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# Syntrophus aciditrophicus SB

>SYN_00715 sensory domain linked to a LuxR regulatory protein
MTSTRKFIHKASLREKAEEQLKMKNEEIAVPQTAAQIKELIHELQAKQIE
LEIQNQELKQANSELDASQKMYKGIYELAPVGYLTLDRHGVIRKSNLTGA
NIIGMGRSRLINRQFALFLPEENRLFFKDFLNRIFATKTSKSCELTLQNL
IIAGIVAIPSEGGNECYLVLGDITDRKQAGEALAKSEMLYRNLFENSPIG
MFQYSHIEKRLLRVNAAYAKMLGYESPEEMVSAITDVTTQIHNDPQNHIN
VLAALKERDWFYGEQPLLHKDGSVIIAKVAVRKVLKADGTIDYTDGFVED
VTEQRRLEETEKKHLDEITDLYENAPCGYHSSAKDGTILRMNQTELSWLG
YSRDEVIGRMKLMDLLSPDEIEHFHQVFPVLMKQGQLHDLEGKFIRKDGS
IFHALITVTAIYDENGDYLMDRVSVFNNTERNRAEQALAENEALYRNLFA
NASIGMFQTTLEGRFLRINRAYATMLGYESPEEVIATFTNTATQLHADPR
NRAELLSALERQDWFYAEQPYLRKDGSIMIGKLAVRKVVAQDGTTSYLEG
IVEDITERKKAGEALIKNERELRIKAQNLTDVNTTMKVLLNSMENDQEKL
KERFLDNIKAQVLPYLKKLKNTSLDDVQKGLIKIAETNLDEIASPFVQKL
TSNYLNLTKTEIQIASLVREGKTSKEIAAILNSKKRVIDFHRENIRKKLG
LNNKKGSLSILLRSYS
>SYN_00965 chemotaxis protein that stimulates methylation of MCP proteins
MNSKAIKPSCEYFLLPGYIFMSPEPYLISTVVGSSVAVALWDADSKLGGM
LSFLYPFRESSAESTAIYGNVAITYMVRMFREEGAKKKNLRSQIFGGAES
DCCEADQIAHENVKTARSVLKKHGIKVISEDVGGRLGRKIVYNTFQNEAL
IYKVNTLRNSDWYPYDGQGRQA
>SYN_02713 response regulator containing sigma 54 interaction domain
MQKSILIVDDEESICKSLGDILVDEGYEVQTVQSGEEAIRLLDEDLPGIV
LLDIWLPGIDGMEVLKTIKSLHPKLPVVMMSGHGTIETAVKATKLGAFDF
IEKPLSLEKIILTLKHALDLSRLEEENVLLKQKINRDYELTGKSPPIIEL
MEMISIVAPTNAWILIMGENGTGKELVARAIHRQSKRADKPMVEVNCAAI
PEELIESELFGHEKGAFTGATEKKRGKFDIAHEGTIFLDEVADMSLKAQA
KILRILQEKKFERVGGNKVIQLDVRVLAATNKDLEKEMEEGRFRQDLFYR
LNVIPLKVPPLRSRKEDIPLLAERFLSDFALKEGEPGKTIQDDALALLME
HSWPGNVRELKNFIERLAIMTTSNVITVHDIPPLPRDGHKVEPFREPGFE
LLAGSFREAKMDFEKQYISRKLREFDGNISKTAESIGLERSNLHKKIKAY
GLESKND
>SYN_00434 chemotaxis protein methyltransferase
MDRFISDEQWRRLAEWITFHMGLHMPRERLPDLKRRLLSAAREFHFDSIE
PFVSWLLSTKLTQRQIETLASHLTVGETYFFRETASLEALEKYILPELIE
SRRSTRSLRVWSAGCATGEEPYTIAIMLSRLIPDISKWQVTLLATDINAR
SLERASQGIYREWSFRGDFQWLKDQYFTRTLDGRYRISEKIRKMVTFNYL
NLATDTYPSLYNNTNAMDIIFCRNVLMYLEPSLAKRVVGRFYRALIDEGW
VLPSVTEGFHLLFTRFVAVTFPGVTLYQKRMDQRGTLEIYHHSRRNSKND
AAVKGQTELGEWASLSTAEPLPSDSIPERKTEPSRMAPSVSEFPPSAAMK
EIGEEALHESALRLFKEGRYSECEQILTSLLEQYPESFHGQALMARLHAD
QGRLPEAQEWCEKAISNNKLDAGCHYLLAVIFIEQRRFGDAEQSLHHALY
LDPDFVLAHFTLGNLVREEGRKTLSSKHFEHALLLLQNYQPEEILPESDG
VTAGRLKDIILMADLGRSNAPGA
>SYN_03717 hypothetical cytosolic protein
MLKTINERRQAMAKKFLVALDKSSNSLRAVKFVADNINCAAQITLMSIVP
DIAAACELRDPSEVHPLLKENIKDLCVIEEAKTAAMEGFLDEAKKALVNA
GFPSENITVCLRRQQTDVAGDILMEAGEGGYDTIVAGRRGVSGVKQFMFG
SVSSKIINHAENVSVIVVD
>SYN_03377 hypothetical cytosolic protein
MDEIDHAQQHEAMHREIALREHFRRRDNYSERGRNPGLHPKGAGPGERRI
CRDCGEEIQPARLAAMPFAVRCIECQGIKERRERHG
>SYN_01017 deacetylase family protrein
MKVIYHDDFCQSYTSDPAAAHGRMEAIVNAIQDRVEFVKARPAEESDISA
VHTPSHIALVEREGLYEIASLAAGGAIQAAQIGMNEPAFALIRPPGHHAS
AGSAWGFCYFNNMAIALEKLKREGWIVKAFILDFDLHFGDGTVNILERKG
YVTIYNPSAHDRNEYLRNIEKHLSSESFDILGVSAGFDNHEEDWGGLLTT
EDYRVIGKMVCEACQKYRCGTFAVLEGGYNHRVLGRNVLAFLEGLEGR
>SYN_01954 signal transduction histidine kinase
MIEEGDKAEERDMEYPDSNSEMSEVQLLQTLSDLREKMAALEKERSEHLL
EQDLYKTLANSSQVGVYILQDRKFQFVNPHIAEYAGYREEEMVGMESLSL
IHPDDRLTARKNAIRMLKGQRFSPYEFRIITGDGRIKWIMETSTPIYYRG
KRAVLGNSMNITGQKEARNRLEELEALESSILDAIPHAVVGLHNRRFIFA
NNAVQDVFGWLPEELIGRSVRLIYRNDADHDEIARRFYDSLEKQRTYSTE
FPCRHKDGHEIICLMRASRIGERLTERRIVVTYEDITERKKAEKELEESR
EKMRNLSIHLQSVREEERTRIAREIHDELGQSLTAFKMDLSWLGKRMTSE
KLLHDKIKAMSGLVDRTIESVHRISADLRPGLLDDLGLVAAMEWQAKEFS
ARSGIACEADLEAEDVPLDKEPATAVFRIFQETLTNVARHSNATKVFVRL
ETKGDKVILEVTDNGRGITQKQINDPKSFGIMGMRERALLWGGDVQVIGS
RSRGTTVKVSIPLKSGEKE
>SYN_02357 anti-sigma regulatory factor
MKVTRMTCEARIGNLEEVINFVDGCADRIGLTGIKKNKALIAVEEAFVNV
CHYAYPGGTGEVELTCRGKNDAFEFEIADNGIPFNMLSLPDPDTTADIME
RKIGGLGVYLIRKLIDDVSYRRKDGQNILRMVLHTRK
>SYN_00981 response regulator with a winged-helix DNA-binding domain
MEGGTKEDFMPTGQKRILVVDDEKDIVELLTFNLEKEGFAVTQAFDGEEA
LKTIRTNKPDLVILDLMLPGVSGLDICRQVRRNEETETLPVIMLTAKGEP
LDKVVGLEIGADDYITKPFNVRELVARVRAVLRRSSQRPKEASEGTFTFQ
GLHVDYRTYQVSVDGKKIELGPTEIKLLRCLTRQPGRVFSRDQLLDAVWG
EEAFVEPRTVDVHISRLRADIEQDKEKPKYILTVRGIGYKFADGS
>SYN_00974 response regulator CheY-like receiver domain
MIKTIFSQNECNTRLQDILPKRKNGMKREILVVDDEETIRYLFLNLFSES
LYDVHTAGNAPEALQILKNNAIQVIFLDLKLFGMNGIALCRQIRQTTPLA
IIHAITGWAALFDIEECRGAGFDDYFVKPLDMDLIALTVQESFKKLDRWK
RH
>SYN_00875 response regulator containing a CheY-like receiver domain and an HD-GYP domain
MNNDIVIVEDSLTQAERLRYTLEEHGFHVLHARNGQEALQLISNNQPAIV
ISDIIMPEMDGFELCKRIKSDPLKKATPVILLTVLSDSRDIIRGLECGAD
NFITKPYDEENLLSRIQYFLTQREHGYEAPCESAEEIEILIGGQKYSITA
DRKRILNILISTYETAVQKNRDLLRAQQELRILNEHLENRVQERTQELME
EIARRRQVEEDLRRQEQDLRVKSRNLEEVNTTLHVLIKNREMDRIDQEQK
ILSNCKELILPYVEQLKKQKLPPHQMTCVEIIEANVQNIISPFLQSLSSE
LAHLSPKEVQVANLVKEGKTTKEISELLNLSIRSVESHRDNIRVKLGISN
EKINLRSFLLSLS
>SYN_01636 signal transduction histidine kinase
MEIFEQFPLGVYVHFFQHKVRINRMNHKMELKDILLAHRKEINVKWSIVV
DKHYCEQGYRQEPFEDTLAVNLEAVDANYAVLANRDFAPLDDFIEKIARK
RFAAGFDLSDVQMAFEYYRTITIPIITKELPQNKMTPALERLNNCLSYTI
IKFSDYFQNLHEKALKEHAEHLELEVMKRTKELAELEAKYRVLVEEINDG
YFVEKKGRIIFANHAFCDMHGYTPTEVINQPYINFVASEYVSKVTSYFEK
DLNRESESEQYAYKRLHKDGSFFPTENKVKRIWYKGDYAWAGICRDITER
VKMAERIRESEKLAHIGQLTTSLAHEIRNPLSSIKMSIRMLLKSMDFDGD
NKKTLEIADREISHLERILTEMLDFARPVKLCFELLSINQLIYSCLEILK
VTIREKEITVIEKLSKRMSPSMMDGNKIEHAIINILLNAIEVLPTGGIIS
IETHHRKLDHKPFISVEISDNGPGVTSEDLPYIFNPFFSKKKKGTGLGLS
NVKKVVDAHGGKIAASATSKGFSISFTIPVRKDHV
>SYN_01808 signal transduction histidine kinase
MTLKTRLMIITLFGLAITMALWGWIQLSVLDRILREQQYKRLDNIAETLS
AFYQRFPSARGLSALDTALKDHIQTDVRLARIDIISLSGDDVDYIAGAGR
VPYEWPENLIIRTDGKMEKHHYALQTEAGSAIGLLYPVHPEKGSSAKTMI
GVILFSQSDMEILSRARWMLFFSTLGLLVIILLVMAVGYDFLIGRPLRRI
IETIDHFRTGKQASRIPIDRSDEWGQLADHFNVMAGEIENFIAQNQELNR
GLELRVKEATLKVVQLQRQVNQLQQLKALGYLTATLAHDLGTPLHSIAGM
TQLLLERDEWPPDTARKLELILQQTQRLNTVIQNVRRATRLPEPHFESIP
VQRLLDDTLPLVEPVIQKSKVELLVQIAPDTPPLYVDNYRVQTALFNLIQ
NALEAMPHGGKIFVSARVSNDRQAIAVTVQDTGPGIPPSMMGKICEPFFS
THPGEGIRGLGLAIVQDIVKAHAGSIDIQSQPHKGTCITLFFPIACRLQE
IPG
>SYN_00099 two-component response regulator
MAVDRKNQSYNELQHISARFNQFILDNTRDLIAIHNLSDLSYEYVNPATL
KALGYEKEELLAKNAIGLVHPDDKERFLIYLKEHLHNSVRHHEEFRYQKK
DGVYIWLEVTIDVILENSSIVTISRDINRLKQDKEHQQSPGDLFYTLLEQ
APVAIGIDRDGRNLFVNGAFLDLFGYESNAELLGASILNQVAPSFRDEIA
EHLSLRSEGRVSPYWQEIQGQRKDGSIFPLLVQVYSIHLPNGPANIAFLT
DLSGQKQAEAAMKQHIAAQTLILEISDIFHKLSLEDIDAMINNTLKMIGE
FDNNDRSYVFLLSEDGSTITNTHEWCRQGIQAASTEIQNIPVSLYPWGME
KLHTIKHIYIPRANDLPPEAHREKEIMKAHSVQSVFIVPMILENQLIGFL
GFDSVRSEKIWSKESIMILESVAHIFANAIQRKKYNLYLNQAIQVLETGL
DRMQKIMMQFVSSLGTVLDIRDPHTSGHQRKVAKLAEAIAEEMKLSEDQT
KGIAVAGTLHDIGTIKVPTEIMSKPQGLSDIEFELIKTHSQAGYEIVKEI
DFPWPVAEAILQHHERMNGTGYPRKLAGDDILLEAKIVAVADVVEAITSH
RPHRKALDIDMALDEISHNSGILYDTDVVEACMRLFREERFNWN
>SYN_01363 adenylate and guanylate cyclase catalytic domain protein
MKMNYLMVVDDEEGVRRSLRKVLAKDGYEVITAETGEEALKIVADRKHDL
ETVISDFKMPGMDGLQTLVEIGRMNSEITRIMLTGYATMESAIAAVNAGI
DGFLTKPFENIEIRAKVREYNIKKRLKSFVSVQILNELQKGNRTIAPRRQ
KVSVLFSDIRGFSEIAEKMSAQELADMMNDNYFEPLDNIVYECDGTLDKH
IGDSIMGVFGSPLSHDDDSYRAVSCAIRMKETMKAVNENLPGNRYFNIGI
GISTGEAMAGIFGSSHKKEYTVFGPTVNLASRLEKLAQENQILICEETYQ
QVRDLVSAEPVYSSTEIKGIERKINIYSVIDHIK
>SYN_00228 histidine kinase
MEPAGSNIKLMIESRIENVSLVGEAVRGIANALSLDELSCYQLELCVVEA
VSNATKHAYHSEQGHPVEVDVLLFRDRITFKISDQGDSLKSPKVKLLRFD
PQNLETVPESGMGLPIMHALMDEVSYETVSGRNILTMSKYLRKQGPSV
>SYN_00127 response regulator receiver domain
MSKIPANRTVGRWIQGGERMMEEGKTLFNEVASGSYDASDRPFDFVTEQG
ETALVCESDPGLKDKTGQALFSLGYSVKEAESVRDALKKMRFHVFDVIVV
NADFDEGKGARELLTALELLDVSIRRRIFVTLVGDSFRTRDSMAAFHRSV
NLVVHTGDLNELGTIVKNGVQENKAFYHTYMEALRKMGRS
>SYN_00973 sigma-54 dependent transcriptional regulator
MESCLESGTVTMKNQKILIAEDDDLNRSNLTELLNAEGYEIKAVDNGRKA
MDAFVEDKYELVITDLKMPNGDGLELLKFVKDMNPDNIVIMMTGYGTVDS
AVEAMKLGAFDYISKPMRNDLVTLTVNRALSYASLQEENVTLRDHLREQY
DFGKMLGYSECMKTIFDTIEKVAKSDSTVIIYGESGTGKELVARAIHFNS
NRNNFPLIPVNCGAIPEDLLESELFGHEKGAFTGAIRNRLGRFELAQGGS
IFLDEIGDMSPALQVKVLRVIQEKQFERIGGVKTINADVRIIAATHQNLE
