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2024-05-19 00:59:58

Gene list

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COG category: Signal transduction mechanisms
Organism: Syntrophus aciditrophicus SB

Number of genes found: 136

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Syntrophus aciditrophicus SB
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SYN_02359 serine phosphatase RsbU, regulator of sigma subunitSubName: Full=Serine phosphatase RsbU, regulator of sigma subunit; chromosome CDS499993 1959 - 0.53803
NA SYN_02214 response regulator with sigma 54 interaction domainSubName: Full=Response regulator with sigma 54 interaction domain; chromosome CDS120128 1359 - 0.577631
NA SYN_00962 chemotaxis proteinSubName: Full=Chemotaxis protein; chromosome CDS1217704 381 + 0.454068
NA SYN_00981 response regulator with a winged-helix DNA-binding domainSubName: Full=Response regulator with a winged-helix DNA-binding domain; chromosome CDS1200162 738 + 0.544715
NA SYN_00430 protein-glutamate methylesteraseRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase 1; EC=3.1.1.61; chromosome CDS695580 1077 + 0.546889
NA SYN_01809 sigma-54-dependent transcriptional regulatorSubName: Full=Sigma-54-dependent transcriptional regulator; chromosome CDS2720214 1332 - 0.571321
NA SYN_02718 HD domain family proteinSubName: Full=HD domain family protein; chromosome CDS975615 804 - 0.436567
NA SYN_01217 hypothetical membrane proteinSubName: Full=Hypothetical membrane protein; chromosome CDS2475498 486 + 0.512346
NA SYN_01466 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS1004033 1422 + 0.472574
NA SYN_00590 two-component system response regulatorSubName: Full=Two-component system response regulator; chromosome CDS2399421 1458 - 0.515089
NA SYN_02713 response regulator containing sigma 54 interaction domainSubName: Full=Response regulator containing sigma 54 interaction domain; chromosome CDS981743 1374 + 0.487627
NA SYN_02585 transcrption factor sigma 54 typeSubName: Full=Transcrption factor sigma 54 type; chromosome CDS227556 1668 - 0.536571
NA SYN_00942 serine kinase of the HPr protein, regulates carbohydrate metabolismSubName: Full=Serine kinase of the HPr protein, regulates carbohydrate metabolism; chromosome CDS1233380 903 + 0.508306
NA SYN_00775 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS2371227 648 + 0.5
NA SYN_02801 response regulator with GAF and HD domainsSubName: Full=Response regulator with GAF and HD domains; chromosome CDS1392497 1485 + 0.405387
NA SYN_00943 nitrogen regulatory IIA proteinSubName: Full=Nitrogen regulatory IIA protein; EC=2.7.1.69; chromosome CDS1232779 462 + 0.424242
NA SYN_01374 sensory transduction protein kinaseSubName: Full=Sensory transduction protein kinase; EC=2.7.3.-; chromosome CDS1116334 1587 - 0.523629
NA SYN_00875 response regulator containing a CheY-like receiver domain and an HD-GYP domainSubName: Full=Response regulator containing a CheY-like receiver domain and an HD-GYP domain; chromosome CDS872537 1092 - 0.481685
NA SYN_01019 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1160725 654 - 0.495413
NA SYN_00099 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1821738 1935 + 0.437209
NA SYN_02339 transcriptional regulator GerE familySubName: Full=Transcriptional regulator GerE family; chromosome CDS519120 1929 - 0.448937
NA SYN_01702 response regulator with sigma 54 interaction domainSubName: Full=Response regulator with sigma 54 interaction domain; chromosome CDS2991661 1509 - 0.473161
NA SYN_02380 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS181931 1641 - 0.519196
NA SYN_02543 PAS sensory box/GGDEF family proteinSubName: Full=PAS sensory box/GGDEF family protein; chromosome CDS1501507 903 - 0.492802
NA SYN_02356 anti-sigma F factor antagonistRecName: Full=Anti-sigma factor antagonist; chromosome CDS503332 585 - 0.497436
