAGAGTACGTTCGAGGGCATCATGATCACCAACGCCGAAAGCGTG ATCGAATCGGTCAACCCGGCTTTTACCCAGATCACCGGCTTCATGGCGCA TGAAGTGATCGGCAAGACCCCGGCCATCCTTTCTTCTGGCAAGCACCAGG AAATTTTTTACCGCAAGATGCGCGAAGATATAGCCGCCACCGGCCATTGG CAGGGAGAAATCTGGAACCGGCGTCGCACCGGAGAAACCTATCCGGAATG GCTCACGATCAACGCCGTCAGTAACGATGACGGCGAGGTCACCCATTATG TCGGCGTTTTTTCCGACATCACCACACGCAAGGCGGCGGAAGAACAAGTG CTTTTTCTCGCCCACCACGATGGCCTTACCGGCCTGCCCAACCGCGCCTT GTTCGCCGACAGGCTGCACCAGGCTATCGTTCACGCCCACCGCGACCGGG CCAAGGTGGCGGTGATGTTCCTTGATCTCGACAACTTCAAGCAGACCAAC GATACCCTGGGACATCACATTGGCGACCAACTGCTGCAAATGGTCGCGCA ACGCCTGACCAACTGCATGCGAGAGGGCGACACCGTTGCACGCCTGGGTG GCGACGAATTCACCGTGGTTCTCGAATCAATCACCAACACGGGTGACATC GCATACCTCTCGCAAAAAATCATCGATACCGTGTCCCATCCACTCCTGCT CGATGGACATGAAATCGCCGTGACCTGCAGTATCGGTGTCAGCGTCTATC CCGACGACAGTGAAGAGTCCGATGACTTGATCAAGTATGCCGACACGGCG ATGTACCGGGCCAAGGAAGGTGGGCGCAACAATTTCCGGTTTTTCATCGC ACCGGGAAAGAAATAG >Rfer_0752 HPr kinase GTGCTTTTTGACGAGTTTCGTGGCGCCCTGAAGTGGGAGTGGCTGGCGGG ACTGGGTGCCTCGGAGCGCCGCTTCGACGAGGTGGCGGTGCGTGCCGCAC GCTCCGGCGCCGATCTGGTGGGCCACCTCAATTACATCCATCCCTATCGC ATCCAGATCTTGGGCCAGCGCGAGATTGCCTATCTCACCAACTCGACGCC GGACGACTGCGCGCGCCGGATTTCCCGCATTGTCACGCTGGAGCCACCGG TACTGATTCTGGCCGACGGGCAGGATGCGCCGCAAGCCCTGTTGTCGATG TGTGAACGGGCCCAGATTCCGATGTTCGCCACCGCGAGCTCATCGGCTTT TGTGATTGATGTGCTGCGCGCCTACTTGTCCAAATATTTTGCCGACCGCA TCACAATGCACGGCGTGTTCATGGATATTCTGGGCTTGGGTGTGCTGATC ACCGGGGAATCGGGACTTGGCAAAAGTGAGTTGGGCCTGGAGCTGATCTC GCGCGGCAATGGCCTGGTGGCCGACGATGCGGTCGACCTGTACCGCATCA ATCAGGACACGATTGAGGGCCGCTGCCCCGAGTTGCTGATGAACCTGCTG GAAGTGCGGGGCATTGGGCTGCTCGATATCCGGGGCATCTTTGGCGAAAC CGCCGTGCGACGGCGCATGCGGCTCAAGCTCATTGTGCATCTGGTGCGCC GGGAGACGATGGAGCGCGACTATGAGCGCATTCCCTACGAGCCGCTGACC CAGGATGTGCTTGATGTGCCGGTACGCAAAGTGGTGATCCAGGTGGTGGC GGGGCGCAATATTGCGGTGCTGGTGGAAGCTGCCGTGCGCAACACCATCC TGCAATTGCGCGGCATCGACACTTACCAGGAATTTGTCGAGCGTCACCGC AAGGCCATGAAACTGAGCGAATGA >Rfer_1703 transcriptional regulator, Crp/Fnr family ATGACCCGTCGACAAAAAAAAGCCATGTTTGTCACCCCACTCGAAGTTCT TGTCGAACCCCTTTCGACCCTGTCTGCACGTCCAGGCGCGGGTCCGGCGA AGGCCGCCGTGGTCAACGCCCGTTGCGCGCACTGTCATCTGCGAACGTGG TGTTTACCCAGCGGCACGGAGAACAGCGATGCGGACTGCATCAACAGTCT GCTGTTTGGTCGACGCAAGATCAAGGCCGGTCAGAACTTGTACCTGGAGG GACAACCGTTCCAATACCTCTACGAGGTGCGCAGTGGCAACCTGAAATCT AGCCTGAAGACGTCGGATGGGTCCGAGCGGGTCAGTGCCTTTCACATGGC GGGAGAGCTGATTGGGCTGGACGGCGTGGCTGAAGGCCAGCACGCCAGCA GCACCACCGCGCTGGAAGATAGCGAGGTCTGCGCCGTTTCCTACGCACTG TTGACCGAATTGGCGGGCAACAATGCCCAATTGCAGCGCACGCTGATGCA GCATATGAGTCGCGAACTCGTGCGTGAACTTCGTTTGCTGATGCTGCTGG GTGGCATGACGGCCGAGAAGAGATTGGCAGCCTTCTTGTTGAACCTGTCG CAACGGCTGTCGGCCCGGGGCTATTCGCCGAGCGAGTTTCGAATAAGGAT GACACGGGCCGACATCGGCAGTTATCTGGGTCTGACGCTGGAGACCGTCA GCCGTACCTTCTCTGCGTTCCAGAAGCTGAACCTGCTCGAAGTCAAAACC CGCCACATCCGGATCACTGACCTGGGCGGCCTGACGCGCATCGGCGATGT GCATGCGCCGGCAACTACCAAGCCATCGTGA >Rfer_2148 UspA ATGACGCCGATTCGCAACATTGTGGTGGCTACCGATTTCTCACCGGGTTC CAACGCGGCCGTCGATCGGGCGGTGCTGTTGGCCCAGACCCATGGCGCGT CGCTGCGCCTGCTGCATGCGTTCGATGTGAGTGCCTGGCACAGCCTGCAG GGCGTCTTTGATCCGCATCGTCTTGCCAGAGAGCCACCGCCGGATGTTCA GATACAGCGGCGTCTGACCGAGGTGGCGGCATCGCTGGCCGCCAAAACCG GGCTGCAGGTTGAAGCACGCTTCACCGTTGGCAAGGCAGCAAGTGCCATC AACGCCTACGTCAATGCCCACGACACCGCATTGCTGGTGATCGGTTCACG CCCCGAGCCGGGTCTGTTGGGACTGGGCAGCACCGCCTCCAGGCTGCTGC GCTCGCCGACCTGCCCAGTGCTGACCGTCCGCTGGGGTCATGCCCGGCCT TATGCCAAGGTGCTCGTCGCAGTTGATTTGGGCGCGGATGCGATGCGCGC GGCAACTTTTGCCGTCGCCGGGTTTCCGGCGGCACAGCATCATTTGGTCC TGGCGCTCGCCCCTGCACTGGAGCGCGCCGCGTGGCTACAGGCCCTGGCA CAGGAGGAGTTAGCGGGGCCTCACGATTCGATGCGCGCGCAGGCGCTGCG CCAACTGGAGCAACTGGCGCTGACACTGACCCGGCAAACCCAACATCCGG TGATCGCGGAGGTACTTGAAGACTCGCCCGCACGCGCCATCCTCGAGCGC GCCGCCGCACTGCCTGCGGATTGCGTAGCCGTGAGCCATCATGGCCAGGG CGCAGGCGCTGAGCGTCTGCTGGGCAGCATGGCCCAACAGGTGCTGCAAC ACACCCTGCGCGATGTGCTGGTCGTGCCATGA >Rfer_3743 two component transcriptional regulator, LuxR family ATGATCAAAGTTTTGATTGGTGATGACCACCGCATCGTGCGTGAAGGCCT GAAGCAGGTGCTGGCCGATGCGCCCGATGTGAGCGTGCTGGCCGAGGCCG CCAGCGGGCCGGAGGTGCTGGCGCAGGTTCAGGCACTGGGCGGCTCCGCC GGGCTGGACCTGGTGCTGCTGGACATTGCCATGCCGCAGCAGGACGGGCT GGAGGTGCTGCAAATCCTGCGCCGCACACACCCAACCCTGCCGGTGCTGA TGCTCAGCACTTATCCGGAAAAACAATACGCCGTGCGCTGCATCAAGCTG GGCGCTGGCGGCTACCTGAACAAGAGCGCCGACCCGGACGACATGGTGGC CGCCGTGCGCAAGGTGGCGGCAGGCGGCATGTATGTCACCCCCGACACGG CGGAGGCGCTGGCGGCGGCCATGGCATCGGCAGGGCGATCCGGCGCAGCC GCACAGGCGGTGGTGGCCGGGGTCGACGCGCTGTCGCACCGCGAGTACCA GGTGTTTCGCCTGCTCAGCATGGGGCACGCGGTGGGCGAAATTGGTGCGC AACTCAAATTGGCCTCCAACACGGTGAGCACTTATCGGGCACGGATTCTG GAAAAGACCGGCACCAAAAACGATGTGGAGCTGGCGCTGTACGCCCAGCG GCACAGCCGCAGCACGCCCTTGCGCTGA >Rfer_3543 transcriptional regulator, Crp/Fnr family ATGAGTTCCGATGTTTCTCTCCACCAGCGCCGCCGGCCGCTGACCGCGGC CGAACTCGACACGATTCCATGGCTGGACCGGCTCTCGCCTGCGGAGTACG AACGGGCGGTGGACGACCTGAAAATCAGCGATGCCGTCGCAGGCGAGTAC GTTTGCCGCACGGGTCGCCCGGTCACCTATTGGTTTGGCGTGGTGGACGG ATTGCTCAAGATGAGCAGCGACAACGCCGAGGGCCAGACCATGACCTTCA CCGGCGTGCCGCCCGGCGGCTGGTTTGGCGAAGGCACGGCGTTGAAGCGC GAAAGCTACCGCTACAACATCCAGGCCCTGCGCAAAAGCCGGGTGGCCGG GCTGAACGTGGACACCTTCCACTGGCTGCTGGACCACTCGATTGGCTTCA ACCGCTTTGTGATGAATCAGCTCAACGAGCGGCTTGGCCAGTTCATCGCC GCGCGCGAGATTGACCGCATGAACAACCCCGACATCCGGGTGGCACGCAG TCTGGCCGCGCTGTTCAACCCGGTGCTGTACCCCGGCGTCGGCGAGGTGC TGCGCATCACGCAGCAGGAGCTGGCCTACTTGGTGGGTCTGTCGCGCCAG CGCGTGAATGAAGCCCTGACAGCGCTGGCCGAGCAAGGCGTGATTCGCGT CGAATATGGCGGCCTGCGCGTGTTAAGTCTGGTCGCATTGCGCTCCCAGA TATTTTTATAA >Rfer_1647 putative transcriptional regulator, Crp/Fnr family TTGGATGCCGCGATCAACCGCAATCAAAACCACCTGCTGGCTGCCTTGCC GGCGGTCGAGTTCGGGCGCATTGCGCCGGAACTGGAGTTGGTTGCGATGT TGCAGGGCGAAGTTCTTTATGAATCCGGGCAAGCCCTGCAGTATGTCTAT TTCCCGACAAGCGCCATCGTGTCCCTGAACTGCGTGACCGAGAGCGGCGC AACGTCCGATATCGCTTGGGTGGGCTGTGAGGGCGTTATTGGCACTGCGC TTGTCATGGGCTGCCATGCCACCCCGACAGCGGCCGTCGTCTGTGTCGGC GGCTATGGCTACCGACTGAAGGAACAAATGCTGATGCAGGAACTCCGTCG CACCGGCGGGCGCCGTGCCGGGGTGATGCAGCACTTGTTGCTGCGCTACA CCCAGGCGCTGATGACGCAGCTATCCCAAACGGCGGTCTGCAATCGGCAT CATTCGGTGGAGCAGCAACTGTGTCGCTGGCTGCTGTCAACGCTCGACCG TTTGCCCTCCAATGAATTGACCATGACGCACGAACATATCGCCTGCATGC TCGGTGTGCGCCGTGAAGGCATCACCGAAGCCGCCGGGCATTTGCAGCAA GCGGGTCTCATTCGTTATTACCGCGGCCATATCACCGTGCTTGACCGCGC GGGCTTGGAGACCCACGTGTGTGAATGCTACGCGGTGGTCAAAAAGGAGC ATCAGCGTTTGCTGCACGACGTAGGCGAGCGAGCGGAACTTTTTCCCAGT CAGTCGCCGCAAATTTTTCACCTGGCGTCAGACTTTGCCTAG >Rfer_0906 response regulator receiver modulated CheB methylesterase GTGAGTCGTATCAAAGTGATGGTGGTGGACGACTCGGCCGTTGTGCGCCA GGTGGTGGCAGGCTTGCTCGCCGACGACCCCGCTATTGAAGTGATAGCCG CCGTGGCCGACCCCATTTTGGCCATCGCCCGCATGAAGGTGCAGTGGCCG GACGTGTTTGTGCTCGACATTGAGATGCCCCGCATGGACGGCATCACTTT TCTGAAGAAAATCATGGCCGAGCGGCCCACACCAGTGGTAATTTGCTCAA CCCTGACCGAAAAAGGCGCGCAGACCTCCATGGCAGCGCTCTCGGCAGGC GCGGTCGCCATCATCACCAAGCCCAAACTTGGACTGAAACAATTTTTGGT GGATGCGTCAGACGACCTGATTAGCGCTGTCAAGGCTGCCGCCCGCGCCA ATGTGAAAAGGCTGCAGGTGGTCGAAAAGCTGACGGCAGATGCCATCTTG CCGGCCAGTGACAGGCACGACGCCATGCTCCAGACCACCGAACGTGTTGT GGCTTTAGGCACTTCCACCGGCGGCACGCAGGCGCTGGAAGTTGTACTGA CGGCTTTGCCCCGCGTGACACCCGGCATTGTGATCGTGCAGCACATGCCG GAGAAATTTACCGCCGAGTTTGCCAATCGGCTCAATGGTCTGTGCCAGAT CACGGTGAGGGAAGCCAAAAACAACGACCGTGTAGTGCCAGGGCGCGCGC TGATCGCGCCCGGCGGCAAGCACATGCTGCTGCGACGCAACGGCGCGCAG TATTCGGTAGAAGTGTTGGACGGCCCGCTGGTGAACCGGCATCGGCCATC GGTCGATGTGCTGTTCCGCTCCGTGGCCAGATGCGCTGGCGCCAACGCTT TAGGCGTGATCATGACCGGTATGGGCGATGATGGCGCCGCCGGTCTGGCT GAAATGCGCAAAGCCGGTGCCCGCACGCTGGCGCAGGACGAAGAAAGCTG TGTCGTCTATGGCATGCCCAAAGAGGCAGTCAAGCGCGGCGGCGTCGAGC GCAGCGTGCCGCTGGGGGCCATTGCACGCGAGATCATGGCGCAGATGGCA GGATGA >Rfer_3345 two component, sigma54 specific, transcriptional regulator, Fis family ATGGCATCAAACACAACGCTGAGCAATGCCCGGATTCTGGTCGTCGATGA CGAGCCCGACTTGCGCACGCTGTACGAGTTGACACTGTTGCGCGAGGGTT ACAGGGTGGAAACAGCCGGCAACCTGGCTGAGGCCTTGCAGCATCTGGGC GAGCGCCGCTTTGACGTTGTGATTACCGACATGCGCCTGCCTGATGGTCT GGGCCTGGAACTGATCCAGCAACTGCGGGCGCAACAGCGCCCGGAGCGAT GCGTCGTCATCACAGCCTATGGCTCGGCAGAAAATGCCGTCGAGTCACTC AAGACGGGCGCGTTTGACTATCTGACCAAGCCGGTTGATCTCAAGCAGTT TCGATCCGTCATCGCCTCTGCCGTGCAAGACCCGGCTCCGCGGCCAACCG CGGTCGGTCGCGCCGGCTCGCCACTCCCTGAGAGCAGCGATGCCGTGTTG CAGCGGCTGGTGGGGGAATCAGACAGCATGAGGCGGGTCAAGGAGCGCAT CGTCAAGGTGGCACGCAGCATGGCACCCGTGTTGGTGCATGGCGAGTCCG GCACCGGCAAGGAACTGGTGGCGCGTGCCATTCATGCCAACAGTCACCGC ACCGGCAGCGCCTGGGTCGCGGTGAACTGCAGCGCGATTCCCGAGAGTCT GCTCGAAGCCGAATTTTTTGGCTCAAAGAAAGGCGCCTACACAGGATCAA CCCAGGACCGCGTTGGCTTCTTCCAGGCCGCAAGCGGTGGCACCTTGTTT CTCGATGAAATTGGCGACCTGCCCCTGTCGATGCAGTCAAAGTTGCTGCG GGCCATCCAGGAGCGTTGTATCCGCCCGATCGGGTCGTCCCAGGAAGAAC CGGTCGATGTCCGCATCATCAGCGCCACGCACAAAGACCTGAGTCTGGAA GTGTTGGCGGGCCGCTTTCGGCAGGATTTGTATTACCGTCTGGATGTCAT TGAAATTGAGATTGCACCATTGCGCGAACGCCGGGAAGACTTGCCTGCGC TGTGCCAGACCTTGCTGCGCCGGATCGCGTTTGAGGCGGGCATTCCGGTG CCGACACTCTCCAAAGCGGGACTTGAACAGCTCTCCCAAGACCCGCTGCC CGGCAACGTGCGCGAGCTGGAGAATCTGTTGCAGCGCGCCGTCGCCTTGA GTGACGGCGATGAACTCCAGCTTGAACTCACCGCTCGGCAGCCGCTGACC CAGGACGCCTCTTTTCTGGATAGCGGCCCGACACCGCTGGACGATGATCA AACCACCATCCCCAGCGACTTGCAAAGCCATCTCGACACTCAGGAACGCG ACATCCTGATTCAGGCTCTGCGTGAAACCGGCTTCAATCGCACCGCCGCA GCGGCCCGGCTCGGTTTGAGCCAGCGCCAAATGGGTTATCGCATTGCCAG ATTGAATATTGTTACCCCGCACAGCGGCGAATTGTCCGATGAGTCCCTTT AA >Rfer_3940 FHA domain containing protein ATGCCGAAAATGATCGTATCGATCGACGGTGTTGTCATCAAGGAAGTCCA ATTGACAAAGGACCGCACGACGCTGGGCCGGCGGCCGTACAACGACATCG TGATCGACAACCTGGCAGTCAGCGGCGAGCATGCGGTGGTGCAAATGACG GGTGGACAGGTTTATCTGGAAGACCTGAACAGCACCAATGGCACCTACGT GAACGGCAAGGCGATCAAGAAGCAGTTGCTCCAGGATGGTGACTCGGTCG AAGTCGGCAAATACAAGATCAAATTTGTCAGCGATGTGCTCGGCGAGAGT TATGAAAAGACCATGATGGTCAAAGCGGGTGCCAGCGGGTTGGCGCCATC CGCTGCACCGACGTCGTTGACGCCGCCCGCGAGCGCTGGTTTCGCGGCGC AAGCGAGTGCCGAGCCGCCGGGCGCCGCAATCAAGGTCTTGTCAGGGGCT GCGGCCGGCCGTGAAGTGCCCTTGACCAAAGTAGTCACCACGATCGGCAA GCCGGGTGTCGCCGTTGCCGCGATCACCCGACGCCAGCGTGGTTTTGTCG TGCATCACGTTGAAGGGGCGGGCAACCCGACCCTCAACGGGGCGCCCGTC GGGGCAGAGCAGGTGGCCTTGAAAAATGGCGATCTGATTGAGCTGGCCGG GACCCAAATGCAGTTTGTTCAGGCTTGA >Rfer_2263 periplasmic sensor hybrid histidine kinase ATGACGCCCACCCAAACGCTGACCAGAAGGTTGCTCTTTGCGATATTCCC ATGGTATTTGCTGGTGGCGCTGTGCATGGCCGTTGCACAGCTCGCCATTC AGCTCATCAGCGTCAACCGCGACATTCAAAGTGATTTGGCAACGTTAGGG CAGACGATTGCCCCCAGTGCAGCGGTTGCGGTATGGGAGCTCGATGGCCA GGGACTGCGCTCGCTAGCGCGGGGGATTCGACAAAATGCCATCGTCACGG GCGTTCAAATTACCGCGATCACAGGGGACCTCTCTGCTATCGATGGAGAG