LAVTEKRFREDLFYRINVIPIHLPALRERGADIAILANHFLQKFAQSKKK
EVTRFTPEAIACMLHYPWPGNVRELENLIEMLVVMKEDGEIKLEDLPSKI
RQFKKETQSFKEYQIPEEGIDFNDVVYQFEKNILLKALAKTNGVKNRAAK
LLNLNRTTLVEKLKRLNISSES
>SYN_01538 universal stress protein family
MFERILYPTDFSDVSKKAMGYVKQLKDAGAKEVTVLHVIDERSLTGSVHE
VFIDFMAVENELRKIADEECGKLVAQFLEKGLNAKFRIEKGIPFLEILKV
SKEEKSSIIVIGSHGKSNIEEMLLGSVSEAVIRKADQPVLVVKR
>SYN_00314 universal stress protein family
MTVMFKHILVPVDFSPKNRHALDIALKIAESDKSRISLLHVVEIIADTTF
EEYREFYAGLEKRAQKKMASLTAFCEAQGVPAADRIAFGNRVQEILSHAA
ETGVDLIVMSSHKLQIEEPPQDWGTISYKVGILSQCPVLLVK
>SYN_02722 sensory box/GGDEF family protein
MEKESRDMLTFLKTLIDAIPSPIFYQDISGLYLGCNRAFEEFLGLKKEKL
VGKSVYDVFPKDLAEKYYTMDSLLAHQGGQQTYEDQIIDANGKTHDVIFI
KVTYLNTDGVPAGLVGVMVDITERKRMEAELLSMSLRDQLTGIYNRRGFI
NLAEQWIKTANRAKRQMLLSFIDVDDLKKINDTLGHEGGDKALVETANIL
RQTFRESDIVARIGGDEFAVLVLDMTDLNPEILSRRLQHNIDEWNAKVSR
QYKLAMSWGMTLYDPESPISLNQLMSLSDKLMYARKKAKMNKSI
>SYN_01093 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
MKSLNILVVEDGQSQREMLRDFLLKEGHTVEEAASGEEAVQSIAGGAFDL
VLLDYKMPGMDGMQVLQEVKRLNPETDVVIITAYGTIETAVDAMKAGAVD
YITKPLEFDELLLLLDRVAERRTLIRENEILRRQLKDQGVTTDAIIFTSQ
KMAALTSMAARVASSRATVLLQGESGTGKELLARLIHQLSPRSTRPIITV
NCGALPESLIESELFGHEKGAFTGATSRRIGRFEEADGGTLFLDEIGELT
MPVQVKLLRFLQEREFQRVGGNTNIRADVRIISATNRDLETMVKEEKFRE
DLYYRLNVVVMSIPPLRERREDIPALIDHFLERFAAENGKKISGISSEAR
DLLMKYDYPGNVRELENIIERAVVIARNEIIYMEDLPFREDTLVATSGGV
PEEGEGRLRGAIENLEKQMIQDAMEKAGDHQTRAAEMLGLSERMLRYKLK
KYGLKS
>SYN_02593 transcriptional regulator GerE family
MFIGKKTKSQLIEELEESRNRITELEFVVAEQQQNVKQRSAEEKYRNIFE
NALRKGLEENYEALFESTGVAIAYVDSQGNYLRANDNFVEFIGYSREELI
KMNIMEVTHPDYMEQTREFLAKQIKGEIDQFTLEKYYVRKDGTLRWGEMK
YSPILDDRGRALSAVVAIIDRTQRKQAEERLKKYLAQIEDLYENAPCGFH
SLGNDGTVLLMNDTQLGWLGYSRDEVIGKMKFTDMVTRKDMERFRRLFPI
LKEQGRLSDVEGELIRKDGSVFPVIINTTAIYDENGNYRMSRAVVFDNTD
RKQAEDALAKSEALYRNLFENASIGMFQTTLEGTFLRINSAFAKMLGYDS
PKEVTETITDTYSQIHPDSRNRTILLAALQQQEWFYAEQPYLRKDGSIMI
GKLAIRKVIGQNGTPDYLEGIVEDVTERKQAEEALIRSEQELRLKAQNLE
EMNATLKTLLNTIEKDKEELKERILTNIKQQVLPYLDKLKKTPMSAIQKD
FVKIVEQALDEIASPFVQVLTSRYLNLTAKEIQIAALIKEGMTSKEIAEL
LNISKREIDFYRGKIRKKMGLKNKKFNLQLLLRNFS
>SYN_01635 sigma-54 dependent transcription regulator
MCKKKILIIDDDASQLELLNIFFSGRGYAVHCSATAMAGLEARATFHPDV
IVLDIRLPDMDGIEVLRSLDTGKSSINVIMITAYHDMETTVKAMKLGAYE
YITKPIDVDELEDAVCRALKNSELREAKELPAVKTFLQKGPMIGNSKPMK
EVFKMIGVLSENNVTVLIEGETGTGKELIARAIHDYGPHKDHPFIPINCS
AIVGTLLESELFGHEKGAFTGAFATKKGKFELAGEGTIFLDEMGEIPIEL
QAKLLRFLQDKAFQRVGGEKFLHSKARVIVATNKDLLQMVRAGTFREDLY
YRLSAAKINVPPLRKRREDIPFLLDHMVKEINAELGKRIDRVDKKALLRM
MEYDWPGNVRELRNVLTGAAISTRGETLLDDAILPFLGAGTVQDIFPPGA
ALSLREVEREHILKILHYTNGNITSSAQILGISRPTLRQKIRQYKILPQQ
>SYN_01178 response regulator receiver domain
MLKLLLVSRDDDSLSGLSAALGGQDDIELEISASGEQALARLSGKAVDLV
VADEDLGDMTALDFSARLLKINPMINCAVVSTLSQEEFHEASEGLGIMAQ
LPKQPGAEDAERLIQTLKRIKGLMS
>SYN_01466 sigma-54 dependent transcriptional regulator
MEMKEARILVVDDDTSMRMALCETLESCGYCIETASNGLEALKKFRKGAF
EAVITDMRMPGMGGMEVLKTIKKISPESPVILITAYGTVNTAVEAMKEGA
SDFIMKPFSLEDIEFVVKNVMATYEEKEFRESKPVEKMTFTDREIITEDE
KILGILEFLKTVAQSKSSVLIQGESGTGKELFARYLYLHSSRRHMPFVAI
NCAAIPDNLLESEMFGFEKGAFTGAIQRKVGKFELANGGTLLLDEVTEMT
PHLQAKLLRVIQEKEIDRLGGKMPLPVDVRIIATTNADVRKCIEEKTFRE
DLYYRLNVIPLKIPPLRERKGDVELLGSYFLKKYSNLNEKPLPVFANGTL
KRLNAYDWPGNVRELENVIERAVLVCGGNVVLPEHLYLEDQGSVSPAAEE
KTSCSLEEVSTDISGIDLSRGMTIWEMEKELIFSTLDKVKGNKTRASEIL
GISVRTMRNKLQEYQMKASLTSE
>SYN_02956 transcriptional regulator containing sigma 54 interaction domain
MPNFRHGSLYPRAAMLCRERPQSAEPGGRVRTLTDTGERLNSEIARRKRA
ERTLRDRLLFEEMLSVISAGFINLSFERIDEEIHHAMKKVLNFFKVDRFA
LLETLPDRKSWMITHCVSGTDVPSVPVGENLPVSLHPWAYEKLIQKREVL
SFSKIDDLPAEADVDKENWIVWGIRSNLNIPIRIGKPVDHIVAINSVKYE
RVWPDELIPRLRLLGEIFVNALERSRAWKALQESEERLNLATVAAGAGLW
ILDTNTGQFWVTQMLRKLFNFLPGEELSFERYEKTIHPDDRKGVRELVQR
SLKTQNDLTIEYRILKPDGNVCWIMTRGRPYGGATGIPLRLMGICMDITE
RKEMENELRKQLAEINKLKLQLEKENIYLRNEIKTERGFGGIIGHSDTLR
YVLFRVQQVAPTDATVLILGETGVGKGMVAHAIHEMSARKDKTMVTVNCA
ALPSNLIESELFGREKGAFTGAYARQAGRFEVADGGTIFLDEIGELPLEL
QTKLLRVLQDGEFERLGSPRTVKVDVRVIASTSRDLKVEMHNGRFREDLY
YRLNTFPVTLPPLRMRVEDIPELARHFIDKYSRKLNKQFESLSKDTMQML
QAYAWPGNVRELEHVIERGVITSPEPVFQLVEQLEQGPGMEADKPIKGFE
TMAREHILQVLHKTGWKIEGKGGAAAILGLNPSTLRFRLKKLGIKRP
>SYN_02380 signal transduction histidine kinase
MIPGENLMKEKDARTESPEADEQIDLRNRIEKREGAVSGALPASVELDAL
INTSPAFFFLWRTQKDCPVEFVSPNISRFGYTAEEFMSGRLPYKSIIFPE
DIERLSKTLTADIEDGAPNPLILEYRIVTAAGEIRWVDDHRMARWNDQGE
ITHYQGVIMDITHRKRTEEELIKTEKLKSFEVMASGIAHDFNNMLSVILG
NINFARMILKAEDQAAQKLTEAEIACGRAKELAQQLLSFARVDSLQKKVT
LLPTLIRNAVRFALNNSSISSEYDFEDSLFPVEVDEGQIMQAISNIVING
REAMPNGGVIRITAENVSHPTDQESLPAAGDYVKITIRDQGPGIPEPVLG
RIFDPYFTTKSLKNDQAMGMGLSMSYSIINNHEGHITVESSEGAGTIFSL
FLPAAAESMIEDPRQENVQAESKGRILFMDDEKMIRDVTGALLTHMGYEV
SCVGDGVEVIELYQKAKEENQPFSCVILDLTIPDGMGGRKTMQKLLELDS
EIKVIISSGYGNDPLIQDFREYGFKGAITKPYKIEELMDTLQRTLK
>SYN_00112 sensory domain linked to a LuxR family regulatory protein
MKNKNKTKVQLANEFEEMRMRMMKLESGEAHHMQAEFCKETLRQSILSLE
VDTGAPGIADILDAPMIESLMNSFHEFTHIPLAIVDLRGKVLAGPGWGDI
CKRFHRVHPDTCRNCIESDILLSAGIPAGEYKLYKCKNNMWDIATPIIVD
GKHLGNVISGQFFFDDESVDYELFRLQAKKYGFPEKEYIAALEAVPRFSR
KSMDAGMTFLMKLARMISQMSYSNIKLVQSLEERETLMKSVLAAEDKYRG
IFENALEGIYRITTSGRFLDANPALAHIFGYDTPEALINAVTPVGELLHV
DPQSREQFIAIMDQQDYATYEGKMLKKDGSPFWIHLRGRAVRDAEGKTIH
YEGFAEDITEKKKIDEELKHYRDDLEAMVTERTFQLQEKNRQLISEIAER
KRVEEALSKNEALYRNLFENIPIGMFQTNFEEGGFISVNPAYAKILGYES
PEDLKSSVANVAKIHVDPKDRDTILAALRDRDWYHAEYPRLRKDGSVMIG
KVAIRSVLKADGSVDYIEGIVEDVTERRLAEEKLKKYAEEVTDLYENAPC
GYHSLAKDGTIIRINNTELTWLGYSREEVVGKMKFTDLIPPDESASFWQT
FPLLQKQGRVSNIEGKLTRRDGSILPVLINATTIFDENGNFLMSRSSVFD
NTERKKIEDALVENEVLYRNLFENASIGMFQSTLEGQFIRINKAYATMLG
YDSPEEVISTITDTSTQIHTDPENRTKLLAALKQEGWCYAEQPYLRKDGT
IMIAELAVRKVTGQDGAISYLEGIVEDITKWKKAEEALMKSERELRIKAH
NLLEVNTTMKVLLDTMERDQEELKERILTNIKEQVLPWLEKLKKRPLQDV
EKDYIQMAESQLAEIASPFIHKLTSSFLNLTKKEIQVASLVREGKTSKEI
AELLNSKKRVIDFHRENIRKKLGLNNKKGSLAILLRSFS
>SYN_00775 two-component response regulator
MAITVILADDHKIIRDGLRTLIESQQGMQVIAEAENGRETIKLAKELQPN
VVIMDISMPDLNGIDATREIVNSIPGVKVIALSMHSDRRFVSGMLSAGAS
GYLLKDCAFEELAKAIRTVVTNHTYLSPMISDIVVKSYINKSPETTTENA
PSLTAREREMLQLMAEGMTAKEIAAHLFVSVKTVETHRRNIAQKLNINRA
AELIKYAIREGLVTL
>SYN_01217 hypothetical membrane protein
MRRSLNKMAEEFRIYWRHYILQSLFATLAVFIVLYLLTLQHAIIIASIGA
TAFIVFTMPDNITAQAWNVIGGHVVGLSCGFLFSLIPHPTLIPSLLVYSL
AVGTSIFTMVVTDTEHPPAAGTALGVAITGISLHVFCAVTLSIILFSVIH
RFFKPYLRDLT
>SYN_00904 GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase
MLRITDILDKTQEYLTPIEQELIEKAYIFSASVHQGQVRLSGEPYMTHPM
EVAGILSDMELDAATIATGLLHDTVEDTLTTLEQIEELFGKDVAFLVDGL
TKISKITFSSQEERQAENFRKMILAMSADIRILLVRLADRIHNMRTLEFH
TPERQKYIAKETMELYAPLANRLGIYRMQVELEDIAFRYLDYESYANLSR
RIALKREKRDEYTEEVKSIIQAKLDEYGMKGVVEGRAKHFWSIHKKMHEQ
KINFDEVYDLTAFRIILDSDKEKDCYEALSIVHSLWIPVPRRFKDYIAMP
KANNYRSLHTTVIGPYGQRVEVQIRTREMHEWAEEGIAAHWRYKEKRSLP
GDDEEQIRKLRELLEVQQELKNPREFMSNLKLALFPDEVYVFTPGGDVRS
FPKGATPIDFAYSIHTDVGHQCIGAKVNRSIVPLKYELKNGDIVEIITQA
GHHPSKDWLKHTVTSRARSKIKNWVKAEESKKSISLGKDLLEKEFRKHSL
KFSSIVKSDEIRDLYNELSVNSLDDLLALVGYGRVSAKRIVNYFVHEEIG
VSEKPPDETISRKGKRDASQGISITGIEDIMVRFAKCCDPIPGDEIVGYI
SRGRGVAIHTVDCERLQELDSERIIDVSWSAKASQTYSVNMVVTCKDQKG
ILAEISSAISSLDVNISSARVETRKDGRVICFFRIDVTGLRQLNALTSAI
KQLKDVISVERVHQTKEQPRPSD
>SYN_02714 signal transduction histidine kinase involved in nitrogen metabolism regulation
MNRNSQIKNNIDEVQRRRRDLILIVVTVLCILAFSFIEHHLFQEEYLLPE
SNNILIFGLININIILIILLIFLIVRNVVKLVFERRQGVIGSKMRTKLVA
AFVSLSLIPTILLFLVSINFLSYSIDNWFNVRVGDALNKTMEVTQIYYKQ
YEKNAKYHAGQLSADIMENQLYEKERVDYLKTLVEQRQKQIKTTVIEIYV
DNRKKGMVFPGPEHADIKTISPTPQVMEEVFAGNEISIIQPSEDGEFISG
LSPIYSSAEPSEAIGAVVVSYYIPKEIVDKVSVISRASEQYSQLHLMKNP
IKISYIITLSIVTLLIIFSATWFGLYMAKGITVPILNLADATRRIARGDL
NHQIDIVADDEIGVLVEAFNSMTRDLKQSNENLEQANMDLEQRRKYMATV
LHNVSAGVISVDEEGFITTINRAAERMLDIRLEKVINRRYEDILSTEHMN
LAEDLLQELAKSGKNQIEKQIELMLKDRVLTILMTMTLVRDGEGHERGMV
VVFEDLTQLQQAERAAAWREVARRMAHEIKNPLTPIQLSAQRLQRKYGER
