Gene list
Applied filters:
COG category: Signal transduction mechanisms
Organism: Syntrophus aciditrophicus SB
Number of genes found: 136
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Syntrophus aciditrophicus SB | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SYN_01191 | transcriptional regulator with sigma 54 interaction domain | chromosome | CDS | 2545626 | 1368 | + | 0.572368 |
NA | SYN_01019 | two-component response regulator | chromosome | CDS | 1160725 | 654 | - | 0.495413 |
NA | SYN_02543 | PAS sensory box/GGDEF family protein | chromosome | CDS | 1501507 | 903 | - | 0.492802 |
NA | SYN_00314 | universal stress protein family | chromosome | CDS | 2970016 | 429 | + | 0.531469 |
NA | SYN_02215 | signal transduction histidine kinase | chromosome | CDS | 121483 | 1782 | - | 0.592031 |
NA | SYN_01635 | sigma-54 dependent transcription regulator | chromosome | CDS | 3057027 | 1353 | + | 0.474501 |
NA | SYN_01337 | dnaK suppressor protein | chromosome | CDS | 1279733 | 453 | - | 0.470199 |
NA | SYN_01636 | signal transduction histidine kinase | chromosome | CDS | 3055427 | 1608 | + | 0.430348 |
NA | SYN_01954 | signal transduction histidine kinase | chromosome | CDS | 804483 | 1560 | + | 0.555769 |
NA | SYN_00173 | response regulator receiver domain | chromosome | CDS | 71250 | 411 | + | 0.591241 |
NA | SYN_01430 | gerE transcriptional regulator | chromosome | CDS | 248605 | 1074 | + | 0.478585 |
NA | SYN_01094 | signal transduction histidine kinase | chromosome | CDS | 1923063 | 1845 | - | 0.514363 |
NA | SYN_01090 | transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | chromosome | CDS | 1917267 | 1608 | - | 0.509328 |
NA | SYN_00882 | signal transduction histidine kinase | chromosome | CDS | 861038 | 1959 | + | 0.500766 |
NA | SYN_01953 | response regulator with a HTH DNA-binding domain | chromosome | CDS | 806039 | 633 | + | 0.554502 |
NA | SYN_00430 | protein-glutamate methylesterase | chromosome | CDS | 695580 | 1077 | + | 0.546889 |
NA | SYN_02570 | sensory box ggdef family protein | chromosome | CDS | 212062 | 1065 | - | 0.543662 |
NA | SYN_00230 | response regulator receiver domain and a sigma factor phosphatase domain | chromosome | CDS | 3090900 | 1209 | + | 0.51861 |
NA | SYN_02214 | response regulator with sigma 54 interaction domain | chromosome | CDS | 120128 | 1359 | - | 0.577631 |
NA | SYN_02956 | transcriptional regulator containing sigma 54 interaction domain | chromosome | CDS | 766633 | 2094 | + | 0.518147 |
NA | SYN_00525 | predicted phosphohydrolase | chromosome | CDS | 363043 | 1065 | + | 0.510798 |
NA | SYN_01122 | transcriptional regulator, sigma-54-dependent | chromosome | CDS | 410684 | 1938 | + | 0.561404 |
NA | SYN_00434 | chemotaxis protein methyltransferase | chromosome | CDS | 688923 | 1572 | + | 0.522901 |
NA | SYN_02576 | signal transduction histidine kinase | chromosome | CDS | 217440 | 2178 | - | 0.53214 |
NA | SYN_01093 | response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | chromosome | CDS | 1921669 | 1371 | - | 0.547775 |
NA | SYN_01919 | sigma-54-dependent transcriptional activator | chromosome | CDS | 1969256 | 1569 | - | 0.474187 |
NA | SYN_00974 | response regulator CheY-like receiver domain | chromosome | CDS | 1206189 | 459 | - | 0.45098 |
NA | SYN_00359 | DNA polymerase V subunit | chromosome | CDS | 2939795 | 588 | - | 0.54932 |
NA | SYN_01476 | bacterial regulatory protein, LuxR family | chromosome | CDS | 1012519 | 909 | - | 0.455446 |
NA | SYN_00566 | sensory transduction protein with PAS domain | chromosome | CDS | 1140086 | 1596 | + | 0.508772 |
NA | SYN_03717 | hypothetical cytosolic protein | chromosome | CDS | 2338066 | 510 | + | 0.505882 |
NA | SYN_02870 | histone deacetylase domain protein | chromosome | CDS | 2004410 | 1311 | + | 0.540809 |
