Gene list
Applied filters:
COG category: Signal transduction mechanisms
Organism: Synechococcus sp. JA-2-3Ba(2-13), JA-2-3Ba(2-13)
Number of genes found: 124
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| Synechococcus sp. JA-2-3Ba(2-13), JA-2-3Ba(2-13) | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | CYB_2001 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 2106782 | 675 | - | 0.536296 |
| NA | CYB_2320 | PhoH family protein | SubName: Full=PhoH family protein; | chromosome | CDS | 2430558 | 984 | - | 0.594512 |
| NA | CYB_2155 | FHA domain protein | SubName: Full=FHA domain protein; | chromosome | CDS | 2256065 | 411 | + | 0.554745 |
| NA | CYB_2264 | universal stress family protein | SubName: Full=Universal stress family protein; | chromosome | CDS | 2369616 | 405 | - | 0.565432 |
| NA | CYB_2190 | anti-anti-sigma factor family protein | RecName: Full=Anti-sigma factor antagonist; | chromosome | CDS | 2294576 | 414 | - | 0.570048 |
| NA | CYB_0283 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 297869 | 411 | + | 0.581509 |
| NA | CYB_1935 | putative methyl-accepting chemotaxis protein | SubName: Full=Putative methyl-accepting chemotaxis protein; | chromosome | CDS | 2026183 | 2493 | - | 0.598877 |
| NA | CYB_2515 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.1.-; | chromosome | CDS | 2609449 | 1644 | - | 0.611922 |
| NA | CYB_1485 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1561335 | 552 | + | 0.527174 |
| NA | CYB_2163 | sensory box protein | SubName: Full=Sensory box protein; | chromosome | CDS | 2264955 | 2016 | - | 0.584325 |
| NA | CYB_1354 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 1422603 | 744 | + | 0.556452 |
| NA | CYB_1056 | HD domain protein | SubName: Full=HD domain protein; | chromosome | CDS | 1095279 | 618 | + | 0.584142 |
| NA | CYB_1934 | sensor histidine kinase/response regulator | SubName: Full=Sensor histidine kinase/response regulator; | chromosome | CDS | 2020574 | 5418 | - | 0.618125 |
| NA | CYB_1388 | FHA domain protein | SubName: Full=FHA domain protein; | chromosome | CDS | 1458975 | 2022 | + | 0.576162 |
| NA | CYB_2171 | FHA domain protein | SubName: Full=FHA domain protein; | chromosome | CDS | 2274847 | 528 | + | 0.579545 |
| NA | CYB_0987 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 1021950 | 1764 | - | 0.594671 |
| NA | CYB_1603 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1675242 | 504 | + | 0.545635 |
| NA | CYB_2666 | anti-anti-sigma factor | RecName: Full=Anti-sigma factor antagonist; | chromosome | CDS | 2753410 | 375 | + | 0.538667 |
| NA | CYB_2066 | GAF/SpoIIE domain protein | SubName: Full=GAF/SpoIIE domain protein; | chromosome | CDS | 2163803 | 1446 | + | 0.591286 |
| NA | CYB_0522 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.11.1; | chromosome | CDS | 536868 | 1899 | - | 0.622433 |
| NA | CYB_2553 | DNA-binding response regulator, LuxR family | SubName: Full=DNA-binding response regulator, LuxR family; | chromosome | CDS | 2659064 | 639 | + | 0.552426 |
| NA | CYB_1548 | gas vesicle protein, GvpL/GvpF family | SubName: Full=Gas vesicle protein, GvpL/GvpF family; | chromosome | CDS | 1623299 | 747 | - | 0.606426 |
| NA | CYB_1653 | sensory box histidine kinase | SubName: Full=Sensory box histidine kinase; | chromosome | CDS | 1730309 | 3069 | + | 0.545455 |
| NA | CYB_1457 | cyclic nucleotide-binding protein | SubName: Full=Cyclic nucleotide-binding protein; | chromosome | CDS | 1533681 | 708 | - | 0.632768 |
| NA | CYB_0249 | DNA-binding response regulator RpaA | SubName: Full=DNA-binding response regulator RpaA; | chromosome | CDS | 264506 | 753 | + | 0.605578 |
| NA | CYB_1008 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 1047612 | 1356 | - | 0.588496 |
| NA | CYB_1344 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 1412287 | 759 | - | 0.602108 |
| NA | CYB_0637 | protein kinase | SubName: Full=Protein kinase; | chromosome | CDS | 648160 | 1605 | + | 0.611215 |
| NA | CYB_0932 | polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein | SubName: Full=Polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein; | chromosome | CDS | 970810 | 1038 | - | 0.600193 |
| NA | CYB_2791 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; EC=2.7.3.-; | chromosome | CDS | 2887174 | 915 | + | 0.587978 |