NA SYN_00248 cyclic nucleotide-binding domain proteinSubName: Full=Cyclic nucleotide-binding domain protein; chromosome CDS477136 690 + 0.562319
NA SYN_01337 dnaK suppressor proteinRecName: Full=RNA polymerase-binding transcription factor DksA; chromosome CDS1279733 453 - 0.470199
NA SYN_00970 chemotaxis protein methyltransferaseRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS1210763 834 + 0.42446
NA SYN_01191 transcriptional regulator with sigma 54 interaction domainSubName: Full=Transcriptional regulator with sigma 54 interaction domain; chromosome CDS2545626 1368 + 0.572368
NA SYN_01291 signal transduction histidine kinase with PAS domainSubName: Full=Signal transduction histidine kinase with PAS domain; chromosome CDS2769528 2484 + 0.528986
NA SYN_01017 deacetylase family protreinSubName: Full=Deacetylase family protrein; chromosome CDS1162500 747 + 0.508701
NA SYN_02899 transcriptional regulator with sigma 54 interaction domainSubName: Full=Transcriptional regulator with sigma 54 interaction domain; chromosome CDS820312 1779 - 0.49747
NA SYN_00574 cAMP-dependent transcriptional regulatorSubName: Full=cAMP-dependent transcriptional regulator; chromosome CDS2387048 681 + 0.51395
NA SYN_00967 chemotaxis proteinSubName: Full=Chemotaxis protein; chromosome CDS1212960 438 + 0.442922
NA SYN_01438 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS256666 1686 - 0.525504
NA SYN_01539 universal stress protein familySubName: Full=Universal stress protein family; chromosome CDS2275683 453 - 0.476821
NA SYN_02361 HD-GYP domain proteinSubName: Full=HD-GYP domain protein; chromosome CDS1266673 1623 + 0.473198
NA SYN_01481 adenylate cyclaseSubName: Full=Adenylate cyclase; EC=4.6.1.1; chromosome CDS1016771 2250 + 0.533333
NA SYN_02005 response regulator protein with GGDEF domainSubName: Full=Response regulator protein with GGDEF domain; chromosome CDS1841593 1068 - 0.53839
NA SYN_00930 predicted signal transduction proteinSubName: Full=Predicted signal transduction protein; chromosome CDS2312640 882 - 0.530612
NA SYN_00969 chemotaxis protein that stimulates methylation of MCP proteinsRecName: Full=Probable chemoreceptor glutamine deamidase CheD 1; EC=3.5.1.44; chromosome CDS1211600 483 + 0.478261
NA SYN_01079 ggdef family protein / response regulator receiver domainSubName: Full=Ggdef family protein / response regulator receiver domain; chromosome CDS2811427 1497 + 0.561122
NA SYN_02484 universal stress protein familySubName: Full=Universal stress protein family; chromosome CDS914170 840 + 0.541667
NA SYN_01633 nif-specific regulatory protein with sigma 54 interaction domainSubName: Full=Nif-specific regulatory protein with sigma 54 interaction domain; chromosome CDS3058831 1542 + 0.562905
NA SYN_00968 HD domain protein with metal dependent phosphohydrolaseSubName: Full=HD domain protein with metal dependent phosphohydrolase; chromosome CDS1212082 846 + 0.456265
NA SYN_02714 signal transduction histidine kinase involved in nitrogen metabolism regulationSubName: Full=Signal transduction histidine kinase involved in nitrogen metabolism regulation; chromosome CDS979407 2223 + 0.462888
NA SYN_01077 sensor proteinLuxQSubName: Full=Sensor proteinLuxQ; EC=2.7.3.-; chromosome CDS2808145 2868 + 0.547768
NA SYN_02810 carbon storage regulatorRecName: Full=Carbon storage regulator homolog; chromosome CDS1378361 240 + 0.425
NA SYN_01701 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS2993276 1521 - 0.461538
NA SYN_00230 response regulator receiver domain and a sigma factor phosphatase domainSubName: Full=Response regulator receiver domain and a sigma factor phosphatase domain; chromosome CDS3090900 1209 + 0.51861
NA SYN_01078 response regulator receiver domainSubName: Full=Response regulator receiver domain; chromosome CDS2811027 408 + 0.571078