NA | SYN_00970 | chemotaxis protein methyltransferase | chromosome | CDS | 1210763 | 834 | + | 0.42446 |
NA | SYN_01539 | universal stress protein family | chromosome | CDS | 2275683 | 453 | - | 0.476821 |
NA | SYN_00526 | calcineurin-like phosphoesterase | chromosome | CDS | 364145 | 642 | - | 0.520249 |
NA | SYN_00969 | chemotaxis protein that stimulates methylation of MCP proteins | chromosome | CDS | 1211600 | 483 | + | 0.478261 |
NA | SYN_01078 | response regulator receiver domain | chromosome | CDS | 2811027 | 408 | + | 0.571078 |
NA | SYN_02544 | universal stress protein family | chromosome | CDS | 1500941 | 435 | - | 0.445977 |
NA | SYN_00248 | cyclic nucleotide-binding domain protein | chromosome | CDS | 477136 | 690 | + | 0.562319 |
NA | SYN_00228 | histidine kinase | chromosome | CDS | 3092468 | 447 | + | 0.516779 |
NA | SYN_02339 | transcriptional regulator GerE family | chromosome | CDS | 519120 | 1929 | - | 0.448937 |
NA | SYN_00171 | predicted signal transduction protein | chromosome | CDS | 72052 | 852 | + | 0.561033 |
NA | SYN_02810 | carbon storage regulator | chromosome | CDS | 1378361 | 240 | + | 0.425 |
NA | SYN_01465 | signal transduction histidine kinase | chromosome | CDS | 1002795 | 1248 | + | 0.434295 |
NA | SYN_00034 | response regulator with a winged-helix DNA-binding domain | chromosome | CDS | 59594 | 444 | - | 0.522523 |
NA | SYN_00174 | signal transduction histidine kinase with receiver domain | chromosome | CDS | 69415 | 1848 | + | 0.560065 |
NA | SYN_01702 | response regulator with sigma 54 interaction domain | chromosome | CDS | 2991661 | 1509 | - | 0.473161 |
NA | SYN_00981 | response regulator with a winged-helix DNA-binding domain | chromosome | CDS | 1200162 | 738 | + | 0.544715 |
NA | SYN_00099 | two-component response regulator | chromosome | CDS | 1821738 | 1935 | + | 0.437209 |
NA | SYN_00705 | cAMP-dependent transcriptional regulator | chromosome | CDS | 2193762 | 750 | - | 0.490667 |
NA | SYN_01809 | sigma-54-dependent transcriptional regulator | chromosome | CDS | 2720214 | 1332 | - | 0.571321 |
NA | SYN_00929 | sensory transduction protein kinase | chromosome | CDS | 2311163 | 1476 | - | 0.534553 |
NA | SYN_02722 | sensory box/GGDEF family protein | chromosome | CDS | 971072 | 885 | + | 0.463277 |
NA | SYN_00061 | phosphate regulon sensor protein | chromosome | CDS | 1533654 | 1752 | + | 0.535388 |
NA | SYN_02531 | signal transduction histidine kinase | chromosome | CDS | 1517372 | 1731 | + | 0.480069 |
NA | SYN_01234 | response regulator receiver domain with sensory domain | chromosome | CDS | 2491484 | 1791 | + | 0.524846 |
NA | SYN_01363 | adenylate and guanylate cyclase catalytic domain protein | chromosome | CDS | 1130054 | 1005 | + | 0.461692 |
NA | SYN_00964 | protein-glutamate methylesterase CheB | chromosome | CDS | 1214354 | 1032 | + | 0.486434 |
NA | SYN_00775 | two-component response regulator | chromosome | CDS | 2371227 | 648 | + | 0.5 |
NA | SYN_00943 | nitrogen regulatory IIA protein | chromosome | CDS | 1232779 | 462 | + | 0.424242 |
NA | SYN_01808 | signal transduction histidine kinase | chromosome | CDS | 2718597 | 1512 | + | 0.541667 |
NA | SYN_00875 | response regulator containing a CheY-like receiver domain and an HD-GYP domain | chromosome | CDS | 872537 | 1092 | - | 0.481685 |
NA | SYN_02510 | serine phosphatase regulator of sigma subunit | chromosome | CDS | 2453130 | 1239 | + | 0.500404 |
NA | SYN_01291 | signal transduction histidine kinase with PAS domain | chromosome | CDS | 2769528 | 2484 | + | 0.528986 |
NA | SYN_03611 | GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | chromosome | CDS | 1872353 | 633 | - | 0.488152 |
NA | SYN_01358 | hypothetical membrane protein | chromosome | CDS | 1133436 | 1146 | - | 0.504363 |
