Gene list
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COG category: Signal transduction mechanisms
Organism: Carboxydothermus hydrogenoformans Z-2901, Z-2901
Number of genes found: 122
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| Carboxydothermus hydrogenoformans Z-2901, Z-2901 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | CHY_2195 | sensory box protein | SubName: Full=Sensory box protein; | chromosome | CDS | 1975873 | 1590 | - | 0.425157 |
| NA | CHY_2559 | low molecular weight protein-tyrosine-phosphatase | SubName: Full=Low molecular weight protein-tyrosine-phosphatase; EC=3.1.3.48; | chromosome | CDS | 2280339 | 480 | - | 0.45 |
| NA | CHY_1254 | sigma-54 dependent transcriptional regulator | SubName: Full=Sigma-54 dependent transcriptional regulator; | chromosome | CDS | 1116505 | 1893 | + | 0.354992 |
| NA | CHY_0217 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 183770 | 1107 | + | 0.454381 |
| NA | CHY_0135 | HDIG domain protein | SubName: Full=HDIG domain protein; | chromosome | CDS | 117379 | 1206 | + | 0.39801 |
| NA | CHY_0504 | glutamine ABC transporter, glutamine-binding protein | SubName: Full=Glutamine ABC transporter, glutamine-binding protein; | chromosome | CDS | 437331 | 819 | + | 0.411477 |
| NA | CHY_2022 | extracellular solute-binding protein, family 3/sensory box histidine kinase | SubName: Full=Extracellular solute-binding protein, family 3/sensory box histidine kinase; | chromosome | CDS | 1806864 | 1971 | - | 0.378488 |
| NA | CHY_2488 | 5'-nucleotidase domain/Ser/Thr protein phosphatase domain protein | SubName: Full=5-nucleotidase domain/Ser/Thr protein phosphatase domain protein; | chromosome | CDS | 2228035 | 3648 | + | 0.470395 |
| NA | CHY_1045 | putative methyl-accepting chemotaxis protein | SubName: Full=Putative methyl-accepting chemotaxis protein; | chromosome | CDS | 923535 | 819 | + | 0.443223 |
| NA | CHY_0880 | response regulator/sensory box protein/GGDEF domain protein | SubName: Full=Response regulator/sensory box protein/GGDEF domain protein; | chromosome | CDS | 778979 | 2007 | + | 0.424016 |
| NA | CHY_1866 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1673090 | 546 | + | 0.465201 |
| NA | CHY_0394 | transcriptional regulator, Crp/Fnr family | SubName: Full=Transcriptional regulator, Crp/Fnr family; | chromosome | CDS | 338526 | 642 | + | 0.44081 |
| NA | CHY_0910 | transcriptional regulator, truncation | SubName: Full=Transcriptional regulator, truncation; | chromosome | CDS | 804004 | 399 | + | 0.365915 |
| NA | CHY_1318 | sigma-54-dependent transcriptional regulator | SubName: Full=Sigma-54-dependent transcriptional regulator; | chromosome | CDS | 1173289 | 1770 | + | 0.310169 |
| NA | CHY_2566 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 2285775 | 1338 | - | 0.470852 |
| NA | CHY_0372 | sensory box protein | SubName: Full=Sensory box protein; | chromosome | CDS | 318521 | 384 | + | 0.377604 |
| NA | CHY_2502 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 2240206 | 312 | + | 0.339744 |
| NA | CHY_0425 | phoH-like protein | SubName: Full=PhoH-like protein; | chromosome | CDS | 366443 | 978 | + | 0.428425 |
| NA | CHY_0216 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 182543 | 1107 | + | 0.402891 |
| NA | CHY_0962 | HDIG domain protein | SubName: Full=HDIG domain protein; | chromosome | CDS | 851535 | 1119 | + | 0.424486 |
| NA | CHY_0091 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 77959 | 1458 | + | 0.392318 |