NA SYN_01292 response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainSubName: Full=Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; chromosome CDS2772045 402 + 0.507463
NA SYN_00227 hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS3092953 315 - 0.526984
NA SYN_00882 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS861038 1959 + 0.500766
NA SYN_01901 GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolaseSubName: Full=GTP pyrophosphokinase / guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; EC=2.7.6.5; EC=3.1.7.2; chromosome CDS1780697 1506 + 0.503984
NA SYN_00229 anti-sigma B factor antagonistRecName: Full=Anti-sigma factor antagonist; chromosome CDS3092120 345 + 0.481159
NA SYN_03037 PAS domain proteinSubName: Full=PAS domain protein; chromosome CDS522401 495 - 0.444444
NA SYN_00127 response regulator receiver domainSubName: Full=Response regulator receiver domain; chromosome CDS879661 573 + 0.511344
NA SYN_01122 transcriptional regulator, sigma-54-dependentSubName: Full=Transcriptional regulator, sigma-54-dependent; chromosome CDS410684 1938 + 0.561404
NA SYN_00974 response regulator CheY-like receiver domainSubName: Full=Response regulator CheY-like receiver domain; chromosome CDS1206189 459 - 0.45098
NA SYN_00715 sensory domain linked to a LuxR regulatory proteinSubName: Full=Sensory domain linked to a LuxR regulatory protein; chromosome CDS2202058 2151 + 0.444909
NA SYN_01919 sigma-54-dependent transcriptional activatorSubName: Full=Sigma-54-dependent transcriptional activator; chromosome CDS1969256 1569 - 0.474187
NA SYN_00171 predicted signal transduction proteinSubName: Full=Predicted signal transduction protein; chromosome CDS72052 852 + 0.561033
NA SYN_02258 cheY-like receiver domain proteinSubName: Full=CheY-like receiver domain protein; chromosome CDS584753 504 + 0.543651
NA SYN_00705 cAMP-dependent transcriptional regulatorSubName: Full=cAMP-dependent transcriptional regulator; chromosome CDS2193762 750 - 0.490667
NA SYN_00525 predicted phosphohydrolaseSubName: Full=Predicted phosphohydrolase; chromosome CDS363043 1065 + 0.510798
NA SYN_02581 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS221987 1314 + 0.530441
NA SYN_00061 phosphate regulon sensor proteinSubName: Full=Phosphate regulon sensor protein; EC=2.7.3.-; chromosome CDS1533654 1752 + 0.535388
NA SYN_02722 sensory box/GGDEF family proteinSubName: Full=Sensory box/GGDEF family protein; chromosome CDS971072 885 + 0.463277
NA SYN_01358 hypothetical membrane proteinSubName: Full=Hypothetical membrane protein; chromosome CDS1133436 1146 - 0.504363
NA SYN_01373 Hydrogenase transcriptional regulatory proteinSubName: Full=Hydrogenase transcriptional regulatory protein; chromosome CDS1117921 1158 - 0.529361
NA SYN_00434 chemotaxis protein methyltransferaseSubName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS688923 1572 + 0.522901
NA SYN_01222 sensory transduction protein PAS domainSubName: Full=Sensory transduction protein PAS domain; chromosome CDS2481027 630 - 0.493651
NA SYN_00034 response regulator with a winged-helix DNA-binding domainSubName: Full=Response regulator with a winged-helix DNA-binding domain; chromosome CDS59594 444 - 0.522523
NA SYN_00112 sensory domain linked to a LuxR family regulatory proteinSubName: Full=Sensory domain linked to a LuxR family regulatory protein; chromosome CDS1181277 2820 + 0.453191
NA SYN_02956 transcriptional regulator containing sigma 54 interaction domainSubName: Full=Transcriptional regulator containing sigma 54 interaction domain; chromosome CDS766633 2094 + 0.518147
NA SYN_01808 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS2718597 1512 + 0.541667
NA SYN_00776 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS2369464 1749 + 0.477416