| NA | CYB_1515 | tetratricopeptide repeat/protein kinase domain protein | SubName: Full=Tetratricopeptide repeat/protein kinase domain protein; | chromosome | CDS | 1588914 | 3813 | - | 0.623918 |
| NA | CYB_0947 | putatve protein phosphatase | SubName: Full=Putatve protein phosphatase; | chromosome | CDS | 983149 | 720 | + | 0.579167 |
| NA | CYB_1939 | response regulator | RecName: Full=Protein PatA; | chromosome | CDS | 2030529 | 1143 | - | 0.572178 |
| NA | CYB_2421 | sensory box histidine kinase | SubName: Full=Sensory box histidine kinase; | chromosome | CDS | 2517517 | 2103 | + | 0.598669 |
| NA | CYB_1640 | sensory box histidine kinase/response regulator | SubName: Full=Sensory box histidine kinase/response regulator; | chromosome | CDS | 1708080 | 4329 | - | 0.599908 |
| NA | CYB_1250 | sensory box protein | SubName: Full=Sensory box protein; | chromosome | CDS | 1297936 | 2445 | - | 0.513292 |
| NA | CYB_2124 | cystine ABC transporter, periplasmic cystine-binding protein | SubName: Full=Cystine ABC transporter, periplasmic cystine-binding protein; | chromosome | CDS | 2217040 | 864 | + | 0.576389 |
| NA | CYB_0723 | FHA domain protein | SubName: Full=FHA domain protein; | chromosome | CDS | 742106 | 588 | + | 0.585034 |
| NA | CYB_0726 | GAF domain protein | SubName: Full=GAF domain protein; | chromosome | CDS | 745337 | 1218 | + | 0.573892 |
| NA | CYB_2029 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2131747 | 279 | - | 0.523297 |
| NA | CYB_2277 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 2384145 | 1095 | - | 0.595434 |
| NA | CYB_1082 | universal stress protein family | SubName: Full=Universal stress protein family; | chromosome | CDS | 1118493 | 897 | + | 0.595318 |
| NA | CYB_2850 | amino acid transporter, periplasmic amino acid-binding protein | SubName: Full=Amino acid transporter, periplasmic amino acid-binding protein; | chromosome | CDS | 2945585 | 930 | + | 0.623656 |
| NA | CYB_0727 | putative methyl-accepting chemotaxis protein | SubName: Full=Putative methyl-accepting chemotaxis protein; | chromosome | CDS | 746837 | 1122 | + | 0.587344 |
| NA | CYB_1864 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.1.-; | chromosome | CDS | 1945812 | 1971 | + | 0.605277 |
| NA | CYB_0177 | anti-anti-sigma factor family protein | RecName: Full=Anti-sigma factor antagonist; | chromosome | CDS | 189779 | 348 | + | 0.520115 |
| NA | CYB_2471 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 2568126 | 1749 | - | 0.594054 |
| NA | CYB_2060 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 2157387 | 657 | - | 0.554033 |
| NA | CYB_0906 | low molecular weight phosphotyrosine protein phosphatase family protein | SubName: Full=Low molecular weight phosphotyrosine protein phosphatase family protein; | chromosome | CDS | 935939 | 501 | + | 0.562874 |
| NA | CYB_0466 | protein kinase | SubName: Full=Protein kinase; EC=2.7.11.1; | chromosome | CDS | 471169 | 2241 | + | 0.59884 |
| NA | CYB_1174 | FHA domain protein | SubName: Full=FHA domain protein; | chromosome | CDS | 1212203 | 528 | + | 0.524621 |
| NA | CYB_0485 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 498467 | 702 | - | 0.571225 |
| NA | CYB_0442 | pspA/IM30 family protein | SubName: Full=PspA/IM30 family protein; | chromosome | CDS | 450944 | 768 | + | 0.566406 |
| NA | CYB_2856 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 2952637 | 744 | + | 0.577957 |
| NA | CYB_0894 | FHA domain protein | SubName: Full=FHA domain protein; | chromosome | CDS | 925552 | 366 | + | 0.565574 |
| NA | CYB_1938 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 2029963 | 378 | - | 0.531746 |
| NA | CYB_1011 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1050509 | 276 | + | 0.583333 |
| NA | CYB_0883 | transcriptional regulator, Crp/Fnr family | SubName: Full=Transcriptional regulator, Crp/Fnr family; | chromosome | CDS | 910559 | 666 | - | 0.569069 |
| NA | CYB_1936 | CheW domain protein | SubName: Full=CheW domain protein; | chromosome | CDS | 2028967 | 519 | - | 0.566474 |
| NA | CYB_1249 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; EC=2.7.-.-; | chromosome | CDS | 1296879 | 849 | - | 0.545347 |
