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2024-04-29 03:04:30

Gene list

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COG category: Signal transduction mechanisms
Organism: Salinibacter ruber DSM 13855, DSM 13855; M31

Number of genes found: 156

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Salinibacter ruber DSM 13855, DSM 13855; M31
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SRU_0258 alginate biosynthesis regulatory proteinchromosome CDS344731 759 - 0.636364
NA SRU_1637 PAS domain S-box proteinchromosome CDS2035196 2715 - 0.654144
NA SRU_2835 polyhydroxyalkanoate granule-associated protein PhaF, putativechromosome CDS3504347 660 + 0.675758
NA SRU_0202 hypothetical proteinchromosome CDS276522 405 + 0.602469
NA SRU_0141 Methyl-accepting chemotaxis protein (MCP) signaling domainchromosome CDS189441 1473 - 0.642227
NA SRU_0502 Low molecular weight protein-tyrosine-phosphatasechromosome CDS675722 405 + 0.725926
NA SRU_2062 sensory box sensor histidine kianse/response regulatorchromosome CDS2552102 2718 - 0.680648
NA SRU_1985 universal stress proteinchromosome CDS2453804 1035 + 0.68599
NA SRU_2823 probable methyl-accepting chemotaxis proteinchromosome CDS3486421 1845 + 0.679133
NA SRU_2856 probable transmembrane sensor histidine kinase transcription regulator proteinchromosome CDS3535488 1272 - 0.695755
NA SRU_2513 probable sensor/response regulator hybrid protein, putativechromosome CDS3124666 1875 + 0.688533
NA SRU_2601 chemotaxis response regulator protein-glutamate methylesterasechromosome CDS3229382 1215 - 0.68642
NA SRU_0861 putative membrane proteinchromosome CDS1103901 1830 + 0.70765
NA SRU_2510 Sensory rhodopsin transducer (methyl-accepting chemotaxis protein)chromosome CDS3119146 1557 - 0.65639
NA SRU_2418 response regulatorchromosome CDS3018836 1920 + 0.657812
NA SRU_2458 Low molecular weight phosphotyrosine protein phosphatasechromosome CDS3066242 414 - 0.635266
NA SRU_0679 universal stress protein familychromosome CDS885029 492 + 0.715447
NA SRU_0838 PTS system, IIA componentchromosome CDS1068969 486 + 0.693416
NA SRU_0575 phosphate regulon sensor protein phoRchromosome CDS757100 1305 + 0.65977
NA SRU_0551 LexA repressor, putativechromosome CDS726717 1017 - 0.632252
NA SRU_2830 response regulator receiver domain proteinchromosome CDS3496425 744 + 0.694892
NA SRU_2393 sensor histidine kinase, possible pleCchromosome CDS2980688 1743 + 0.661503
NA SRU_0251 sensory box/ggdef family protein, putativechromosome CDS333682 3357 + 0.586833
NA SRU_0297 peptidase, S41 familychromosome CDS391125 3486 - 0.68187
NA SRU_1357 transcriptional regulator, putativechromosome CDS1705741 942 - 0.649682
NA SRU_2597 methyl-accepting chemotaxis transducerchromosome CDS3222953 1800 - 0.673333
NA SRU_0144 putative redox sensing proteinchromosome CDS195674 5007 + 0.673058
NA SRU_2327 LytTr DNA-binding domain familychromosome CDS2900944 837 + 0.688172
NA SRU_2166 transcription regulator, Crp family, putativechromosome CDS2679061 693 - 0.69697
NA SRU_0252 TcrAchromosome CDS337039 471 + 0.624204
NA SRU_0836 response regulator receiver domain proteinchromosome CDS1064027 2091 + 0.656145
NA SRU_2855 two-component system response regulator proteinchromosome CDS3534595 969 - 0.670795
NA SRU_0873 sensory transduction histidine kinasechromosome CDS1115735 2007 + 0.684604