CTGCCAGAGGGCGATGGTGAGGCTACCCATTCGCCGGCAAGCGCATTCAA TCAGACCTCCGTACCGCTTAACTACACCTCTGCGCGCGGGGATACCCAGT TGATTGGGAGCCTCAAGATGTACTCCAGCCGCGACGTGGTCTGGACGCGC TCCAAATACAGTGTCATGGTGACCCTGGTCAACTCACTGGTGGTCACCAC CGCGCTGTGGCTTATTTTTTCGTGGGCGATCCGCTTTCGCCTGTCTGACG CCGTCACGCAAGTTGCCAGGGCTGTCAGGAACTGGCGATTCCAGCGCCGC AACCTGCTGGTTGAACCCATCAGCTACCCCTACCAGGACGAACTGGGCGA ACTCGTCAAAGCCTTCAACGAAAGCCGCATGCAGCTTTCCGACTCGATGC AGGATCTGGCCGAACTCAACCAAAACCTGGAAGCCATCGTCACTGTCCGC ACGCAAGAACTCCAGCAGGCAAAAGACGCTGCAGAAGAGGCCACCAGCGC CAAATCAGAATTCCTGGCCAATATGAGCCATGAAATCCGCACCCCCATGA ACGCAGTGCTGGGCATGCTTTACCTGCTACTCAAAACCGATTTGTCGCCG ACCCAGCACAACTACCTGGCCAAGGCGCAGGGGGCGGCGCATTCCTTGTT GGGCACCATCAACGACATCTTGGATATTTCCAAAATTGAAGCCGGCAAGA TTGACATTGAAAGCGTCGAGTTTGGACTGGACGCGGTGCTGGGCCAGCTC ACCGATGCCATCGGCTACCAGGCTGAACAAAAAGGCATCGAATTTCTCAT CCGTTACGACGGATCGATTCCACCGTTCCTGATCGGCGACCCCTTGCGAC TGGGGCAAGTGCTGCTCAATGTGTGTGGCAACGCGGTCAAATTCACAGAG CAGGGCCAGGTCGAGCTGGGTTTCCTCAGCACATCGCAGACCGAGGTCGG ACTAACGCTGCAAGTCTATGTGCGCGACAGCGGCATTGGCATTGCCCGAG AAGTCCAAAACACGCTGTTCAAAAAATTCACCCAGGCTGACCAGTCCACC ACCCGCCGCTTTGGTGGTACCGGGCTGGGCTTGGTCATCAGCAAAAGCCT GGTCGAACTGATGGGGGGACGCATCTGGATTGAAGACTCCCAACCTGGCA AAGGCACCACCATTTGTTTTACCGTGCAACTTCAACTATCCGAACACAGC CGGGCGCGTCAACTTGAATTGATAGAGCAGACGGGGCCGCTGCTCAAAGG CCTGCGCATGCTGGTGGTGGATGACAACGAAGCTTCGTGCGAAATCATGG CTCAAACGTTGCGCTACTTTCATGTGGATGCCAGCACGGCCAATAGCGGG CCTGCCGCGCTGACTATTTTGAAGAATGCAGCGGCCCACCCCTTTGATCT GGTGCTGATGGACTGGCGCATGCCCGGCATGAACGGCGACGAAGTCACCC GGCGCATCCGCGCAGAACCAGGCATTGCACACCAACCCAAAGTCGTGATG GTGAGCGCCTATGGTCACGAAGACGTCATCAAGCTGGCTGAACAGGCACG GGTGGACGGTTTCCTGACCAAGCCGGTATCGCCTTCCACCTTGCTGGACA CCGTCTTGTCCGTTCTTGGGCGCGGGCGCATTCTGGCTGGGGGCAACAAA CAACCAGCGTCTGCAGATACGCGAGGCAACAGCTCACTTTCCGGTGCGTG CCTGTTGCTGGTGGAAGACAACGACATCAATCGGGAATTCGCCACTGAAC TGCTGCGCGGCGAAGGTATCGAGATCATCGAAGCCGTCAACGGCCAGGAG GCGCTCGATAAGGTGCAGCAGCACGACCTGGATGCCGTGCTGATGGACCT GCAAATGCCGGTGATGGATGGGCTGCAAGCAACGCGCCGCATTCGCGCCT TGGCCAATACGCCTGAAGGCGCACGTTTTGCCAGCCTTCCCATCATTGCC ATGACGGCGCTGGCAATGCCTCAGGATGCGCAAAAGAGCCGCGAGGCTGG TATGAACGACCACATCAGCAAGCCAGTGGACCCGGAGCACCTGATGGCGA CGTTGGCAAAATGGATTCATTTGCCAGCAGACAGAACCAGCGCGCCCAAG CCCGCCATCTCCCATCCAGACCTGCCGCAGGACCTGCTGGGACTGTCCAG TCTGGACGCCGTTGAAGGCGTGCGGCGCATTGGTGGAAAGGCAGATGCCT ACCGCCGGCAGTTGCGTCGTTTCAGGGAGCACTATGCCGATGCGGTTGAC AAGTTGAGGCACTTGATCGCAACGCAAGACGCTCACCAGGCTGGGGATTA TTGCCATCTACTCAAAGGTGTCACCGGCAACATCGGGGCGCAGGCCCTGT ACCTGCAAGTAGCCCTGATTGATGCGCAGATCAAAAAAGACCATACACCC GCCAACGCAGAACTGGAGGCCATGCAAGTCTTGCTGCAGCAGGTGCTTCA GGACATTGACAGACTGGGTGCCAGCACCAAGCCCCCCGAAGCATCGGCCA CGTTGCTGGATGGAAACCAACTGCGTGGGCACCTGGAAGGGCTCAAGCAG GCCCTGAGCTACGATTTGGGCAGCGCCGAAAAGATACTGGGCCAATTGTT CAGAGGTGTCAGCGGCACACCGCTGCAGGCGGACATTGCGGTGATTGCCG GCAAAGTGGAACTGTTTGAGCTTGACGCTGCGCAGTTGCTGCTCAAACAA TTGCAAAACCGCATGAAGATCACCACCTGA >Rfer_0627 metal dependent phosphohydrolase ATGAACACTTTTCAAAAGCGCACCGCCATTCGCATCGCCGCGGTCAGTAT TTTGCTGGCGTCTTTGGCCAGCCCGATTGCCTGGTACGTGGCGCGCGAGA GTGCCGAGGAAAGCATTGTGGCGTTGGCCGTTGAGGAGTCAGGGCGTCTG CTGCACCAATTTGACGCCATCGACTTGAGCGGCCCGCAGGCCACCCAACA CGCAACCTTGGCAGCGAACGCCATTTCGGGCGGCATGTTTGACATTGTCG AGATTTATGACGCGCAAGGACGCAAGCTGGCTGAATCGGTCACGCCGGAG GGCCACGCGGTGGAGTCGTCACTGCCGCACCATGGCACGCCCGATTACAC GACGGCTTTTTACAACGGCCACAAGCCTGCGTCGGGGGTCTGGGCCTTGC GCGTGTTTGTGCCACTGCGTGACTCCGCCACCGACATGAGCCGCCCCATC ACGGGCTATTTCGAGGGCGTGCGCGTCATGCCGACCTGGCAGCAGGACCA GATCTTCAATAACTCGCTGAGCGCCGCGTTGATGGTCGGCCTGGCTTCTT TGCTGTGTGGCGGCGCGCTTTACCCGGTGGTGGTGCACTTGTCAGCGGAT AACGAGCGAAAAGCGCAGGAGGTGCTGGACTCGCATATTTCCATGATGGA AGCGCTTGGGCGCGCCATCGCCAAGCGCGACTCCGACACCGGCGCCCACA ACTACCGCGTGGCCTGGATTGCCGCCAGCATTGCCGAACAGATGGGTCTG GCGGGCAGCGACATGCAGGCACTGATTGCGGGCAGCTTTTTGCACGATGT GGGCAAAATTGGCATTCCGGACGCCATTTTGCTCAAGCCCGGCAAGCTCG ATGACGACGAGATGCGCGTCATGCGCACCCACGTCGCGCAAGGGGAGGAG ATCGTGAACGGCATGGGCTGGCTTGAAGGTGCCAATGCCGTGGTCGCCGC GCACCACGAAAAATGGAATGGCTCGGGCTACCCGCGCCAGCTCAGCGGCG AGGACATACCCCTGGCGGCGCGAATTTTTGCGGTGGCCGACGTGTTTGAC GCGCTCTGTTCGAAGCGCCCATACAAGGAGCCGATGGGCTTTGACGCCGC CATGGTCATTCTTGAGAAGGACACCGCCAGCCATTTCGATCCGTCGGTGA TGGCCGTGTTTCGCCCGATGGCGCGAGCGACCTTTGACCGCTTGGCCGGC ATCAGCGAGAACGCCACCCGGCAACTGCTGGAAGACCGCGTGCGCCACCA TTTTGAAATGTGA >Rfer_0916 UspA ATGTACCAACGTATTCTTGTCCCTATCGACGGCAGCGCCACGTCCACCCT AGGACTTGACGAGGCTATCAAGCTGGCCAAGCTCACAGGTGCAAGCCTGC GCCTCATTCACGTCTCGGACGCATTGACGTTCGCCACAGGCTTCGAAACC TATGCGGCCTATGCCGCCGATGTGATTCCGCGATTGAAAGAGGCCGGCGA ACAAATTCTCGAGCAGGGCAGAATCCGTGTCGCGGCCAGCGGCGTCAAGG TTGACACATTGCTCTTGGACGGCATGGTGACCCGGGTGTCAGATCTCGTC GTCGATCAGGCGAAGGCATGGGACGCCGACCTCATCGTCATCGGTACCCA TGGCCGCCGCGGTGTGGGACGCTGGTTACTGGGCAGTGACGCGGAGCAGA TTGTTCGCATGGCACCTGTGCCGGTGCTGCTGGTTAGGGCGCTAGAAGTT GAAGGTAACGCCGGCGCGACGGTGCGGGCAGGCGAAGCCGCCCGGGCTTC GAATCGCGCCGCACCGACTTGA >Rfer_4028 diguanylate cyclase ATGCGGATCAACCTGCTCTTCAGCTTGCGCGGCAAGCTCACTGCGATGCT GCTGCTTGCCAGCTTGACGGCGGCATTGGCGGTGGGCGGAACGGCTTATT GGCTGTTGATGCAAGACTTCAACGCAACGGCACGCGAGACCGCCTTCACC AATTTCCAGACTGATATTCAGGCGTATATCGGCACGTATGGTTCATGGGA AAACGCGCGTCGCAATCAGGTTTTTCACGAGTTTGTGATGCAGCGTCGAG GACCCTCCGGCAGCCTCAACCCCCTGCCAGGTGCTGGCGGCAGGCCTGCC TTGCCGGGAGAAACAGACGCTGGTGAAACACGTCGACAAGGCGCACCCGC GGGCGCTGTCCATCATCGTGACCCGCCTTTTCATTTCATGCTGATTGATA CGCAAGGTCATGTGCTGCTTGGGGGCGATGGTCGTCAAGATACTGCGGTG GGCGAGGATCTTCGCCGTCACGCGCGCCCGATCAGTGTGAACGGCAAGGT CGACGTGCTGGCCGTTCCTGTCGGATCGCCGCAACTGAGCACACAGGACA AAGCTTACCTTGGCGCCATGCGCGAGGCGTTGCAGAATGGCTTGCTGGCG GCTTGCGCGCTGACCGTTGTCATGGGGCTTGTGTTCGGTTCGCGCTTCGG TGCGCGGGTGCGCGAATTGACGTCCGCCATTCAATCCATGCGGGCAGACG GCGAAATACTGCAACAAGTGCCGGTGCACAGCCGCGACGAGATGGGGCTG CTGGCATCGGCGTTCAATCGCATGAGCCGCGAGTTGTCCCAGGCGCATTC GGCGTTGCGCAGGACCAACGAGCAGGTGCAGTCGCAGGCTGCGCAGTTGA AAGAGCTTAGCGTGCGCGATCCGCTCACGCAGATGTTCAACCGGCGTTAC TTCGACGAGCAGTCTGCGCTGCTGTATCAACAGGCGATGCGCCATGGCTG GTCGGTCAGTGTCATGGTGGGCGATCTGGACTATTTCAAATCGATCAACG ATGACTTTTCTCACGCCATTGGCGACGAGGTGTTGCGCCGCGTGGCCCTG ATCTTGCGCAAGAATACCCGCAGCACCGATATTGTTGCGCGTTACGGCGG CGAGGAGTTTGTGATCGCATTTCCCGAAAGCACGGTGCAACAAGCTGCCA TTCGTTGCGAAGCATTGCGGGCCGCCATCGAGCAACATACATGGCAAGAG GTGCACCCGGAATTGCGCGTGACGATGAGCATGGGCTTGTGCGACGACAC CAAGCGCGGTTCGATCGAAAAGATGCTGGCCGCTGCGGACGAGGGTCTGT ACGAAGCCAAACGCAGCGGCCGCAACCGGGTGGTTAGCTGTTGA >Rfer_3326 transcriptional regulator, Crp/Fnr family ATGGAAGAACCAATCCTTACCATCGATGAACGTGCAGCGATCAATTCAGG TCGCTGGTTTTCAACCCTGTCGCCTTCTTTGCGACACGATATTCTGCGAT GCGCTTACGTCAAACGATACAAGGACGGCGAACTCATCACTGCCCGCGGC GAGCCGCCGGAAGAATGGATTGCCTGCGCGCGCGGTGCCGTGCGGGTCAG CTCCACATCCATCTCGGGCAAGCAGATCACGCTGACCTATGTGGAGCCGG GCATCTGGTTCGGCGATGTGGCCATCTTCGACGGCGACCGACGCACCCAC GATGCCTACGCTCACGGCGAGACGACCATCTTGTGTGTCGCCAAGGCCGA TTTCAAAAAGATTCTGGCGCACCATGCCGAGCTCTACGAAGCGCTGCTGC GCCTGCACGCCCGTCGCATCCGCCAGTTGTACGGTCTGGTGGAAGACCTC AACACCCTGCCGCTGCGGGCACGACTGGCCAAGCAGTTGCTGCACCTGGT GCGCAGCTACGGCGTGCCCTCGCTCAGCGATGGGCGCGAAATGCGCATCG GCCTGCAATTGGCACAGGAAGAACTGGCGCAATTGCTGGGTGCCTCCCGC CAACGCGTCAATCAGGAACTCAAGTCGATGGAGCGAGAGGAAACCATCCG GATCGAACCGGGTGGTCTGGTCATTCGCAACCGCGACGCCTTGATGCTGA TCGCAGACGCCGATAACTGA >Rfer_1982 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGACCATGAATCCCGTCACCAGGACGCCCGATGATCTGGCGGGTACCTC ACTGATCCGTGCTGCCGGGCGGCTGGTGCTCGTCTATGCTGTCTTTGCCG GCTTGTGGATTTGGCTCTCGGATGAATTGCTGGCGTGGCTGGTCAGCGAT CCGGCCGAAATCGTCCAGGCCAGCATCTTTAAAGGCTGGCTGTTTGTGGT CGCCACGTCCCTGTTGCTTTATGGCTTGCTACGGCGACTGCTGAGGCAGA GCCTAGTTGCCTCGATGCGCGAGCAAGAAGCGCAAGCCGAAAATCATCGC AGCCAGCAGTTGCTGACGGCTCTGATTGACAGTTCAACGGACGCCATTTT CGCCAAAGACCTGGCCGGACGCTACTTATTGTTCAACCACGAAACCACGC GCGTCATGGGCACCACACCTGAGCGGGCGCTGGGCCATGATGACACGGCA CTGTTCCCGCCTGAGCAAGCCGAGTTGATCCGCGCCAACGATCAGCGCGT ACTCGCGTTGAACCGGACCACCAGCTACGAGGAGACACTGGAAACGGTCG ATGGCGAGCGCGTTTTTCTTGCCACCAAGGGGCCCCTGCGCGACAGCAAT GGACAAGTCATTGGCCTGTTTGGCATCTCGCGCGACATCACCGACCGAAA AAGAGACGAAACCAGACTCACCCTGGAAGCGCGCCGCGCCGAGGCGCTGT TGACGCTGCCTGGCGCAGCCGAAATCATGACTGAGAGCGCCTTCATGCAG CACGGGCAAGAGTTGGCCGAGCAGCTCACCGGCAGCCAGATCGCCTTCAT TCATCTGGTGCACGATGACCAGGAAACGATTGAACTGGTGAACTGGTCGC GCAGCACGCTGGCGCAGTACTGCACCAGCGCTTTTGACAGGCACTACCCC GTCAGCCAGGCCCGCATCTGGGCCGATGCACTGCGCCTGCGCACGTCGGT GGTCATCAATGACTACGCCAGCGTGATGGGCAAACATGGCCTGCCTGAAG GCCATGCGCAGCTCGACCGCCTGATCAACGTGCCGGTCATCGACGGCGGC CTGGTGCGCATGATGGCCGGCGTCGGCAACAAGCCCGAGCCCTACACCGA GGCCGACGTGGAAACAGTGCGCCTGATCGCCGACGCCGTCTGGCGCATCG TGCGTCAACGCCGGGCCGAGACAGCGCTGCACGAAAGCGAACAGCGGCAT CGTCTGCTCGCCGACAACGCCAGTGATGTCATCTGGACCATGGACCTGAA AGGCCGCTTTACCTACGTCAGTCCTTCGGTCGAAAAGCTTCGCGGTTTCA CCAGTGCGGAGGTGATGCAGCAAACCCTGGCGCAAACTCTGTGCCCCTCA TCGATCCCGGTAGCGACCGAGGCGCTGGGCAAGTCCATGGCTTCCATGGC GGCCGGTTTGCCCTTCATCGGATTCAGGGGCGAGCTGGAACAACCTTGCA AAGACGGATCAACGGTCTGGACCGAGATTTCCACCAATGGCATGCGCAAT GAGCAAGGTGACTTTGTCGGTATCGTCGGCGTCAGCCGCAACATCACCGA GCGCAAAGCCCAGCAACAACAGCTTCAACTCGCGGCGCAGGTGTTTGCAC AGGGGCGCGAAGGTATCACTGTCACCGATGCTCGGGGCCACATCATCATG GTCAACCGGGCCTTTAGCGAGATCACCGGCTATACGCAAGCCGAGGTGCT GGGGCAAAACCCGCGCATCCTGAAATCCGAGCGACAAAGCCCGGAGTTTT ACCTCGACATGTGGACTGCGCTCACCACGTCGGGCCATTGGGCTGGCGAA ATGTGGAATCGGAAAAAAGACGGTACGGTGTACCCGGAGTGGATGGCCAT CTCGGCGCTGCGTGACAGCCAGGGCCTAACCACGCACTATGTCGCGAGCT TTAGCGACTTGAGCACCGCCAAGGCCGCTGAAAGCCGCATCCAGTGGCTG TCGCAATTCGACACCCTCACCGGCCTGCCCAACCGCACCCTGCTGCAGGA CCGCACGGCGCTGGCCCTCAGCATGGTGCAGCGCGCGCGGGAGCCGCTGA CCATGCTGCTGGTCGCCATCGATCATTTTGGCGCCGTCAATGACACCCTG GGGCATCAGCTTGGCGACGAGCTATTGGTCGAAATGGCCAGACGCCTGAG CGATTCAGTGCGCGAGCAAGATACCGTGTCCCGTATGGGTGGCAAAGAAT TTGTGCTGGTCTTGCCTGGCACGCCGGCCATGGGAGCCGCACACCTGGCC ACTGAACTGCTCTGGAAACTGTCCCGGCCCTGCTCACTGGGCATGCACGA ACTGACCCTGACCGCATCGATCGGCATTGCCAGCTTCCCGGACAACGGGG CTGACTTTGACACGCTGTTCAAAGCGGTTGAAATCGCCATGCATCGTGCG CAGCTCAAAGGGCGCGACACCTATCAGTTCTACAGCGACGACATGTATGA GCAAGTGCTGGCGCACGACCGCCTGATAAAAGCCTTGCGCCAGGCGATCG TTCTGGATCAACTGCAACTGGTGTACCAGCCCCAGGTGGACTTGCAAACC GGGCAAATCTGCGGTGTCGAGGCGCTGTTGCGCTGGCAGCACCCCGAGCT GGGCGCCGTATCGCCGGGGCAGTTCATTCCCCTGGCCGAGGAATCGGGCC TCATCATCGGCATCGGTGAGTGGGTGTTGCGACGTGCCTGCCAGGACATT CGCCGCTGGCTTGATCACGGCATCAAAGTCCCGCATGTGGCGATCAATGC GTCGCCCTTGCAATTTCGCGACAACAATTTGGTGCTTCAGGTCAAAGCCG CCCTGACCGAATCGCAGATTGACCCGGCGCTGATTTATATCGAGGTCACC