| NA | CYB_0858 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 891888 | 1260 | + | 0.580159 |
| NA | CYB_0949 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.1.-; | chromosome | CDS | 984929 | 1890 | + | 0.622751 |
| NA | CYB_2652 | transcriptional regulator, Crp/Fnr family | SubName: Full=Transcriptional regulator, Crp/Fnr family; | chromosome | CDS | 2740771 | 654 | - | 0.574924 |
| NA | CYB_1937 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 2029601 | 366 | - | 0.560109 |
| NA | CYB_0155 | sodium/hydrogen exchanger/universal stress family protein | SubName: Full=Sodium/hydrogen exchanger/universal stress family protein; | chromosome | CDS | 169411 | 1620 | - | 0.616667 |
| NA | CYB_2689 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 2776914 | 810 | - | 0.591358 |
| NA | CYB_2748 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 2843127 | 1245 | + | 0.583133 |
| NA | CYB_2575 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.1.-; | chromosome | CDS | 2678480 | 1353 | + | 0.597931 |
| NA | CYB_2501 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 2595567 | 702 | + | 0.623932 |
| NA | CYB_1661 | universal stress protein family | SubName: Full=Universal stress protein family; | chromosome | CDS | 1741886 | 648 | - | 0.606481 |
| NA | CYB_1773 | sensory box histidine kinase | SubName: Full=Sensory box histidine kinase; | chromosome | CDS | 1856514 | 3744 | - | 0.547276 |
| NA | CYB_1453 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 1526591 | 2955 | + | 0.62335 |
| NA | CYB_0128 | pspA/IM30 family protein | SubName: Full=PspA/IM30 family protein; | chromosome | CDS | 141133 | 759 | + | 0.591568 |
| NA | CYB_2200 | adenylate cyclase, putative | SubName: Full=Adenylate cyclase, putative; | chromosome | CDS | 2307179 | 1017 | - | 0.586037 |
| NA | CYB_2713 | BolA/YrbA family protein | SubName: Full=BolA/YrbA family protein; | chromosome | CDS | 2806084 | 276 | - | 0.594203 |
| NA | CYB_2751 | putative methyl-accepting chemotaxis protein | SubName: Full=Putative methyl-accepting chemotaxis protein; | chromosome | CDS | 2845498 | 2238 | + | 0.598749 |
| NA | CYB_1654 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 1733374 | 1011 | + | 0.576657 |
| NA | CYB_2750 | CheW domain protein | SubName: Full=CheW domain protein; | chromosome | CDS | 2844901 | 549 | + | 0.562842 |
| NA | CYB_1543 | RelA/SpoT family protein | SubName: Full=RelA/SpoT family protein; | chromosome | CDS | 1617330 | 2283 | - | 0.560228 |
| NA | CYB_0507 | sensory box histidine kinase/response regulator | SubName: Full=Sensory box histidine kinase/response regulator; | chromosome | CDS | 518503 | 4581 | - | 0.578913 |
| NA | CYB_1740 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 1822506 | 1242 | - | 0.5781 |
| NA | CYB_0347 | GGDEF/FHA domain protein | SubName: Full=GGDEF/FHA domain protein; | chromosome | CDS | 365638 | 951 | + | 0.594111 |
| NA | CYB_0712 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 727768 | 1062 | - | 0.612053 |
| NA | CYB_1410 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; EC=2.7.3.-; | chromosome | CDS | 1478037 | 1350 | + | 0.601481 |
| NA | CYB_2926 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 3024715 | 1122 | - | 0.573084 |
| NA | CYB_1345 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 1413155 | 1479 | - | 0.626099 |
| NA | CYB_2752 | sensor histidine kinase/response regulator | SubName: Full=Sensor histidine kinase/response regulator; | chromosome | CDS | 2847737 | 2772 | + | 0.619769 |
| NA | CYB_1242 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 1291088 | 597 | - | 0.624791 |
| NA | CYB_2795 | sensory box histidine kinase | SubName: Full=Sensory box histidine kinase; | chromosome | CDS | 2893312 | 2661 | + | 0.567832 |
| NA | CYB_2031 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 2133374 | 720 | - | 0.561111 |
| NA | CYB_1702 | trunctated cyclic nucleotide-binding protein | SubName: Full=Trunctated cyclic nucleotide-binding protein; | chromosome | CDS | 1787993 | 516 | + | 0.583333 |
| NA | CYB_1639 | sensor histidine kinase/response regulator | SubName: Full=Sensor histidine kinase/response regulator; EC=2.7.3.-; | chromosome | CDS | 1706804 | 1242 | - | 0.602254 |
| NA | CYB_0965 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 1001414 | 783 | - | 0.609195 |