NA SRU_0415 putative transmembrane sensor histidine kinase transcription regulator proteinchromosome CDS560405 1134 + 0.649912
NA SRU_0190 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain proteinchromosome CDS260644 3612 - 0.657254
NA SRU_1206 MCP domain signal transducer, putativechromosome CDS1518042 258 + 0.608527
NA SRU_2622 sensor protein, putativechromosome CDS3248700 960 + 0.702083
NA SRU_2574 sensor histidine kinase with a PAS domainchromosome CDS3196564 2163 - 0.657883
NA SRU_0354 sensor histidine kinasechromosome CDS478750 504 + 0.642857
NA SRU_0759 sensory transduction histidine kinasechromosome CDS971923 2274 + 0.66095
NA SRU_2169 HPr kinase/phosphorylasechromosome CDS2683899 912 - 0.648026
NA SRU_1010 hypothetical proteinchromosome CDS1290315 324 + 0.638889
NA SRU_2505 conserved hypothetical proteinchromosome CDS3112564 531 - 0.734463
NA SRU_1122 FixL-related histidine kinasechromosome CDS1412101 1806 - 0.682724
NA SRU_1359 anti-sigma B factor antagonist, putativechromosome CDS1707351 342 - 0.590643
NA SRU_2815 putative addiction module antidotechromosome CDS3475468 231 + 0.606061
NA SRU_1450 nitrogen regulatory protein Cchromosome CDS1803212 1680 - 0.710119
NA SRU_0353 sensory transduction histidine kinasechromosome CDS477692 1089 + 0.660239
NA SRU_0319 conserved hypothetical proteinchromosome CDS427842 597 - 0.676717
NA SRU_0152 hypothetical proteinchromosome CDS208326 1629 - 0.685083
NA SRU_1535 response regulatorchromosome CDS1913339 540 + 0.587037
NA SRU_0835 two-component hybrid sensor and regulatorchromosome CDS1061013 2739 + 0.647317
NA SRU_2831 two-component sensor histidine kinasechromosome CDS3497168 1506 + 0.7251
NA SRU_0089 membrane bound his kinase Achromosome CDS112163 1710 - 0.677778
NA SRU_2514 HD domain protein, putativechromosome CDS3126625 804 + 0.679105
NA SRU_2725 two-component system sensor protein, putativechromosome CDS3369377 1140 + 0.680702
NA SRU_0677 response regulator receiver domain proteinchromosome CDS882212 654 - 0.646789
NA SRU_2322 DNA-binding response regulator/sensor histidine kinase, putativechromosome CDS2892573 2454 - 0.705379
NA SRU_0175 putative anti-sigma factorchromosome CDS244773 1122 - 0.736185
NA SRU_0739 Low molecular weight protein-tyrosine-phosphatasechromosome CDS951619 540 + 0.657407
NA SRU_2137 sigma factor regulatory protein, FecR/PupR familychromosome CDS2644331 1203 - 0.704904
NA SRU_2250 putative transmembrane sensorchromosome CDS2789035 1041 + 0.698367
NA SRU_0749 response regulatorchromosome CDS960869 747 - 0.676037
NA SRU_2599 methyl-accepting chemotaxis proteinchromosome CDS3225692 2799 - 0.695963
NA SRU_2492 PhoP3 response regulatorchromosome CDS3096971 741 - 0.662618
NA SRU_2760 hypothetical proteinchromosome CDS3414787 1074 + 0.711359
NA SRU_0834 Two component system histidine kinase, putativechromosome CDS1056663 3432 - 0.662296
NA SRU_2790 response regulator receiver:histidine kinasechromosome CDS3450194 702 - 0.609687
NA SRU_1455 protein kinase domainchromosome CDS1810998 1950 - 0.717949
NA SRU_2595 methyl-accepting chemotaxis proteinchromosome CDS3220141 2034 - 0.698132
NA SRU_2788 two-component response regulatorchromosome CDS3447954 690 - 0.633333
NA SRU_1241 histidine kinase PhoR1chromosome CDS1556762 1791 + 0.625349
NA SRU_0016 serine/threonine protein phosphatasechromosome CDS16451 663 + 0.631976
NA SRU_0697 GAF domain proteinchromosome CDS907202 513 - 0.684211
NA SRU_0865 sensor histidine kinasechromosome CDS1107483 969 - 0.651187