LAEDGAVFYECTRTIIDQVEILKNLVNEFFRYARMPVTRPMPSNLNETVT
DAVALFQDAHKDIRFEFNLSEEMPKVILDTEQIKRVIVNLLDNAVAAVSK
NDGCIKIRTFYDRINNRAITEVADNGCGVPAGNKVKVFEPYFSTKKTGTG
LGLAIVSSIISDHNGHIKISNNAPRGTVVRFDLPVLENLT
>SYN_00590 two-component system response regulator
MQNRGSMAKVLVIDEDRSTLARLELLLTKDGYETVTASTGTDGLNRYVER
YPDLVILDVFLSDVGGFTVLEELLEENEQAMVILMTAQLDMETAIRAMKL
GAFDYVPKTADMAELLSVVHKASNTLETDRQQGGLSGEAFRNYKAGDIIG
AGREMREIFKMVGVLSRSRATVLIEGESGTGKELVAKVIHKHTSSNEPFI
AVNCSAIVETLLESELFGHEKGSFTSAFNRQLGKFELGRYGTVFLDEISE
MSINLQAKLLRVLQEMEFERVGGKDKIQVHARIITATNKNLRTLVREGKF
RADLYYRLNIVSLKIPPLRERQEDIPLLVNHLIAKIGRDLSRRISGVSEE
VMEAFLRYTWPGNVRELENLLVRAGVMAKGRILDKSDFPELFKESGKIGA
MNEPGSDEYDDFGRLLTLDDVEERYIRKVLQLERGKNKGELCDILGISRP
TFERKLEKYGISFERDGIDQGLSANLSEVEEKIRQ
>SYN_01324 response regulator protein with GGDEF domain
MKVFMAKDRDTMTTVEREELRGISRSVAEIEWLQLIIVLLYYAFGGIADE
DKPIVVLSLVFYAAFIMGFRYANFFKQESRWKLAVETWIMTGFVTFALWH
TGKLESPLLNSYLLVIITSALALGKLTTLLELALIGTCFIFLGSHSSINE
LLSLKYAGGMFAQFAPFVLVAYIATMFASDIRYGLNKVKMMSETDELTGI
YNRRGFAIVAGRLLGQSARYSRPLSLLLIDSDNLKKINDEYGHHAGDQLL
ITLVNTIQAQLRHTDILARHGGDEFIILLPETPPSGALDVAERIRNAIET
TPIVLEGKIVHTTASIGVASYPSEGYNIDVLLAQADHKMYAAKLGGRNRV
VMEVAV
>SYN_01438 signal transduction histidine kinase
MNDFRVAAGSGKRRLLNHREPDENLPLSNAGKSESVPETSPECDFRDDVL
QHGQAEDALRNSDALYSTFFETTQSIVLILTSDARIIACSSAAEKLLGCN
KEQIIGKSYVDLFVPKKDQTKSRKAILNILKGRDCRNVETEVLVRNSVIR
TILWNATRLPGRATRPHGIIAFGQDITERKRMENELLRAQKLEAVGILAG
GLAHDFNNLIAAILGNISLVKAGLNPEEKNCIRLIRAEQSCLQARELTNR
LITFSDGGKPRRHITSLTSFLQKMVFFTPQSASVLCRYRLPKNLYSVRID
ENQIQQVFLHLLRNAEEAMPDGGEIVIEAENFCAASDLPPGLKKGRYVRC
SVRDHGKGIAPEFQSRIFEPYYTSKPKGAEKGSGLSLAICYSIIRKHGGT
ITFSSESGQGTMFSFYLPAVPEDSATVATGRPSLQTMKERILLMDDEEAV
RNITSQLLTHLGYEVELAGNGEEAITRFGQAESAGRPFSQVMLDLTIRGG
MGGFKTLQKLREINPEVRAIIVSGYTNDPIVEFFDEHGFNASLTKPFTIK
QLQTALANSGA
>SYN_02794 phoH protein
MKVKKELSAIEKLHFADNETLKNLLGEQDKNIHLIEKLEPVKLTARGNTV
SVSGDVIAVDLVKNLLLQIYNLIQKGYPVYPSDIDYAHRILAEDNTLTLE
KIFLDTVFISSKKRIITPKSVAQKKYIDAIRTHDMIFGIGPAGTGKTYLA
MAMAVSSLLERKVERIILARPAVEAGERLGFLPGDLAEKVNPYLRPLYDA
LFDMMDFDKATALISKGIIEVAPLAFMRGRTLNDAFVILDEAQNTTSEQM
KMFLTRLGFGSKAVITGDITQIDLPTDRVSGLVEAEQILGKTRGIKFIHF
TDVDVVRHHLVQEVIKAYDRFQHNRATQTESTGK
>SYN_00930 predicted signal transduction protein
MELLNSMSKSLDQLLSLVNHSEIASIKATLSKIIEVIHNPESSVMDLKNL
IEIDPPLAANVLRRANSAFYGMRRGIHSIMDAIIFIGFDAVKELTLNQKF
FELFQKNGVEIHGYSRRVLWEHSIGVALCGKLIYRREFRKNGGDMYTAGL
IHDIGIIVEDQFLHAELLSILADKEEHERDLHSAEADVLGYCHEDIGKRL
AEDWNFPEELCLVLGEAERPETSEGPRLLLADTLYVANCACQLRKVGFSE
LGRLDRPAYEDCLNRLRIKERALDFIMDEVNAQIALMKNDGWF
>SYN_00101 CrtK protein
MAKSFIGLICWLDVSLATGWVGSRFSPGEWYAALAKPSWNPPSFVFTPVW
STLYVFMGLAAWLVWRRAGFFGASVALGLFLFQLFLNASWSYLFFGLHRP
DFAFVDIVALWLVILVNTFAFWRVSMPAGLLMLPYLAWVSFASVLNLQLW
RLNAC
>SYN_01291 signal transduction histidine kinase with PAS domain
MHPLIKLSVDPKGCAPDFCGGWIKMTDTKQDMMEDKREHPKAENLPKIEV
GCGAAKGDDSYAAGFKAAGKALAGITSYRLSAVIVFASASYHLDEVLSGI
RAAVGRVPIFGASSAGEICNGTLSESVSVTALASPFLSVGVGIGKEVSTD
WRKAIHAAIDSGGLNRYFTPQDGSYYNSMTLEGRSAFAILFSPASTSHSD
SYSPEILEELKRLSLGRLLFFGGAAVDAEKTSGHENFIFYNDQVCSDSMI
LAVFETTLRFGIAMGHGLHPTAKRARITRVRDYEVLELDGRRAADVFAEF
HDLKKADLESKPLFEQNLNHLGMRDALGHYTIFTPRCFTPEGGILLAHPA
PEGAFLVLMEAVEDDMIAAGKNTLRQAMMQSGINRPAAILVCSCFLRMLL
LGNRIDEEIAAITDIMPGTPVTGFYSAGEQGSNDDHISRHNNESIVILLL
GNELSYAAQVAGENRIMQRALEFRISEQKRLEKELADQVRFLQTLIKTIP
SPVFYKDQQGRYLGCNRAFEEYNHISRTYLLGKSNWDFLPRDQAELHCKV
DADLAEKGGKAVYECSIAGKDGELFHFLNNKAVFHRADGSLGGIIGVLVD
ITDRKNTEEALRASEEKFLKAFHNNPTMMIICTADEGRVIEVNDSCLRIM
GFTRLEMMGKTSGQLNIHACLEQRDTLLRMMEEKGSVRNMEISLRTKSGE
IRHCLFSAEQIQLQKGNHILLLLQDVTDQKRSEEERLQRIRLQSILNMAG
TICHEFNQPMQVLSGYIDLLLSRAWEDSKVHGSLLKIKEQTARMTQITRK
LMTLNDPSVQDYAGIGKIVNLNGDQGK
>SYN_00970 chemotaxis protein methyltransferase
MMNASELSDHDFERISNLIYQQCGINLHDGKKELVRTRLGRRLREGNFRS
FSEYYKHVTTREGTDELIMMIDSIATNLTYFFREESHFQRVQIIVKSLLD
DSVGQRHRQPGLRIWSAGCSTGEEPYSLGMTIKESLNGFPAEVKITATDI
STKVLKTAVNGVFSIEKTRNIPPVILRKYFQLGYGKWEGYVRIKKEIRDL
VEFSRFNLMEPPFSKFKFDIIFCRNVMIYFDKQTQENVVRKFYNCLNKGG
YFFIGHSESLAGLDNAFKYVEPSVYRK
>SYN_01428 HD domain protein
MMDRLKNYFMTYFEQSFVLLVLISIVLIFYFLPNKLAMLNFFYIPILGAA
YYINHRGAMLGSIFCVFTVILFAWLYPSNFFVEQTPMNLGLHIVIWGGFL
ILTGVIVGTLRQNLLNEISQGVTLKTELKVSKKNLEKVSRDLQEHTEHME
DKIKERTHHLEKSKEAVEEMKERVEDALYSTMDPAVVKLLIEKRLRTEKR
NISVLFSDLKSFTTFSEASQPEIVVTQLNRLFAEMETILLEYKAHIDKYM
GDGIMAEFGAPTHYDRHALMAVMAAMKMQNWVRSSDFPLKMRIGIATGEA
IVGLIGQKRQSYTALGDVVNLASRIEQRCTEGLVTIDETTYEAVNRYVAA
KPLIAQQADTSDPGLSKQIEECAIRLNTNENDPELLTEMGLLLMACDHIE
DAHAYISRALHIAPDNKRIKIAFAESSMKMEKSQALKIKGKRRLIRLYEV
TGMLDPLEDLETLPPHIPETYRRIVDSLVEFPSYAIDSVEAIDGSVGHAR
VVGLLSYALADMLDLPDKEKKDILLGGYFCDVGKTIVPQHILNRRESLSE
KEFEEMTKHSRESARILKKIGYDNEALFDIVAAHHERYNGSGYPSGLSGE
NIPLGARIVAVADSYDALTSWRPYRSSWNYQAAYSEVRKMTELGAYDPRI
VDCLGQLLRL
>SYN_00705 cAMP-dependent transcriptional regulator
MKEPWTRRCSRNNDLQKNMEKMTMPVIDLLKAIPLFESFNNSELRHLASL
LKGQSLDKGEILFHKGDTGSAFFIIANGLIRISVSNKAGDEVTFAHLRGG
DFFGEMALLDEQTRSADATALEDSTLYVLDRNDFFPFLFENENAVHSILR
ALSMRLRRTDDILAETAFLTVSSRLARRLLELAEPSQLSGRESAEYQVRM
SQRELGAMPGVTRESINKELKILKDRGIITTSRGNIGIQDMERLKCRTQ
>SYN_01809 sigma-54-dependent transcriptional regulator
MSIRIIVIDDDAVACEFLQEALRRADYDVDICTSARDVLKGDLSRYDLVI
SDIRMPDMDGLQLLRRIHQQWPALPVILMTAYGSLESTMEALQLGAWDYI
SKPFSPEAIRNMVKKVLGMRELQRHRSQGSPAEKEEPRFIGSSATMVEFY
KQLVRVADAWASVLIEGESGTGKELTARSLHQLSSRRDKPFVVVHCGAIP
DNLLESELFGYEKGAFTGADHSHRGLLESAEAGTIFLDEITEMSTALQGK
LLRFMQNGEVRHLGGHEVRRIQVRVVAAANRNIDEETASDRFRADLLYRF
VVRLHMPALREHKEDLPQLMESLLKKMGYPTVRISDEAMECLMAYNWPGN
VRELENVLQQTLLLSPFLIILPEHLPERMRLKTPAGGKESALTPLEGAER
DQILQALKTTDWNQSRAAAFLGIDRKTLRARIQRYGFVREESN
>SYN_02484 universal stress protein family
MYKKILAAVNEHLNSEVTARYAMNLAKELHAKFYICFIAEEGMSPHNRHA
AEDAVKRLFDEALELDIDTESIEATGIPVREIGEIVRREKIGMVFASTRR
EDIEKRFYAGTVARSLSLQLPCSVALVRIAHSGRVRPGRILVPVKARIDH
VRERAAFVTHMAKAFGAKVYVFHTPRPIETIFSGEIHLTPPEWEKRMSHD
ISQFMRCLQQQNIEHEGRHLPGKIARNITIEAFAKRHDLIIMGASERSLW
ASLIQGNPVEEVLRETPCDLIILKPRHED
>SYN_02870 histone deacetylase domain protein
MKKARKTGLIFFPAFDWAISPTHPEREERLLYTQDQVFEEGLLDLENIIE
YKPSIASYSDINRVHFCVPDARAVTTESHLIAAGGAITAAEKVMNKEVDN
AFALVRPPGHHAMLVVHGARGFCNVNMEAIMIEYIRHHYGHRRIAVVDTD
CHHGDGTQDIYWNDPDTLCISIHQDGRTLYPGSGFHEEFGGPNALGTTLN
IPLPPRTSDEGFLHVLDKAILPILSEFKPDLIINSAGQDNHFSDPITDMR
FSAQGYAILNDRLSPDIAVLEGGYSIEKALPYVNVGIILAMAGLDYSHVR
EPEYDPSRFRQSEEISSQVAQEAEEIYELWSRRNELRERMIGDAKYMKRR
KGVYYDTDGISEQQETIVRICSDCGGVVMVNSRSDLGNHIFAVTIPWNAC
RECRREGESAYDKAQKKDGYQHIYLQDKDRDLYLVK
>SYN_00226 signal transduction histidine kinase
MAKDLAEILTEYNQQIGRQFAEFLYRGDASNRYKDRPFEELLITTSEVME
ANVAVLLRKDFSKLDAFIAKISKMRLEGGFSLPEVQRAFEIYRTLLVPIL
VKELKGDALLNALQKVNDLMIDTITQFSEYFLNQAEKALFEAKEEAEAAN
RAKSDFLASMSHEIRTPMHAILGMAELLLETPLSPEQQRYVEIFRNAGEN
LLNIINDILDISKVEAGHLELENIEFDLGEIIERTVEALAIRAHGKGLEL
ACHILPDVPVNLIGDPVRLQQILINLVGNAIKFTEKGEVVVHVEKSTELT
GGPETGTEEGGKVELLFSIADTGIGIPQEKIDKMFEKFTQADSSTTRKHG
GTGLGLSISRRLVEMMGGHIRLDSEVGKGTTATFTARFSVQAEGKKLAEI
VEAGVEKLTGLRTFIIDDNATNRMILREILSGWGSCSDEADGGERGIVKM
QKAREAGKPYDLLLLDYQMPGLDGFGVAERIQRNPSLAGIPIVMLTSDLG
RGDPRRFRELGIASFLTKPVKRAELKNAILTTISKTKVAGRKPAPQAPAA
PESHRPLSILLAEDSEDNRLLLMSYLKSRPYRIDIAENGVIALDKFKTGR
YDLVFMDIQMPEMDGYTATREIRKWEREHQLRETPIVALTAYAYKEDRRK
SLDAGCNGHLVKPIKKAVLLEAISEYTEEEAES
>SYN_02544 universal stress protein family
MFRKILYPTDFSDVANKALDYLIKFKEAGTEEVVILHVVDTRSLHIPEVY
SLMDLSLLGEKQEIAARDKADKIAGILANAGIRTAVRIETGIPFKEILRA
ESEEDISLIVIGSHGVSNVKEMLLGSVSEKVVRKARKPVLIVKR
>SYN_02570 sensory box ggdef family protein
MSDIGAGMHAPKGPGMMKDEEKTRKQLIRELAALRGEMSGVIAEKSPDAK
FRILFEHSPEGIFLSDGKLMIDCNDTMVKMLRCSSKEELIDRHPSAFSPR
MQPDGSLSFDKANQLMEEALQKGHLQQEWLCRRFNGEEFPVEILLAVITW
EGQKILYMVWRDITERKRIEDAIRHLAYHDVLTGLPNRILFTDRLVLAIA
QAKRYRKTMAVMMLDLDRFKTINDTAGHHIGDLLLQSVGRRLTHTLREED
TVARLGGDEFMILLPEIKQALSSFRVADKIVSAFKEPFICEGNELSTSAS
IGIAVYPDDGEDMDTLMKHADTAMYQAKSTGRNTYCRFGSDHLPSEDRFL
KTAN
>SYN_02530 two-component response regulator