| NA | CYB_2220 | transcriptional regulator, Crp/Fnr family | SubName: Full=Transcriptional regulator, Crp/Fnr family; | chromosome | CDS | 2325600 | 639 | - | 0.616588 |
| NA | CYB_1343 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 1411475 | 744 | - | 0.619624 |
| NA | CYB_2723 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 2815070 | 690 | - | 0.602899 |
| NA | CYB_0174 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 186762 | 693 | - | 0.582973 |
| NA | CYB_2749 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 2844419 | 375 | + | 0.530667 |
| NA | CYB_1679 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein | SubName: Full=ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; | chromosome | CDS | 1755423 | 654 | - | 0.61315 |
| NA | CYB_1130 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 1167880 | 1020 | - | 0.563725 |
| NA | CYB_2363 | BolA protein | SubName: Full=BolA protein; | chromosome | CDS | 2470406 | 291 | - | 0.587629 |
| NA | CYB_1446 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 1516617 | 2187 | + | 0.619113 |
| NA | CYB_2561 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 2664997 | 741 | + | 0.607287 |
| NA | CYB_0028 | sensory box histidine kinase | SubName: Full=Sensory box histidine kinase; | chromosome | CDS | 34638 | 3009 | - | 0.601529 |
| NA | CYB_2722 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 2813527 | 1395 | - | 0.620072 |
| NA | CYB_2377 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 2482282 | 609 | + | 0.604269 |
| NA | CYB_0692 | universal stress protein family | SubName: Full=Universal stress protein family; | chromosome | CDS | 709543 | 843 | + | 0.601424 |
| NA | CYB_2327 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 2435565 | 513 | - | 0.588694 |
| NA | CYB_0917 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 953731 | 1026 | + | 0.604289 |
| NA | CYB_1194 | WD-repeat/protein kinase domain protein | SubName: Full=WD-repeat/protein kinase domain protein; | chromosome | CDS | 1233137 | 2280 | - | 0.630263 |
| NA | CYB_2465 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 2562273 | 2505 | + | 0.616367 |
| NA | CYB_2415 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2511197 | 381 | - | 0.56168 |
| NA | CYB_1522 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.11.1; | chromosome | CDS | 1601051 | 1662 | + | 0.605295 |
| NA | CYB_0352 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 369353 | 366 | + | 0.554645 |
| NA | CYB_1044 | DNA-binding response regulator, LuxR family | SubName: Full=DNA-binding response regulator, LuxR family; | chromosome | CDS | 1084594 | 690 | + | 0.584058 |
| arsC | CYB_2366 | arsenate reductase | SubName: Full=Arsenate reductase; EC=1.20.4.1; | chromosome | CDS | 2472580 | 417 | + | 0.369305 |
| cpcB-2 | CYB_2740 | phycocyanin, beta subunit | SubName: Full=Phycocyanin, beta subunit; | chromosome | CDS | 2834686 | 519 | - | 0.574181 |
| glnH | CYB_2169 | polar amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein | SubName: Full=Polar amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein; | chromosome | CDS | 2272659 | 858 | - | 0.610723 |
| kaiC | CYB_0488 | circadian clock protein kinase KaiC | RecName: Full=Circadian clock protein kinase KaiC; EC=2.7.11.1; | chromosome | CDS | 501274 | 1626 | - | 0.588561 |
| ntcA | CYB_2533 | nitrogen-responsive regulatory protein | SubName: Full=Nitrogen-responsive regulatory protein; | chromosome | CDS | 2637684 | 675 | - | 0.554074 |
| pmgA | CYB_0805 | pmgA protein | SubName: Full=PmgA protein; | chromosome | CDS | 831035 | 444 | + | 0.556306 |
| sasA | CYB_1895 | adaptive-response sensory histidine kinase SasA | RecName: Full=Adaptive-response sensory-kinase SasA; EC=2.7.-.-; AltName: Full=Synechococcus adaptive sensor protein A; | chromosome | CDS | 1981377 | 1134 | - | 0.611111 |
| sixA | CYB_0097 | phosphohistidine phosphatase SixA | SubName: Full=Phosphohistidine phosphatase SixA; EC=3.1.3.-; | chromosome | CDS | 114811 | 588 | + | 0.608844 |
| typA | CYB_2260 | GTP-binding protein TypA | SubName: Full=GTP-binding protein TypA; | chromosome | CDS | 2361940 | 1818 | + | 0.59791 |
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