GAGAGTGCACTGATGGATGACGTGCCACGCAACGAAGCCATGCTCAAGGC GCTAAAAGACCTGGGCATCAAGCTCTCGCTGGACGACTTCGGCACCGGTT ACTCGTCGCTGAGCTACCTCAAGCGCTTTCCATTCGACCAGGTCAAGATC GACCAATCTTTTGTACGGGACATTGCCACCAGCCAGAGCGACAGCCTGCT GGTGAAGGTGATTGTGTCCATGGCCCATGGCTTGGGCATGAAGGTCATTG CCGAAGGGGTGGAAACCGAAGCCCAGTGCGAGATCATGCGCACCAGCATC TGTGACGAAATTCAGGGCTATTTCTTTTGCAAGCCTATCTCAGCCCAGGC GATTGAAGAACTGTTTTCTGAAGGTCGCCAGTTGCCAGCGCATCTGCTGC GCCTGCAAAAGCCGCAGCGCACGCTGCTGCTGGTGGACGACGAGCCCAAC ATCCTGGCCTCGCTCAAGCGCCTGTTCAGGCGCGATGGCCATCTGATCCT GACCGCCAACAGTGGCGCTGAGGGGCTGGAGCTGTTGTCCCGGCAAAAGG TCGATCTGATCATCTCGGATCAGCGCATGCCGGGCATGACCGGGGTGGAG TTCCTGCGCGCCGCCAAAGCCCTGTACCCTGACACGATTCGCATCGTGCT GTCAGGCTACACCGAGTTGCAGTCCGTGACGGATGCCATCAATGAAGGCG CCGTCTACCGCTTCTTGACCAAGCCGTGGGAGGATGAGCCACTGCGCGAG CACATCAACAAGGCCTTTGAATACAAGGAGTTGCTGGAGGAAAACCGCCA GCTCGACGTCAAGATTCGCACCACCAACCAGGAGTTGATTGCCGCCAATC GGCAACTCGGCGACATCCTGCAAAACAAGCGCCACCAGATCGAGCGCGAC GAAACCAGTCTGGCGATTGCGCGTGAAGCCTTGCAGCACATGCCGCTGCC CGTGATTGGGGTGGATGACGAAGGCTTGATTGCGTTTGCAAATGTGGCTG CCGAACACCGGTTCGCCGACGCCGGCGCCTTGCTCGGCATTGAACTGGCT CGGGCGCTACCCGCCGTCGATGCAGCCATCGCCGCTGCCGTTGAAGGGAC GCCCTGCGAGCTGCTGATTGACGACACCCGCTACCTGGTCAAGTGGAACC CCATGGGCATCAACTCGCGCTCCAGAGGAAAAATAGTCACCTTGATTCAT ACCGGGCCTGCCGCATGA >Rfer_0246 histidine kinase ATGGCATTGGTGGCTTACGTAGGAGCAGGTGATCTCATCCTGTCGCAAGA GCGCTCGAATCTGTTGCTCTACTTCTCAGAAATGGAGCGTATCTATACAA CGGAAAGCGCGCTCGGAAAGACTACTTATGCCGTCTCCCATTCCATGCTC AAGTTAGAGGAAAGGTTCTTTTCCAATGACAGCCTGCCCCCAGCGTTTGA AGAGCATATTGCGCTCGATGTGGAACTGATCCAGGCGGGTCTGATGGGAT TGCAGGACTATTACCCGTGGCTTAAAAAGAGGAATGATCGCCTGGACCAG GATATGGCCAGACTGCGTACCGAACCCTCGCATGGCAGCATGGTCTCGCT GCGAGAGCACGGAAAGGAACTAAGCAGTGAACTGGACCAGATTACCAGGG AATTGCGTGAGCGCAAGAGCCTGCTGTGGCAACGCTACCGCAACGAGTAT GACATCATGTCGTTCACTGCGGCAGTTATGACTCTCGTAGGCGCGCTAAT TTTCGGCGCACTGATTGCGCTGTTTCTCACGCGACTGGCATCCGATATCA GGAGGCTTGCAACGCGTGCGTTGGATATTGTGGTCGGCTATCGGGGACCC CCGGTAGAGGTCACGCGTGACGACGAGGTAGGCGATTTGATGAAGGCGAT CAACCGCATGCAATCCGAATTACGACTGCGCGAGCGGCAGCTGGAAATTT CGCGCGAACAGCGCTTTCACAAGGAAAAGATGGCGGCCATCGGCTCGCTA GCCGCAGCCGTTGCGCACGAGATCAACAACCCGATTGCAGCGATAGCGGG AATCGCCCAATCGCTGAAAGACTCCGGCCGACACGCGTCGTGTGCAGAGT TCGGTATCGATCCATCCGACCTGATACTGGAACAGGCCAAACGCATCACT GCCATTTCGCGACAGATCGCCGAGCTCACCGCACCGCACTCACCAGAGCA CGAGTTGCTCGATCTGAATTCGCTGGTGCGCAATACATGCAATTTCATTG CTTACGACAAGCGCTTTGACAAGATAGAAATGGCTCTTAATCTTGATTCC CAGATACCCGCAATCAACGCCATCGCCGATCATCTGACGCAAGTGCTGAT GAACTTATTGATCAATGCGGCTGACGCGCTGGAGGATGTCCATCAGCGCA GTCCGACGATATGGGTGGCGACGTTGGCGACAAAAAGTGAGCTGCTATTG ACGGTAAGCGACAACGGCAAGGGGATGGACAGTTCCGTGCTGGCGCACGC ATTCGATGAAGCCTATACGACGAAGCCGCCCAACAAGGGCCGCGGCCTTG GCCTGTTTTTGTGCAAGTCCCTGCTCGAGAGCTGCGGCAATCGCATCGAG CTAGAATCGACGCTCGGGGTTGGCACTTCAGTGCGAGTCCGTCTCACGCT GGCGTCGCATCCCGGAGCCTAA >Rfer_2854 two component, sigma54 specific, transcriptional regulator, Fis family ATGCTGCCTAAAATATTGGTCGTTGACGACGACCGCTACACCCGCACGCT GATTGAGCAACTGATGCGCAAGAGCGCTGAAGTGCATCTGGCCGAGAGCG GCGAGCTTGCGCGGGAATTATTTGCCGCGATTGACTTCAATCTGGTGCTG ATGGATCAGCGCCTGCCCCAAGTCAAAGGGCTCGACCTGCTGCGCGAATT CCGCTTGCAACGTCCCAAACTGGTGGCCATTCTGATCACGGGCCATGCTG ACGTGCGCGACGCGGTGGCCGCCGTGCGCGAAGGTTTGTTTGACTACCTG ACCAAGCCGTTCGAGGATCTGGAGGCGCTGGAAGCGGTGATCGGCAAGGC GCTTGAGCTCGATCGCGCCTACCGGGAAATTGACAGCTTGCGCACCCGCC TGGCTGTTGAATCGGGTGCGCCCGACATCATCGGCCAGTCGCCGCCCATG GAGCGGCTGCTGGGTCAGGTTCGTGAGGTTGCCGCACTGGACACCACCGT GCTGCTCGAAGGTGAAAGCGGCACCGGCAAGGACGTTATCGCCAAACTGA TCCACGCCTGGAGTCTGCGTTCCTCCAAGCCCTATCTCGAAGTCAACTGC GGCGGCCTGCCGGAGTCCTTGTTGGAAAGCCTGCTCTTTGGCTATGAAAA AGGCGCCTTTACCGGCGCGGCCCAGGCCAATCCCGGTTACTTCGAGAAAG CGCATGGTGGCAATCTGTTCCTCGACGAGATTGCTGACATGAGCCCCAAA TTGCAGAGCAGCCTGTTGCGCGTGCTGCAGGACCGCAGCTTCTGCCGCAT CGGCAGCACCAACCCGCGCAAGACGGATTTTCGCCTGATCTGCGCCACCA ATCGTCCGCTCGCCGGCGAGGTCAAGGCAGGACGCTTCCGCGAGGATCTC TACTACCGCATCAACGTGGTCGCGCTCAACCTGCCGCCGCTGCGTGAGCG TGGCGACGACATCGTCCGCCTGGCGGTGCACTTTCTGGATCGCTACAACA CCAAGTTTGGCAAGGATTGCGGCCCCTTCACACCGGCAGCAGTCCGCGCT TTGGAGGCCTGCCGCTGGCCCGGCAACGTGCGCGAATTGCAGCATTGCAT TGAACGTGTCGTTGCGCTTCAACCCGGCGGCGTCATTGACGCGAGTCACC TCAGTCCGACCTGCGATTTCCTGCCCGAGCTTGACCCGCAGGACAAGACC ACAGCCTTGCCAACACTCGCTTACCAGGAGGCACGGACCGAGTTTGAGCG CGACTATATGCGGCGTCTGCTTGAAGCGGCCGGCGGCAATATGTCGGAGG CGGCCCGTTGCAGCGGCATTCCGCGCCAGAATCTTTATGTGCGGATGAAA CGCTGGGGTTTTGTCATTGATTAG >Rfer_2528 histone deacetylase superfamily ATGACCGGCTATTACACCCATCCCGATTGCCGCAAACATGAAATGGGGCC GGGCCACCCCGAGTGCCCGGAGCGGCTTGATGCCATCGAAGACCGGCTGT TGATCACCGGCCTGGGGCTGGCGCTGGAGCGGCGCGAGGCGCCTGCGGCG TCGCTGACCGACATCGAGCTGGCGCACAGCCGCACGCATGTGGCGGCACT GCGCGGCTTGAGCGATGTGCTGAAAGAAGACATTCTGGCCGGTGGCCCGC CCTATGCCCAGGTGGACCCCGACACCTCCATCAACGTCTACACCTGGGAC GCCGCCCTGCACGCGGCCGGCGCGGCCTTGGCCGCTACCGACGCGGTGAT TGCGGGCGACTTTGAAAACGCGTTTTGCGCCATTCGCCCGCCCGGCCACC ATGCTTGCCGCGACCAGGCCATGGGCTTCTGCTTTTTCAACAACGTGGCG CTGGCCGCCAAGTACGCGCTCGAGCGCCATGGCTTGAAGCGGGTCGCCAT TGTTGATTTTGATGTGCACCACGGCAACGGCACCGAAGACATCGTGGCGG GCGACAAGCGTATTTTGATGGTGAGCTTTTACCAGTATCCGTTTTATCCG CTCGATCACGTTCACTCCAGTGCTGCCAACCTGGTCAATCTGCCGGTACC GGCCTACACCAAGGGCATGGAGATCAGGGAGCTGATCGAAAGCGCCTGGA TGCCGCGGCTGGAGGCTTTCCGGCCCGAGATGATTTTCATCAGCGCCGGC TTCGACTCGCACCGGGAGGACGACATGGGCCAGTTGGGCCTGGTCGAGCA GGACTACATCTGGATCACGCATCGCATCAAAGACGTGGCGCGGCGCCACG GCAAGGGACGCATTGTGTCGTGTCTGGAAGGTGGCTATTCCTTGAGCGCG CTCGGTCGCAGTGTGGAGGGACATATTCGGGTGCTGGCCGATGTTTGA >Rfer_0423 heavy metal sensor signal transduction histidine kinase TTGATTGGCAGAACATCCATCACCCGACGTCTGGCGCTGCTGTTTGTGAC CGCTTCGTCGGCGGTCTTGCTGGCGCTGGGCTTTGTCATCGCCACCTCGG TGGAGAAACACTTCGAGCAACAGGACATGGAAGTTCTGAGCGGCAAGATG GAGTTGGCCCGCCATGCACTCAAGACATTCAAGTCGCAGGACGACCTGGA TCGCATTTCGCAATTGCTGGACAACTCGCTGGTGGGACACCATGGGCTTG AACTCATCGTCTTCGGCCCCAATCACGCGCTGCTTTACGCCACACCAAAC GCCAATTTCCCGTTCGACATGATGGCCGCCCGTGCGGCCCAGAGTCCGCA TCGCCCCATGACCTGGCTACTGGGCGACCAGACTTATCGCGGTATCGCTG CTGAATTGCCAACCGGCATCAGCGAACGCTCGCGGGTCGTCGTGGCGGTC GCCCTCGACATCGCCCATCATCAGGCATTCATGCGCTCTTTCCAGCAGAC ACTGTGGTTTTTTGTCGCCGGCGCTGCGCTTCTGACGGGCCTGCTGGGCT GGCTAATTGCCCGGCGCGGCCTGGCGCCACTGCGCGCCATGCGCGAACAG GCACAAGTGGTCACAGCCCAACAACTCAGTCATCGATTGCAGGTGGAGAC CGTGCCGGTTGAGCTGGCCGAACTGGCACAGTCCTTGAACGATATGCTGG CGCGGCTGGAGGATGCCTTCCATCGGATTTCCGATTTTTCTTCGGACATT GCGCACGAGTTGCGCACCCCGGTGAGCAACCTGATGACGCAAACCCAGGT TGTCTTGTCACGGGCACGCGACGCAGACGAGTACCGCAGCATTCTTGAAT CCAACGCCGAGGAGTTTGAGCGCATGGCCCGCATGATCTCGGACATGCTG CTGCTGGCCAAGGCCGACAACGGTCTGGTGGTGCCCAGCCGGGAAACACT CCATGTGGCCGCAGAGGTCTTGGCATTGTTTGACTATTACGATGCGGGGG CCGAAGAAAGGGGGCTGGGGCTCTCGGTCGAAGGCGATGGCGAGGTGAGC GCAGACCGGTTGATGTTGCGCCGCGCACTGGGCAACCTGCTGTCCAACGC AGTGCGGCATTCGACCGCCCACACCACGGTGCGCGTTCGTGTTCATACCG ATCAGGACGCGGTCTCGATTGGCATGGAAAACACGGGCGACGGCATTGCG CAAGAGCATCTGGAGCGTGTTTTCGACCGCTTCTTCCGGGTCGATCCCTC GCGACAGCGCAGCACTGAAGGCACCGGCCTGGGCCTGGCCATCACCAAGT CAATCGTCGTCGCCCATGGCGGCACGATCACTGTCGCCTCCATCGGCAAA GTGACCACGTTCACGATCAGACTGCCGCGCGTACCCTGA >Rfer_3684 periplasmic sensor signal transduction histidine kinase ATGGCGCCGCTCTCCCATCTCTCCATTCGCGCGCGCCTGGTGTGGGGTGC CGCCCTGGTGCTGCTGGCCTTTCTGGCCGGGGCTGGCTGGGCGGTGCAAC AAGCGCATGCCGACAGCGTGCGCGCCGCCCGCTTTGCCCGCCTGCAAGCC ACCATTTATCTGCTGATGGCCGGCGCCGAACTCAATGCCCAGGGCGCATT GCTGATGCCCGCCGCGCTGGCCGAGCCGCGTCTGTCGGTGCCCGCATCGG GCTTGTACGCCAACATTGCCAATGCGGATCGGGGGGAAGAATGGCAATCG GCGTCGACCCTGGGACTCAATCCGCCGTTTCAGCGCCAGTTGGCCACGGG TGAGTGGCGCTTTGAGACGCTGGTGGCGCCGCCGGCGCAGCGTGGCGACC AGGCAGAAGCCGCCGCGGCGTTTCTGGCTGCCACTTACGCAGTCAAGTGG TCCGATAAGGCGCACACGGCGACACTGGTATTTTCGGTGCTGGAAGACAA AGCGGTGCTGGATCGCGAGTTGGCGGCCTTCAAGGGCACGCTGTGGCGCT GGCTCGGGGGCACCGGGTTATTGCTGTTGTTCACCCAGACCCTGCTGCTG CGCTGGGGGCTGGCGCCGCTGGCGCGCATGACGCGGGAAATCCAGCATAT TGAGCGTGGCGAACAGACCAGGGTGCAGGGGAGCTACCCGCGTGAGCTGG CCGGCCTGACCCACAACCTCAACACCTTGATCGATCAGGAACGGGCGCGG CAAACACGCTACAAGCATGCGCTCGATGACCTGGCGCACAGCCTGAAGAC GCCGCTGGCGGTGTTGCGCGCTGCCTTGCCGGAGCCCAGCCAGTTGCCCA AGCTGGTGGCAGAGCAGGTGAGCCGCATGGACGACATCGTTGGGCACCAG TTGGGGCGAGCCGGCGCCAGTGGTGCCGCGCGCTTCGCGCCACAGCTGGC ACTGGCGCCGATTCTGCAGCGGGTTTGCGACTCGCTGGCCAAGGTCTATC TGGACAAGCAGCTGGTTTTTAACGTCGACTGTCCGCCTGAATTGACTTGG CGCATCGATGAAGGCGACGCCTTCGAGATGCTGGGCAATGTGCTGGACAA CGCGGCCAAGTGGGCCCGTCACTCGGTGTCGGTACGGCTCTGGCTGCAGG CCGGGCGCCTGTGCCTTCGCGTGATCGATGATGGCCCCGGTTTTGGTGAC CGACAAGCGGTGCTGCAGCGGCGCGTGCGGCTTGACGAACAGGTGCCGGG CCACGGCATTGGCCTTGCGGTGGTCAGCGATCTGGTGGCCAGCCATCAAG GCGAATTAACGCTGTCGCGGGCGCAGGCGGGGGGCGCCCAGCTGGACATC GTGTTGCCCGCCGCGTGA >Rfer_2210 two component transcriptional regulator, LuxR family ATGAGTTTGATACCAAAAAAGGGCACGGTTTACGTGGTGGACGACGACGA AGCGGTACGTGACTCGCTTCAATGGCTACTCGAAGGCAAAGACTACCGGG TCCGCTGTTTTGAATCCGGCGAGTCATTTTTAAGCCGTTACGACGCCCGC GAGGTGGCCTGTTTGATCGTGGACATCCGCATGGGTGGCATGACCGGACT GGAACTGCAAAGTCGTTTGCTGGAGAGCCACTCGCCACTTCCCATTGTCT TCATCACCGGCCACGGTGACGTGCCGATGGCGGTAGACACCATGAAAAAA GGTGCGATGGACTTTATCCAGAAGCCATTCAAGGAAGATCAACTGGTCAC ACTGGTCGAGCGCATGCTGGAGCAGGCCAAAGACACTTTTGCCGACCATC AGAGCGCGGCCAGCCGGGACGCCCTGATGGCACGTCTGACGCTGCGCGAA GCACAGGTGCTGGAACGCATCGTGGCCGGGCGCCTGAACAAGCAGATTGC CGACGACCTGGGCATCAGCATCAAAACGGTGGAGGCGCACCGCGCCAACA TCATGGAAAAGCTCAACGCCAATACGGTCGCCGACTTGCTGAAAATTGCT TTGGGACAAACCCCCGCAAAAGCTTAG >Rfer_1983 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) ATGGATTTGAATATCTTTCAGTCACACTCGCTCAAGGCCCGCGTGACCCT CTTTTCGCTGACAATTTTTGTGCTCAGTATCTGGGCGCTGGCGCTGTTTG CCAGTCGCATGTTGCGCGCGGACATGCAGCAGCAATTGGGGGACCAGCAA CTGGCGAGCGTGACTGGGGTGGCGGCAGGGATCAGTCACAAATTGGAAGA ACGTTTGGTAGCACTGGATCAGGTGGCCGAACGCATGGATCCGGCCCTGC TGCGTCATGACGCCGCACTGCAAGAATTCCTGGAGGCACAGCCGGTTTTT CGCGGTCTATTCAATGCCGGCGTCATCGTCACCACGCTGGACGGCACGGT CAGCCACGCGGTGCCGTTCGCCAAGGAACGGATCGGCGTTACTACCCTGG CGATCGGGGCGATTGCCGCCGCGCTGCGGCAGGGGCGCACAACGGTCGGT CAGCCGGTGATGGACAAGGCGCTGCCAGCGCCACTGATCACCATGGCGGC GCCCATTCGCAATCCACAGGGCCAGGTGATCGGGGCTCTGGCTGGCATGA TCAATCTAACATTGCCTAATCTGCTGGACCCGATCAGCCAGGGCCGTTAT GGCAAGACTGGCAGCTATCTGCTGGTTGCGCGACCAGCCCGGATGGTGAT CACCAACACCGACAAAAAACGGGTCATGGAGGCAGCGCCTGCGCCCGGCG TCAACCGCCTGATTGACCGCTTCATGCAGGGTTATGAGGGTTCCGCAATT TTCGTTGACCCCTTTGAGGTGGAAACACTGACCTCGGCCAAGGGCATCAC GCTGGCCGATTGGTACGTGGCGGCGGCATTGCCCACCGCCGAAGCCTTTG CACCCATCGACGCCATGCAGCGGCGTATTGTGCTGGCCACCGTGCTGCTG