MATILVVDDDKGMREFLDIMLTREGYDVSCARDAGEGLDRCRKQRFDLII
TDLRMPKIDGIEFLKSVKDVSPESLVILITAYASGETAVRAMKEGAYDYI
EKDFNIEEFTSTIRSALESNGRMQDDAKFIRDIENSVCFGEIIGKSREML
KVYSLIKKVADTTANVLILGESGTGKELVAKAIHENSPRKDMPFVVINCG
GIPENLLESELFGYLKGSFTGAYADKPGLFEIARGGTIFLDEVAELPPVL
QVKLLRVVQEKTFLRIGGTENIRVDVRIISATNRNLEEMVQKGDFREDLY
YRLNVIPISIPPLRERKDDIPVLTKYFIEKYSREFGKGIKNISNYALELL
MDYSFPGNVRELENIIERSVALEHSSIVLPENLMISRENSAAKHETFKIE
NIPDQGLNLNDELARFERAIIGKALEKSKGSKTKAAELLMISFDSLRYRI
EKLGIG
>SYN_01481 adenylate cyclase
MSDRWKALFTVSPIKISLFVILLSLTLFFMDVRFLRFMELKALDLRMLSR
GAVPSCGKVVIAVIDEKSLSELGRWPWPRTTIARLVDALRGYGAKAIGFD
IVFAESENNAGLKDLERIKRELDQAGVNALKLNEIFSGKKNPDDPDAQLA
ASIRRAQNVTLGYFFHTSSKDVSHLSEREIAAKAENISSSRYSMVKSQGM
PDEAAFVHAYGVASNLPELSEAAENSGYFNAFPDIDGSIRWSPLLIKFQD
NYYSSLALSLLLQYLDWPMLSVNMAEFGVESIRIDDLRIPTDESGRLLIN
YLGPAKTFPHYSIGDIISGRLAPELFKDKIVIVGATATGIYDLRVTPFGA
VYPGVEIHATVIDNILRRNFLVQSGWTSFLDACFIILLGLLMGTVIPRLK
ALQGVLVGLIILETFIGANVVIFTRYKIWFNLVYPVMTILLVYLGITVYR
YVTEEREKKKVRGAFQRYLNESVVNEILKDPAKLKLGGDKKNLTVLFSDI
RGFTTISEVLPPEALVRLLNEYLTAMTEIVFKYDGLLDKYIGDAVMAVFG
APLEQPDHALRACNTALDMMNRLKELQKKWEADGWPLVDIGIGVNSGDMV
AGNMGSEMRFDYTVMGDSVNLGSRLEGINKEYGTNIVISQFTHEAVRDVL
CCRELDSVRVKGKKQPIKIYELLGRREDENSWGELIRRFHMALEHYKAAR
WDEAVAAFQSVLAIRPDDFPSLLYIQRCETLRVCPPEAVWDGVFTMTSK
>SYN_01633 nif-specific regulatory protein with sigma 54 interaction domain
MSKHNYEELAALHAIARTLAQPGELRDQLERVLQEMNQRVGMQRGMISLL
DRESGEVWLDVAHGVDIQGMEVSYQPGEGITGKVAQTGRPMAVANLGQET
HFLDRTGARRFLNRSELAFLCVPIIYDNRVVGVLSADKAARQVEDLDREL
AMLSSISELIAKSVHIRALEEENRRLRHMLGRSTVPDSEIIGHSRVMQEV
FGLIAQVADSNTTVLINGETGTGKELVARAIHDRSSRCKGPLIQVNCAAM
PDTLIESELFGHEKGAFTGALHARRGRFEEAHGGTIFLDEVGELSAAAQA
KLLRVIQEKKFQPLGASRVVSVDVRIIAATNRNLEEDVAVGHFRADLYYR
LNVFPIYLPPLRERGSDIILLADYFVLKYNKIMGKSVKRISNAVLEAFLS
HSWPGNVRELENCIERAVLLATGDSIETLHLPPSLQIRSREGEKKESGKF
NAMIESQERAMIVDALKESHGNQSQAARILGTTKRIIQYKIQKFGIDPRR
FNPKHAGSSTISG
>SYN_00568 signal transduction histidine kinase with reciever domain protein
MEIFEQFPLGVYVHFFQHKVRINRMNLFYSLRWKRMLGYTESEVGNTPDE
WDKRVHPEDRKRCQEVLEAHLSGKTPVYESEYRLLCKNGTYKWIMDRGTV
INRTADGKPLRVIGTHADITRRRLMEDELRESRQRLADIINFLPDATLVI
DRESRVISWNQAIEKMTGISAEEMLGKGNYEYALPFYGERRPILIDHALR
PDMQAKKQYTAFYRAGEILFGQSCVSALPSGELHLSASASVLRDSRGEII
AAIECIRDNTELKKLQDRLNRAEKMEGLGRLAGGVAHDLNNVLGVLVGYS
ELLAETVPGDSPLKRYAKNILQSGMRGAAIVQDLLTLARRGVVVSEVINL
NQVIADSIKTPEYEMLKFDHPDVRIRTHLAEGLLNIKGSPIHLSKTVMNL
IVNAAEAVSGCGDVTIRTENRYLDMPVRGYGSIQEGDYAVLSISDTGSGI
SADDLDKIFEPFYTKKVMGKSGTGLGLAVVWGTVKDHNGYIDVHSEEGKG
TTFAIYFPVTSEGRTEAGKVIPPESYAGGGESILVVDDIPEQREMALSML
KRLGYRVDAVPGGEAAVDYLRSQAMDLVVLDMIMPPGMDGLETYERILEI
NPAQKAIIVSGFSRTERVEKAQKLGAGAYVRKPYILENLGLAVRKELDR
>SYN_01292 response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
MGDKKILLVDDEDQILQMLKEAFSLYGYKVKTASSAEEALDVLAKESIMV
MFLDLKLPGMSGLDLCRQIRKDNQIAVIHALTGYSNFFGFLECRSAGFDD
FFTKPVALKALFKAAEEAFEKLERWKVFVYDLA
>SYN_02359 serine phosphatase RsbU, regulator of sigma subunit
MKSGHFPISKHSRGSPMLSNKSIAFKLTLVITLCSTCIFASLLGYNYYRS
RLVLRKELVRNARNLTMASVNRIETVLTAVTKVAEGVARSLENTRPTREE
LSSLLRSTLAENPEIYGCGAAFDPHATGPDSHPYITYFQRDHGRIVYAPD
DTLNYLQKDWYQISRETGKKEWTEPYYEGNVLMATCSVPFYETTDGARRL
KGVAFSNVSLDWLTELVASIKVLKNGYAFLISRYGTIVTHPDRAMIMNVT
IFGFAEAAKDPTLRELGRKMIKGGSDFIPFTNLKGVKCWVYYAPIPSTGW
SLAVVFPETELLDQVKTLSLTGALIGLGGIMLLTMAVVLIARSITFPLKT
LAGATTAIARGDFDVELPPVSTQDEVGKLADAFAAMKSSLKEYIKRLTET
TAAKERIESELRIARDIQRDFLPRTFPPFPDRQEFELYAVMEPAKEVAGD
FYDFFFVDDTHLCFVIADVSGKGVPAALFMAMSLTLIKATARYGLPPEEI
LCRVNNVLARENDSCMFVTAFLGILDTESGEVIYANGGHNPPLHLKHGGG
VAWLARSGSLMVGVMEDAPYRCERILLEPGDCLFLYTDGVNEAINAREEA
FSNDRLERRLRALQGYEIKDVVFGIMADVRAFTGEAPQFDDITMMVIQYR
GE
>SYN_00174 signal transduction histidine kinase with receiver domain
MKGRQPAAELNGQVGEGSRGMNEGGQVRAGRMRDRVVLGRRWMPTEPAED
ETERLREELLETRKRLRDFKALINRSPAAVFLWRVTAGRPVEFVCGNVTQ
FGYTRKEFLDGDVSWTAIIHPDDIACLEREKEECAARGIDKFTREYRIFT
RSGEIRWIEDRTVAIRDERGITTHYQGVLLDVTDRKRLEEMRCNTREELE
RRVAERTAELARVNEELQLDIAMRREAEESRRQLEQMLQQAQKMEAIGTL
AGGIAHDFNNILGGIMGFTELALLDIPEGSPACLNLKQSLKAQHRAIEMV
NQILAFGRQTEGDPIPVKVSTIVKEAVKLLRMSIPAMIDIVLKNDAASDM
VIVDPTRIHQILMNLCTNAAHAMRERGGRLTVSLFNVSIDLEAALAYPEI
LPGLYIELAVEDTGHGIDPQIQDRIFDPFFTTKKPGEGTGMGLAVVYGIV
KDFKGAIDLDSQPGKGTRFRVLIPAIESREEECTTTGSIPRGRERILFVD
DEKCLVRIAEQLLTRLGYKIVASMSSIEALEAFRSRPESFDLVITDLNMP
DMTGIDLSRELLHIRADIPIILCTGFSEQIIEEKARKLGIREFIFKPFIM
STMAQVIRDVLECRE
>SYN_02585 transcrption factor sigma 54 type
MNTITQASALRKAAYCRCGVVFLDKTGHIITLNADFFEETHPNIKKGVLL
PEKLRSLGPGQWTFWDEDWFVQAEGQQKTEVVIFRRIRVADKILGPYGNN
SINEEMVRMVLDNPYEGLSVIDTKGKVTMFSPANEKWFGLESGGGMGLSL
SQLAPGTHLTKVARTGVGERAVVDLHGETKITINLPVRKDNRVIGAFGRI
LFQSPEQLEKLADRVRAMERKVERYETLLDEMRRHRFSFENILTQNPDMQ
RIIEQARRIAASSATVLILGESGTGKELFAQALHEASHRRKGPFVAINCG
AIPHTLIESELFGYEEGAFSGASKKGKPGKFELACDGTLFLDEIGELPID
SQAKLLRVLEERKIDRLGGTAPIAVDFRLVVATNRDLTALANSGKFRSDL
FYRINEFPIEIPPLRQRLDDIPLLAEHFLTKACQQEGLAMPKFSEEAIKV
LMSYEWPGNVRELRSLIRQMAWKFQGMTVELHNLPQAFHKERKVTMSGTL
EEQLARAERNAIETALQTSNGNRALAARMLGIHRTALYKKMNRLGVDGTL
SGHIP
>SYN_01191 transcriptional regulator with sigma 54 interaction domain
MSKQREKTAPRERDTILDSIADGVFSVDDRWRITSFNRAAEKITGVSRED
AVGQRCKDVLKAEICDRGCLLKKTMETGKPVVNRTVYIVNAEGRRLPISI
STALLRDEDDRIIGAVETFRDLSLEEQLRKKIEARYSFEDIISRNHRMHE
LFSILPDIANSTSTVLIEGESGTGKELVARAIHNLSTRKSRPFVAVNCGA
LPDTLLESELFGYKAGAFTDARKDKPGRFKLAEKGTLFLDEIGDVSPAMQ
VRLLRVLQEKTYEPLGSVESVRHDVRIIAATNKKLPDLVREGKFREDLYY
RINIVRLELPPLRERMEDIPLLVDHFIGHFNVLQNKEIAGVTDEALACLM
TYTYPGNIRELENIIERAFILCKSGMIDRIHLPDPVCGISGAAEIPAWES
MSFRDMEAIFLTNVLRRNAWNKSRTARELGIHKSTLFRKLKALGIRSPDK
TQEKS
>SYN_02543 PAS sensory box/GGDEF family protein
MFIDRDSYRRIVDDLYDGLYLVDRNRVIQYWNKAAERISGFTAAEVIGKS
CSDNILTHVDRDGNTLCKGMCPLAMTIADGKTREAEVFLHHKEGYRMPVS
VRVNTLTDADGNVIGGVELFTSRSSSRSIERRIRDLEKKAFYDNLTRLAN
RNCVENELQIRFEEQKRLGVSFGILFMDIDHFKEFNDTYGHDVGDLVLRF
VADTLVKNARPSDLIGRWGGEEFIGILRNVTHENLEILGNRLRVLIENAY
ITLKTEQLHVSISVGATLMLDNDSSDTLLKRADMLLYESKRRGRNCLTIG
>SYN_01476 bacterial regulatory protein, LuxR family
MVIMTGKKEDIEIALQERIKELNCLYGMARLAERHHDSMEDFLMHLVDFL
PLSWKYTEFACAQIIFKGEIFDSRKFGWTEWRQSARIRINGEAVGEVTII
YMEDPPKTDEGPFLKEESALLEGIAQRIGEIALRIMAEKELQENNRQLLL
ERKALEEANAALRAVLSNIESEKKRIYENFHLNIEKVVMPVIHALTPGIE
KSKQKYLDMLMTNLEEITSPFTSRIFNHYRALTPTEVDICNMIRNGLRTK
EIARLRGVSAATISRHREHIRRKLKIANQQINLTTYLQSLPAQDTSSPPP
CV
>SYN_00526 calcineurin-like phosphoesterase
MGRIFAVGDIHGCLDQLKEMISLLDIDRNQDTLVFIGDYIDRGPDSKGVL
DFILELKKEMKTVVCLRGNHEEMFLDFYLEQKNGPLFLLNGGRNTLSSYG
MKKTDQGYAARLPDAHLHFLKTLPLYFEAGNFLFVHAGLRPGIPLKQQDP
HDLLWIRDEFFLSHADFPRVVVFGHTPFPRPFLMENKIGIDTGAVYGGQL
TCVRLPDGRFYQV
>SYN_01465 signal transduction histidine kinase
MNDIASLQKSFEGFNQATLHIQQAFASLEKKFDSLNLELEEKNRELLRTL
SEKEEMKSYLQNILESLTNGVIVTNPEDEIQVFNSASELFSGKPQDEAVG
RHIRILFEDMPSNDWMDIFLNKNFRKGRVSRLIYKNRVLEITSSFISSGG
KILGTVFVLRDVTRIEKLESMAKRSEKFTALGEMAANIAHEIRNPLGSIE
LYASLLMKESKNDRDQNRISRIISSVKKMDNKISNLLLFTKNRKLILKRI
SLHHFLNEILGSCEPLIDQEKIFINTTYADYEPWIEGDAEMLKQVFFNLI
LNALQSLDPEGGTIDFETICPHSGQDMETDESYIEVKIRDSGIGIPREYL
NRIFDPFFTTKEEESGLGLTIVHNIIEMHRGVIHVESVEQEGTVFHVLLP
LISEQGTMKTKVGWK
>SYN_02576 signal transduction histidine kinase
MKVTGTVSNRAGEILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRF
LSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDV
VRSLECGADDFITKPCKDVVLASHVKRLLSGVKRTEERYSRESITLAFGN
SSYHITADLHKTANLLLSSYETAIEKNRDLIAAQQELRILNECLEHRVEA
RTAELRAEIARREAAEQTLRQSEQQLQHILNHIHTGFLVINAQTKRIVEV
NASAAEMIGLPRETILGECCCRFIFPDLSGCPIEFPERVGSQSEHLLRTA
SGNLLPILRTASIMTLHGQPHIVESFVNISAQKQAEEERLALEKQLFRAQ
KMEAIGTLAGGIAHDFNNILGAIIGYAEITLHGLYDSPWRPKLERIIRIS
ERAKDLVQQILTFSRHSDHEHKPVQPALLIKESLKLLRSSLPATIEIRQD
IAATKSTIMADPTRIHQIMMNLCTNAAHAMRETGGVLEVSLKNRDIGAAE
IVPDFQLEPGSYVVLTIRDTGQGIPPDIQNRIFEPFFTTKSPGEGTGLGL
SVVYGIVKKYNGMVTVDSVPRKGATFQVFLPRVDDNLTFIQEEEEILPCG
SEHILFVDDETALVEMGQETLRTLGYRVTGICNSLEALETFRRTPSLFDL
IITDMTMPQMTGTVLSRHLLQIRGDIPIILCTGYSEFITEKEAKELGIRE
FIMKPLFMKELATVIRRVLDSVPAV