NA | SYN_02092 | fog:ggdef domain membrane protein | chromosome | CDS | 3131510 | 1389 | + | 0.50468 |
NA | SYN_02356 | anti-sigma F factor antagonist | chromosome | CDS | 503332 | 585 | - | 0.497436 |
NA | SYN_02794 | phoH protein | chromosome | CDS | 1593829 | 1005 | - | 0.455721 |
NA | SYN_01538 | universal stress protein family | chromosome | CDS | 2275189 | 435 | - | 0.443678 |
NA | SYN_00715 | sensory domain linked to a LuxR regulatory protein | chromosome | CDS | 2202058 | 2151 | + | 0.444909 |
NA | SYN_01324 | response regulator protein with GGDEF domain | chromosome | CDS | 1052221 | 1071 | + | 0.511671 |
NA | SYN_01428 | HD domain protein | chromosome | CDS | 245800 | 1983 | - | 0.516389 |
NA | SYN_01077 | sensor proteinLuxQ | chromosome | CDS | 2808145 | 2868 | + | 0.547768 |
NA | SYN_01921 | sigma-54-dependent transcriptional activator | chromosome | CDS | 1967379 | 567 | - | 0.460317 |
NA | SYN_00776 | signal transduction histidine kinase | chromosome | CDS | 2369464 | 1749 | + | 0.477416 |
NA | SYN_00229 | anti-sigma B factor antagonist | chromosome | CDS | 3092120 | 345 | + | 0.481159 |
NA | SYN_01364 | signal transduction histidine kinase | chromosome | CDS | 1127799 | 2259 | + | 0.490483 |
NA | SYN_02258 | cheY-like receiver domain protein | chromosome | CDS | 584753 | 504 | + | 0.543651 |
NA | SYN_02713 | response regulator containing sigma 54 interaction domain | chromosome | CDS | 981743 | 1374 | + | 0.487627 |
NA | SYN_02530 | two-component response regulator | chromosome | CDS | 1519124 | 1371 | + | 0.485777 |
NA | SYN_01292 | response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | chromosome | CDS | 2772045 | 402 | + | 0.507463 |
NA | SYN_02721 | HD domain / HAMP domain protein | chromosome | CDS | 972227 | 1455 | + | 0.475601 |
NA | SYN_00590 | two-component system response regulator | chromosome | CDS | 2399421 | 1458 | - | 0.515089 |
NA | SYN_00973 | sigma-54 dependent transcriptional regulator | chromosome | CDS | 1206673 | 1419 | - | 0.450317 |
NA | SYN_00930 | predicted signal transduction protein | chromosome | CDS | 2312640 | 882 | - | 0.530612 |
NA | SYN_01373 | Hydrogenase transcriptional regulatory protein | chromosome | CDS | 1117921 | 1158 | - | 0.529361 |
NA | SYN_00227 | hypothetical cytosolic protein | chromosome | CDS | 3092953 | 315 | - | 0.526984 |
NA | SYN_01017 | deacetylase family protrein | chromosome | CDS | 1162500 | 747 | + | 0.508701 |
NA | SYN_01079 | ggdef family protein / response regulator receiver domain | chromosome | CDS | 2811427 | 1497 | + | 0.561122 |
NA | SYN_02714 | signal transduction histidine kinase involved in nitrogen metabolism regulation | chromosome | CDS | 979407 | 2223 | + | 0.462888 |
NA | SYN_02380 | signal transduction histidine kinase | chromosome | CDS | 181931 | 1641 | - | 0.519196 |
NA | SYN_00112 | sensory domain linked to a LuxR family regulatory protein | chromosome | CDS | 1181277 | 2820 | + | 0.453191 |
NA | SYN_01222 | sensory transduction protein PAS domain | chromosome | CDS | 2481027 | 630 | - | 0.493651 |
NA | SYN_01178 | response regulator receiver domain | chromosome | CDS | 2556275 | 378 | + | 0.55291 |
NA | SYN_02484 | universal stress protein family | chromosome | CDS | 914170 | 840 | + | 0.541667 |
NA | SYN_01028 | bacterial regulatory protein, LuxR family | chromosome | CDS | 1152754 | 933 | - | 0.494105 |
NA | SYN_00904 | GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase | chromosome | CDS | 1653462 | 2172 | + | 0.474678 |
NA | SYN_00740 | histone deacetylase family protein | chromosome | CDS | 2223541 | 1053 | + | 0.541311 |
NA | SYN_00127 | response regulator receiver domain | chromosome | CDS | 879661 | 573 | + | 0.511344 |
NA | SYN_00101 | CrtK protein | chromosome | CDS | 1820200 | 468 | + | 0.542735 |