ACCCTGCTGGCGGGCGGCCTGACATGGTGGATGCTGCGCCGGCAACTGGC GCCGCTGCTCGCCACCGCCGAAACCTTGGTGGCCCTGCCCACAGCCCAGA CATTTCCGATCGCGCTGCCCGTCGCTCACCCGGACGAAATTGGCCACTTG ATTGATGGCTTCAATCACCTGCTGGCTCACCTGCACCAGCGTGAGACCCT GCTCAAGCAGATTCTTGACACCTCCAGCGCCGCCATCTTTGTCATCGACT CACAGGGCCGCATCACGCAAGCCAACCAGCGCATGGCCGAGATGTTCGGT TGCCCGCTCGACACCCTGATCGGGCATGACTACGTCAGCCTGGTGCACCC GGCGGAGCGCAATGTCGGACAACAGAACATGCTGGCTTTGCTGGCCAACA AAGTCTCGTCCTCCGATTTGGAGCGCCTGTATTGGCGCGCCGACGAATCC GAATTCTGGGGCCACCTGGCGTGCCGCGGCTTCCACGACGCCAGCACCCA TCAACATTGCTTTGTCGGTGTCATTACGGACATCACCGAACGGATCCAGG TCGGGAAATTCGAGCAACTTCGCAGCCGCATTCTGGAGCTTCTGGCAAGC GGTGAGCCACTGCCCCTCATTCTTGAAGCCCTGGTGCGCGGCGTGGAGCA ACTCAACCCCACCATGCTGTGCAGCATCTTGCTGCTCAGCGGCGACGGCC AGCATCTGGGCCAAGGTGTGGCGCCGAGTCTGCCCGACTTTTATAACGCG GCCATCGACGGCATTGAAATCGGCGCCGGTGCCGGCTCCTGCGGCACGTC CGCCTTTACCGCGGAGCGCGTCATCGTCAGCGACATTGCAACCCATGTGT ATTGGCAGCGCTACAAGGAACTCGCGGCACGCGCCGACTTGGGCGCCTGC TGGTCGCAGCCCATTCTTTCCTCCCTGGGCCAGGTGCTGGGAACCTTTGC CAGCTACCACCACACCACCCACACGCCGACGTCGGCTGAAATTGCCTCGG TTGAGCGCTTTGCCCGGATCGCCGCCATCGTGATTGAAGGACAAGCCGCG GCCAAAAAAATGCGCGACAGCGAAGAACGTTTTCGCACCCTGATCGAGGA ATCACCCGCCGCGATCCTGGTCCATCGTGAGCTGCGCATCATTTATCTCA ATCCAGCCGCCATCGCGATGTTTGGTGCCCGCACAGCGCAAGAACTGGTC GGCAAGGCCCTCCTTGATTTGATTCATCCGGATTCCCATCAAGTCGCCAC GGCGCGCGTCAGGCACATCACCAACACCGGCCATGCGGCGCCTCTGATCG ATGAAAAATATCTCAGGCTCGATGGCACGCCGATTGACGTGGAAGTCCAG AGCACTTCGATTATTTACGAGGGGCTAGCGGCCATCCGGACTGCTTTTCG CGACATCTCCGAGCGCAAACTGGCGCACGACAAGCTGCAACTTGCGGCCA ACGTCTTCAGCCATGCCCGCGAGGGCATCGCCATCACCGACGCACGCGCC ACCATCATTGATGTCAATGAGGCTTTTTGCCGCATCACCGGCTACAGCCG GGACGAAGTGCTGGGCCAGAACCCGCGAGTGCTGGGCTCGGGCCGCCAGG ACAAGGCGTTTTACGCCGCCATGTGGCACGACCTGGGCGAACAAGGCCAT TGGTACGGTGAAATCTGGAACCGGCGCAAAAACGGCGAGTTGTACCCCGA GATGCTCACCATCAGCGCCGTGCGCACGGACCAGGGCCAGGTCCAGAACT ATGTCGCGCTGTTTTCCGACATCAGCGCCATCAAGGCGCACCAACACGAG CTCGAACACATTGCCCACTTTGACGCCCTCACCAACTTGCCCAACCGGGT GCTGCTGGCCGACCGCTTGCAGCAAGCCATGGCGCAGGCGCAGCGCCGTG GCCAGATGCTGGCGCTGGCCTACCTCGACCTCGACGGCTTCAAGGCCATC AACGACCGCCATGGCCATGAAGCCGGCGATCTGCTGCTCATGACAGTCGC CACCCGCATGAAGCAGACCCTGCGCGAGGGCGACACGCTGGCGCGCATTG GTGGCGACGAGTTCGTGGCGGTGCTGCTCGATCTGAGCGACAGCAAGGCC AGCGCGCCCATGCTCAGCCGCTTGTTGGCGGCGGCGGCCGAACCGGTGCG CCTGGGCGATCTGGCGCTGCAAGTTTCGGCCAGCCTGGGTGTGACCTTTT ATCCGCAGGTCGATGAGATGGAAGCTGACCAGTTGCTGCGCCAGGCCGAT CAGGCCATGTACCAGGCCAAGCTGGCGGGCAAAAACCGCTACCACTTTTT TGACGCGGCACAAGACCGCAGCGCGCGCGGACATCATGAGAGCCTGGAGC GCATCCGCCAGGCGCTTGACCGACGTGAATTCGTGCTCTATTACCAGCCC AAGGTCAACATGCGCACCGGCGCCGTGATTGGTGCTGAAGCGCTGATTCG CTGGCAACATCCCGAAAAAGGGCTGCTTGCCCCGGCCCTGTTTTTGCCCG TGATCGAGGATCATCCGCTGGCCGTCGATATTGGCGAGTGGGTGATCGCC ACCGCGCTGATCCAGAACGAGCTTTGGCAGGCCGACGGGCTGGACATGCC GATTAGCGTCAACGTCGGCGCACGCCAGCTCCAGCAGGCCGACTTCGTGC CACGCCTGCGCGAGCTGCTGGCCGCACAACCCGGGGTCAAGCCGTTTCAG CTGGAAATCGAGGTGCTGGAGACCAGTGCCCTCGAAGACTGGGTTGGCGT GTCGCAATCGATTGAAGAATGCCGGGAAATGGGGGTGCTGTTTGCCCTGG ACGATTTTGGTACCGGCTATTCGTCGCTGACCTACCTCAAACGTCTGCAA GTCGATCTGCTCAAGATTGACCAGAGCTTTGTGCGCGACATGCTCGACGA CCCCGACGACATGGCCATTTTGCAGGGTGTTATCGGCCTGGCCGGTGCGT TTCGGCGCAACGTCATTGCCGAAGGTGTGGAGACCATTGCCCACGGCACC TTGCTGCTGCAACTGGGCTGCGATCTGGGGCAAGGCTTCGGCATTGCGCG GCCCATGCCCGCCGACCTCTTTCCGGCCTGGGCGGCAAGCTGGCAGCGCG ATGCAGCCTGGGTTGCCGCGGGCGGCACGGACCACCCGTCGCTCATGGCA ACCCTTCAATAG >Rfer_2826 UspA ATGTACAAACGAATCTTGCTGGCTTATGACGGCTCTGCCCCGGGGCAGCA GGCCCTGCTCGATTGCAATGAAATCGCGCAGTGGAGCCATTCTGAGTTAA CACTGATTGCCGTGATGCCGCTGGCCCTGACCGTCATCGGTCCCGAGAGC GGCGTCTACGACGAGTCGCTTCAGGCAGGCGAGAAAGGCCGCTATCAGGC GATTCTCGACACCGGTGTGCGCAAGCTGGCCGATGCCGGGATGACCGCGC GCGGCGAAGTGGTGATCGGGGATGCGGTGACTGAGATTGCGCGTTGCGCC CGTCGGATCGACGCCAACCTGATCGTTGTCGGTCACAAGCATCTGGAGGG CTGGGCAGCGCGCTGGTGGCGCGGTTCCATCTCCAAGGCACTGATTGAGC ACGCACCCTGCAGCGTGCTGGTGGTTATCACGCATTGA >Rfer_0893 response regulator receiver sensor signal transduction histidine kinase ATGCCTTTAGCCGTGAACCCGCCCAGGATTCTCATCGTCGAAGACGAAGC CATTGTCGCGCGTGACATCGAGCAGCAACTGGTGGCACTGGGCTACCAGG CCGTGGGCCGCGCCACCCGCGGCGAAGAGGCCATTCGTTTGGCGGGCCAA CTGCGCCCGGATCTGGTGCTGATGGACATTCAGCTCGCGAGTGTGATGGA CGGCGTCGCGGCCGCCCAGGCGATCCGCACGCAGTTTGCCCTGCCCGTGG TGTTCCTGACCGCCTTTGACGCCGACCAGATTCTGGCCCGTGCGAAACTC ACTGAGCCCTTTGGCTACATCCTCAAGCCTTTCTCCGAACGAGAGCTGCG CAACGTACTGGCGATGGCGCTGTACAAGCACCAGGCAGAAGCCAAGCTGC TGACCACCACCCGCCAACTGCAAGCGCTGTCCCGGCGCGTGCTGGAGGCA CAAGAGTTTGAGCGCCGCCGCGTGGCCATAGAGCTGCACGACGAACTCGG CCAGTCCCTGACAGCCATCAAAATCAACTTGCAATTGAGTGAACGTCTCC ATGACGGATCATCCAGTGAACTTAACGCCGAAAACATCCGCATTGTTGAA GACGCCCTGCAACAAGTGCGACGCCTCGCAACCGGGCTGCGGCCCGCCAT GCTTGATGACCTGGGGCTCAGCCCGGCCGTGCAGTGGATTGCCGAAGTAA TCGCTGCCCGCAGCAACTTTACAGTCCATTTTTGCCCGGAAGACATGCCC CAGAGGCTCGCGCCCGACATCGAGACGGCATGTTTTCGCATTGTCCAGGA AGCGCTCACCAACATCTCCCGCCACGCCCAGGCAAAACGGGTCACTATCA CACTGCGCCGTATGAGTAATGCCCTTTTGCTGTGCGTGCAGGACGACGGC AACGGCTTTGACCTCCATGCCATGCGGGAACGTGCCATGCTTGGGGGCAG CATTGGCGTGCTCGGCATGCAGGAGCGCGCTATGCTGATCGGTGGACAGC TTGACATTGAATCGGCCCCGGGGCTAGGCAGCATGGTGCAGTTAAGTTGC CCATGGCGCACACACCTGGAAGCGGCATGA >Rfer_1427 diguanylate cyclase/phosphodiesterase ATGACGCGCTTGAAGTTGCCACGAATCACAGTCTGGGTGCTGGGGCTGGC GGGTGCGTTCCTGCTGTCGCTCGCGCTGGCCGCCGCCAGCCTGGTGTGGT CGCTCAAGCAGGCCGCCGTGAACGAGGCCGAAGCTGAAGCCGCACGCTTT GTCAGTGGTGCCGTGGTGGCACTTAACCGAAGCCTGCTGGGCGTGGATGT GTTGCTTGCCAGCCAGGACGAGCAGCTGGGCCTGTCACTGCTGGTGCCGG ACTGGATTGATTCCGCCGCGGCCAGCCGACAGATGCATGGCACCGTGCAG CAAAACCTGATGGTGCGCCATCTCGCGCTGCTCGATGCTCAGGCCCACGT GTTGGCCTCATCGGATGTCGATGGTGTCGCCCTGGACTCCTGGCTGCCAG CCGGCTTTGTGGCGCAGGCGTTGGCACAACCCATGTCGGAGTTGAGCATC AGCGCACCGGTCGTCAATTTCGCCAGCTCAGAGCGGGTTATTTACTTTGG GCGCCCCATCAAACTGGCCGACAATTCCAGAGTGCTGGCGGTGGCCGAGG TACAGGTGTCACTGCTCAATGCCATCCTGAGCCAGGGTGTCAGCATCAGT GGGCTGGAAATCACGCTCGAGCGCGGCGACGGGCAGTTACTGTCGAGCGA ACCGGCTCAGGAGCAACTGTGGGGCACACAACTGTCGCCGCCGCTGGGCC AAGTCGGCACGCAAAAACAGGTGCTACGCGGGGCGGCACGGCTCAGCGGC CAGGCCGCCATCGTACTGGCACAACCAACTTTGTATCGCGATATCTTCAT TGCCGCCAGCATCCCGATCGATGCCGTGCTGGCGAACTGGCGCGAGCAGC GCAATTTCATCCTGGGCGTATCGCTGTTGTTTGCCTTGATGATTCTGGCC TCCGGCGGCTTGGCCCTGTGGTACCTGGAACGCCTGGCACAGGCCCGCCA GGCCATTGCCTCGTCGAAGGCCGAGATTGAGCAACTGGCATTTTTTGATC CCTTGACCAACTTGCCAAACCGCAGATTGTTGATGGACCGGCTGCAGCAT GCCCTGAGCGCCAACGCGCGCAGCGGCCGCTGTGGTGCCCTGCTGTTTCT GGATCTGGACCACTTCAAAACCCTCAACGACACCTTGGGGCACGAAGTGG GCGACCTGCTGCTGCAACAGGTTGCCCAGCGCTTGAAGACCTGCCTGCGC GAACAGGACACAGTCGCGCGCCTGGGTGGCGACGAGTTCGTCGTCATGCT CGAAGACCTGGCCGAGCACAGCCTGGAAGCCGCCGCCCTGGCTCGGCGCA TCGGCGAAAAGATTCTGGCATCTCTCAACCAGCCCTACGTGCTGATGACG CAAACTTACCGCAGCACCTGCAGCGTGGGCGCTGCCCTGTTCGAGGCCAC AACGCCCATTACGGCGGCAGATTTGCTCAAACAAGCCGATATCGCCATGT ACCAGGTAAAAGCACGCGGACGCAACGACCTGTGCTTTTTTGACCCGCAG ATGCAAGCCAGCATCACGGCCCATGCCCAGCTTGAAGATGATTTGCAGGC CGCACTGGTGCGCGGCGAGTTTGCGTTGTACTACCAACCCCAGTACCAGC TGCAGGAAGGTGTGGTCGGGGCCGAGGCCCTGATCCGCTGGCTGCATCCG CTACGCGGCCTGGTGCCACCGGTGGAGTTCATCGCGGTGGCGGAAGAGAG TGAATTGATCAACCAGATCGGCCTTTGGGTGCTGCGCACGGCCTGCCAGC AACTGGCGCGCTGGCAAGGTGATCCTCGGGCCTGCGATTTACATCTTGCG GTCAACGTCAGCGCGCGCCAGTTTCGCCAACCGGACTTTGTGGCGCAAGT CAGCACCGTCGTGCACGAGTCCGGCATCAAGCCGCACCTGCTCAAGCTGG AACTGACGGAGTCACTGGTGCTGGACAACGTGATGGACACCATTGCCAAG ATGAACGAGTTGAAAGACCTGGGGGTGCGGTTCTCGATGGACGACTTTGG CACCGGGCAGTCCTCACTGTCTTACCTCACCCGGCTGCCGCTGAACCAGC TCAAAATCGATCAGTCCTTTGTGCGCAACATTGGCCTTCAGGCCACCGAT GATGTCATTGTTCAAACCATCATCGGCATGGCGCGCAGCCTGGGTCTGAG CGTGATTGCCGAGGGCGTCGAGACGCCGGCGCAGCAAGAATTCCTGGCGC TGCATGGCTGCACCCTGTACCAGGGCTACCTGTTCGGCAAGCCCACTGCC CTGCCCGACTTTGAAGCCCTGTTGGGCGCAGCACCGGCCCTGCCTTGA >Rfer_0895 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGAGTCTGCCAGGCTCTCTCTGCGCCAACAAGGGCCGGATTCTGGTCGT GGAAGACGAAATGATCGTTGCGCGTGACATCGCGCAACAATTGGTGGCAC TCGGTTATCAGGTGGTGGGCCATGCCACGCGGGGGCAAGAAGCCATTGAT CTGGCCGGGGCACTGCAGCCGGAGCTGGTGTTGATGGACATTCAACTCGC TGGCGCCATGGACGGCATTGCCGCCGCCCAGGCCATCCGCCTGCAATTTT TACTTCCGGTGGTGTTTATCACCGCTTTTGCCGCCGACGAGGTACTGGCG CGTGCCAAGTTGACGGAACCGTTTGGCTACATCCTCAAACCATTCTCCGA ACGCGAGCTGCGTACCGTGCTGGAGATGGCACTCTACAAGCATCAGGCCG ACAGCCAGGCACGCGACGCGGCCCGGCACACGCAGGCCATTCTGGACGGT ATGGTCGACGGCGTCATCACCCTCAACGCGCAGGGCCTGATAACCTCGAT CAACCAGGCCGTCAGCACCCTGTTTGGTTATGCGCCCGAGGAACTCCTGG GGCACAACGTCGCGATGCTGATGCCCAGTCCCCATCGCAGCCTGCATGGC GGCTACCTGCGACGCCATCAGCACACGGGTGCGGGCTGCGCGATGGGCCA AGGGCGAGAGGTCGACGGCCAGCGCCGCGACGGCAGCGTTTTCCCCATCA GCGTGTCGGTCTCCGAACTCATGCACAACGGTCAGACTCAGTTCATCGGT CTGGTGCATGACATCACGCAACGTCGACGCAGCGAAGAAAACATCTACCG GCTGGCTTTTTACGACAAGCTCACGGGCCTGCCCAACCGGCGTTTGCTGA TGGACCGCCTCAAGCAAGCGCTCATTACGTCCACCCGAACGGGTCAGCAC GGCGCCCTGATCCTGCTCGATCTGGACCACTTCAAACAGATCAATGAGAC GTTCGGTCTCGACGCTGGCGACGAACTGCTGCAGCAGGTGGGCCAGCGCC TGCCGACTTGCGTGCGGGACGATGACACGGTGTCGCGTTTCGGTGGCGAC GAATTCATGGTGATGCTTGAAGCCCTGAGCAGCCAGCCTCAGGAGGCGGC AATTCAGGCCGAAGCCATCGCTCAAAAAATTCTCTTGGCCCTGGCGCAGC CCTACCGATTGCGCGGGCACACCCATGGCACCACACCCAGCATTGGCGTG GTTATGTTCCGGCAGGCGCAAGTCAGCTTGGACGATCTGCTCAAGATGAC TGACGTCGCCATGTACCAGGCCAAAGCCGCCGGGCGCAACACTGTTCGTT TTTTCGACCCCGCCCTGCAAGCGCTGGCGCTGGCGCGCACCGCGCTGGAA GAAAACCTGCGCCGGGGCCTTGCCCTGCAGGAATTTGTGCTGCACTACCA GATTCAAGTCGACCATCAGGGCCTGCCCACCGGGGCTGAAGCGCTGCTGC GCTGGCAACACCCGGTCCGTGGCATGGTGCCGCCGGCCCAGTTCATCCCG CTGGCCGAAGAAACGGGCTTCATCCTCCCTCTGGGCCAATGGGTTCTGGA GAGCGCCTGCCGACAATTGGTGGCGTGGTCCCACCAGCGGGCAACCGGGT CTTGGACCCTGGCCGTCAATGTGAGCGCGCTGCAGTTCGCCCAGCCCGAC TTTGTGGCGCATGTCACCAGCGCGCTGCAGGCCACCAGCGCCAACCCCAC CTTGCTCAAGCTGGAGCTGACCGAGAGCATGCTGGTGGGTGATGTGCAGG ACGTCATTACCAAAATGAACGCACTCAAAGCGCAAGGCGTGAGCTTCGCG CTCGACGACTTTGGCACCGGCTATTCGTCGCTGTCTTACCTCAAGCGCCT GCCACTGGACCAGCTCAAGATTGACCAGTCGTTTGTACGCGATCTTTTGA TCAACCCCAATGATGCGGTGATCGCCCAAACCATCGTGGCGCTAGGCCAC AATCTGGGACTCCAAGTGATTGCCGAGGGTGTGGAAACAGTGGGCCAGCA CGACTATCTGGCCAGCATCGGCTGTGACGCCTTTCAGGGTTACTATTTCG GGCGACCGGTGCCAGCGGCAGAACTGGCTTGTCTTCTAAAACAAATCAGG CCCTAG >Rfer_2262 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGAACCCAAGCACCCGCACCTGCATTCTCATTGTTGACGATGTCAACGA GAACCTGCACGCACTAATGAACATCCTGCGCGATGACTATGCCATCCTGG CGGCCAACACGGGTGAGAAAGCCCTTGAACTGGCGCGGCGCGTGCCCCAG CCCGATCTGATTTTGCTGGACATCAAAATGCCCGGCATGGACGGGTATTC CGTTCTGGCACACCTGAAAGCCGATCCGAAAACCGCCGACATTCCGGTGA TCTTTGTTACCGCTTTGGCCGATGCTGCCGACGAGGCGCGTGGCCTGACC CTGGGCGTGGCCGACTACATCACCAAACCGGTCAACCCGGACTTGCTGCA