NA SYN_00904 GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolaseSubName: Full=GTP pyrophosphokinase / guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; EC=2.7.6.5; EC=3.1.7.2; chromosome CDS1653462 2172 + 0.474678
NA SYN_01538 universal stress protein familySubName: Full=Universal stress protein family; chromosome CDS2275189 435 - 0.443678
NA SYN_02510 serine phosphatase regulator of sigma subunitSubName: Full=Serine phosphatase regulator of sigma subunit; chromosome CDS2453130 1239 + 0.500404
NA SYN_02215 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS121483 1782 - 0.592031
NA SYN_01953 response regulator with a HTH DNA-binding domainSubName: Full=Response regulator with a HTH DNA-binding domain; chromosome CDS806039 633 + 0.554502
NA SYN_00726 uspA family domain-containing proteinSubName: Full=UspA family domain-containing protein; chromosome CDS2211642 483 + 0.455487
NA SYN_02593 transcriptional regulator GerE familySubName: Full=Transcriptional regulator GerE family; chromosome CDS449837 1761 + 0.458262
NA SYN_01985 universal stress family protein NSubName: Full=Universal stress family protein N; chromosome CDS1932302 750 + 0.524
NA SYN_00226 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS3093264 2052 - 0.528265
NA SYN_03611 GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseSubName: Full=GTP pyrophosphokinase / guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; EC=2.7.6.5; EC=3.1.7.2; chromosome CDS1872353 633 - 0.488152
NA SYN_00964 protein-glutamate methylesterase CheBRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase 2; EC=3.1.1.61; chromosome CDS1214354 1032 + 0.486434
NA SYN_02576 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS217440 2178 - 0.53214
NA SYN_00359 DNA polymerase V subunitSubName: Full=DNA polymerase V subunit; chromosome CDS2939795 588 - 0.54932
NA SYN_02544 universal stress protein familySubName: Full=Universal stress protein family; chromosome CDS1500941 435 - 0.445977
NA SYN_01635 sigma-54 dependent transcription regulatorSubName: Full=Sigma-54 dependent transcription regulator; chromosome CDS3057027 1353 + 0.474501
NA SYN_00973 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS1206673 1419 - 0.450317
NA SYN_01428 HD domain proteinSubName: Full=HD domain protein; chromosome CDS245800 1983 - 0.516389
NA SYN_00054 phosphotyrosine protein phosphataseSubName: Full=Phosphotyrosine protein phosphatase; chromosome CDS1528605 441 - 0.492063
NA SYN_01090 transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domainsSubName: Full=Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains; chromosome CDS1917267 1608 - 0.509328
NA SYN_02092 fog:ggdef domain membrane proteinSubName: Full=Fog:ggdef domain membrane protein; chromosome CDS3131510 1389 + 0.50468
NA SYN_00314 universal stress protein familySubName: Full=Universal stress protein family; chromosome CDS2970016 429 + 0.531469
NA SYN_01465 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS1002795 1248 + 0.434295
NA SYN_00965 chemotaxis protein that stimulates methylation of MCP proteinsRecName: Full=Probable chemoreceptor glutamine deamidase CheD 2; EC=3.5.1.44; chromosome CDS1213839 519 + 0.454721
NA SYN_02530 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1519124 1371 + 0.485777
NA SYN_00173 response regulator receiver domainSubName: Full=Response regulator receiver domain; chromosome CDS71250 411 + 0.591241
NA SYN_01324 response regulator protein with GGDEF domainSubName: Full=Response regulator protein with GGDEF domain; chromosome CDS1052221 1071 + 0.511671
NA SYN_03377 hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS539585 261 + 0.628352
NA SYN_03717 hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS2338066 510 + 0.505882
NA SYN_01921 sigma-54-dependent transcriptional activatorSubName: Full=Sigma-54-dependent transcriptional activator; chromosome CDS1967379 567 - 0.460317