>SYN_00566 sensory transduction protein with PAS domain
MIATFWRQVSVIPSCPEGMRNSGSRSPRSIPKETSVICWMFCERENSMSE
EFENREQLLDEISSLRQRVKELEVSVASHKQSEERYRRLYDRMLHDEGMD
GYAAINMDGYFRVSNAAFMKMVGYTAEELRGMIYLDLTPEKWRETERVII
QEQVLSENFSQVYEKELRRKDGSVFPVELRTYLIRSRNGQPSGMWAFVRD
ITVRKQSENILVAQRDLSLALAGTKSLQDTLQLCLDTAIQASGFDSGGIY
ILDSRKKSLDLACVRNLSDEFVDSINHVPADSERARVVMAGSPCYLEGAD
CDGVLKQEHFVREGIKSCSIIPISSQERIIACLNVASHVLEKIPPYARNA
LESIAGQIGLCIQKAQAEEELRDSEKKYRQLVDFLPIIVFECDKRGNITS
TNRAAFKAFGYTQEDLGPGFNALQVIVPEEKERALHNIQRRINDEDVDTI
EYTAVRKDGTTFPVRILSAPIIRNNKAVGLRGAIIDMTEIKLARKALQES
EERWQFALEGSGDGVWDWNKQTGEVFYGSSD
>SYN_01358 hypothetical membrane protein
MRSYDLTDFLTTSALLNYQLSAKQLNWGSIMTVVLEGKQIADHDQEILLN
VFDYLSKVYGKMKRALGPLSVLHPLRATALLSHASKEVALLDVITCLLHD
TFEDFKPSQFKDSDWIKLDNTFQAFLSELPEDHQKRLKQQLQWLTKEPSE
TYYHYIGRLLDQAGETSEVVRVKLADRLDNTFDMRIELQDPLLGVDFFEI
IFQMAFTNTCRGYRPDRPHQPTVIMNGADRLYQLFKNIVLMSLIRQKKAG
AGDPVTQELFEALAKASMKEAQRIALHVFGYHEPDVAKFRKLLMETMVYS
QSGGFDTVTLPNEASRLNGLLMTVFDQPKREARKKQLVALYRDKAFMIQV
AISFVIIFLNFLNDPDYFIHGISANGVRPES
>SYN_02339 transcriptional regulator GerE family
MFQYSHLENRLIRVNAAYAKMLGYESPEEMISTITDVTSQIHTDPQNYIN
TLATLEERDWFYAEQPLLQKDGSIIIAKVAVRKVLKPDGTIDYTDGFVED
ITEQRRLEETEKKHLDEITDLYENAPCGYHSLAEDGTIIRINNTELRWLG
YSRDEVIGKMKITDLLTPEGIEAFQQDFSLLKERGWVRDVEDKWIRKDGS
VLDVIVNTTAIFDKNGNYLMNRCSAFDNTERKKAEEALERSEKLYRNLFE
NASIGMLQISLPENGILRVNKAFASMLGYDSPEDLMFNVTDPATQIQVDP
ANHDKALRILEQQNWIYSEQPCRRKDGSIMFANVAARKVSKQNDVDEYVE
AIVEDITERKRAEEELRERIKELNCLYSIANVIEKADTIEEIFRNTADLM
PSGFPYPEHMCARITYEDLEFKTANFQETPWQISANINVNGRLAGTVNVH
YLKETSQRDGGPFLKEERDLIDAIADRLGKVAERKQMEEALIKNERELSI
KAQNLADVNTTMKVLLNTMENDQEKLKERFLDNIKAQVLPYLKKLKNTSL
DDTQKGLIKIAETNLDEIASPFVQKLTSNYLNLTKTEIQIASLVREGMTS
KEIAELLNSNKRVIDFHRENIRKKLGLNNKKGSLAILLRSYS
>SYN_00248 cyclic nucleotide-binding domain protein
MDKVLEIIGSIPLFNGLSEQQLGEIRGIARDRFYDKGKEIFAEGDEGGGF
YIVASGQVKVFKLSPEGKEHILHIYGPGHSFGEVPVFSGERFPASAETLL
KSHLLFFPRTDFVALLSGNPSLCMNLLADLSLRLRQFTIQIENLTLKEVP
GRLASYLLTLSDEEGQGNSLSLNISKGQLAGLLGTIPETLSRIFLKMNNA
GLIEVKGKEITILDRNGLQALAETGKFGG
>SYN_01019 two-component response regulator
MCVNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPE
IIIMDISMPDMNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGAS
GYLLKDCAFEELVNAIQTVLSNHTYLSPTIADIVVKNYVHKAAGTSVVVS
SELTPRERELLQLLAEGLSAKQIAANLHVSVKTVETHRRNITQKLGVGSV
AELIKYAIREGLTTVGT
>SYN_01921 sigma-54-dependent transcriptional activator
MFATNKDLSKMIKEGSFREDLFYRISVVPITIPPLRERGEDILLLARHYV
EEFNKKFMKKVGGFSREAEQILMAYSWPGNVRELKNILERVMILQNMGTT
IMPENLPAEMRASVEKERFQIHVDDFLPDLSSEGMDYTALTENITRTIKS
RILSRALEMSHGKKMEAAKLLRISRYKLIREQKKNGMV
>SYN_00740 histone deacetylase family protein
MKKTGVVKDERYMNHLTGPGHPESPRRLEVIYDMLEDRDMQGRFQDVPAR
EARMDELHLIHLPDYVNRVASTARMEYSCLDPDTDTSPGSYKAALLAAGG
LCEAISMVASGKLDNAFALVRPPGHHAEADRSKGFCLFNNVAIGARYAQT
ALHLQRILIIDWDLHHGNGTQHSFETDPSILYFSTHQYPYFPGTGACDEV
GRRTGLGFTVNVPLSRGYGDGEYAAIFEKILKSIAPEFSPDLILVSAGFD
IYGGDPLGGMRVSPKGFAGLTRLIVDIAVSCCSGKVVLTLEGGYDLTGLR
DSVKAVLKELAGLSHTDYADMALQANQAAVDRALKPVLQVNRNYWKGLTP
>SYN_01222 sensory transduction protein PAS domain
MRAPSKLNASQEMFRDLYDFAPVGYLSLNRGGAICRINSSGAGLLGMERI
LLINRRFASFVADEDRPIFDALLAGIFESKEKAACEVTLLNVEGSQIIVM
IEAMLSKDEKECHVVLEDITERKKMDVALRKSERKYRTIFENTGTPMVIA
DENTIIHEINSEFEHLFGYSRNELVGCSWEKLVLKEDLERLMGYHEQRSI
DPEAGPRNY
>SYN_01090 transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
MQKEAEIKGTGTQGQSPLSALEPFSMNRKPTYEELEKRVRVLEKESLKYT
QTENRLNETLQRLNFHIDNAPLAVVEFNNRFQITYWSNQAEKIFGWNAEE
VMGKRIDQLKWVYKDDMHHVAELSAEMLASRRTSNIHINRNYRKDGSVII
CEWYNSVLLNSKGKLISIQSMARDVTEQHRLEAELAKAFDEIKRLKDQLE
AENIYLRDEIKLKEGFGEIIGASDVIKSTIHKIRQVAPSKTTVLFAGETG
TGKGIFARFLHRESDRRDRPFVNVNCASLPANLIESELFGREKGAYTGST
ARQIGRFELANNGTIFLDEIGEVPMELQAKLLKVIEEGEFERIGSPHPIK
VDVRIIAATNRDLQEEIKKGRFRQDLYFRLNIFPINIPPLRDRKGDIPLL
VKAFVAKFSKSHNRDIKRIPAKIMESLKNYAWPGNVRELINVMERAVIVS
EGSELQLAEKIDAIPLDSSIRGDESFSTGSGETLADAEREHILKALQQTG
WRIEGPRGAAQILDLQPNTLRARMKKLGIKRPGTP
>SYN_01985 universal stress family protein N
MSSVSIHAVLIPLDGSSFSQRAVAYGIYVAKKMNIQLIGIHARTRGDSSA
EETFIEIFLEDCRRFGISMELRQTTDLSSAAILEATADKETGLFLIPRPD
RLELQSTQNKPAHLALPGAPYTLMVIPPEFREIESMGLIYNGCSEGDHSL
DLAVSLSRQASWPLTILLPSEDPFRIDSLNRQLEDYFDQLTGEPLIDWDT
VVLSGQQGEAAFRFLLDGSIELLVMSRPDLDSSMVMLLNKSPIPVIVTR
>SYN_02810 carbon storage regulator
MLILTRKLGESIVIGDQIQITLLDIKGKHVRIGVNAPKGIAVHRGEVYEM
IQDENKKAFESDVKNSEMLSALWAQVKIL
>SYN_01181 transcriptional regulator with sigma 54 interaction domain
MSKDIEDQTQIILDSIADGVFTVDSEWKITSFNRAAEKITGIAREEAIGK
QCREVFRAGICENHCFLRHTVESGQPVVNQSIFILNARGERIPVSISTAL
LKNREKQVIGGVETFRDLSLVEDLRKELYNRRSFHDIISKNKEMHRLFHI
VEQLSESDATVILVGESGTGKELFAKAIHYESSRRDGPIITINCGALPDN
LLESELFGYKAGAFTDAKRDKPGRITLAHGGTLFLDEIGDISQAMQVRLL
RVLQEKVFEPLGGTKSEKVDVRIIAATNKDLEKLVKEGIFREDFYYRINV
VKLLLPPLRDRKEDIPLLSEHFIRKLNRRKGTDILGLQPEALAILMAYDY
PGNIRELENMIEYAMVVCKNSLIGIEHLPDYLIQSLDHGSQKSFLPKQKQ
ISLKGHEREFLYNALAENNWNRKRTAAQLGIHPTTLWRKLRRLNIELPEQ
DGRHK
>SYN_00430 protein-glutamate methylesterase
MSSNDADKMIKVLIVEDSPVVRELLSHILHSDPQIRVVGVAESGEEALKE
VVRLRPDLITMDVNLPRMDGFETTRRIMEEIPTPIIIVSAAWVSTEVEKT
FRALEAGALAVLEKPSIAARDYDIRARDLIRAVKAMSEVKVIRRWSRSPR
IEPAPPASGEPDIGKITKRFEVVAMGASTGGPTVLKQILSDLPDNFTIPI
LIVQHMTQGFIPGFVDWLSRAANYPVSVAVHGEEIRPGHAYVAPDGLHMG
VNALGKIILTKGEPENGLCPSVSYLFRSVYRAYGENAVGVLLTGMGKDGA
YELKVMKDCGMITIAQNKETSVVYGMPGEAIGMNAASYVLPPEKIARVLV
KLAGSVAP
>SYN_01028 bacterial regulatory protein, LuxR family
MQNMSKDSQGVVTQIEDQAVKDQFDLDGTIGGATRLSDERFFMTFELNPV
PMMLKSLSVPSDMQVNESFLRMIGYQRTDVADVQSVLSRIYPSDSERASF
DEKISREGSFREYPILIQTRSGEVLETLVSTETVRAQDDSFALLLFHDMT
ERNRTATALKNRETELETSIRRLEEMNAALKSLLKHRDQDKREMEERFLS
NVKELVLPYIQKLKETELAGLQETFVEIAESNLNDIMSPFLQKITSRYRN
FTPKEIQVASLIKEGKRTKEIAQILGISKSAIDLHRNSIRNKLGLINKKT
NLRSYLMSLS
>SYN_00943 nitrogen regulatory IIA protein
MKITDLLKKDFIIEELVSTGKQEVLEELSRSFQKGNVKFNLDAMIKVLLE
REKLGSTGIGDHIAIPHGKLNGLDDLIVAFGRSSRGIDFDAMDGKPVNLF
FLLMAPEHSTGQHLKALAKISRMLKDHHFRKSLMETKSKDELYQIIADKD
DQT
>SYN_00964 protein-glutamate methylesterase CheB
MSKIKVLVVDDSAIVRKIFTEELSKYPDIEVVGSAPDPFVARDKIVHLKP
DVITLDIEMPRMDGLTFLKKLMRHYPLPAIIVSSLTPKGGKLTLEAMDIG
AVDAIAKPGSSYSVGDMSGQLVEKIRAASGARVVRKSTQEMFQPGSRLSI
RSLAETSNKVIAIGASTGGTEALKNVLSRMPPDSPGILVVQHMPANFTTA
FAERLNSLCQIGVKEAADNDSVTPGTALIAPGNYHMILRRSGARYYVQIK
MGPMVHHQRPAVDVLFKSTAKYAGANAIGVILTGMGADGAAGLLEMKQMG
AGTIAQNEKSCIVYGMPKEAVKIGAVDKIVHLDSIADEIVRMV
>SYN_02258 cheY-like receiver domain protein
MRRSAGVLKMSSPKGSGTGSDRDLLVSDNAGVSENLGPARLLKGEETILL
VDDEDVNIEVMSEILEMLGYRVFSAENGQEALRIYREKWREIDLVILDMI
MPDLKGGDVFDLMREMNPRARVILSTGYGWKGQAADIMSRGCRAFIKKPF
HIEELSRKVRQVLDETE
>SYN_01122 transcriptional regulator, sigma-54-dependent
MKGVAKCRKHGNRKEGKVDRALASPVSHKKSGMKKWADNVVPIRDSRPFS
AGYHDLVDNARIGLFRTNLKGDILYVNKCGLAMLGLENLDEAKPGDALAW
YRNPEDRKTFLERLGKTGRIDQFEAECVTAKRESIVLLVNAVLEGDVITG
AMIDISALKHKHEALIRREKRLADAQRIAHLGCWDWDIVTGELFWSDEVY
RIFGLRPQEFGATYEDFLARIHPDDRRTVEERVNLSLADPGIPYSVSHRI
LLPDGAECKVFEKGEVTFDGFGKPVRMIGTVHPLIMRKQTEEELIRAYEE
IQALKEKLEAENTYLREEVGLQHGAGEIIGDSEAIKNTMHRALQVARTSV
TVLLTGETGTGKGIFAHFLHQNSGRADKPFVHVNCAGLPHNLIESELFGR
EKGAFTGSTARQIGRFELAHGGTIFLDEIGELPLELQAKLLRVIEDGKFE
RLGSPHSIKVDARIITSTNRNLEDEISEGRFREDLFFRLSVFPIIIPPLR
ERKADIPLLVEFFTHKCSKVHRKNIRHIPAQTMKSLENYGWPGNVRELMN
VIERAVIVTQGTELQLAGQLSAHSIRSRKERGIEGSEKPAFKGLNGVERR
HILETLQEAGWKIEGPGGAAQRLEMNPSTLRTRMKKLQIKRPETL
>SYN_02005 response regulator protein with GGDEF domain
MENTAQKETRITTSIEQEELRGISRSVAEIEWLLLILVLLYHVFGGTDVK
DAPSIVLSLVMYAAFVMGFRYARFLKQESRWKLAVETWVMTGFVTWALWH
TGKLESPLLNSYLLVIITSALALGKLTTLLELALIGTCFIFLGSHSSINE
LFSLKYVGALFARFAPFVLVAYITTMFASDIRYGLNKIKLMSETDELTGI
YNRRGLAIIADRLFGHTVRYNRPLSLLAIDSDNMKRVNDDYGHKAGDQLL
VTLVNTIQAQLRHSDILARQGGDEFVVLLPETPSTGALDVAERIRKAVEN
TPLVLDGKIVRTTVSIGVASYPSEGHSLDVLLAQADFKMYEAKLGGRNKV
VQCSV
>SYN_00229 anti-sigma B factor antagonist
MQLHQTKNGDVLIVKPLEKRIDAATATEFKEKMSNWIGAGNKRIVLNLTE
VDFIDSSGLGAIVSSLKKIGTEGDLVICAVKETVMSLFRLTRMNRVFDIF
PSEDEAVRSLSGKA