TTTGCGGGTGCGCATCCAGCTTGAATTGCAGCGCCATCGCAGACAACCGG TCACTTTTGACATAGCCCACCAGCAAGAGCGCCAGGCGTCGCTCCTGGTG GTGGACGATGTGCCGGAAAACATCCACGAATTGCTGGATGCCCTCAAGGA GGAATACCGCATCATGGTGGCCAACTCAGGGCCCAAGGCCCTTGAATTGG TGCAGGGTCCGACACCACCCGACCTGGTGCTGCTGGACATTGTGATGCCC GGCATGGATGGCTACGAAGTGTGCCAACGCATCAAAGCCAGCGCCGCAGG CAATGGCATTCCGGTGATCTTTGTTACCGTGGTGGATGCAACTGATCAAA AGGTCAAAGGGTTTGACCTGGGCGCGGCCGACTTTATTAGCAAGCCATTC GACATTGATGAAGTACGCGCCCGTGTGCGCACCCATCTAGAACTGGCCCG GCTGCGCTTCTCGCTGGAGCAACTGGTGGCACAGCGCACCGCCCTGCTAA ACAAAAGCGAAGAAAAGTACCGCATCCTGGCCGACTACTCACCCAACTGG GAATACTGGATGGCACCCGATGGCAGCTACCTGTATGTGTCGCCCGCTTG TGTGCACGAGTCCGGTTACGCTCCGCAAGACTTTTTCGACAATGCTGAAT TGATGGACACCATCATCCATCCGGATGACCTGTCTGCCTGGAATAAATAC GGTCCGGCCGCTGCGGGTACCGTGTCAGAACCGCTGATTTTTCGCATCAA GGCAAAAGACGGCGGCGAACGCTGGATCGAACACGTCTCCAACAGGGTGC TGGACACATCGGGGCGTTCACTTGGCCAACGCGGCTCGCATCGCGACATT TCCAAACGCCACGAGACCGAGCAACGACTGGATTTCTACATCAACCGCGA TCCGCTCACAGGCTTGCCGAACCGGGTTCTGTTTCGTGAGTTTTTGGGCC GCACTTTGCAGCGTGCTGAGCGTGACCAGTCACAGTTCGCGCTGTTGATT GTCAATTTGGACAACTTCAATAGCGTTAACCAGAGCCTCGGTCACAGCCA GGGTGACCAACTGCTGATTGAGGCCAGCAAACGCCTGCGCACGCTGCTGC CAGACCTGGATGCCGTTGCCCGCATCAGCGGGGATGAGTTCAACATCATC TTGAACCAGGGCGAAAATGCGCCGCCGATTGATCTGGTTGCGCAGCGCAT GATTGATGCCTTGGGAATCCCGTTCAATCTCAATGACAGCAGCGTCTATG TGGGTGCAAGCATCGGCATTTCCATGTACCCGTCCGATGGACGCGACGTC GAGACGCTGCAAAGCAATGCGGCGGCGGCGCTGCACCAGGCCAAGTCGCG CGGTCGAGGCATGTTGCGGTTCTTCTCCATGGAGATGATGGGCCGCTCCA AAGCGCGGCTGACGCTAGAAGCCGCACTACGCCAATCGGTCGAACGTGAC GAACTTCGGCTTTACTACCAGCCGCAAGTGGACCTGATCAGCGGCGAAAT AGTGGGCGTGGAAGCGTTGGTGCGCTGGCAGCATGCCGAGCGCGGCCTGA TTCCACCCAACGAATTCATACCTTTGGCAGAAGAAAGTGGCTACGTGGTC ACGCTGGGCGACTGGGTTTTGCGCACTGCCTGTCGGCAGATCAAGCAATG GGCAGGGTTGGGCTTGCCACTGCGCCAGGTGGCGGTGAACGTGTCTGCCG TTCAGTTAAGCCGCGGCAAACTGGTTGAGTCGGTGAAGGATGCCCTGCAA GAAACCGGCATTGCACCGGGCATGCTGGAGCTCGAAATCACGGAGAGCAG CGTCATGCTGGACCGTGAAAGGTCATTGGAGACACTGGCCAGTCTGAAAG CCCTGGGCGTACAACTATCGATTGACGACTTCGGCACAGGTTATTCGTCT CTGGCATACCTCCAGCAGTTGGAAGTCGACAAGCTCAAAATTGACATTGC CTTTGTGCGCGACATGACCACCAACAGCAACAATGCCGCCATCGTCAAGG CGGTCATCGCTTTGGGGCACAGCCTGGGTCTGGAGATCATTGGCGAAGGC GTAGAGACTGCTGACCAGGCACGCCATTTGCGCACTCTGCGCTGCGACAT CATGCAGGGGTATATGGTCAGCAGGCCGATACCGGGCGCGGAGATGACAC AGTTCATGCGCACCTTCAAACCCGTCGTCATCCCGGCGGGTGACCAACGT GCGGCTGGTTGA >Rfer_0458 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) ATGCAACCATTTCAACAGGGAAGGTTTGTGATGCCAATTCTCGCTAAGCC CATGCGCCCAGCCCTGGTTGGCATCGTCGTCTTCCTGCTCGCGGGCCTGG TGGCTGGTGGCCTGGTCTATCGCTCGGAGCAGCACCGCCGGCAGCTGGCG CAGTCCCGTGCGCTGGCCATGGCCGCCGACCATGCGCAGTCCTTGCAACA AAATCTGCAGCAAGCCTTGGGTCCGGCGCAATTCGAGCAGGTGGTGGCAC GCGGCTATGACTATGTGCTGTGGCGCATCGATCCGGCCAGCCAACAGCGC CAGATCATCGCCCAGTCAGCCAAAGTCCCGCTTGACGCCGTTGATTTTGA ATTGAAAGTTCCCAACGCCAAGTGGACCCTCAGCGTGGCGCCCACGACGG GTTGGGCAGACCCGCAGGGCCTGAGCCTGAAAGTCGCGCTGGCGGCGCTG TTCAGTGTGCTGCTGGCTTACAGTGCGAAGCAGGCGGGTGCCGCCAGAGT CCGCGCGAACGAACTTCAAGTCGACGTCAATGCGCAGGCAGTAGAACTCG TGGCGCTCAACCAGCGGTTGCAGAGCACGCTCGACGCACTGCCCGATCTA CTCTTTGAAACGGACATGGACGGTCGCTATCTGGCCTACCATTCGCCGCG CTCTGAGCTGCTGGGCAAGACGCTGCATCGGGTGTTGCCGGTTGCGGTGG CAGATATTTGCCTGGCGGCGGTGCATGAAGCCAATGCAGTCGGCTACTCG CACGGCAAGCAGATCCAGCTAGCCCTGCCGGACGGCGCGCATTGGTTCGA GCTCTCCGCTTCACGCAAGCCCGGCCTGCCAGGTGATGCGCCGACTTTCA TTGTGCTGTCGCGCGACATCACCGAGCGCAAGAAGGCTGAAATCAAAATT GAGCGCCTGACCAAGCTTTATGCGGCCCTGAGCCAATGCAACCAGGCCAT CGTCCGCTGCAGCGATGCCAGTGAATTGTTCCCGATCATTTGCCGGGATG CCGTTAATTTTGGCGGCATGAAAATGGCCTGGATCGGCATGCTCGATGAG GCTGACCAGTTGATCAAACCGGCGGCCTCATTCGGCAGCGGTGTCGAGTA CCTGGAGGGGATAGAAATTTCAGTTGATCTGAGCGGCGACAAGGGTCGCG GCCCCACCGGCACATCAATTCGTGAAGACCGGCCGTTTTGGTGCCAGGAC TTCCAGCACGATGACGCCACCGCAGCTTGGCATGAACGCGGCGAGCGCTT CGGCTGGGGCGCCTCGGCGTCGCTGCCCTTGCACCTGAAAGACCGGGTGA TCGGCGCCTTCACACTGTATGCGGGTGAAGCGTGTGCCTTTGACGAAGCA GCGCAAAACCTGTTGCTTGAAATGGCGCTTGACATCAGCTTTGCGCTGGA CCGCTTTGCCGACGAACGTGAGCGCAAGATCATGCAGGACGATTTACGCG ACAGCGAGGAGCGCTATCGCAAAGCGTTCCAGACCAGTCCGGATGCGGTC AATATCACCCGGCTGGTGGATGGTCTCTACGTCGATGTGAACACGGGTTT TGAGCGCATCACCGGCTGGCGGCACGACGAGGTGGTGGGCAAAACCGCCA CCGAACTCAATCTCTGGGGCAACCCGGCAGACCGGATGCGGCTGGTTGAC GCATTGCAGTCCGAAGGACGTTGCAACAATCTTGAGGCCACTTTCGTCAA GAAAAATGGCGACATCTTTCACGGCTTGATGTCAGCGGAAAAAGTCCGCT TCAAAGACGTTGACTGCATTCTCTCCATCACGCGCGACATCACCGAGAAG AAGCTGGCCGAGGCGCAGATTCAACAGTTGGCCCATTTTGATCAACTGAC CGGCCTGCCCAACCGCAGTCAACTCCATGATCGCTTCCGGTACGCGCTCA GCCTGGCGCAGCGCCACGGCGACCAGTTGGCCATCATGTTTCTCGACTTG GACCACTTCAAGAATATCAACGACACCTTGGGGCATAGCGTTGGTGATCA ACTGCTGGTGGACGTCTCGCGCCGACTCAAGGCCGCGCTGCGGGAAGAAG ACAGCTTGTCGCGGCTGGGGGGCGATGAATTTATTCTGTTGCTACCGGGC ACTGATGAAGCGCAGGCCAGTCAAGTCGCGACGAAGTTGCTTGCCGCCGT AGCGCAGCCGTGCCAGATTGAACAGAATGAATTGGTGAGCACGGTGTCGA TTGGTATCGCCCTTTATCCCAATGACGGACAGGATTTTGAAACCCTGTCA AAAAACGCCGACGCCGCCATGTATCGCGTCAAGCAAGCCTCGCGCAACGA TTTCCGCTTTTTCACGCAGGAGATGCAGACCCATTCGGCGCGCACCCTGC AATTGGTCAACGCCCTGCGCCATGCCCTGCCCCGGCATGAATTTGAGCTG CATTTTCAGCCGCAGGTCGCCTTGCAGGATGGTCATATTGTGGGCGCCGA AGCCCTGCTGCGCTGGCGCCATCCCGAGCTCGGCATGATCTCGCCGGCGG AGTTCATCCCGATTGCCGAAGACAGTGGGCAGATCCTGGCGATTGGCGAG TGGGTGCTGCGCACCGCCGTCAGGCAATTGAAGCAGTGGCTGGATGCCGG GCTGCGGCCCATGGTGATCGCGGTCAACCTGTCAGCGGTGCAGTTTCGCC ATCCGAACCTGATGGCCCTGGTGACGCGCATCCTCGACGAGGCCGCGCTG CCCCCCGAATTTCTGGAGCTGGAGCTGACGGAGGCCGCCGCGATGGACGA TCCGCCGGCCGCCATCGCGATCATGAACAAGCTCGACGAACACGGCATCC GCATGTCGATTGACGACTTTGGCACCGGCTACTCGAGCCTGAGCTACCTG AAGAAATTCAAGGTCAACAAGCTCAAGATCGATCAGTCTTTTGTACGCGA CATCAGCGATGATCCGGATGACAAGGCGATCGTCACCGCGATCATCAATC TGGCCAGCAGTTTGGGCATGCACACCATTGCCGAGGGGGTGGAAACGGCC AGTCAACTGGCCTTTTTGCGCTTGCAGGGATGTGATGAGGTGCAGGGTTA TTACGTCAGCAAGCCGCTACCTAAAGATCAATTCGAAGCGTTCGTGCGTA ATAGCATCAGCTGA >Rfer_2728 serine/threonine protein kinase ATGGTTGATTTTTCACCGTTGAAGACCATCCGCAAGCTGGCGCCTGGCCT GTCTGCGCCAGCTCAGCCCGCCATGCTGGGGCGGTTTGAGCTGCGCTGCA TCCTGGGCCGGGGGGCGCAGTCGACGGTCTGGCTGGCGTTTGATCCGCGC CTGGAGCGTGACGTCGCGATCAAGCTCATGAAAATCGGCGCCGGCTCGGA TGCGTCGGCCCTTGCCCAGTGGCTGCAGGAGGCGCGCAGTGTGAGCCGCC TGACGCACCCCAACATCGTGCCGGTTTTTGAAGCTGACGTACAGGATCAG CAGCCTTATCTGGTGTTCGAGTATGTGCCGGGGCAAACGCTGGCCGACCG GCTGGCCAAACAGGGTGCCATGCTGCCGACTGAGGCCGTGGCCTTGATGC TGGGCGTGCTGGATGCTCTGGTGGTGGCCCATGCCGCCGGTGTGATACAC CGCGATTTGAAGCCGTCCAATATTGTGATCGACCCAACCGGGCGCGCGCG GGTGATGGATTTTGGCATTGCCGCACGCATACAGGAGGAGGGTGGCAACA GCGCCGAGGTGCCAACGGGCGGCACGCCGGGCTATATGTCGCCCGAGGCG GCGCAAAACTTGCCGCCCACGCCGTTGATGGATATTTTTTCGGCCGGCAT GGTGCTGGCCGAAATGCTATCGGGTCAGCCGCTCAATGCTGAACGCGATC CCTATCGTGCGATTTACCGGGTGCTGCACGAGCAGTTCACGCTGTCGCCC GACTTGAGTGGCGATGTTGACGATCAGCTGCGTGCGGTGGTCATGCGGGC GCTGGCGCGTGATCCTTTGCAACGTTATTCCAGCGCGCAGGTGTTTCGTG ACGAGTTGGCCAACTGGTCGGGTGTGGCAGCGGCCAAAGCCGGACAGAAC ACCGGGGCGGGCGCTGCCAGCAACAACAGCACGCTGGCGTTTTTGTTGCG GCGCATGCGCCACAAGAGCGATTTTCCGGCGCTGTCGGATGCGGTGCTGC GCATCCAGAACATGGCAAGTTCAGAAAAAGAGAGCATCAACAGTGTCACC AATGAAATCCTGAAGGACGTGGCCCTGACCAACAAACTGCTGCGTTTGGT CAACAGCGCGCATTACGCCCGCGGCAGCAGCATCGGCACGGTGTCACGGG CGGTCAGCCTGGTGGGTTTTAACGGCATTCGCAACATGGCGCTTAGCCTG GTGCTGTTGGAACACATGCAGGACAAAGCCCATGCCCATGTGCTGAGAGA AGAATTTTTGCGTTCCCTGATGGCCGGCTCGATCGCCAGCGAGCTTTGCC CGGGGATGCAGGGCACCGAGGAAGCTTTTCTTGGCGCCATGTTTCATAAC CTGGGGCGCTTGCTGGCCGCGTTTTACTTTCCGGAAGAAGCGCGCACCAT ACGCGGCCTTACCGAAACCAGCCACCAGCCGGTCAGCGAAACCACCGCGT CCGTCAGCGTGCTGGGTTTGAGTTTTGAGGCGCTGGGTGTCGGGGTCGCC AAAGCCTGGGGTTTGCCCGAGGACCTGCAGCGCTGCATGCACAAGCCCAG CGGCGAGCCACCCACGCGCACGCTGCTGGACGGGGTGGAACGTCAGCGTT GGCTGGCCCTGGCCGCCAATGACATGGCCGACGTGATGCTGCACGCCGAT CCTCAGGCGGTCGACGGGCAACTGGCGCAGCTCGGCAAGCGCTATGCCCG AGCCCTGGGTGTGAGCAGCAGCGAGGTGCAGGTGGCCACAATCGTGGCAC GCAAAAAATTGATCGAGATGGCCAGTGTCATGGACATCAAGGTGCTGCCC GGCTCGGCTGCCGCCAAACTGCTGAAGGCGCCCGCAGAGCCTGACGGCCC GCACCCGAATTCAGGCGACGAAGCGTCCGACTCGCTGTATCCGATGGCCT TGCAAGCCACCCAGGCGGTCCTTGCGCAAGCGAACGAAGTTGAGGCGCGC GATACCCAACAAGTAGCGCAAATTCTGGCGGCGGGCATTCAAGACATCAC CAACACGCTGGTGGAGGACTTCCAACTGAGTGATGTCTTGCGCATGATCC TGGAAACCATGTTCCGGGCCATGGGCTTTCAGCGCATCATCTTCTGCATG CGTGATCCAAAAACCGAGATACTGTCTGGTCGCTTTGGTTTGGGACAGGG TGTCGAGCACCTGGTCAAACAATTTAACGTGTCGCTCAAAACGACGCCGC CCGATCTGTTTGCAGTGGTGTGCAGCAAGGGCATTGACACCATGATCCGG GACGCAAGCGAAGCGACCATCACCTCTCGTCTGCCCGCCTGGTATCGTGA ACTGTTCAACGCGCCGACCTTCTTGCTGTTGCCGGTGAACATCAAGGGCC GACCCTTTGGCTTGATTTACGCTGACAAAGCAGACAAGGGCGGGCTGGTG CTCGATGAGAAAGAGCTGGCCTTGCTCAGAACGCTGCGCAATCAGGCCAT CATGGCGTTCCGCCAGTCCACCTGA >Rfer_2553 response regulator receiver and ANTAR domain protein ATGAACCCATCGCTGCGTATCGTCGTTGTTGCCCCTGATCTGGACGTTGC CAATCCTGAGGACGAGCAAGCCATTCGCCAGGCCGAGCGCTCGCGCAACC TGCGTATTGGCCTGCTGGAAAACGGCTTCAATCTGGTGGCCACCCTGCCA GCCGACGTGTTTCTGACCGAGCGCATTGCCCAGCTGCAGCCCGACTTGAT CATTGTGGACGCCGAAAGCGATGCCCGCGACTCGCTGGAGCACGTGGTGA TGGCCACGCGCGAAGAACGCCGCCCCATCGTCATGTTCACCAACGACGAC GACACTGGCCACGTGAAAGACGCTGTGGCGGCGGGCGTGTCGGCCTACAT CGTGGCGGGCTTGTCGCCAGAGCGCATTCGACCGATTCTGGATGTGGCGC TGGCACGCTTTCAGCACGAGCAGGCGTTGCTGCAAACGCTAGCCAGCACC CAAAGTGAGCGTGATGAACTCAGCGCTGAACTCAAAGACCGCAAGGTGAT TGACCGCGCCAAAGGTCTGCTGATGCAGCGCCAGGGCTTGAGTGAAGAAG ATGCCTTCAAAAAAATGCGAAAAACCGCCATGGACAAAGGCTTGAAGCTG GCCGATGTGGCGCAGCGCATGCTTGATGTGGCTGATTTGCTGGCCTGA >Rfer_2630 metal dependent phosphohydrolase ATGGACGAAGCCCAGTTCGAATTGATTGAAATCCATCAGTTGCGACCCGG CATGTTCATCGAGCTTGAGCTCGGCTGGATGTCCCATCCGTTTCCCACCA GAAGCTTCAAAATTTCCTCTGAGAAACAGCTTGAGGTGATTCGCGGCCTG GGTCTAAAACGTGTTCGTTATTTTCGTGACAAAAGCGATCTGCTGCCAGG ATTGGCAAATGCCGGTGGTGCCAAGGTCCTGGCGGGCGATAGCCCTGGCG AACAAGCCAGGCCGGAGAGCACGCTGGCGTCAACTGATGAGAATCGTCTT CGGCGACAACGCAGTGATTTGCTGAGCGCCCAACATAACAGTCTGATCGT CTGTGAACGCCGCTTTGTTGACGCCATTCAACACTACAAGCTGGCGGTAG AGCAAATCAGTGCATTCCCTGGCGCGGCCAAGCAACAGTGTCTTGGCGTG GTCGGCGGGTTTGTTGGCGATATGCTGCAGGAGGGCGAGTTGGCCATTCG CCTGTTGTCTGAGGGTATGGGGGACAAAGCGTCCATGCATCCGGTCAATG TGACCATTCTTTCTCTGCTGCTCGGCCGGTCTCTGGGCCTGTCACAGCCG GACATGCTTGATCTGGGCATGGCGGCGTTCTTGCATGACATCGGCAAATC CCGTTTGCCGGACCGGGTGCGCTGGCCAGACGAAAATTTTTCAAAAGCCG AATACAACTTGTACCAGGAGCATGTTGCCCAAGGTGTCCCTCTGGGTCGG CACATGGACTTGACAGCGGGCGCCTTGCAAGCCATCGCCCAGCATCACGA GGCGATGGATGGAAGCGGTTTCCCAGCCAGGCTCAAGGGTGACAGCTTGT CCGTGGCAAGCAAAATTTTGTCACTGGTGAACCAGTATGACAACTTGTGT AATCCGAGCCGGCCTTCGACTGCCGTCACCCCGCATGAAGCCCTGGCACT