| NA | CHY_2219 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 2002973 | 1659 | - | 0.395419 |
| NA | CHY_0126 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 110079 | 408 | + | 0.382353 |
| NA | CHY_0881 | HD domain protein | SubName: Full=HD domain protein; | chromosome | CDS | 781228 | 1077 | + | 0.321263 |
| NA | CHY_1413 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 1265186 | 687 | - | 0.419214 |
| NA | CHY_1367 | C4-dicarboxylate response regulator | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 1225091 | 663 | - | 0.396682 |
| NA | CHY_1023 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 902757 | 1860 | + | 0.460215 |
| NA | CHY_1969 | HDIG domain protein | SubName: Full=HDIG domain protein; | chromosome | CDS | 1759413 | 1524 | - | 0.391076 |
| NA | CHY_2097 | peptidase, homolog | SubName: Full=Peptidase, homolog; | chromosome | CDS | 1880852 | 939 | - | 0.367412 |
| NA | CHY_2028 | GGDEF/GAF/HDIG domain protein | SubName: Full=GGDEF/GAF/HDIG domain protein; | chromosome | CDS | 1810781 | 1653 | + | 0.372656 |
| NA | CHY_0605 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 523579 | 1596 | + | 0.415414 |
| NA | CHY_0581 | sigma-54 dependent transcriptional regulator | SubName: Full=Sigma-54 dependent transcriptional regulator; | chromosome | CDS | 499069 | 2019 | - | 0.423972 |
| NA | CHY_0705 | GGDEF domain protein | SubName: Full=GGDEF domain protein; | chromosome | CDS | 619842 | 1962 | + | 0.412334 |
| NA | CHY_0082 | universal stress family protein | RecName: Full=Universal stress protein; | chromosome | CDS | 70812 | 450 | + | 0.468889 |
| NA | CHY_1905 | HD domain protein | SubName: Full=HD domain protein; | chromosome | CDS | 1705261 | 1233 | - | 0.385239 |
| NA | CHY_1333 | putative sigma-54-dependent transcriptional regulator | SubName: Full=Putative sigma-54-dependent transcriptional regulator; | chromosome | CDS | 1192248 | 1569 | - | 0.40153 |
| NA | CHY_2492 | HD domain protein | SubName: Full=HD domain protein; | chromosome | CDS | 2235377 | 492 | - | 0.353659 |
| NA | CHY_1906 | sensory box/GGDEF domain/EAL domain protein | SubName: Full=Sensory box/GGDEF domain/EAL domain protein; | chromosome | CDS | 1706550 | 2310 | - | 0.368398 |
| NA | CHY_1547 | sigma-54 dependent transcriptional regulator | SubName: Full=Sigma-54 dependent transcriptional regulator; | chromosome | CDS | 1383255 | 2199 | - | 0.386539 |
| NA | CHY_0657 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 569788 | 1284 | + | 0.446262 |
| NA | CHY_1412 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 1263727 | 1467 | - | 0.378323 |
| NA | CHY_1018 | chemotaxis response regulator | SubName: Full=Chemotaxis response regulator; | chromosome | CDS | 897955 | 366 | + | 0.428962 |
| NA | CHY_1960 | anti-sigma F factor | SubName: Full=Anti-sigma F factor; | chromosome | CDS | 1752592 | 429 | - | 0.417249 |
| NA | CHY_1875 | sensory box protein | SubName: Full=Sensory box protein; | chromosome | CDS | 1680513 | 1836 | - | 0.398148 |
| NA | CHY_0549 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 478421 | 216 | + | 0.398148 |
| NA | CHY_2489 | putative methyl-accepting chemotaxis protein | SubName: Full=Putative methyl-accepting chemotaxis protein; | chromosome | CDS | 2231738 | 1242 | - | 0.455717 |
| NA | CHY_0885 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 784441 | 891 | + | 0.398429 |
| NA | CHY_1961 | anti-sigma F factor antagonist | RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage II sporulation protein; | chromosome | CDS | 1753010 | 342 | - | 0.388889 |