>SYN_03611 GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MSIYKGSASTLLHSTGASNSMILKAIEFAVQAHAGQYRKITRIPYIFHPL
QVADILTECRCNEEVITAGILHDTVEDAPVSLEEIRENFGNDVAALVEAA
SEPDKAVSWEERKHHTLSALKTAPMDVLLLSCADKLDNIRSIQKDSARLG
ELIWSQFNRGKEKQAWYYHNLASIFREKADGEPGNSLFESFSGDVHLVFP
AREYAARQFV
>SYN_00054 phosphotyrosine protein phosphatase
MSKIKVLFLCTGNSARSQMAEALLRHLAGNTFEVFSAGLDPKGINPLTTR
VMEEIGIPLEGHYAKHVNEYMGKIHFGYLITVCSDAEQRCPSTFPGISHR
LHWAFDDPGAFVGTAEENIKKFREIRDQIDLRIRLWLEERKSEGAI
>SYN_00776 signal transduction histidine kinase
MMMKNPQTYRLPLLSESCSVRSSQQPALNSVQDEIHPLLKKAFSENIRSR
EHGRKLRKNLPSDENLLNRYKVFFDSAPVGCIIINEKGYIRHINGTGAAM
LNSSDINQLQGKSFFRFISREDRLMFLAHLKSCSESGTNENIEVHLRTWN
RQPHIPVQIHTVFHDADPGSKPFFLSVITNISEHKQMEEALRRSEACYRH
IVEDHTEMICSCLRNWKITFVNEAMCNVFGTPRDEFIGMPLVKFIDKQDR
KKVKELLASLNSSNPIKTVEHRVVMPDGQSRWHRWIHRVIYNRKGLFVEY
QSAGRDITEQKETQEALLKAHSELEQKVGERTAELARINETLREEIAEHK
ETQRKFLASHEQLRALTSDLITTEERERRLIATELHDHIGQTLAVTRIKL
EMLHALASYSGFAEALEEIQGFVKQAIQETRSLMTKLSPPVFYELGLTAA
LEWLVQHFDEQHNLKIVYKGMSNHLSLKQDIQILLLQATRELLMNVVKHA
GVEKAEVILKANRKQIQIDVIDHGSGFDVSQIGTPVDWRGGFGIFSIHER
LKNLGGELQIRSKRGKGTHFTLIAPHNTRDGN
>SYN_00969 chemotaxis protein that stimulates methylation of MCP proteins
MGDVIVSISDFRVSNNVGDILVTYALGSCIAVAIYDPKVKVGGLLHYMLP
DSSLDVDKAKTTPGMFADTGIPLLFKACYSLGAQKKSMIVKVAGGASILD
DTNFFRIGQKNIMMARKMFWKNNVLINGEDTGSNCNRTVRLEIKTGKVFV
KSSGGPLREL
>SYN_02531 signal transduction histidine kinase
MKSHENSSMREVILLERLRWLIVCRVAIATFLLVIIIFIDLKQTSLYPEI
RFPSFYSLILTTYIISFIYVFLLKVVKNSHLHAYIQMVCDVFLITLLVHI
TGGVSSIYSVLYPMVIIYTVLFAERKGGLIVATACSLSYGLLLNLEYFAV
IAPQYQSIIPEVQRNAGYLYSRIFIHALSFYIVAFLASFVIEQEKTARTL
LAEKENAFDQLDLLHQSIIESVDAGILTIDMEDRIKSFNRAAVDITGLSV
ADVLNRSIHEVFPGYASLFARYSCIQTGKSSGRRMEMNIRNRNNEELILG
CSLSRLRGSQGEHIGEILIFQDLTSIKKIEAAYEKSRRFAFIGEMAAGLA
HEIRNPLAAISGSIHMLKKDLKLDPTDERLMKIILRGKDQLENFMKDFLL
LAKPAAGEKEWMNLNALIDEILESLVYIPDWSENITVEKNYPEPSLLYAN
KREMQHVIWNLILNALQAMPRGGRLHIRTTPVVVMNERQCVQLDIEDSGE
GISREDMNRIFEPFFTTKERGTGLGLAVVGKIIENYSGTITITSEKEKGT
RLRVCLPKNQELAETETIFTKDVRVA
>SYN_00359 DNA polymerase V subunit
MKEKRTIPSVKKQIAGFFRERKRMPTYEEMVALLGVRSKSVVHFWINKLV
EAKILEKDRGGHLAWKERPFSIPMVGEVAAGFPSPEEEELRDILSLDEYL
VARPDASFLLQVSGDSMTGAGILPGDLVIVEKGREPKNGDVVIAEVDGEW
TMKTFRKEKGEVYLEAANPKYPIIRPRQELKLAGVVTGVVRKYHL
>SYN_02092 fog:ggdef domain membrane protein
MTSMKLTISRKLILTHFAMALLAVLAVVYALDRFRTLNDLAFKIIHEDFY
LINTSKSMIDTLLAQENAEKKYLVLRDPSFEKIFRQRGREFEGALKALQR
RPFAVSKANPERLKELHNRYQSLFQRERRLISEDRIEEAFTLSEKESRLL
IERMASQLRSLQQNAEKEMDFRMNTINRLGTTASRITLVLTAVTLIIGLL
LAMATTINISRPLKKLEKATERIGEGNFDYRPDIARHDEIGSLAQAFGYM
AERLKELEALHLDASPLTGLPGNLAIEKEIGRRLSEKHLFSLCHVDLDNF
KPFADHYGYAWGSEVIKEVGLMLVAALGRRPDLENDVFLGHIGGDDFVII
ADPRRAEEISGEMVRVFDEQITRFYSEKDRNKGFIIARDRQGIYRKYPLM
TITIAIVTDDGQRFANPLVMAKRAATLKEYAKAMPGSNYIKEEDFEKEAG
SGAESAPSFKCS
>SYN_01430 gerE transcriptional regulator
MNRDERIQQEKITEYDVLYQQFFDKESPFPVDQDSADILKKQADALREQA
ELLDLAEDLIMVLDMEHRILFWNRGAEKKYGWSRGDVRGENVHYLLNTRF
PQCLKEIEKTLIACGRWEGELIQARRDGCPILVESRWTLRCNERGKPLAI
LEINNDISQRKHAEAMLKKTLEELEGRIQERTADLQKVNAELHEEIVERK
RMEEVLKKQQMELKIKTKNLEELNAALKVLLKKREEDKNELEENVLSNVK
NMVLPYVKKIRMTALDATQLNYINILETNLNEITSSFHHKLTSRSLNLTP
REVQVAALIKDGRTTKEIAELMNVCPGAVALHRNHIRKKLGLNKKKVNLA
SHLSSLP
>SYN_00525 predicted phosphohydrolase
MNSGGYMAIPPGAILPESLPEFKIFMRNREGKYVLWAADGNRVTVAQLAK
LSESGVQDVFVDIEESFKYEQYLEANLGKILDNQGITVDRKAAIFSRVST
NVVKAAFETSLKSGAMGMETLQRTQKMIENAMKFITDSNSLPALAKMIGH
DYETYEHAMKVTWWTVAFISENPEILTYCQKDEISDAEQISETLRSCGVC
ALLHDIGKAYVPQEVINKNGPLTEIEWEIMKRHPLSGLAMLLDSELPAFV
KKAIVQHHEDFDGGGYPMNLEGTNITVLARVLRIMDVFDAMTSRRPYKDP
LSPMKVIQIMIGTPSHPEDNAEPAQDPRDRGMGRCFDHELLGKFIIFIGN
VKLD
>SYN_01901 GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase
MGRDTQVLACGSLFIEKIENTYTAKDANLLKKAYAFSRQRESDCDSSSFK
AAELLIEQGADGETVACALVAPHFWQGRVKPEEIREHVSQDVADTLAYLK
QPFSLRIDTEIHRRKDINALLVSMSETPRAAILLIVFRLIELETTLESQG
KNPCHMAQETLHFYVPIADRLSLGEMRRRLEDVCFRILHPFQYEKLKQDV
TPIQSEDEKCLEILIEGVKRLLDKNRIHAEVHGRAKSLYSIHLKMTLKGT
ALEDIMDRIGLRIIVSSVPECYAVLGLLHTHFKPIPGTFDDYIGLPKDNG
YQSLHTCVYPMREVTHKPIEFQVRTELMHMEAEHGSAAHWLYKSAVAMGK
DSLKNQWLKGLVRRHDQAKSTDAFIELLRRQVCEDHMVVFGKGGRITRLP
DKATVLEYLDAANFFASRSSVVKVNGKLASLDQTLRDGDSIEIVDCEDSA
SPGTVVDDMGDIIGQHKASPMNTEGCKVWATAQGSILRHKEENSHASTEG
P
>SYN_01337 dnaK suppressor protein
MCIKPFCWKFCRLRHRQYLFKVIGMVREMALSHDKLEFFRMLLTQKINEL
LEDAGKTVADMTDSKENYPDPTDRASLESDRNFELRMRDRERKLIAKMQE
AIKRIDEGEFGLCEVCGGPISEKRLMARPVTTLCIDCKTKQEKLEKLKGE
>SYN_02721 HD domain / HAMP domain protein
MHLHFKSVFLHSMMPFLRRSGRLIHAALNQAKGRFRSASLRFKIALFVVL
LLTATSFILCITTVTIMNNYILNEITKRGESISKSIAASAGYNFLSKDIL
GMDNLVFKAQSSNNDVEYAAIVAPDGKVVVHSDLAMRGQTLRDDEGRWIR
SGEEGTTVRDLTNSAGSIFEISCPIIFMNKVLGTVLIGINKSVFQEAQAQ
VYRRIVTVFGIVLVFGVVASTFLVSFLIKPIRELSAGVDELKQGISKKPL
KIYSHDELGKLTANFNEMSKVIADQQGQMNRYTRDLEKAYISIVKVASAA
IDARDSYTRGHSDRVSDFSLLIGRKIGLPGEELENLRVACLFHDIGKIKT
PDSILLKPGKLTASEHKEMMRHPDYGVAILDKAPTLRKYIPAIRHHHERH
DGKGYPDRLPGEHIPLLASIIAVADTFDAMTTDRPYRKALSHKEALQEIM
RVAGTQLHPDLVEIFVGIMEKRVRDTVWFIGRTG
>SYN_01373 Hydrogenase transcriptional regulatory protein
MEKILLVDDEQFVLDGLKRQLRRKYAIHTADGGEKGLQLIQSDGPFAVVV
SDMRMPEMNGIEFLTQVRRVAPDSIRIMLTGYADQKTAINAINEGAIFRF
LTKPCSLENLTVALDAALDQYRLITAEKELLEKTLKGSIKVLVDILSLSA
PAAFSQATRLRKYAAQIVARLEFPDSWQYEIAALLSSIGFVNIPPETITK
HLIGEKLTGREQEMIDAVPETAGMLLANIPRLSAVALMINRQNTPCSEPT
AFKNGDFHEAVRIGANLLKVLTDFDILLIRNYEPEEAIRIMSERIGLYDR
TLLNMLAILDLPRRDQGVRNIRIDDLREGMIIDADIRNTHGILVVPKGYE
VNESTCQRLKNFLIRQTGAETVRVLMPVYAEEESQ
>SYN_01077 sensor proteinLuxQ
MQRIRSMTVKIPFEEMFKKESLFRELFESSGNALILLESGIFRHCNLRAL
RLFGFDDREELLHTPPSKIFPEAHSAVMKSDKAWSDQLRNASETGSAHFE
TLCQRRSGEQFAAEVLISALSYEGGRILQVSVCDISARRRTEEALLESHK
QFKGIIDFFPDAVLAIDTEGKVIAWNRAMEQMTGAPAGEVIGRGNYEHGF
QIYGTRRPILADLVLNPQEDIERAYPRFYRKGNYLISDTSSSKLSDTLGK
DYFTSVAATPLYDDEGKIIGAIESIRDISDRRLAERALAESQRRFKDIID
FFPDAILAVDIEGRVVTWNHAMEQMTGIPAEEMLGKGNYEYALPFYGTRR
PILIDLAMRPQEEIEHHYVSIHREGNRLLGETYIANLHGGNIFLSGTATA
LYDSKGRMIGAIESLRDISDRKATEVALQQAKEAADAANRSKSAFLANMS
HELRTPLNAIIGYSELLQEEAEEAGVNHFISALDRIHSAGKHLLGLINDI
LDLSKIEASKIELYPETFSVSEMIESIVKIADPLVKKNGNILIVKGCETG
GEMHADLTRLRQCLFNLLSNAAKFTTSGVITLTVSRTQEAEQEWMNFSLH
DTGIGMTPQQMERLFQTFTQADSSTTRKFGGTGLGLTITRNFCRLMGGDI
TVESEYGKGSLFTIRIPAVTAAGPAEAEEMPATDPLIDPAGANERTVLVI
DDDPAVRDLLQRFLSREGYSVACAAGGEEGLRLARELHPEAITLDVAMPH
MDGWTVLSALKTDRETADIPVIMLTIVDEKNLGYALGATEYLLKPLDKER
LLIVLKKCTPDAGRLVLVVEDDEATRSYLRRILTQGGWNVVEAENGLTGL
ECLREHRQENLPQIILLDLMMPEMDGFQFIHALRSRDEWRVIPVIVLTAK
NLTFEEKRLLEGCVAKILQKGSLSREELLREVSGRLMELKQDGKQESQNG
SIRSK
>SYN_01078 response regulator receiver domain
MKKEWSPMAKLLIVEDNEMNRDMLTRRLERKGFTTVVAVDGVEGIAMARS
EAPDLILMDMSLPVLDGWEATRRLKAAQETRTIPIIALTAHAMESDRERA
LRAGCDEYDSKPIEFPRLLEKIAALLDSSGGKGYD
>SYN_02361 HD-GYP domain protein
MKSLLSRLQPGLRKLTEKQLTRNKRLVEIGIALTTEKNLDRLFEKILEEA
RELTNADAGTLYLVSDEEPLLNFALIQNDTLGIYMGGTGAKISWPPVRLR
NDDDTPNYANVSAYAALSGEVVNIPDVYNAEGFNFEGTRHYDIETGYRSK
SMLVIPMRNHENDIIGVLQLLNAKDPLKGEVISFSEECVDLTKSLASQAA
VALSNRRLVTGLENLLEAFTRTIATAIDEKSPFTGGHVRRVTELTMRIAH
KINEQTEGPFAQLSFSEDDLNELRFAAWLHDLGKITTPEYIIDKSTKLQT
IYDRIVALKTRFELAKRDSESNAPDWVSSEEITGYGASENCGLKMEVLDE
DFQFIAEVNAGLEYLTDENLARLKNISRKKWKFDNEWRPLLDEEELAYLS
VRRGNLTNEERQIMNNHAEVTYKLLSQLPFPKKMRNVAVHAAAHHEKLDG
TGYPFGLRGSEISLQSRIIAIADIFEALTAKDRPYKKEKSISEAREIMEQ
MVRDSHIDGDIFNLFVKEKIDLEYAKKELCSRPDLIGLES
>SYN_00962 chemotaxis protein
MDKSIRILIVDDFATMRKVIRNLLKQVGYENIVEAEDGAIALRTLKAQKV
DFVISDWNMPNMSGLELLKAVRADEELNATPFLMVTAEALQENVIAAVKA
GVSNYIVKPFTAEVLNSKIEKILGSL
>SYN_02718 HD domain family protein
MISQNSCQINESDLKNLKDWFYRYVRSFYSSDSIIQQAILLKEKHSLRVC
NEILNIGKKLDLSHNALRLAEVMALFHDIGRFQQFVRYQTFVDQKSENHG
ELGVRILKQEKALAALDRDARELILKAISYHNRLTIPENESPICTYFSRL
LRDADKLDIYYVVTTCYNSNGTERKAAVELDLPDTPEVSGEILISLIEEK
MISLHQLKSLNDFKLLQMAWVYDINYLPTFRMIYERNYLRKIRDTLPGTE
EIEQVYCKLISFLKAKL
>SYN_00061 phosphate regulon sensor protein
MKPKLFLRILFSYFAVILLVAVIVGFFFTEQVRRNETWKIEESLLNYARL