CATCTTTGCCCAGCTGAAAGCCCGTTTCGATAGCGTGACACTGGGCGCCT TTATCCGCATGATGGGGGTTTATCCGCCGGGCTCGGTGGTGCAATTGGCT GACGAACGATTTGCCCTCGTGGTATCGGTTAATTCCACCCGGCCACTTAA GCCCCAGGTGATCGTGCATGAGCCTCGTGTTCCCAAGCATGAGGCACTGA TTCTGGACTTGGAGCATGCACCCGCCCTGGGCATTCGGCGCAGTCTCAAG CCGGCGAGTTTGCCTCGGGAGGCCATGGATTACCTATTGCCGCGGCAGCG AATTTGTTATTTTTTTGAAAAAGTAATTGAGTCACCGTCAGACGAGGTGG GGCTGTGA >Rfer_2480 diguanylate cyclase with PAS/PAC sensor GTGAACAGCATCCTGATCAGCCCGAACATCAGACACCCTTACGGCCTTCT CCTGTTTGTGTTTCTGGTTGCTGCCGGTCTGGCGGGCAACTATTTCAGTT TTCCGGTTTTTCTCAATATTGATTTCCTGTTCGGCAGCATCTTTGCGATG CTGGCCCTCCAATACTTCGGGCTCGGTTGGGGCACACTGGCTGCCGCGCT GATCGGCAGCTACACCTACGTTCTGTGGAACCACCCTTACGCCATCATCA TCCTCGGCGCTGAGGCGCTGTGGGTTGGTGTTCTGATGACGCGGCGCCGG GTCGGCATGGTGCTGGCCGATACCTTGTTTTGGCTGCTGGTTGGCATGCC ACTGGTGTTCTTTTTTTACCGCCTGGTGATGCATGTGCCGCTCAGTAGCG TTACCTTCCTCATGACCAAGCAGGCCAGCAACGGCATGGCCAATGCCCTG CTGGCCCGGCTGATTTTTACCGGGTTGGTGCTCGGGTTTCGATCGTCGCA GACCTCATTTCGCGAGATCATCTACAACCTGCTGACCGCTTTTGTCGTGT TTCCGGGCTTGATCATGCTTGCGATTGGCAGCCGCGCTGATTTTGCTGAA ACCGACCACCGGATTCGGGCCTCATTGCTGCAAGACAGCGCCCGCCTGGA TCACTATGTGAACACATGGGTGATCAACAGGAAATCTGCCGTTCTCAAGC TGGCCGAGACGGCGGCCGTAAAGACGCCGCAGCAGATGCAAGCTCATCTG GAGCAGGCGCAGAAGTTGGATTCCAATTTTTTGCGCCTTGGGCTGATGGA CGCTCAGGCGACAACTACTGCCTACTATCCATTGCTTGATGAGTTAGGGC ACAGCACCATTGGAAAGAACTTCGCGGATGGACCGTTCATTCCAGACCTC AAGCGAACCCTTCAACCGATGGTCTCGGAGGCCATCATGGACAGGATCGG CATCGCCAGGCCCATGGTGGCGGCGCGAGCGCCCGTGCTCCTGGATGGGA AATACGGCGGCTATGTGACCGGCATACTGAGTCTGACGCAGATACGCGAG CAACTTGACAGCAGCACGGTGGGTCATGCGGTGCTCTACACCTTGCTGGA CAAAAAAAACCAGGTCATCATGAGCAATCGCAGCGACCAAACGGTCATGA CACCTTTTAAACGCGGCAGAGGCCAGCTCAGTCAACTCGATGCCGGCATC AGTCAGTGGGTGCCTTCAGTGGCTGCCAATACCTCAATCTCCGATCGTTG GCAAGAATCGGTTTATGTTGCTCAAACTGCCGTCGGTGATCTGGCCGAGT GGACATTGATCCTGGAGCAGCCGGTCGCGCCTTTCCAGAAAACGCTCTAC AAGAATTACAGCGACAAACTGACCCTGTTGTTTGTGATTTTGCTGGCGGC GTTGATACTGGCCGAAGTCCTGAGCCGCCAAATCATGGGCACGCTCGATG TTCTGGGTGCATTGACCCGCAACTTGCCGTTCAGGGTTGCAGCCAGCGAC AACGACATTGTGTGGCCTGAAACAGCGATCAAGGAGACCAATGATCTGAT TGGCAATTTCCGGGAGATGTCCAAACTGCTGAAGGCACAGTTTGATGAGA TTCAGGAGGTCAACGAAACGCTGGAGCAGCGAGTGGCAGATCAGACCGCA GAGTTGAAGGCGAGTGAATTGCACTTGCAGACCATCATCGAGAACGAACC CGATTGCATCAAAATTATTGATGCCCAGGGGCGCTTGCTGCACATGAATC CGGCCGGACTGGCGATGATCGAGGCCGACGCGCTGGCGCAGGTGGCAGGG CGCCCGGTGCTTGATCTCATCGCCCCCGAATACCGCGCTGCTTATTGGGA TTTGCATCAGCGTGTGCTGGCGGGTGCAAGGATGCAAATGCAGTTCGAGG TGATCGGTCTCAAGGGTGGCCGGCGCTGGCTGGAGACCCATGCAGTGCCC ATGCTCGACCATGCCGAGACGATGCAGCTGGCCGTCACCCACGACATTAC CGAGCGTAAACAGATGGAAGAGCAGGTGCGTCAACTCGCCTTCTATGACC CGCTGACCCTGCTGCCCAACCGTCGCCTGCTCACCGATCGCTTGGGCCAG GCCATGGCAGCCAGCAAGCGCAGTGCCTGCTATTGCGCGCTGATGATTCT GGACCTGGACAATTTCAAACCACTCAATGACACGCATGGGCACCTGTTGG GCGATTTGTTGTTGATTGAGGTGGCCAGGCGCCTGACCCATTGTGTGCGC GAGATCGACACCGTCGGGCGTTTCGGTGGCGACGAGTTTGTGGTGATGCT CAGTGAGTTGAGTACCGATCAGGCGCTATCGACCGCGCAGGCGCAAGCCG TTGCCGAGAAAATCCGCAGCAGCCTGTCTGAACCCTACCTGATCACGGTG CATCACGAGAGCCGCAGCGACACCTTGTTGACGCATTACTGCACGGCCAG CATCGGTGTGGTGATCTTCATGGACAACGAAACCCCGCAGGACGACATCC TCAAGTGGGCCGATGCGGCCATGTACCGGGCCAAGAAAGTTGGGCGCAAT ACAGTCAGGTTTTATGACTCAAAAGCCTGA >Rfer_2755 metal dependent phosphohydrolase ATGACTGATATCGCCACTGACCCCAAACACTTTACCAAGGCGGTCACCGA ACTCGGTGAAAAACGCCCAGTGGTGACGACACAAGCGATCTTCAATGATC GCGGCGTCAAGATCATTGAAAAAGGCGTTCAGGTCAATGCCGGGCTGTAC GAGCGGCTGATGGCACACAAGCTGACGGTGCCGATTGAACAATCCGTGGC CAGCACGCCCACCGTCACCGGACAGTTTTTACGCGTGCATGCCGAACAGG TGATGCGCGAAGTGCCTTTCTTTGAGCGTATCGGCGCCAACACGAAGACG CGTAGCCTGATGCTGGACGCGCTGACGAAGCTGCCATTGCCCAGCCCTAT TGCGTTTCAATTGACGCTGGCCTATGAGGTGCGCCCGGTGCTGTTTCGCC ACTCAATCTTTATGGCGCTCTTTGCCGCCTGGATGACGCAGGGCCTGATG GTGTCACGCTTTGACGTCAGCGTGGCGAGCGCCGCGGGATTGCTGCATGA CCTCGGTATGCTGCATCTCGACCCGCTCCTGCTCATGCCGCAGAGCGCCA TTGGTCACGATCAAACGCGACAGCTCTACTCACACCCACTGGTCTCTGAG GTGCTGATCGAGCGCCACCACGAATATCCGCGCGACCTGCTGCAAGCCAT CAAAGTGCACCATGAGTTCCTCGACGGATCAGGCTATCCTGGCAATCTCG CTGGCGAAGCGATCAGCCCCTTGGGTCGCGTTCTCTCGCTCGGTGAGCTG GTCACATCCATGTTGGCGTCCAACGAGGCGGCATCCGAGTTGCGGCTTTG GGTGCTGTTGCGCATGAACATGCATCGCTATGACGTGGCACTGGTCGAGC AGGTGATGCAAAACATAGAGCCACAAACTGAACTGCAGAGCAAGGGTCTG GCAGTGATGACTGATCCTGTGAGTCGCCTCGTGGAAATCGACGCAACCCT GTCCGAATGGCCGACCGAACTGACCCAGCGCGCGGACCTGAGTGCGCCGC GCCAGGCAAACCTGGCTGGACTGACGGAGCAGTCGGCACAACTGCGCCGC ACATTGGCCGGCGTCGGCGTGGCACCGCAGCAGTTGGCACAATTGGGTGA CGATACGCTGGACGATTTTCTTCAGTTGGAGTTGACACTGCTGGCACAGG AAGCCGCCTGGCAACTGCGATCGCTTGCGCGCCAGACCAGGCGGCGCTGG CACATTGAGGCCGATGCCCGTTTTCCGGATCAGCTGACAGCGTGGCTGGA CCGGGTGGACACAGTGGTGGCCGGTATCAACGGCATTGCGCCCGCGCAAC TGCACGACACGGAGTAG >Rfer_3250 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) ATGAGCTGGGCCCGCCTGAGCCGGCTGCCCCTGCTCATCCTGGTCGTCTC GCTTGGCGTGACCTGGCTGCTATGGAATCACGAGCGGCAAATCTCGCGCA ATCAGGTGCGCTCCCAGTTCGACTTTGCGCTGCGCGATGCAGTCAGCCGG GTTGAGCAGCGCATCGCCAGCTACGAGCAGATGTTGCGTGGCGTGCAAGG CCTGCTCGCGACCACCGATGCCGCAGACCGCGACAAGTTCCGCGACTACG TCAGCGCGCTTCAACTCGACGCCAACTTTTCCGGCATCCAGGCTATCGGT CTCGCCGAGTGGGTGGCGGCGTCAGGCAAAGACGCCCACCTGGCCGCCAT GCGCCGGCTCGGCTTCGCTGACTACGCCATTTACCCCCTGGGTGAGCGCG AAAATTACGCCCCGATCATCCAGCGCGAGCCCTATACGGGCAACAACCGC ATCCCCACCGGCTTTGACCCGTGGTCGGAACCGGTGCGGCGACTGGCGAT GGAGAAGGCGAGGGACTCTGGCATGGCGGCGATATCCGGCAAGGTCCGCC TGACCGTGGACAGCCAGCCAGATGCACTACCCGGCTTCATCATGTTTCTG CCGGTTTATGCGCGCGCTCAGCCACATGACAGCGTGGCGCTTCGCCAAGC CCACCTGAGCGCTTGGGTCTACGCCTCGTTCCGCATGAACGACCTGATGG CCAGCCTGTATGGCGAACAGCCGCCCGGTCTCTCAGTCGCCATTTACGAT GGCGTCGAACCATCAGCGAGCACGCTGCTCTATTCAACCTCGGGTGACGC GGCGAAACCGCGCCGTGCCGCCATGGCAGCCGATGAGTACCTGGTCGTCG CGGGGCGCACCTGGACGCTCTCCATGAGCGCCAAGGACGAGTTCAAGGAC AGCGTCGGCAGCAGTGCTGAGTCGCTGATCGCAGTCGCCGGCACGGGCTT GAGCTTGTTGCTGGCCTTGCTCGCGTGGCTCATGGCAACCGGGCGCGACC GTGCCGTCCGTCTCGCTGCCACCATGACCAGGGAACTGCGCGAGAGTGAA GAAAAGTTCCGCGCCATCGCCGACTGCACCGTCAACCTGGAAGTCTGGTG GGGGCTCGACGGCCGGCCACGCTGGATCAACCCCTCGGTCAAGGACTACA GCGGCTATACCGTGCAGGAGTGCCTGGCCATGCCCGACTTCGCTGGTACG CTGATTCATCCTGAAGACATGCCGCGTGTTGCACCCGAGTTGCAGAAGGG GCTGCAGGGCCTGCGGGGCGACGACCTGGAATTCCGGTGTGTCCGCAAGG ATGGCTCCGTGTTCTGGCTGTCCGCGTCCTGGGTCCCCATCCAAGACGCC AAAGGGGTCTTCACGGGCTTTCGCACCAGCGGACGCGACGTCACCGACCG CAAACAGGCCGAGGCCGAACTGCGCATCGCCGCTGTCGCCTTCGACTCGC TGGAGGGCATGATGATGACCGATGCCAGCAGCGTGATCCTGCGGGTCAAC AAGGCATTCACCGAGATCACGGGTTACTCGGCCGAGGAAGCCGTGGGTCA GACGCCACGGCTGATTCAATCGGGCCGTCACGGCGAGGACTTTTATCGCG CCATGTGGGACGACATCCGCCGCAAGGGCGGCTGGCAGGGCGAAGTCTGG AACCGGCGCAAGAGTGGCGAGGTCTATCCGCAATTGCTCAGCATCTCGGT GGTGAAGGATGCCGATGGCACCGTGACCCATTACATCGCCGCGCACCATG ATATTTCGGAGCGCAAGAACGCAGAGGAAAGGATCAAGGAGTTGGCTTTT TTTGACCAGCTCACGGGTCTGGCCAATCGAACGCTCTTGCTCGATCGCGC CGTACAGACCATGGCCGCGAGTTCGCGTGACGGCAGTTTCGGCGCGCTGA TGTTCATTGACCTCGACAATTTCAAGATGCTCAACGACACACTGGGCCAT GACATGGGGGACATCTTGCTCAAGCAGGTGGCGCAGCGTCTGAACACCTG TGTGCGGGACGGCGACACCGTCGCCCGGCTCGGCGGGGATGAATTCGTCG TCAAGCTGGCAGGTCTGGGCACAGTGGCGGGAGAGGCCGCGGTCAGTGCC GAAACCGTTGCAGACAAGATTCTCACCGCCCTCAACCAGACCTACCAGCT GGGCAGTGTGGCCTACCACAGCACACCGAGCATTGGTGTGACGCTGTTCA AAGGGCAGAGCGTCGCGATCGAGGAGTTGATGAAGCAGGCTGATCTTGCC ATGTACCGGGCCAAGGCCGCCAGTCGCAATACGGTTCGCTTCTTTGATCC GGCCATGGAATCCGTCATGATGGTGCGTGCCGCGCTGGAGCGCGATCTGC GTCAGGCCCTGGAGGAGCATCAGTTCGTGCTCCATTACCAGGCCCAGGTC GCGGGGGATTACCACTTGACAGGTGCCGAAGTCTTGGTGCGCTGGCAGCA TCCCCAGCGCGGCATGGTGTGGCCCGATGACTTCATTCCTGCCGCCGAAG AAACCGGCTTGATTTTGCCTTTGGGCCACTGGGTACTGCAAACTGCCTGC ACCCAGCTGACGATCTGGGCGGCGCGGCCCGAGACGGCCGATCTCACGGT GGCGGTGAATGTCAGCGCTCAGCAGTTCCGCCAGCCCGACTTCGTGGCCC AGGTGCTGGCGGTCCTCGCTGCGACCGGGGCCAACCCGCAGCGCCTCAAG CTGGAGCTGACTGAAAGCCTGCTGGTGTCGAATGTGCAAGACCTGATCGA GAAAATGGCGGCGTTGAAAGCCAAGGGCGTGGGCTTCTCGCTGGACGACT TCGGCACCGGCTTTTCCTCGCTGTCTTACCTGAAGCGGCTGCCGCTGGAT CAGCTCAAGATTGACAAGTCCTTTGTGCGTGACGTGCTCACCGATCCCAA TGACGCCGCCATTGCCAAGACCATCATTGCGCTGGCCCAGAGCCTGGCGC TGGGCGTCATCGCAGAAGGGGTGGAAACGTCAGCGCAACGGGACTTCCTG GCCCAGGCAGGCTGCCAGGCCTATCAGGGCTATTTCTTCAGCCGACCGGT GCCGCTCGAAGATTTCGAGCAGCTTTGCGCAGCGGGCTTGCGTGCGCCGG CAGGCGTCTGA >Rfer_0116 diguanylate cyclase ATGAAATCCTCGCGCAATCCTAACAAGTCCCTGTGGCTGGTGTTGCTGGC CCTGATGTTGGCGTTCGTGTTTGAAACGGCGGCGTGGTGGTGGGCCAGCC AGACACCGCGCGCCTCGTCGCTGCAGGGGCCGATCTGGCTCGGACTGGGC GCAGCACTGTGTGGGCTGGCAGCCGCCGTCTTGCTGTGGCGCCAACTACG GACCGCGACGCGTGCAACTCGACGAGCCCGCCAATTGCTGGCCTCCAGCC TGGACACGCTGGACGTGGGCCTGGAGATTTGGGACGAGCACGACCGACTG GTGCTCTACAACAAAAAAATCAACCTGATCTACAAGGGCTTCCACACGCC AGCAGACATCGGTCAGACCTTTGAAGCCCTGATGCGCGCCAAGCTGAAAC GACAGGCGATCCCGGCGGCCATCGGCTGCGAGCAAGAGTGGCTGGCCCAG CGTCTGGCGTCGCGTGGGACGCACAAGGCGCACACCTTGAAAGAACTCAC GCGCAACCAGTGGGTCAATTTCTACGAAACCCGAACATCCGAGGGCTATC TGGTGGCTGCCTGGGTCGACGTCACGGAACTGGTCCTCAAAGGCAAGGTG CTGGAGGCCAACAACCAGCGCCTGGCCCAACAAACCGCCATGGACGGCTT GACCGGTCTGGCCAACCGCAGGCGTTTTGACGAAGCCCTGACCGTCGAAT GGCAGCGTGCCGCTCGCGGCCGCACGCCTTTGAGCCTCTTGATGGTGGAT ATTGATCACTTCAAGAATTACAACGACAACTATGGGCATCTGGCCGGCGA CCAGTGCCTGCGGCGGGTGTCCAGCGTGCTCAGCCGTTGCGTGCGCCGGG CTGGCGAACTGGTCGCGCGCTACGGCGGTGAGGAATTTGTGCTGTTACTG CCCGGCGCCGACATGGCCCATGCTTGCGAGATCGCCCAAATGTGCCTGGA CCTGATGCAGCAGGAGTGTGTGGCGCACGCCGCCTCACCCACCTCGGTGT ATGTCACGTTGAGCATAGGCGTGGCGTGTGCGCTGCCTGACGCCATGCTG GACGACCCCGCTTCCCTGGTCAATGCGGCCGACGCCGCCATGTACCGTGC CAAGTCCAGCGGGCGAGCGCACTACGAAGTGGCTGACCAGGCCGACTGGG AGATCGACGACAACACACCTCGAACCCAGCCGTCCTCCTTGTCCTGA >Rfer_2994 SOS-response transcriptional repressor, LexA ATGCTTGGAAGCCCTAAACTCACTGCCCGCCAGCAACAAATTCTGGACCT GATCCAGAACGCCATTACCCTCACTGGCTCGCCACCGACCCGGGCCGAGA TCGCCACCGAGCTCGGTTTCAGGTCTGCCAACGCCGCCGAGGAACACTTG CAGGCGCTGGCGCGCAAAGGCGCCATCGAACTCGTCAGCGGCACCTCGCG CGGTATTCGCCTCAAGAGCGAGGCACTGCGCTCCATCAACGAATCCCGCA GCAAACAATTTCCCCTGTCGCTGCCCGGCCTGTCACAACTGATGCTGCCC CTGATTGGCCGCGTGGCAGCGGGCTCGCCGATTCTCGCGCAAGAACATAT CGACCAAACCTATTACGTCGAAAGCAGCCTGTTCCAGCGCAAACCCGACT ACCTGCTCAAGGTGCGCGGCATGTCGATGCGCGACGCCGGCATCATGGAC GGCGACCTGCTGGCCGTGCAATCCACGCGGGACGCCAAAAACGGCCAGAT TGTGGTGGCACGCCTGGGTGATGAAGTCACCGTCAAGCGCTTTCGGCGCA CCAAGGACCTGATCGAACTGTGCCCGGAAAACCCCGACTACCAGATCATC GTCGTCGAACCCGGCGAGCCCTTCGAGATTGAAGGGCTGGCAGTTGGCTT GATCCGCAACACCATGTTGATGTGA >Rfer_1872 response regulator receiver domain protein ATGCAACAGCTAAAGACTTACATCGTCGAAGACAACCCGGTCATCCGCGA GAGCCTGATCGTCACTCTGGAAGAGCTGGCACCTGTCAAGGTGGTGGGCA CTGCCGTCGATGAATTCACGGCGGTGCAGTGGATGTCGCAGCCAGGCAAT