NA SRU_1175 alkaline phosphatase synthesis transcriptional regulatory proteinphoPchromosome CDS1484028 762 - 0.639108
NA SRU_1315 universal stress protein familychromosome CDS1654556 966 + 0.702899
NA SRU_0075 sensor histidine kinase with multiple PAS and a response regulator receiver domainchromosome CDS84966 2409 + 0.707763
NA SRU_0158 methyl-accepting chemotaxis transducerchromosome CDS216651 1545 + 0.654369
NA SRU_0457 putative RNA polymerase-binding protein DksAchromosome CDS614557 477 + 0.66457
NA SRU_0256 (p)ppGpp 3-pyrophosphohydrolasechromosome CDS342129 372 + 0.626344
NA SRU_1358 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain proteinchromosome CDS1706835 450 - 0.611111
NA SRU_2132 HD domain proteinchromosome CDS2636765 846 + 0.700946
NA SRU_0142 universal stress protein, putativechromosome CDS191423 1080 - 0.708333
NA SRU_2832 GAF domain proteinchromosome CDS3499217 1932 + 0.68323
NA SRU_2628 sensory box sensor histidine kinase/response regulatorchromosome CDS3254500 4332 - 0.7006
NA SRU_1022 mitochondrial benzodiazepine receptor/sensory transduction proteinchromosome CDS1301960 495 + 0.678788
NA SRU_0483 histidine kinase DhkJchromosome CDS654039 4041 - 0.656273
NA SRU_2866 hypothetical proteinchromosome CDS3548159 498 + 0.626506
NA SRU_0750 Histidine kinase familychromosome CDS961658 1140 - 0.67193
NA SRU_2603 hypothetical proteinchromosome CDS3232517 1035 - 0.657971
NA SRU_1992 putative 22-domain light-and oxygen-sensing histidine kinasechromosome CDS2462171 477 - 0.666667
NA SRU_2512 Two component system histidine kinasechromosome CDS3121873 2268 - 0.669312
NA SRU_0095 utilizing regulatory protein tutCchromosome CDS121196 3204 - 0.668539
NA SRU_2726 LytTr DNA-binding domain familychromosome CDS3370494 753 + 0.689243
NA SRU_0129 putative light-and oxygen-sensing transcription regulatorchromosome CDS170200 1284 - 0.67134
NA SRU_1462 methyl-accepting chemotaxis proteinchromosome CDS1821854 1950 + 0.665128
NA SRU_2008 sensory box histidine kinase/response regulatorchromosome CDS2484929 3627 + 0.683485
NA SRU_0170 sensor histidine kinasechromosome CDS231996 1953 + 0.621096
NA SRU_2065 two-component system sensor histidine kinase/response regulator, hybrid, putativechromosome CDS2558088 3231 - 0.616837
NA SRU_0854 mutant NtrC-like activatorchromosome CDS1097120 402 - 0.626866
NA SRU_2276 PAS domain S-box proteinchromosome CDS2830774 3468 + 0.672434
NA SRU_2635 hdig domain protein, putativechromosome CDS3265081 1005 - 0.725373
NA SRU_0892 methyl-accepting chemotaxis proteinchromosome CDS1144102 1455 - 0.694845
NA SRU_0655 sensory transduction histidine kinasechromosome CDS854074 4107 + 0.730704
NA SRU_1737 universal stress protein familychromosome CDS2147157 912 - 0.678728
NA SRU_1314 universal stress proteinchromosome CDS1653520 1050 + 0.659048
NA SRU_1736 universal stress proteinchromosome CDS2146212 930 - 0.68172
NA SRU_2509 two-component sensor histidine kinasechromosome CDS3115896 2880 + 0.663542
NA SRU_0802 universal stress proteinchromosome CDS1020794 1236 + 0.70712
NA SRU_0678 sensor protein fixLchromosome CDS883061 1269 - 0.669819
NA SRU_0833 probable chemotaxis transducer, putativechromosome CDS1054200 2094 - 0.678606
NA SRU_2048 putative two-component system sensory/regulatory protein, putativechromosome CDS2533847 2829 - 0.678685
NA SRU_0333 two-component system sensor proteinchromosome CDS443673 3336 - 0.690348