NA SYN_02825 hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS1366302 789 + 0.395437
NA SYN_02213 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS117870 2157 - 0.561891
NA SYN_01094 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS1923063 1845 - 0.514363
NA SYN_02588 response regulator with a HTH DNA-binding domainSubName: Full=Response regulator with a HTH DNA-binding domain; chromosome CDS232136 651 - 0.526882
NA SYN_00228 histidine kinaseSubName: Full=Histidine kinase; chromosome CDS3092468 447 + 0.516779
NA SYN_01234 response regulator receiver domain with sensory domainSubName: Full=Response regulator receiver domain with sensory domain; chromosome CDS2491484 1791 + 0.524846
NA SYN_01028 bacterial regulatory protein, LuxR familySubName: Full=Bacterial regulatory protein, LuxR family; chromosome CDS1152754 933 - 0.494105
NA SYN_01476 bacterial regulatory protein, LuxR familySubName: Full=Bacterial regulatory protein, LuxR family; chromosome CDS1012519 909 - 0.455446
NA SYN_02721 HD domain / HAMP domain proteinSubName: Full=HD domain / HAMP domain protein; chromosome CDS972227 1455 + 0.475601
NA SYN_01181 transcriptional regulator with sigma 54 interaction domainSubName: Full=Transcriptional regulator with sigma 54 interaction domain; chromosome CDS2553567 1368 + 0.489035
NA SYN_02531 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS1517372 1731 + 0.480069
NA SYN_02357 anti-sigma regulatory factorSubName: Full=Anti-sigma regulatory factor; chromosome CDS502911 414 - 0.5
NA SYN_01363 adenylate and guanylate cyclase catalytic domain proteinSubName: Full=Adenylate and guanylate cyclase catalytic domain protein; chromosome CDS1130054 1005 + 0.461692
NA SYN_01636 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS3055427 1608 + 0.430348
NA SYN_00740 histone deacetylase family proteinSubName: Full=Histone deacetylase family protein; chromosome CDS2223541 1053 + 0.541311
NA SYN_00101 CrtK proteinSubName: Full=CrtK protein; chromosome CDS1820200 468 + 0.542735
NA SYN_00526 calcineurin-like phosphoesteraseSubName: Full=Calcineurin-like phosphoesterase; chromosome CDS364145 642 - 0.520249
NA SYN_02870 histone deacetylase domain proteinSubName: Full=Histone deacetylase domain protein; chromosome CDS2004410 1311 + 0.540809
NA SYN_02794 phoH proteinSubName: Full=PhoH protein; chromosome CDS1593829 1005 - 0.455721
NA SYN_02570 sensory box ggdef family proteinSubName: Full=Sensory box ggdef family protein; chromosome CDS212062 1065 - 0.543662
NA SYN_01364 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS1127799 2259 + 0.490483
NA SYN_01430 gerE transcriptional regulatorSubName: Full=GerE transcriptional regulator; chromosome CDS248605 1074 + 0.478585
NA SYN_00568 signal transduction histidine kinase with reciever domain proteinSubName: Full=Signal transduction histidine kinase with reciever domain protein; chromosome CDS1142901 1950 + 0.535897
NA SYN_01954 signal transduction histidine kinaseSubName: Full=Signal transduction histidine kinase; chromosome CDS804483 1560 + 0.555769
NA SYN_01093 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domainsSubName: Full=Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; chromosome CDS1921669 1371 - 0.547775
NA SYN_01178 response regulator receiver domainSubName: Full=Response regulator receiver domain; chromosome CDS2556275 378 + 0.55291
NA SYN_00929 sensory transduction protein kinaseSubName: Full=Sensory transduction protein kinase; EC=2.7.3.-; chromosome CDS2311163 1476 - 0.534553
NA SYN_00566 sensory transduction protein with PAS domainSubName: Full=Sensory transduction protein with PAS domain; chromosome CDS1140086 1596 + 0.508772
NA SYN_00174 signal transduction histidine kinase with receiver domainSubName: Full=Signal transduction histidine kinase with receiver domain; chromosome CDS69415 1848 + 0.560065