CAGGCCGACCTGGTGATTGTTGATATTTTTCTGAAGGCCGGTTCCGGCCT GGGTGTGCTCAGGGCAGCGAGTGGGTTAACGCCGCGGCAGAGATTGGTGG TACTGAGCAACTATGCCACGGCGGATATTCGGCGCAAATGCCTTGAACTC GGTGCCGACCGGGTTTTTGACAAGTCCAACGAGATCGATGCGCTTATCGA GTACTGCGCTCAGCTGCCAGTGGATCCAGGTGACGGCAGCAGCCAACCGG GTCCCGGAACGTCGGCCTGA >Rfer_2220 diguanylate cyclase/phosphodiesterase ATGACCCGTGTGCCTGGATATCTTTACAAGGTGGCAGCCCACCTGCTCCA TGCCACTTTCCACGCATCCCTGCGCCGCCCCTTGAAGTGGCTTAGGGTGC AAGGTCTGCGCGAGAAAGTAACGCTGAATGCCGTACCCGATGGTGTTTTA CGCATTGTCTGCGTCCACGACCTGAGCGAGCGCAAGAAATTTGAAGAGTC GCTGCGCTACCAAGCCACCCATGATGAGCTCACCGGTCTGCCGAATCGCT GGTTGTTTCACCTGCACCTGAGTCAAGCCCTGGTGCGTGCCCGGCGCACA GGTCTGAGAGTGGCGGTTTTGTTTCTGGATTTGGACTACTTCAGAAGTGT CAACGACAGTTTTGGGCACACTACCGGAGACGCCCTGCTGGTGCAAGTCG GCACTCGTATCCGCAGCACCCTGCGCGAAAACGACACGCTGGCCCGCCTG GGCGGCGACGAGTTCGCCATTCTGCTCGCCGATATGAAAAATGTGGATGA AGCGGTGCGTGTGGCCAGCAAGCTCCTGCTGTCGCTGCAGGCCTCGTACC GGCTGCAAGACCAGGATGTCTATTCCGGCGGCAGTCTGGGTCTGGCTTTT TATCCGGATGATGCGCAGGACAGTGACACCCTGCTGCGCTACGCTGACAT GGCCATGTACCAGGCCAAACAGGCCGGGCGCGGAGGCTATGCCTGCTATT CGCAGGAAATGGACCTGCGCGGGCACGAAAACATGCGGCTGCATACACGG CTGAAAGAAGCCATGGCCCAAGGAATTTTGCAGTTGCATTACCAGCCGCA GGTGGATGTGGAAAGTGGTGCGATCGTGGGGGCAGAAGCCTTGTTGCGCT GGCACGACCCGGAGCTGGGCCATGTATCTCCGGCAAGGTTCATACCGGTT GCCGAGGCCACCGGCCTGATTTTGCCTTTGTCGGACTGGGTGCTGGAGAC GGCGTGCCAGCAAATTGCCGCCTGGACTCAGGCCGGCACGCCATTACGGG TGGCCGTCAATGTTTCGGCGCAGCAATTTCGCCAGCGCAATCTGCCCGAG CAGGTACGCGCAGCACTGGCGCGCACCGGTGCGCAGGCCCAATGGCTGGA CATTGAAATCACCGAGTCGGTGGCCATGACGCAGCCCGCGCAGGCGCGTG AACAGCTCGATGCCCTGGTGGGCTTGGGCTGCCGCATCGCCCTGGATGAC TTTGGTACCGGCTATTCGTCGCTCGCCTATCTCAAGGCCCTGCCGGTGAG CAAGCTCAAAATTGACAAGAGTTTCATGGACGGCATTCCCCAGGACGCCA ATGACGTCGCCATTTCCCGGGCCATCATTGCCTTGGCCAAAAGTCTGGGG TTGACACTGGTCGCCGAGGGGGTGGAAACCGATGCCCAGCTGGCCTTTTT GCGCCAATACGGTTGCGAGGTTTACCAGGGCTGGCTGTTTGCCAAAGCGA TGACGGTGCAGGAGTTGACGTCACGCCTTCACGGCGTTCAAGTTCCCTGA >Rfer_0055 metal dependent phosphohydrolase ATGACCCGACCCGACCCCAGCCCGCCGCCCGCCGCTGATCCCATGTATGC CGCCATGGCGGTAGCGGCTTTCGCTATCGTCACACTGGCCGGAACGCGCA GCTCGGACACCGGCCAGCACATTTTGCGGGTGCAACAGTACGTCCAGGCA CTGGTGCAGCGTCTGAAGGAACATCCGCGCTTTGCTGCGGCCTTGACCGA GTCCTATTGCCGGGTTCTGTTTCAGTCGGCGCTGTTGCACGATATGGGCA CGATTGGCATTCCGGACCGGATTTTGCTCAAGCCCGCCGCCCTCACACCC GCTGAGTACGAGATCATCAAATCCCACACTACCCTGGCGCGTGACGCGAT TGAACAGGCCGAGTTGACCCTGGGCTACCAGGCGCCCCTGCTTCAGACGG TCAAGGAACTGGCTTATTCCCATCATGAAAAATGGGACGGCAGCGGTTAT CCACAGGGTTTGTCGGAGGAGAATATCCCGCTGTCGGCGCGCCTCATGGC GATTGCCGATGTCTACGATGCCCTGATCTCGGAGCGCGTGTACCGGGCCG GTCTGCCCCATGATCAGGCGGTGGGCATTATCTTTCAGGGCCGCGCCAGT CATTTTGACCCCGACATGGTGGATGTTTTCATCGAAATTCAGGATGAATT CCGGGCCATCGCGCTGCGCTTTGCCGATACCGGGCAGGATATGCAAAGGA AGATGGCTTATATGGCCAATGCCATTGCGGAAGAAGTCCAGTTGTAA >Rfer_2337 diguanylate cyclase with PAS/PAC sensor ATGTCCATCCGTCAAAACTCTCACCCCCCAACGCAATCCGATGGTCAAGA TTCCTTCGCCAAGGCCGAGCACATGATGGCCATTGCCATGGACAAGGGTT TGCACCGGTTTGAATGGATACACACCAGGGCCGACGGCACGAACTTCGTC GCCGAGGTCACGCTCTCGATCGTCGAACTGGAAAGCAGGCCCGTCATCTA TTGTGTCTGGCGCGACATCACTGAACGTAAGCGCATCGAAGAGACACTGC AACGGCAGAACTACATACTGTCCGCCGTCATCGAAAACTTCCCAGGCGGC ATCTCACTGTTCGACGCTGAGCTGCGCCTGGCGGCGCACAACGACCAGTT CAAGCAGTTGCTCGATCTTCCCGATTCGCTGCTCGGCAATCCCGGGGTGG GTTTCGAAGACATCGCTCGCTACAACACGGGTCGCGGCGAGTACGGCCCC GGTGACCCCAAGCAGCAGATCGCAGCCATCGTTGCCCGGGCAAGCCACTT TCAGGCCCACAAATTCGAGCGAGTTCGCCCCAACGGAACGGTGCTGGAGA TCCGTGGCATGCCCCTGCCAGACGGCGGTTTCGTCAGCACCTACATGGAT ATCAGCGAGCGCAAGCTGGCCGACTCGCAGCAACGTATTGCCGCCACTGC CTTTGAATCTCAGGAGGGCATGTTCATCACCGATGCGGCCGGCACGATCC TGCGCGTCAACCGGGCCTTCACGGACATTACCGGCTATACGGCCGAAGCG GCCGTGGGTCAGAATTCGCGCCTGCTCAAATCTGGCAGACACGACACAGC CTTTTATGCTGCCATGATGGACAGCCTGCGATGTAGCGGCAGATGGCAGG GAGGACTCTGGAATCGGCGCAGGAACGGCGAGGTCTACCCCGAATGGCTC AGGATCACCGCGGTCAAGGGCGACGCGGGAGAAATCACCAACTACGTTGC CACCTTAACCGACATCACCGTGCGCAAGCGGGCGCAAGACGAAATCAGGA ATCTGGCGTTTCATGACGCGCTGACTCAACTGCCGAACCGTCGTCTTCTC AGCGACCGCCTGAGCCAGGCCCTGGCAGCGAGCAAGCGCAGTGCCTGTTA TGGCGCATTGATGTTTCTTGGTTTGGACAACGTCAAGCCGCTCAATGACA CGCACGGGCATGAGGTGGGCGATTTGCTGCTGGTTGAGGCGGCGGATCGA CTCACGCGGTGTGTACGTGAAATAGACACTGTTGCGCGCTTCGGCGGCGA TGAGTTTGTGGTGATGTTGGTCGATTTGGAGGTGAATCTGCCGCAAGCGG CCCTGCAGGCCCGGTGTATTGCTGAAAAAGTCCGCGTTGCATTGGCTCCG CCCTATCTGCTGACTCTCAATCACGGGTCGAACACCAACACCACCGTTGA GCATCATTGCACGGTGAACATCGGTGTGGCGTTGTTCATGGACCACAAAG GCAGCACAGACGACTTCCTGAAGTGGGCTGATATCGCAATATACAAAGCC AAAGAAGCGGGGCGCAATGCCGCTGCGTTCCATGACTGCGACGCATGA >Rfer_3013 MCP methyltransferase, CheR-type TTGAACAGAAACGGCTTAGCGCCCAGGGAGCGACCTTTCTCCATCGTCGG TATCGGCGCCTCGGCCGGGGGTCTGGTGGCGCTGGAGCAATTTTTTTCGC AGGTGCCGCCTGACAGTGGCTTGGCCTATGTGATCGTGCAGCATCTGGAC CCCAAGCGCGAAGGCATGCTGGTGGAGTTGCTGCAACGTCATACCCCGCT GCCGGTGGCCGAGGTGCAGGACCAGACGCTGGTCGAGCCCAACCATGTTT ACGTTATTCCACCGGGGCGAGACCTGTCCTTGCTCAAGGGCGTGTTGCAC TTGATGGTGCCACCCGAGCTGCGCGGTCTGCGCCTGCCGATTGATTTCTT TTTCAAGTCGCTGGCCGATGACCAGCAGCAAAACAGCATCGGCGTCATCC TCTCCGGCATGGGTTCAGACGGCACCCAGGGCCTGCGCGCCATCCGCCAG GCCGCTGGCGCGTGCTTTGTGCAAACGCCCGCGAGCGCCCAGTTTGATAG CATGCCGCGCAGTGCACTGGATGCCGGTGTGGCCGATGTGGTGGCCCCGG CCGAGGAGTTGCCGCTCAAAATAATGGCCTATGCGGGGCGCAGTCAGCTT GCCGTCGCAGCCGACGTCCGGCTTCAATCGGATCAAAAGGACGACGGTTT TCTCGATAAAGTGATTGTGTTGCTGCGCAACCAGACCGGGCACGATTTTT CGTTTTACAAAAGATCTACCATTTTGCGGCGTGTTGAGCGCCGCATGGGC CTGCATCAACTGCCGCACGTCTCCGAGTACCTGCGCTATTTGCGTGAAAA CCCGGACGAGTCCGAGCTGTTGTTTAATGAGTTGCTGATTGGGGTGACCA GTTTCTTTCGCGACTCTTCGGTATGGAATCAGCTCAAAAACGAGGTCCTG CCAGTGCTGCTCGCCAGGCACCCGCAGGGTGCCGCACTGCGCGCCTGGGT GCCCGGCTGCTCGACCGGCGAAGAGGCGTATTCGCTGGCCATGGTTTTCA AGGAGGCGCTGGAGTTAGCCAAGCCAGAGCCGCGCTTTACGCTTCAGATT TTTGCCTCTGATCTGGACCGCGACGCCATTGCCACGGCACGCAACGGCAT CTACCCGCGTTCTATTGCCGCCGATGTGTCGGAAGAACGTCTAGCCCGTT TTTTTGTGGAGGACGCTGCCGGCTACCGGATCAACAATGAAATTCGCGAG ATGGTGATCTTTGCCGAGCACAACCTCGTTGTCGATCCACCCTTCACAAA ACTCGACCTGTTGAGTTGCCGCAACCTGCTGATCTACCTGGAAGCCGAGT TGCAGGCGACGCTGATGCAGTTGTTTCATTACAGCCTCGGTGCGGGCGGT TTCTTGCTGCTGGGTAGCGCCGAGTCGATTGGTGCCGCCACTGAATTATT TGCCCCCTTGCCGGGCAAATCACGGCTTTACCGACGCCTGGACGCGCCGG ATCGGGCGCTGCGAGTCGGTGTTCCGGCGGCGTTTATGCAGGCGCATGGC AAGTCGGGGGCGGGCGCAGCCGCATTGACGAGCGACGGCTCGGCGACCAC GCCCAGCCTGAAGGTCCTGGTGGAAACGCTGGTATTGCAGCGTTACGCGC CAGCGGCGGTGCTCGTGACAGAAAAGGGAGACGCGCTTTATTTCAGCGGC AAAACCGGTGGCTATCTGGAGCCCGCTGCGGGCAAGCCCAGCCTGAATCT GTTCGCCATGGCGCGCGACGGGCTCAACCAGGCGTTGAGCGAAGCATTTC ACCGGGCGCTACGTGACAAAACCCTGGCCACGCGCAAAAATATCAAAATT AACAGCGAGACCGGGGTGCAGTATGTTGATGTCATCGTCCAGCCCTTGCA GGAGCCAGCAGCCCTGCGCGGGCTGGCGCTGATTGTTTTCTTTGACGTCC CCAAGCCCCGCCACCGCCTCTCCCAAGCCAAAGGCGTCGACCTGGCCATT GACGGCACCCAGGTCGAAACCCTGTTGCAGGCGCTACGGCAGTCGCGCGA GGATGCCAAATCAATGCGCGAAGAAATGCAAACCACGCAGGAAGAGCTGA GATCAAGCAACGAAGAGTTGCAGTCGCTGAACGAAGAGTTGCAGTCCGCC AACGAGGAACTGACCACCTCCAAGGAGGAGATGCAATCGATGAACGAAGA ACTGCAGACGGTCAACTATGAATTGCAGGCCAAAGTGGCCGACCTGGCGC GCGCCAGCAACGACATGAAAAACCTGCTCGACAGCACTGAAATTGCCACT TTGTTTCTGGACGATGCGCTCCATGTGCGGCGCTTTACGCCACAAACCAC TCGCGTCATCAAGCTCATTCCGGGCGACATGGGACGACCCATCACCGACA TCGTCTCTGACCTGGTCTACCCCGAACTGGTGCAGGACGCCCATGACGTC TTGCGTACGCTGGTTTTTTGTGAAAAGGATGTACCCACGGTCGATGACCG CTGGTACAAGGTGCGCACCATGCCTTATCGCACGCAGGAGAACCGGATTG ACGGCTTGGTGATCACCTTTTCGGATATTTCCAAGAGCAAAAAGCTTGAA GCCGAGTTGCGGGCCACGCAAGCCCGGCTGGCGGCGCAGCCTGACAACTC GAAACCACAGGGGAATGGTGATGGGATTTCGTAG >Rfer_1666 UspA ATGAAAATATTATTGCCCGTGGATGGCTCCACTGTCGCGTTGGACGCTGT TCGCTTTGCCATTCGCATGGCGCAAGACGGCCTGGAGAGCAGCATGGTGT TGGCCAATGTTCAGGAATCTGCCACTTTGTATGAGTTGATGGTGGCGCAC GATCCACAAGTGATTGAAGAGGTCAGCGCCGCGGCTGGCGCTCATACGCT GGCGGCGGCCGAGGCGCTACTGCAGGAGGCCAACATTCCCTACGAGTCTG AAGTGGCCTCAGGTGATCCAGCCCATACCCTGATTGATATTCTGGAGCGT TTTGGATGCGATCTGGTGGTGATGGGTGCCAGCGGCATGAGTCCCTTGCG CAGTGCCTTGCTGGGATCGGTATCCAATGAAGTGCTGCACGCCGCGAATG TGCCGGTCATGATTATCAAGGCGGCGCAAGCACCGGATGTTGATGAGGCT GACCTTGATGAGGTTCAATGA >Rfer_3453 two component, sigma54 specific, transcriptional regulator, Fis family ATGACTGAAATCTTCCAGGTACTGGTGGTCGAGGACGACCCGGACGTCCG CCTGGGCTGCGAACAGGCCCTGCAGCTGGAAGACATTCCGGCCAGCGGCC TGGACAGCGCCGAAAAGGCCCTGCGCCGCGTCACGCGCGATTTTCCCGGC GTGGTCGTGAGCGACATCCGACTGCCGGGTATGGACGGCATGGCCCTACT CAAGGAACTGCGGGCCATTGACCCGGATCTGCCGGTCGTGCTGATTACCG GCCACGGCGACGTGTCCCTGGCGGTCCAGGCCATGAAGGACGGCGCCCAC GACTTTATCGAAAAGCCCTTCTCCCCGGACTACCTGGTGGAAGTGGTGCG CCGGGCCCTAGACAAACGCCGCCTGACCCTGGAAGTGCGTCAACTGCGCG CCCGTCTGAGCAACCGAGACCAACTTGAAGCCAAGCTCCTCGGCCGCTCG CCGGCCATGGCCCGGGTGCGGCAACTGGTGGCTGACCTAGGCAACAGCGC TGCCGACATTCTCATCCAGGGTGAAACTGGCACCGGCAAGGAACTGGTGG CCCGCTGCCTGCACGAAGCCGGGCCGAGTCGCTCCGGCCACTTCGTCGCC ATCAACTGCGGCGGCCTGCCAGAGACCCTGTTCGAAAGCGAAATATTTGG CCACGAGGCAGGGGCTTATACCGGTGCCGGCAAGCGCCGAATTGGAAAGA TCGAGTACGCTAGCGGTGGCACCTTGTTGCTCGACGAAATCGAGTCGATG CCTCTCAGCATGCAGATCAAGCTCCTGCGGGTGCTGCAGGAACGCAGCCT GGAACGGCTGGGCTCCAACTCCCCCATCCCGGTGAACTGCCGGGTTATCG CCGCAACCAAGGTGGACCTGAAGGAGCTATCGGACCAAGGCCGCTTCCGC GCCGACCTCTACTACCGGCTCAATGCCGTCACTTTACAGCTGCCGCCCCT GCGCGAGCGGCGGGAAGATATTCCCCTCATGTTCGAGCACTTCCTGCTGC AAGGTGCTGCCCGTCATCAGAGACCGGTGTCTGCAGCCGAGCCACCCCGT CAGGGCCGCCTGATGGCTTACGACTGGCCAGGCAATGTGCGGGAACTGCG AAACGTGGCCGACCGCTGGGTGCTGGGTATTGAGCTCGGTTTCCCGCCCT TCGCAGCCGAGGTTTCCGCCGGTCCCCGGCAACTGGCGGAGACCGTGGAA GCCTTCGAGAGCGCGCTCATTGCGGAAGCCCTGAGCCGAAACGGAGGTAG CCTGGCGCGTACTGCCGAAGCCGTGGGTATGGCCAAGACCACGCTGCACG ACAAAATCAGAAAGTACCGTTTAGGGAAGTTGAATTGA >Rfer_3372 putative signal transduction histidine kinase ATGCGCTGCTCCATGACGCATTGCTGCCTTTTAAAACGTTTGCTTCTTTG CTGTTGCGCGCTGGTGCTTGCCGGTCTGGCCTTGTCGGCGCAGGCCCTGA CGCTGGAGTTGCGCCAGGCGCAGGCGCTGGTGACGGTGCAGGGTCAGACC ACGCGCGAGACGGTCAGCCTGCCCTACCATTGGGACCGCCATCACGTGGG TTTGGCCGGCGAGGCGACTTTTGAGCTGCCGTTCGAGCTGGCAGAGGTGC CGACGGTGCCCTTCGGCCTGTACCTGCCCCGGCTCGGCAATGCCTATGAA ATCTGGCTCAACGGCATCCTGCTGCAGCAAAACGGCGACTTGCTGCATGA CAACGGCCCGGACTTTGCCAAGGCGCCGCGCCATATCTTGATTTCGCCCG GCCTGCTGCGCACCCACAACCTTTTTCGTGTGCAGATCCGGGCCGATGTG GGCCGCCGTGGCGGTCTGGCCCCGCTGACCCTGGGGCCGGACGAGGAGGT CTATCCGCTCTACCTGCACGACTACCGCTGGCGCAGCACGGGCTCGTTCA TCGTGGTCATCGTCAGCCTGCTGATCGGTCTGGCGGCGTTCGTCTTGTGG GCGACCCAGGTCGATGCCGCCGGGCCGGGACGTCCCCGGCGCGACCCGCT GTACCTGTACGCGGGTGTGGCCGAATTGTGCTGGACGGTCGCCGTCAGCG ACGCCATCATCGAACACCCACCTTTTCTCTGGCCGTGGTGGGGCATGGTG GTACTGGCGGCGTCGACGGTGTGGGTGGGCAGCATGATATTGTTTTGCGC