NA SRU_1632 PspC domain familychromosome CDS2027883 672 + 0.644345
NA SRU_2578 HD domain protein, putativechromosome CDS3202544 951 + 0.67613
NA SRU_2789 DNA-binding response regulator, LuxR familychromosome CDS3449275 762 - 0.61811
NA SRU_0472 HTR-like proteinchromosome CDS638191 2208 - 0.666214
NA SRU_2487 two-component sensor histidine kinasechromosome CDS3090968 1326 - 0.676471
NA SRU_0676 universal stress proteinchromosome CDS881226 1014 - 0.696252
NA SRU_2394 sensor kinase protein rcsCchromosome CDS2982441 228 + 0.679825
NA SRU_2326 two-component signal transduction histidine kinasechromosome CDS2899813 1110 + 0.67027
NA SRU_0086 sensory box histidine kinase/response regulatorchromosome CDS105156 2139 + 0.700795
NA SRU_0783 universal stress protein, putativechromosome CDS993415 777 - 0.685972
NA SRU_2427 probable sensor/response hybrid, putativechromosome CDS3030941 372 - 0.672043
NA SRU_0470 sensory histidine protein kinasechromosome CDS630413 6009 - 0.663005
NA SRU_0159 methyl-accepting chemotaxis proteinchromosome CDS218182 1917 + 0.617632
NA SRU_1451 response regulatorchromosome CDS1804895 1458 - 0.689986
NA SRU_1164 conserved hypothetical proteinchromosome CDS1465450 789 + 0.602028
NA SRU_1414 PhoH family proteinchromosome CDS1768902 963 - 0.650052
NA SRU_0259 Histidine kinase familychromosome CDS345525 978 - 0.646217
algR SRU_0416 two-component system, regulatory proteinchromosome CDS561614 741 + 0.700405
ark SRU_0143 adaptive-response sensory-kinasechromosome CDS193235 2175 + 0.676322
ark SRU_0087 adaptive-response sensory-kinasechromosome CDS107353 1956 - 0.688139
atoC SRU_2650 response regulatory proteinchromosome CDS3286199 1482 + 0.68556
cat1 SRU_2258 cationic amino acid transporterchromosome CDS2803852 2343 + 0.673069
cheA SRU_2602 chemotaxis histidine kinasechromosome CDS3230529 1641 - 0.680683
cheB SRU_0336 protein-glutamate methylesterase CheBchromosome CDS450312 3780 + 0.671164
cheR SRU_2605 chemotaxis protein methyltransferasechromosome CDS3234000 879 - 0.653015
cheW SRU_2606 purine-binding chemotaxis protein CheWchromosome CDS3234924 573 - 0.640489
cheY SRU_2604 chemotaxis protein CheYchromosome CDS3233560 402 - 0.574627
dctD SRU_1202 C4-dicarboxylate transport transcriptional regulatory proteinchromosome CDS1513914 1380 + 0.635507
drrA SRU_2488 response regulator DrrAchromosome CDS3092596 738 - 0.663957
drrA SRU_0574 response regulator DrrAchromosome CDS756163 714 + 0.598039
drrA SRU_2491 response regulator DrrAchromosome CDS3096262 681 + 0.61674
drrA SRU_2292 response regulator DrrAchromosome CDS2850392 711 + 0.59775
htr1 SRU_2580 Sensory rhodopsin I transducer (HTR-I)chromosome CDS3204627 1578 + 0.69455
lexA SRU_1177 LexA repressorchromosome CDS1486777 651 + 0.619048
ntrC SRU_2623 nitrogen regulation protein NtrCchromosome CDS3249711 1575 + 0.673651
pilR SRU_1381 two-component system regulatory proteinchromosome CDS1731355 1524 - 0.701444
rrp SRU_1226 response regulatory proteinchromosome CDS1542510 1572 + 0.612595
spoT SRU_1062 RelA/SpoT family proteinchromosome CDS1336119 2241 + 0.615797
typA SRU_0465 GTP-binding protein TypAchromosome CDS621390 1923 + 0.670307
umuD SRU_0304 umuD proteinchromosome CDS406996 423 + 0.704492
usp12 SRU_2261 universal stress proteinchromosome CDS2809953 765 + 0.698039
vicK SRU_1826 sensor histidine kinasechromosome CDS2258546 1239 - 0.673123