NA | SYN_01181 | transcriptional regulator with sigma 54 interaction domain | chromosome | CDS | 2553567 | 1368 | + | 0.489035 |
NA | SYN_02581 | signal transduction histidine kinase | chromosome | CDS | 221987 | 1314 | + | 0.530441 |
NA | SYN_01466 | sigma-54 dependent transcriptional regulator | chromosome | CDS | 1004033 | 1422 | + | 0.472574 |
NA | SYN_02585 | transcrption factor sigma 54 type | chromosome | CDS | 227556 | 1668 | - | 0.536571 |
NA | SYN_01985 | universal stress family protein N | chromosome | CDS | 1932302 | 750 | + | 0.524 |
NA | SYN_01701 | signal transduction histidine kinase | chromosome | CDS | 2993276 | 1521 | - | 0.461538 |
NA | SYN_00574 | cAMP-dependent transcriptional regulator | chromosome | CDS | 2387048 | 681 | + | 0.51395 |
NA | SYN_01217 | hypothetical membrane protein | chromosome | CDS | 2475498 | 486 | + | 0.512346 |
NA | SYN_02899 | transcriptional regulator with sigma 54 interaction domain | chromosome | CDS | 820312 | 1779 | - | 0.49747 |
NA | SYN_00568 | signal transduction histidine kinase with reciever domain protein | chromosome | CDS | 1142901 | 1950 | + | 0.535897 |
NA | SYN_01481 | adenylate cyclase | chromosome | CDS | 1016771 | 2250 | + | 0.533333 |
NA | SYN_02588 | response regulator with a HTH DNA-binding domain | chromosome | CDS | 232136 | 651 | - | 0.526882 |
NA | SYN_00965 | chemotaxis protein that stimulates methylation of MCP proteins | chromosome | CDS | 1213839 | 519 | + | 0.454721 |
NA | SYN_02361 | HD-GYP domain protein | chromosome | CDS | 1266673 | 1623 | + | 0.473198 |
NA | SYN_00962 | chemotaxis protein | chromosome | CDS | 1217704 | 381 | + | 0.454068 |
NA | SYN_03377 | hypothetical cytosolic protein | chromosome | CDS | 539585 | 261 | + | 0.628352 |
NA | SYN_02801 | response regulator with GAF and HD domains | chromosome | CDS | 1392497 | 1485 | + | 0.405387 |
NA | SYN_02357 | anti-sigma regulatory factor | chromosome | CDS | 502911 | 414 | - | 0.5 |
NA | SYN_00226 | signal transduction histidine kinase | chromosome | CDS | 3093264 | 2052 | - | 0.528265 |
NA | SYN_02359 | serine phosphatase RsbU, regulator of sigma subunit | chromosome | CDS | 499993 | 1959 | - | 0.53803 |
NA | SYN_00967 | chemotaxis protein | chromosome | CDS | 1212960 | 438 | + | 0.442922 |
NA | SYN_01374 | sensory transduction protein kinase | chromosome | CDS | 1116334 | 1587 | - | 0.523629 |
NA | SYN_02718 | HD domain family protein | chromosome | CDS | 975615 | 804 | - | 0.436567 |
NA | SYN_02825 | hypothetical cytosolic protein | chromosome | CDS | 1366302 | 789 | + | 0.395437 |
NA | SYN_02005 | response regulator protein with GGDEF domain | chromosome | CDS | 1841593 | 1068 | - | 0.53839 |
NA | SYN_00726 | uspA family domain-containing protein | chromosome | CDS | 2211642 | 483 | + | 0.455487 |
NA | SYN_02593 | transcriptional regulator GerE family | chromosome | CDS | 449837 | 1761 | + | 0.458262 |
NA | SYN_03037 | PAS domain protein | chromosome | CDS | 522401 | 495 | - | 0.444444 |
NA | SYN_00054 | phosphotyrosine protein phosphatase | chromosome | CDS | 1528605 | 441 | - | 0.492063 |
NA | SYN_00968 | HD domain protein with metal dependent phosphohydrolase | chromosome | CDS | 1212082 | 846 | + | 0.456265 |
NA | SYN_02213 | signal transduction histidine kinase | chromosome | CDS | 117870 | 2157 | - | 0.561891 |
NA | SYN_00942 | serine kinase of the HPr protein, regulates carbohydrate metabolism | chromosome | CDS | 1233380 | 903 | + | 0.508306 |
NA | SYN_01438 | signal transduction histidine kinase | chromosome | CDS | 256666 | 1686 | - | 0.525504 |
NA | SYN_01901 | GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase | chromosome | CDS | 1780697 | 1506 | + | 0.503984 |
NA | SYN_01633 | nif-specific regulatory protein with sigma 54 interaction domain | chromosome | CDS | 3058831 | 1542 | + | 0.562905 |