CGAGGTGGCCGGCTGGAGCCGTCTGCGGGCAGTCGGCTGGCTGCGCTGCT GGCTGGCGGTGTTGTTGATGGCGAGTTTTGCCGCTGGCACGACCTCGCTG GTGTATGGCTATCCGCTCGCGATGACGCTTTTGTACGCGGCCTTGGGACT CACCTCTCTGATCTTCGTCGCGACGTTCATCTGGAAGGCGGCGCGCGGTG CCTCGCTGCCGCACAAGATCGTGGCGGCCGCGGTGTTGTGGAACACGCTG GTGGGCTTGCGCGACCTGTATGTTTTTCGCATTAGCCAGGTCTACGGCGG CAACACCTTGCTGCGGTACAGCTCGGTGCTGTTCGGCCTGGCGCTGCTCT ACATCGTGATCATGCGCTTTCGCGTGGCCAGCGCGCAGGCGCGCGACCTC AACGCCAATCTGGCGGCGCGCGTGGCGCAAAAGGAGCAGGAGCTGGCGCA GAGCTACCGGCGCGTGGAGCAGCTCGCCCGCGAGCAGGAGCGTGCCGCCG AACGCACGCGTATTTTGCGTGACATGCACGATGGCGTGGGCGCCCACATC AGCACGGCCATCCGCCAGATGGAATCCGGACAGGCCAGCCATGCGGAGGT GCTGCAGACGCTACGCGACTCGCTGGACCAGCTCAAGCTGTCGATTGACG CGATGAACCTCTCGCCGGGTGACATCACGGCCTTGCTGGCCAACCTGCGC TACCGGCTGGAGCCGCGCTTTAAAGCGTCCGACATCGAGCTGCAATGGGA TGTGGACCTGATTTTGCCGCTGGCCCGGCTCGATCACGCGGCCATGCGAC AGCTGCAGTACATGGTTTTTGAGTCGCTATCCAATGTGCTGCAGCATGCG CACGCCACTCGGTTGCGCATCGAGTTGCGCAGCACAGCGCAGGGTGGCGC GCAGTTGCGGGTGATTGACAACGGCTGCGGCTTCGAGCCCGAGCGCGTGA AGCGCCGGGGCCTGAGCTCGCTGCGCGAGCGGGCCGCCGCCATCGCCGCG AGCCTGCTGATCACCAGCGTTCCGGGAAATACCGTGGTGGAAATCGAGCT GAATTGA >Rfer_2071 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA ATGAAAACCCTGTCCGCCGAGCCAACGGGCGCGGCATCTTTGGCGCAGCC CTTGCCGCAGTTGCTGACCGCCACGGCGCAGACTTTGCCGGAGCAGTCCC ATGCGCTGGCGCGTGCTCGCGCGTTTGCCGAGCCGCTGCTGGCCAGCGAG ACGCTCGACACCGGCGAGAACACGCTGGCCCATGCCGACGCGGTCGCGGC CATTCTCAGGATTATTGGCGGTTCCGAGGCGATGCAGGCCGCCAGTTACC TGGTTTATGCCTGCGACCACTTGAACAAACCCCAAGAGGTGATCGCCAAG GCGTTTGGTGACAACTTTGCCGCGCTGGCGGTAGAAACCACCAAGCTGGT GCGGGTGCAACGCCAGGCGCGCCAGGCGCAAGTGGCCAGCGAGCGCGCCG CCACGGGCATCCCGATGGCGCAAACAGCGGCCGCCCAAACCGAGAATGTG CGCAAGATGCTGCTCGCCTTTTCACGCGACTTGCGCGTGGTGATGCTGCG GCTGGCCTCGCGCCTGCAGACTTTGCGCTTTTTTGCCGCTGCCCGCCAGG CCGCGCCGCCCGGTGTGGCGCGCGAGGCCTTGCAGGTGTTTGCGCCGCTG GCCAACCGGCTGGGCATATGGGAAATCAAGTGGGAGATGGAAGACCTGGC GTTTCGTTTCCTGGAGCCTGATGTCTACCGCCAAGTGGCGCGTCTGCTCG ATGAAAAGCGCTCCGAGCGCGAGTTGCACGTTGAGCAATTGCGGCAACAA CTGGAGTCGGACCTGAAGGCGCAGGGCATGAGCGTCACGGTGCAGGGGCG ACCCAAACACATCTTTAGCATCGTCAAGAAGATGCGCGGCAAATCGCTTG CATTTGACCAGGTCCATGACATTCGGGCGCTGCGCATTGTGGTTGCAGAC ATTGCGGACTGCTACGCCGCCTTGAGCTGGGTACACAGCCAGTTCACACC GATCGCCGAAGAATTTGACGACTACATTGCCAAACCCAAGGCCAACGGCT ACCAGTCCTTGCACACAGTGGTGCGCGATGCGGCGGGGCTGCCGATCGAG ATCCAGATTCGCACCCAGGCCATGCACGACCATGCCGAGCACGGCGTGGC GGCGCATTGGGCCTACAAGGAGGCAGGTGTCAAAGGCTACGCTGGCGTCT CGGCCACCAGTTCCTACGACGCCAAGATTGCCGTGCTGCGCCAGTTGCTG GCGTGGGAGCGTGATCTGTCGGGCACTTCGGCGCAGGATGTCGGCCTGGA TGACCGTATTTATGTCTTGACGCCCGAGGCGGCCATTGTGGAGCTGCCGC AAGGCGCCACCGCCGTCGACTTTGCCTACAGCGTGCACACCGATCTGGGG CACCGCTGCCGCGGAGCCCGAATTGATGGCGTGATGGTGCCTTTGAACAC GCCGCTAAAAAATGGCCAGACAGTGGAAGTGACGGTGGCCAAGGAGGGCG GGCCGTCGCGCGACTGGCTGATGGCAGAACAAGGCTACCTGGTGAGCCAC CGGGCCCGTTCCAAAGTGCGCGCCTGGTTCAACGCCCAGGCCCTGCATGA AACGGTTGCCAAAGGCCGCGAGGCGGTGGAGAAACTGCTGCAGCGCGAGG GTAAGACAGCGCTCAAATTGCAGGACCTGGCCGCGCAACTGGGGTTTAAC TCGGCCGACGATCTGTTTGAAGTGGTGGGCAAGGACGAGTTCTCGCTGCG TAATATCGAGACCCTGCTGCACCCGCCCGAGCCGGTGCAGGCCGACGATG GGCCGCTGCTGAAGAAGCCGCGCAGCGCCAGCAACCCGGCCAAGGGTGGC TTGTTGGTGGTGGGTGTTGATTCATTGATGACGCAGTTGGCCAAGTGCTG CAAACCGGCCCCGCCTGACCCGATTTGTGGCTTTGTCACCCGCGGCAAAG GGGTCAGCGTGCACCGTGCCGATTGCTCCAACCTGCGCGAGATGATTGCC CAAAATGGCGAGCGTGTGATCGAGGTGGAATGGGGCCAGCCCCCAGGCAG TGCGAATGGATCGGCGGGCAGCGCGGTGTACCCGGTGGACGTGGCGGTGC ACGCCATGGACAGGCAGGGCTTGCTGCACGACATTTCCGAGGTTTTCACC AAGGAAAAGATGAACGTGATCGGTGTGCAGACGCAGTCCGTCAAGGGCAT CGCCTTGATGACTTTCACGGTTGAAGTGTCGGATGCCGGACGGCTGCACA AGGTGCTGGGTGTGGTAGCGGAGTTGCCGGGCGTGCGCTCGGCGCGGCGG CGTTGA >Rfer_1980 response regulator receiver modulated metal dependent phosphohydrolase ATGACGGATAACAGCACCACGACACCCGGCGCCAGTGCAGCGCTGCTGCC CACCATTTTGTGCGTCGACGATGAACCCAACATTCTGTCGGCGCTCAAAC GGCTGTTTCGCGGCAAAGGCTGGCAGGTACTGTCCGCCGAAGGGGGCCAG GCCGCCCTGGCGCTGCTGCAGACGCAGTCGGTTGACCTGGTCATCTCCGA CATGCGCATGCCGGAGATGGATGGTGCCCAGTTTTTGGCGCAAGTGCGCG TACGCTGGCCCGACACGGTACGCCTGCTGCTGACGGGTCACTCCGACATC GACGCCATCATTGACGCCATCAACCGGGGGGAGATTTACCGCTACATCAC CAAACCGTGGGACGACAACGACATCGTGCTGATCGTGCGCCAGGCGCTGG AGCGCCAGGCACTGGAGCATGAGAAGAAGCGCCTGGAAGCGCTGACCACC CGCCAGAACGAAGAACTCAAGGCCCTCAACACGAGTCTGGAAGCCAAGGT GGAAGCGCGCACGACTGAACTCAGGATCGCCAACGAGTCACTGCAAGACG CCAATGAGCGACTGAAAAGCAGCTTCGTCACTTCGATCAAGGTGTTTTCC ACCCTGATGGAAATGCGCGGCGGCAATTTGGCCGGGCACTCGCGTCGTGT GGCCGATCTGGCGCGGCGCATGGCCACCAAGCTCAAACTCGACAGCAAAC TGGTGCAGGATATATTTGTCGCCGGCCTGTTGCACGAAATTGGCAAGGTC GGTTTTGCCGACGAACTGCTGAACACGCCGGTGGCGATGATGAAACCTGA ACAGTTGGACGCCTACCGAAAACACACGGTGCAAGCCGAGCAGTTGCTGC TGCCGCTGGCCGAATTGCGCGCTGCCTCTGACATCATCACGGCACAATTT GAACGCTTTGATGGCAGCGGCTTCCCAGCCCGGCTTGGCGGTCCAAACAT ACCTATCGGAACCCGGATTTTGTCGCTGGCCAGTGACTACGACAACATGC AAATCGGCACGCTGACGCACAGCCGTCTAAAGCCGGAAGAAGCCAAAACC CTGATTGTCCGTGGCAGCGGGCAGCGCTATGACCCGGAGGTGGTGAGCGC CTTCCTGGAAGTCTTCAGTGGCGTGCCACGACAAGCCGCTGACAAGGAAA GCTTTTCTGAAATGAGGGTCAAAGCGTGCAACCTGAAAGCAGGCATGATG CTGGCACGCGATCTCCTCGCACCGAGCGGCCTATTGATGCTGTCGGCAGA GCATGTGCTCGATCAACGCATGATCGGCAAGATCATCACTTTTGAAAAAT CAGGCGGCATGGAATTAACCGCCTACATTCGCGTGGCTAGCGCATCCTGA >Rfer_2482 putative signal transduction protein ATGATTTTGTCAGCCTCATCCATCCCTCGAATTTGTCAACGGAGTTGTGT AGCCGTGGATCTCAATACCCTGCTGGCCTCACAGTTTGTCCTGCCCAGTA TTCCGAAGGTGGTGGCGCTTTTGCTCAGCGAGCTCGGGCGCAGTGAGCCC GATCTCAAGACCATCACCCAACTCATCAGCACCGACCCGGCCCTGACGAC GCGCTTGTTGCAGACCGCCAATGCGGGCTTTTTCAAGCTCTCGGGCAAGA TCAACAGCGTGTCGGAGGCGCTGGCCATCCTGGGCCTGGCGCATGTGCGG GCCATGGCCGCCCAGGCGGCATCCGCAGCTTCGCTGAAGGCGGTGCCGGG CATCAACCTGCAGCAGTTTTGGGCTTACAGCCTGAACGTGGCCAAGCTGT CGCGCTCACTGGCCGGGGTGGTGCGGCAAAACCCGCAGGCGGCTTTTACC TGCGGCTTGATCCATGCAGTGGGCGAACTGGCCATGCACATCGGCATGCC CGACGAGGTAGCGGCGCTGGACCGCGAAGTGGACCCGCTTGATTTGCGGC GTGCCAGGCTGGAGCACCGGTCTTTTGGTTTTTGTTACGCCGAGGTGGGT GCCGGTTTTGCCAGCAAGTGGCAGTTTCCGCAGCCGATTGTGGATGCGCT GGCGCACCAGTACGCGCCGTTCCAGGACGAGGTCTATGAACCGCTGGCAG GGGTTATTCACCTGGCTACCTGGCGTGTGCGCGCCCGCGAGGGCGGGCTA TCGGCCAATGCCCTGGCGGTGACGTTTCCGGGCGCGGTGGGAGAGGTGCT GGGCCTGGACATTGACATCGTGCTGCAGCAGGACCCGATTGACTGGTCAG CCCAGATGCCGGGGCGATCCTTGATTTAA >Rfer_1712 transcriptional regulator, LytR/AlgR family ATGGCTCTGAAGGTATTGATCGTGGACGATGAAGCCCTGGCGCGCGCCCG CCTGCGAACGCTGCTGGGGGATTGCAACGCGCCTGCGGCCAGTGTTGAGG CCGAGGCCGCCAACGCCGCGCAGGCCTTGGCGTGGCTGCAGCACCACCCG GTCGATGTGGCCTTGATCGATATTCACATGCCGGGTTCCGACGGCTTGAG GCTGGCGCAGACGCTGCGCACGCTGCCCCAGCCGCCGGCGGTGGTGTTTG TTACCGCCTACGCTGAACACGCCGTGCAGGCGTTCGAGGTCGAAGCGGCG GACTATCTGACCAAGCCGGTCCGGCTGGAGCGGCTGCAGCTTGCGCTACA AAAAATAGAGCGAAATAGGCAGAATGGACGGGGGCCGCAGCCCGATTTTC CTGGGGAAGTGTTGATTATTCAAGACCGTGGCCGGACCGAGCGTGTACCG CTGGCCGAGGTGTTGTACCTCAAGGCGGAGCTGAAATACATCACGGTCCG CACGGCTGCTCGGAGCTATATTCTGGAGGGCTCCTTGAGTGAGCTCGAAG ACAAGTACGGGACGCGCTTCCTGCGCATCCACCGTAATACCCTGATTGCC CGGCGCGCTGTGCGCTCGCTGGAGAAGTACCATGACCCGCAAGAAGGCGA GGGCTGGGCGGTGCGGCTCAACGGCATTGATGAATTGCTGTGGGTGTCGC GCCGGCAATTGGCGGCGGTGCGGGAGCTGGTCGCAAGTTAG >Rfer_2355 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor ATGACCGGCCAAGACCCAAGTCCTGCCCCAACACAAGCCGTCCCGACGCC GCCGCCCAGCAGCTTTCCTATCGTCGGCATCGGTGCCTCGGCCGGCGGCC TGGCCGCGATTGAAGCGTTTTTCTCGGGTATGCCTGCCGATGTTGACCCC GGCATGGCCTTTGTGCTGGTGCAGCATCTGGACCCGGACCACAAGAGCAT TCTCACTGAACTGATCCAGCGCACCACCCGCATGCAGGTATCCGAGGTGA AGGACGGCATGCCGGTGCAACCCAATTGCGTCTACATCATTCCGCCGAAT CGCGACATGGCGTTTCTGAACGGCACACTGCAATTGCTGGAGCCCGCCGC GCCACGCGGGCACCGCCTGCCGATTGACTTTTTGTTCCGCTCACTGGCCC TGGACCAGCATGAGCACGCCATTGGTATCGTGCTCTCCGGCACCGGCAGT GACGGCACGCTGGGCGTGCGCGCCATCAAAATTGACGGCGGCATGGTCAT GGTGCAAAGCCCCGCCTCGTGCGAGTTTGACGGTATGCCGCAAAGCGCGC TGGCCACGGGCCTGGTGGACTATGAGCTGCCGCCGGCCGAGATGGCGCCC CAGCTGATCGCCTACGTCACCCATGCCTTTGGCCACCCACCCCAGTCGGC CACCGTGGCCGAGCCGCACACCGAGAACGCGCTGAAAAAAATATTTGTCT TGCTGCGCAGCCAGACCGGGCACGACTTTTCCCAGTACAAACCCAACACC ATTTACCGCCGCATTGAGCGCCGCATGGCGGTGCACCAGATCGACGGCAT TGGTGGCTATGTCAAATACTTGCAGCAAACGCCGGTTGAAGTGCAGGCGC TGTTCAATGACCTGTTGATTGGCGTGACCAATTTCTTCCGCGACCCCGAC GCCTTTGCCGTGCTGGAGTCGCAAGTGATCCCCAAGCTGTTTGAGGGCAA ACCCGCCGGCAGCGCGGTGCGCGTCTGGTGCGCCGGCTGCTCAACCGGCG AAGAGGCTTATTCGATCGCCATCCTGCTGCAAGAGCGACTTGAGACCCTT AAAGTCAGTTACCGGGTGCAGGTGTTTGCCACCGACATCGACAGCCGCGC CATCGCCGTGGCCCGGGCCGGACTCTACCCCGGCAGCATTGCCGACGATA TCTCACCCGAGCGACTGGCCCGATTTTTCACCGCTGAGCCCGACGGCAGC GCTTACCGCATCCACAAGAACATTCGTGACCTGCTGGTGTTTTCCGAACA GGACGTGATCAAAGACCCACCGTTTTCCAAGCTCGACCTGATCAGTTGCC GCAATCTGCTGATCTACCTGGGCCCCGAACTGCAAAAGAAATTGATTTCG CTCTTCCATTACGCTCTGCAACCCGGTGGGGTGCTGTTTTTGGGCACCTC GGAGACGGCTGGCGAGGCCGGCGGTTTGTTTGCCGTGCTGCAGCGCAAAG CCAAGATATACCAGCGCAAGGAGGATTTTCAAGGGGCGCAGCGCGCCGCC CTGGGCCGGTTTTTGCCACCCTTGACCGACCAGGACATCACACGGCCGGT TGCACCTGGCAAAGGCGCACAGCTGCCCAAGCTGTCATTGCGCGAGCTGA CCGAGCAAACCCTGTTGCAGCAAGTGGCCCCGGTAGCGGCGCTTGTCAAC GGCCACGGCGACATCCTCTACCTGCATGGGCGCACGGGCCTGTACCTGGA GCCCGCGCCGGGCGAAGCGGGTATCAACAACATCCTGAAAATGGCGCGTG AAGGCCTGCGCCGCGACCTGACCACCACCCTGCACAAAGCCGCCACCAGC CGCGACACCGTGCGCGCGTCGGGTGTGCGGGTCAAGACCAACGGCCACTT CACGCTGGTCAACCTCAGCATTTGCCCGGTGGCGGGCGGCCCGGCGGCAG CGCTGGAGTCGCCTCTGTTTTTGGTGATGCTGGAAAAAGCACCCGATGCC AACGCCGCTGAGTCCAAAAGCCCGCCAGCCCCCGCCACCCTGCCGGCCAT CAGCGCGGCCGGCGGCAGCGACAAGCTGCGCTCTGACGCCAGCGCCCAGA TTGCCGAACTCAACGAAGAGCTGCAAGCCAAAGAAGAATACCTGCACGCG GCCAATGAAGAGCTGGAAACCACCAACGAAGAGCTCAAATCAAGCAACGA AGAAATGCAGTCGGTCAATGAAGAGCTGCAAAGCACCAACGAAGAACTGG AGACTTCCAAGGAAGAAATGCAGTCGATCAACGAGGAGCTGTCCACGGTC AACACCGAGCTGCAAACCAAGGTGAGCGATCTGTCACGCGCCAACAACGA CATGAACAACCTGCTGGCAGGCACCGGCATTGGCACCATTTTTGTGGACC ATGCCTTGCGCATCCTGCGCTTTACCCCGGCCGCAAGCCAGATCATCAAC CTGATTCTGAGCGACGTGGGGCGTCCGGTGGCCCACATCGTGAGCAATAT GGTGGGCTACAACACCCTGGTGGAAGACCTGCAGGCCGTGCTCAAAACCC TGATCCCCAAAGAGGTGGAGGTGCAGACCACCGACGCTAAGACCTACACC CTGCGCATCCTGCCCTACCGCACGCTCGACAACGTGATTGAAGGCGCGGT GATCACTTTTGTTGAAATCACCGAAGTCAAGCGCACGCGCGCAGCGCTGC ACAAAACCAATGAACTGCTGCGCCTGGCGGTGGTGGTGCGCGACGCGCAT GACGCCATCACGGTGCAGGACCTGAGTGGACGCATCATCGCCTGGAACCC GGGCGCGGAGCGCTTGTATGGCTGGAGCGAGCTTGAAGCACTGCAAATGA ACGTGCGTACCCGCATCCCCGCGGAACTGCAAGAAGAAGCCCTGGCCCAG GTACACCTGCTCAGTCAGGCGCAAACGCTGGCGCCCTACCCGACCCGGCG GCTGACCAAGGACGGCCGGGTGCTGAACGTGTTGTTGACCGCCACTGCCT TGCTCGATGAGGCGGGCCAGGTGTATGCGATTGCCACCACCGAACGGCCC AGCGATGACCCGGTCGCGAAAGGCTAA
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