TALLPLPEMADQIGHLEKVSEARVTVIDAGGHVLADSQVDAPRMEDHMNR
PEVQEARIKGSGKAIRQSHTLQVDMLYVALALRDGESIRGYVRMARSLLE
VEHAVDRMYGSLYRAIGFALVPALLLAFLYTWKISRPVLEMRDYTRAIRR
GELPGTLLVDSADELGQVAEDINYLVTEYREKIRLAHEEKGKLESALASM
VEGVVILDSRNRIESCNQAIEAILERPETEIREKTLLEAFLNADLQNALD
RFRMERKPVLQEIRLGRKDPRVVDVSISAIKDLPDGVEKTMLVFHDVTRL
KKLEQIRTDFVANVTHEIKTPLTAIIGFLQTLLDGALDDRETARKFLQTI
ATNAERLSRLVDDLLTLSSIELNETSLHLEPLSVDVLIRSILPMVNADAK
AKNILLNVDLPEAFLNILADRDRAAQILMNVLHNAVKFTPAGGIVTVSGS
EEEKGNFVIIQVVDTGIGIPPREIPRLGERFYRVDKARSRELGGTGLGLS
IVKHLMAAHGGKMRIESTPGKGTIVSLFFSRAG
>SYN_00942 serine kinase of the HPr protein, regulates carbohydrate metabolism
MVLVTLEKALTFQELLANGVARLGIRQYAGGIGTGEPLIRFCSTGLNNPA
DLPFLTLLNTICIISLRSPLFFEGELSVSLQLSRYFSGIHPPVNSCLALT
DTGHIPEFLIHSLGNSQMFLFASIYDEHLLESRLIGLIREKTELRTTLSG
GLVNIEGMGVVITGESGSGKTSCALELVRRGHRWVADDVVAVEKRNDGLL
YGRSHGFETSLLEVKGWGIVRAEDVMAPSSIMSESRIDCIMEMVEEVNAD
KNRESGKPSKVLKNIMGVDLPCVSIRASRDASCPVAEMESCIRTLQRLRR
>SYN_00227 hypothetical cytosolic protein
MTEELKEKTVVRIDPDLADLIPGFLENRRKDIALILSALEQGDYETIRIL
GHSMKGCGSGYGFDSITDLGRSLEEAAKSGDEEDIKRKTAELSTYLDSLD
IVYE
>SYN_01701 signal transduction histidine kinase
MMETFILATVSLIIAISLFINKNKDEKKITFAILCMGIFLQRSASFLFFV
AGAEYWKTLGELGLLLLPAVSLNFTRTLIIKGDYIKKKQVIAAFVVPILV
FLAELTGIIQEHTFHLLMAVYIAGVAVAIYLSIVVYTIKKAVSVEKRRLI
YLAIACAIAAGFCLLDFALQKEMELPPLSNIVIAALLYFVLLIVAYPHLT
RLHELMARTLVITIQTILATGCFYLVITLFTADSTIPFTPILVSAFVIVI
SVTPLKVIMKKIFSYFYPGSQDVFTSLYAFDERLEREKSMMLEEMAPVLA
HEIKNPLGSIKGAAQYLATEIDSEENRKILNVIIEETDRLNGVMSQFLNY
AKPYRYEKTEQKVEPMLQKILSLVEARQIIDRVAIKKEIQENLPAIRIDS
EKIMQVILNIVFNAIEAMPEGGTLTLGARRIEKENREGIEIMVRDTGKGI
AREDLKNIFKPFYTTKERGVGLGLAICNRIVRSHGGEIKVKSFVDKGSTF
RIRLVD
>SYN_00230 response regulator receiver domain and a sigma factor phosphatase domain
MKEKILIIDDSPDIRALLARFLRKAGYDIAEAHDGEDGLRQVKAWKPDLI
LLDIVMPGIDGYQVCRSIKGDSCSRDIPVIFLSARSEAADKIKGLAIGGA
DYITKPFDRGEVMARIENQFKIRHLTYELILANAELTEKQKRLDEDLQAA
AGIQRSLLPQKIPQIEGLDIAWKFMPSEQIGGDIFNVLRLDEDHIGFYMI
DISGHGVPAALVTFSVSQALQPHMGYTIRKIPGSVACPDYEIVPPQEVLK
ALDGEYPWDRFEKFLTIIYLIVNLREGSLVYSNAAHPPPLLLHQDGAFKL
LDKGGTIIGLDGILPFEEGEETVREGDKILLYTDGVFEFTNEEGEIFGEK
RFYDVVKSLIQKPISAILDEIVAAIQNYVKGANLQDDVSLLGIEFKKRKI
NT
>SYN_00171 predicted signal transduction protein
MVPVPDNPTDIRILRHRIEKIDMLPTISGVVRRLTKVIGNPKTSLHEISS
FISSDPALTSRILKMVNSAVFGFPGRISSVTHALTLLGLDAVRSLLMGVT
VLELMQTVMVGLREHSVGCAVAARSIAEIKGLKNLEEVSVAGLLHDIGKV
IFLLEFPKDYRTVMEEAEQKEILVMEAEKARFSETHAAAGQWLAEKLFFP
GKLTDMIAFHHKPGLARSAPLETAIVHLADILVRALGFGYAGDAFVPAVS
PVAFELLDLKERDIREVLKSIENVRASGEDLFW
>SYN_01364 signal transduction histidine kinase
MIWSWTYPVPAGVAHLNTLLISYGAIVPPVLGFFVLTFIFLIAVLRAEKN
QTNILFAGICFLGAIMNADVALVNLISDKILALQIDRWTYHLFVFSLPLY
IRFVHSFLGIGHRKWIEGIAYLFSLSLLFFISSDLFIAGFHHYSFGTIAK
AGPVFHVFSAGVGFTVFYCLVVLLKGLKSADDNHQKNRIKYLIGGMGITA
LVLALNILPVSGIDMYPMGNFSFLPAIFLAFGVLKYDLFDMGAMIRQGTS
YFILTGVLTLVYIFFIYLFNALFLASGGGHSLLPPFLMALLIVLFFNPLR
DRVQKTIDNLFYRGKYDYQKLLEEISRDMASLLKFDQIRDLLLERTSSVL
QLSRVDLLMLNAAGNGYFYQHAGNLCEEISEDGFDRNHPIVHFLEICREP
LDKAVVHRQLHSLPERQTEVITLFDRLHAVLIIPLLSRNRLLGVMALGQR
KSGELFVEEDRQLLMTIANQSVTAMEHAWAYEKISMMNLELERKVEERTA
DLRRVLEEKERTQVQLIRSESLAAIGQLVAGAAHELNNPLSSAYSLTQTT
VETIGSWENVKIELRNEVLDDLDFSLREMRRARDIVRSLLDLSRQTQNYM
ESVNLSAVIDNALRVLHNQYKKDPIVIERNYEEDLPNVQGNFANLGQVFI
NMIKNAIEALPDRRGTISLTTRYDRLADKVIVQCRDTGAGISSDQLKEIF
NPFFTTKPVGKGTGLGLYISHEIIKKHEGSIRVESEKGKGTIFNIEIPRN
RE
>SYN_02801 response regulator with GAF and HD domains
MMERALKIENYSTDQKRILIVDDYPQLRTVVKEALEREGNYEVNEAENGL
EALKLLQNADYDMIISDVMMPGMGGIDLLKSIKEVRSNAVTIMITAYPAV
ETTVSAIKKGAIDFIKKPFDIDELLFKVNLYLRKKQTVSNRESEKDIKHF
FLGDEPDELLLYNYIYDAIENSFGDNNFIFENVVELAMQIVGGKDCALLL
YEEDEQQFHPQIISGIDPETYNLKILPHISDIFKEVADAKGAVVVHSDEN
PGVSPSLICAPLMIRNKVFGILSIRKKGRGERFSKKELNYILILTKRSSL
NVENKILYESLYRSLLDTFKSLVASIQVRDSYTEEHSCRVTELAVNVARS
MGCTSEDIESIRIAGMLHDIGKIAIPDRILLKPDKLMDYEYQVIKSHPGI
GERILKPVMLLEKERKIILHHHERYDGKGYPNGLSGENIPFLSRLLAIAD
SYDAMTNNRPYRYAMPIDDAIGELRKNSNQQFDGHIVECFLQNI
>SYN_02899 transcriptional regulator with sigma 54 interaction domain
MIYPPDSSRGSDRTLKSEEIADLVLNSINYGILAVDRKGMISACNAVARK
FLDIDGQLIGNPVASVPQASELLDFIHSNPQHHHERRITFQGRTLCVHSI
SGSDDETVILLRDATVSDKIRAELKSCKKLNKELEGIIASSHDGILITDG
EGNVLKINDALLRITELTREHFLGHKMESLHENGHFHAESIESRARKEQK
TVTGIQKIRTGKEVMVTSTPMFDDQGNILRMVTNARDMSEIINLQEQLAQ
SREVSSRLQTEFNRMLEDDLRANEMITESPTMYRIIEMSRRIAGSEVTVL
IQGESGVGKEVLAKLIHVWSKRRGAFIKVNCGAIPQHLLESELFGYNRGA
FTGANREGKPGIFELAAEGTLFLDEIEDLPLDLQVKFLQVVQDRAFIRLG
GTRVIKLDVRFIAASNRELNKLVAERKFREDLFYRLNVVPITIPPLRQRK
EDVPLLVNHFLNRYNAKYGVEKTMAPALLSNFMNYPWPGNIRELKNMIER
LVITCSGNIIDVEAMGTKLNISSRNLTDQTVAPEAGHKEEPLSTLKEVVE
EAEKNILSGALKKYRNSRQIGRVLGISHTAVLKKLKKYHLAG
>SYN_00173 response regulator receiver domain
MSGVTEGAKMPRILVVEDDEPLRSVLRQILERTGHEVAEAADGRAAMEIQ
RQKGADLVITDIIMPEVDGIETIMVLRREFPSVKIIAISGGSRVGPREFL
NLARVLGAHRTLHKPFALQEMLDAVDELLGEGGASG
>SYN_02588 response regulator with a HTH DNA-binding domain
MTKKRVMIVDDHPILRKGLSMLINQEPDLTVVAEADTAQRALEMIDSHKP
DMLIVDISLPGIDGIELIKMVKLNNRDLPSLVVSMHDESLFAERALRAGA
RGYIMKQEALDKILVAIRRVLAREIFVSDKIATCMLEKLVSSDDKAVSSP
IGLLSNRELTVFRMIGQGYKTSQIAEKLHLSIKTIESYRAHIKEKLKLSD
GTELLKYAIQWVQNTP
>SYN_00882 signal transduction histidine kinase
MMKMKIMTKAQRMADLEYMKKKVPALEKNPGEEDFAGSFSGEEKYRRLLE
NLSDMVFLLRIPEGDYEYISPSVVEVFGYSASDFYRNPFFMKDIIHPDYF
DYCNEKWEELLEGIAGRSYEYKIIDPKGKERWIHQSNKGIFDPEDRLIAL
VGLCRDITGSRHTETTLKESERKYRRVFEVTGDAVFLVEKKTGSILDANA
AATGLYGYTLVEMTKRRLIDLSTEPDRTVLMLRAGDTQIQQQDHKKKDGT
IFPVEAKVSYFTQKHRKMAVVTVRDISERKRSEKAIRESEARYRSFFEEN
VAILLMINPDTGRIVDANPAACHFYGYSREILKLKMIDDINILSREQILR
DMERARNRECQHFYFLNRLASGEVRDVEAYIGPTEMAGQHLLYFLVHDIT
DRKRMEEELVKAQKLESVGILAGGIAHDFNNILAAILGNVSLAKLYLSPD
DPAYDKMTQAEKSCLQARELTGRLITFSKGGEPLRKKVAVAPFLKDAVSF
FLSGSNVRCEFDFPDFLWPLEIDVGQMQQVVRHLIVNAQEAMPDGGTIRI
SAENVSLKADEVPSLKEGPYVRICIKDQGVGIPREYQTRVFDPYFTTKPM
GGTKGAGLGLAICYSTIKKHEGFLSLVSQPGVETTINIYLPASSDDMKSV
KP
>SYN_01702 response regulator with sigma 54 interaction domain
MEKVLIVDDELNMRVVLQAMLKKKGYQVAQAADGLEALECLEKEQIDVVV
TDLKMPKLSGLGLLEHVTSTYPETPVIIITAHGTIETAVDALKKGAFDYI
TKPFDRDELISVIEKAIRTRIKNHGEVILAEEEIDKYGIVGCSEKIREIY
KTIEKVASTKTTILITGETGTGKELIAHAIHRGSPRKDNAYIKINCGAIA
KNLIEAELFGYEKGAFTGAASAKPGKFELADQGTIFLDEIGEIPRDMQVK
LLQVLQDQTFERVGGIKTIQVDVRIIAATNRDLIKEIKEGNFREDLYYRL
NVVPIKMPPLRERKEDIIPLTHYFLDRFNDKLNMDIKGIDPQVLECFKKY
NWPGNIRELENLIERIILLTKGNTISPEDVPEEIKTMEDQDLPENEVHEK
NPFEEYLLREMENFTERLVLMARSEKKREAGDRLEEDSLDSTEKDQGVYR
KFIKSKTAEVEKKMIEKILEECSGNITHAAKRLGFSRKGLQIKMVKYNLR
KK
>SYN_00968 HD domain protein with metal dependent phosphohydrolase
MINQLMRSVDNLPAFPVTVIKVMDLLSRDDYSIAEVARVISFDQSITANI
LKVSNSAYFSFGRPIRTVLEAVARLGKENVIRAVQTAGISKFYKTTARGY
VSVAADLWEHSVAVALMSQILSRRIYGREDSVLYSAALLHDVGKIIIGAY
VYESLEKIQRVVDGRKCSFIEAEEEVIGINHAELGGKITGYWNLPEEICD
AIAFHHRPDILDKNSVDMQWIVYLADQLCMMTGIGNGIDGLAYLGISEVL
KKFNLREKDLETNMMNLMDDLRNARSILDMV
>SYN_02213 signal transduction histidine kinase
MKMKDENKAGEQLLQRLEAMHQRIAELEKWNSQYRRVAEALSKSERALSI
EKQIADIFLTCLDEEVYGEVLNVVLKIQRSQYGYFGYIDEDGALVMPSMT
LNVWQECQIVQKSIVFPRENWGERLWGRALRERKSFYANGPFSVPEGHVP
IQSFLTVPILYRGESIGLLSVANKEGDYTDEDRKIQEGIAGHIAPILHAR
LQRDRQEKERKRAEEKYQQLFELSSDAIFLIDDEMGRIYEANATTTALYG
YTRDELLERKNTDMSAEPSETRAATIGRRTLIPVRWHRKKDGTVFPVEIT
ARHFTWNSRPVHIAAIRDITPRLKVEEEQKRLEERLHRAEKMEALGVMAG
GVAHDLNNILGVLVGYSELLLLKMPADSPYRGHIANILESGKKSAAIIQD
LLALTRREVAASKVINLNRVVRDYLNTPEFEMLQSLYPGVTFRTDLNPDL
LNMNGSPVHLGKMVMNLVSNAVEASCERGEVTSRTENRYLDAPVSGYDDM
KEGEHVVLAVSDQGKGIAAEDIGRIFEPFYTKKVMGRRNGTGLGLAVVWG
VVKDHGGYIDVRSTEGEGTVFTLYFPVVREEEATEQRKASLLQYQGRGES
ILVVDDVKEQRELARNMLTTLGYRTAAVSSGEEAVEYLRTSRADLMVLDM
IMTPGIDGLETYRRVLEISPGQKAVIVSGYSETERVQEVQKLGAGAYVRK
PYLMEKIGMAIRKELDRD
>SYN_02825 hypothetical cytosolic protein
MKIAVRTKESAYKALEREFESTLVNELIPGILHNFANPLNGIMGRSKLLQ
RRMNEHFNKIKECCPDFAREIVDEQDKLSTDVISICKESDRFFYLFQDLA
SKFYVISDNRFERINLKKLIENELRFLEFYLDFKHEIKKTIKLTSDMPWI
YGTQSGYSLCFSALLRSSMYRMKKSETKELSIITDCDERNIMVVIQDTGA
KMIVNTDSATEGDSLLSCNVDMSSLVCVQLLFKEYNVKSVFEGKTGWNRV
TLQIPVNRESST
>SYN_01953 response regulator with a HTH DNA-binding domain
MIKILIADDHTIVREGLKQIVGDVGDMMVADEAGNGQEALQKIREKDYDV
VLLDISMPGRSGLEVLKDIRAERPKLPVLILSMHSEEQYAVRALRAGASG
YLTKASAPDELIGAIRKVSRGRKYVTASLAEKLALELDADIRKPPHEILS
DREYQVMLMLASGKTVTEIAEELCLSVKTISTYRSRILEKMNMKKNAELT
LYAVQNHLVD
>SYN_01094 signal transduction histidine kinase
MLEKILWILFAIQRQETEMKQEEKIIWQDSLPGHERSFLQPIAVAIVCAV
FIGLILFMGIMDFRRSDRTLTGFMQNQGLSTISVVRKVSEENLKNLIQAS
QRENVPIFTPLQEESFAPQHWLTSSLAGIGRDVDEQWQAEQISNEYLRNI
ALRESLWLIAVMDKDGKVVFQSRPEGPSAGESNPGSKEPPLSSGENLISS
LKKKGINFVALRRKDGSGTVVIALEKDSLRYWALRVSVEKAMEKLGEGQE
MVYLVVMNHEGKLLGQVGNLPGTSKRLDQAFYNVLYGRKAVETRKMKFDN
QPILDITAPFKISDRAGGIARIGLKRDSAEKILSENRRNMFVSLIFTVLV
ALLAMWLLYHNQNRHLAGIIEFERRLEKAERLSSLGQLAAGVAHEIRNPL
NAISMASQRLKREFMPAEPEKAEEFQNMAGVIRDEIRRLNGIIEEFLTFS
KSRRLDMRDYSVTEVLRKMTDLIREEAESRGITLKTEWSDEPVIIPMDVD
KLQQALFNLVKNAMESISGGGSITISLSNEDRHRRIIRIADTGCGMTEEE
VKKIFNPEYTTKQKGLGLGLSLAHEIIRGHGGEIRVLSREKVGTTFELIL
PAERKQDKSTNMAT
>SYN_00929 sensory transduction protein kinase
MNEDLLKDSKARRLNSQIEDMAIRLKHLENDYFLAKEEYEDAILNYMEIL
EELRRKNAELELLKTNLEQRVRERTFELEKSNLALSEEIRKQKLMEEELI
RTRKLESIGVLAGGIAHDFNNLLAIVMGTITLAKISAREDEQIFEELSRA
EAACIQARELTSRLITFSEGGGPLKKIHQLDRLLKESVGIALSGSRVRCA
FDLPGNLWPVLVDENQIQQVILQLVRNAREAMPDGGEAGVRAENVRVPEK
GNLGLKAGAYVKWSVEDQGWGISEEHCSRIFDPYFTTKPLGNLKGMGLGL
AICHSIVKKHDGLISCRSEVGKGSVFTVYLPASPEEKILSCEDIHPASKE
AKGRILVMDDEEMVRQVMEQILSYLGYDVAAAADGETAINLHREALDAGR
PFDLVILDLTVRGGMGGKQALLKMREIDPHVQALIATGYSNDPVVQSFRK
YGFSGAITKPFTLTTLRAVIRDVFECGLCGTDRASLPYGAA
>SYN_03037 PAS domain protein
MTNRKKDCVAVPLNEGELKRLVHELQLHQKELEQQVYLLKAVINNVPDPV
FYKDPDGKYMGCNKAFEEYLDVQQEGILGKDVQDIETADMIELHHRMDKE
LIQKGGRVIYEAKNRPKDGNVRNDIVHKALFHKADGSLGGIVATVTDITE
LKHAKEALAESEAI
>SYN_02510 serine phosphatase regulator of sigma subunit
MTGRTFSMTANLTEVLHKYSKEVARQWAECLHQEVSELYARRPLEELIAT
TSQAGEAYLAAIVHHDCSQIDAFIARISKLRLEGGFSLSEVQKAFEIYRT
LLIPILVKELRGDALLSALQSLNNCMSHTIFSFSDYFHNMANARLMEKQK
KLDEDLKAAAGIQQCLLPRKLEKRPKFENVDIDWKFMPCETIGGDIFNII
HLDEDHLGFYMIDVSGHGVPSALVTFSISQALQPQMGYTIRKRPGLSPDY
EIVPPGEVLKALDSEYPWERFEKFLTIIYVIVDIRSGRLIYSNAAHPPPI
LLHADGTFELLEKGGTIIGMDGILPFEEEEKAFSPGDKILLYTDGVFEFT
NDEGELYGEKRFYPLVKSLSGLAVGKVLDEIILTIERFARGEKFPDDVSL
MGIEFKEESKTT
>SYN_01079 ggdef family protein / response regulator receiver domain
MINLLTTQNLVIGKSPQAILAHIRHELRGPINAILGYSEMWLNDDSLRAI
PNLHANMAKLHAAGLQLRSLIRDILDPAKHDGRKEQDVRDLGVILRHAFR
MPVWAILGYNAMLTENKAETVDRATEFLADLHRIEDATQRLFTQADMIAT
TGCLPVDQTIYKPSKELRVQLQTIVARFRSARHPRSQYAAAEKGKILVVD
DDTANCDLLSRQLDRLGYSVTVAQNGIIALDLLSTQTFDLVLLDILMPVV
SGIEVLKCLRCAWSIAELPVIMVTARDRNDDIVSALDCGANDYVAKPFSL
PVVLARVRTQMMLKQTVADLENLNRKLEKLSLHDGLTNIPNRRCFNETFE
REQLRTRRNGMPLSLILLDVDFFKRYNDTYGHEAGDQVLCRVADLLVSAT
DRGGDMVFRYGGEEFVILLPETPAAGARFVAERIHSAIQQLAIPHLTSTV
AHHLTASMGIATATPSDKESYYTLFERADSQLYKVKASGRNSLRQSPD
>SYN_01234 response regulator receiver domain with sensory domain
MKEIIHEFKWICHMDLTSRILIVDDLPQERWMLGALLKSYDYELSYATNG
HEALELAKKINPDLILLDVMMPGMDGFEVCRRIRKTPLIAEVPIMMVTAL
NEAEVRRKGVEIGADDFISKPFDRAELQARVRNITRLNRHRRHRLHEERV
IQEKLFNALPDGLMVLAENGTIQIVNPALRRMLLYRDSTELMGRTLSELL
APDYRETFEGSFHRCLSDPSCMENNQLDFLRRDGSRMTAELTVTSLAGEG
MRALQVILRDITDRIKTESRLRESEEQYRVLFMGSTQGILATDMETKRFT
FANPAVCRMLGYSEEELLRLGLADIHPRNFLDCAVIEFELQVRGEREISS
GIPYLRKDGTVFYADTSGSKTLFKGRECHVSFLTEVTQRKLAEETLELTL
NNLKKAFAGAIQVMVSAVEARDSYTAGHQRRTADLASTIAGEMGLSQEKI
DAIRMAGSIHDIGKLFVPSEILCKPAKLFDIEFTLIKEHPRQGFEILKDV
DFPWPLADIIYQHHERIDGSGYPRNLKGDDILVEARILSVADTVEAMASH
RPYRPGLGLDLALEEIEKNRGIFYDCVAVDACLRLFREKGYNFSLT
>SYN_01539 universal stress protein family
MKGGKIMFERILYPTDFSDVSMKALKYVKQLKDAGAKEVTVLHVIDERTL
VVPDVFSGIDFMAVENELSKVGEEKCKNIVAELQERGLNARYRIEKGIPF
LEILKVSREEDVSLIVIGSHGVSNVEEMLLGSVSEKVIRKALRPVLVVKR
>SYN_01374 sensory transduction protein kinase
MSDIPNKPSFELEAELFMQNSRGWETIFDTLSELTLVTDAGKRVVRCNRA
VIVRLGMSYRKIIGQPINVLFFGSELPEVDPFAEGVREVHIPGISGDFLI
TSNPIGGGLLPQGMVHVMMDITERKRAEEMVRERESIYRILAEHSYAGVY
VVQDGRFRFINSNAASYGGYTRTELLGRSTDILVHPRDKEEENKNAGDML
KGKRTTPYEFRIVTKDGEIRWIMETVTSITYEGKPAILGNSMDITEKRQR
EMHDFQSQKLESVGLLAAGIAHEINTPIQFVGDNIHFMNDAFQDIFPLLA
LHDDFKSLDTANPAECAALRNRILEKADAMDLDYLREEIPHAIEQALDGI
QRMSHIVQAMREFSHPGGAEKTNFDLNKAIESTIILTRNEWKYTTELTTS
LAQDLPPVRGYPADLNQVILNLLINAAHAIQARLQNEPDVKGEIEVSTHR
TGDKVEVCIRDTGTGIPPEIQSKIFDPFFTTKEVGKGTGQGLAIARNIIV
RKHGGRIYFESQVGKGTTFHIRLPLEGY
>SYN_00967 chemotaxis protein
MLMSFNVMIVDDSNAMRGVIRKIIAMSGFKMDACLEAGNGKEAMTLLDSN
WVDVILSDINMPEMNGLELLSRLKQDDLFKEIPVIMITTEGSSPRMEEAF
RYGAKGFIKKPFLPGDLKKVLHEVLGVNDDGDYGSDEEGDSDLDF
>SYN_02356 anti-sigma F factor antagonist
MFRMRHYRISFLFMHHNHLPSMPFAHRWFKRSSASLCIHLMAIIRPRKAC
ENVSEMHIRTLLYLPGRQTAFCHFQTPGNRRVAMEILSRTENNITVVTVT
GRMDALTAPDYQDKLNELIAKGATTFVVDFEGLDYIGSAGLRGILSTAKA
LKGKGGEVHFANVKGAVKEVFETSGFDSIFQIHDSVASALEGIG
>SYN_00726 uspA family domain-containing protein
MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDG
HFLNAAEKSARREVIEKWQNNQQLKLESVFKKVTERLENAGLNKNQITTK
SVVATLDVVADRILEEARTGGYQMLVMGRHGYSSTRKLTMGSVSNAVLSQ
DSALAVCIVK
>SYN_01919 sigma-54-dependent transcriptional activator
METTSRQMDVLLTSSMPLSDKDKLLKTLFRISSLIADPSNVEEIMQKILD
DVVDALGFDQGIIRLLNDSKQYLETKVVKNYNPEEKKRAFTVAIDLTDDC
IGSKVFKSGKAMVIEDVSTDTRLTATDRILTRIHDQGSLFCAPLKIGDEV
FGTAATWCRQKTRFFPEMMDLFLTFANQMSIIIYNAQLFKNNAEKIRHLT
VLGKAVSEMNSSYVLDNRIRDILISSALDIAGAPKIIFYLIDHDQKRYLV
YDGKQMSIEEMQIRNKKIEQSIISRAIESNVIVVKHPSSEEDGFFPIFKD
HHSEIAIPMRIRDKFRGALYLARVRNLYTPDQINILDILVKNACTAYDNA
IMHSLLSLEARTLKTEVEKLKEREDILLGFDNIIGKSSKMAGIFHVIKEV
AGHDTNVLIQGESGTGKELIARAIHRQSNRSGKAFVDVNCAAIPGTLLES
ELFGYEAGAFTDARKKKIGLLDYANGGTMLLDEIGDMSFPLQAKFLRVLE
EGYIRRLGGTENIPVHPVNEYL
>SYN_02215 signal transduction histidine kinase
MKKSERKLSLRNFWVMIPPWVILGALLLLIPLFGTITLGNIHLERELTTR
LLIEKGEALIRSFEAGARTGAGLEWSSFQLRKLLIETARQPGVNHLIIAD
SQGVILADSDPSMVGELYGWDLDLAAAAQKTQVAWRQIANPQGAETFEVY
RGFLPEEGPFPGLGEESASPDNKRPDGNRSRDCVIFVGLDMGPVLAAREQ
AARNAVITALSLLLIGFAGMISLFLAQGYRSVRGSLSQVKAFSDSLVDHM
PIGLVAMDLEEKIMAFNETAEVIFRLSGGDVLGREASGILPDELLEMPDT
LDAAGPILEKEMECQLGDGRTVPLEVIATRLQDDEGTLFGYAILFRDLTE
VQRLKSEVERSRRLAAIGSLAAGVAHEIRNPLSSIKGFATVLRERHRENP
EDQRIADIMISEVERLNRVIGQLLEFSRPLTMNRKDSAIEPILQHTVKMI
EEQARKKGIDIRTEFPEGVPDLLIDPDKMTQVFLNLSLNAVNAMDTGGTL
SLKISRPEARTIRVDVADTGTGIRPDELGRIFDPYFTTRPSGTGLGLPIA
QRIVEAHGGKIAVASQQGKGTVFSVFLPCRETSAGHTDKELSL
>SYN_02214 response regulator with sigma 54 interaction domain
MKKKSEVLVVDDDFAHRTMLKTLISGWGYDVSEADDGQSAIEAVHRRPFD
LILMDIRMVRISGIEALEEIRRLNPAIPIILMTAYASVETAVEALKKGAY
DYLTKPLDFDELRLVLERGLEHTRLKEENLLLKERLGIRFDRRNIIGRSE
SMTRLLDLVAQVAPSEATVLLSGESGTGKEVIAAAIHYNSLRKEKPFIKI
NCAAITETLLESELFGHEKGAFTGADRRKEGKFRQADGGTILLDEVSEMS
LAMQVKLLRVLQEREITRVGGDEVIPIDVRVITATNRDLVREIAAGRFRE
DLYYRLNVVTLQVPPLRERKEDIPLLAAHFLKEFAEKNRKELKGFTPRAL
DRMLRYSWPGNVRELMNTVERGVVLSRSDYLDESDLSPILLEKESPEENP
ECAGGNSSLEVVEKETILKTLEEAGGNKSEAARRLGITRRTLHQKLKKYG
KM
>SYN_00574 cAMP-dependent transcriptional regulator
MSITDLLKQIPLFESLNDSERRRLESLLQRRSLEKGEILFHKGDIGSTFY
IIIKGLIKIGVSNKLGDEVTLALLRDGDFFGEMALLDEQPRSADATALED
SILYVLDRNDFFPFLIENENAVRSILRALSMRLRRTDDLFAELSFLTVSA
RLAKRLLELAKPTQTHGEEPGEFRVQMSQRELAAMLGVTRESINKELKIL
KDKGMVTTSRNAIIIKDLDRLKRRTR
>SYN_00034 response regulator with a winged-helix DNA-binding domain
MGILPSRGNWNLGIEDRNPLNLNKREISMKILIVDDDPGTTDLLEISTSL
WGYYPGKAGRADDALELLNRNSYDILITDAEMPGMSGFDLCRTVRSRFPH
MFIIGITGSLDFRKFEEAGADTFFRKPFKLDDLHAVLRNIQPAFESG
>SYN_02581 signal transduction histidine kinase
MKILVFIFSSSLDCASLKCSHIILSAGIRGEGGLQSMKTLPLSRCGEKEN
LSWPLFCSNRRKETAKRESSAREPLESDQNNLRRILDSLDAGAYVTDMET
CEILYINRHLRYICGDVEGRICWQVFQKNQDGPCPFCNNGRLVNERGEPE
RVLLREVKNTRNQRWYECRDSAVSWFDGRIVRLEIFTDITERKRKEEEYA
RKMKLETLCVLAEDIIHDFNNLLSVSMGYLSLARLNVPPYDPASQFLEKT
EEAFMKSGKLAARLFALIGQEGKPFHRRVSPDVLLLDSVRLFLRGSDLKS
AFVLAAPLWTVCVDENQIRQVIFHLLQNARQAMPQGGQVTIRAENVFLNA
GEKGDLPVGSYVRWSVEDRGIGISSEILPRVFDPGFAAWPDDNREKSGWG
LAVSRSIVRRHQGLIDCRSEPGVGTTMIVYLPAETVP