| NA | CHY_0716 | regulatory protein, PemK family | RecName: Full=mRNA interferase; EC=3.1.-.-; | chromosome | CDS | 633465 | 351 | + | 0.433048 |
| NA | CHY_0074 | EAL domain protein | SubName: Full=EAL domain protein; | chromosome | CDS | 63684 | 1170 | + | 0.410256 |
| NA | CHY_1125 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 998499 | 618 | + | 0.412621 |
| NA | CHY_0103 | HD domain protein | SubName: Full=HD domain protein; | chromosome | CDS | 89376 | 924 | - | 0.371212 |
| NA | CHY_1359 | sigma-54 dependent transcriptional regulator | SubName: Full=Sigma-54 dependent transcriptional regulator; | chromosome | CDS | 1216772 | 1722 | + | 0.355401 |
| NA | CHY_2441 | HDIG domain protein | SubName: Full=HDIG domain protein; | chromosome | CDS | 2184410 | 1242 | + | 0.401771 |
| NA | CHY_1589 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1429350 | 828 | - | 0.324879 |
| NA | CHY_1343 | putative serine/threonine protein kinase | SubName: Full=Putative serine/threonine protein kinase; | chromosome | CDS | 1201771 | 2295 | + | 0.35512 |
| NA | CHY_2046 | sensory box histidine kinase | SubName: Full=Sensory box histidine kinase; | chromosome | CDS | 1831857 | 1350 | - | 0.388889 |
| NA | CHY_1029 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 908455 | 1944 | + | 0.420267 |
| NA | CHY_0017 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 14277 | 495 | + | 0.389899 |
| NA | CHY_2634 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2336912 | 303 | - | 0.333333 |
| NA | CHY_2083 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 1869567 | 342 | - | 0.377193 |
| NA | CHY_0719 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 635756 | 384 | + | 0.388021 |
| NA | CHY_1858 | GGDEF domain protein | SubName: Full=GGDEF domain protein; | chromosome | CDS | 1667934 | 654 | - | 0.347095 |
| NA | CHY_0886 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 785982 | 816 | + | 0.394608 |
| NA | CHY_1479 | putative serine/threonine protein phosphatase | SubName: Full=Putative serine/threonine protein phosphatase; | chromosome | CDS | 1320378 | 744 | - | 0.419355 |
| NA | CHY_1697 | putative prophage LambdaCh01, repressor protein | SubName: Full=Putative prophage LambdaCh01, repressor protein; | chromosome | CDS | 1513491 | 765 | + | 0.347712 |
| NA | CHY_0530 | putative phosphoesterase | SubName: Full=Putative phosphoesterase; | chromosome | CDS | 461294 | 726 | - | 0.428375 |
| NA | CHY_0140 | GGDEF domain protein | SubName: Full=GGDEF domain protein; | chromosome | CDS | 121602 | 1632 | + | 0.405024 |
| NA | CHY_1507 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1348036 | 642 | - | 0.367601 |
| NA | CHY_0160 | HDIG domain protein | SubName: Full=HDIG domain protein; | chromosome | CDS | 132380 | 1329 | + | 0.363431 |
| NA | CHY_2106 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 1887403 | 153 | - | 0.444444 |
| NA | CHY_0083 | putative carbon monoxide oxidation system transcription regulator CooA-2 | SubName: Full=Putative carbon monoxide oxidation system transcription regulator CooA-2; | chromosome | CDS | 71306 | 387 | - | 0.410853 |
| NA | CHY_0883 | HD domain protein | SubName: Full=HD domain protein; | chromosome | CDS | 782712 | 1311 | + | 0.290618 |
| NA | CHY_0965 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 854332 | 1569 | + | 0.439771 |
| NA | CHY_2035 | CBS/cyclic nucleotide-binding domain protein | SubName: Full=CBS/cyclic nucleotide-binding domain protein; | chromosome | CDS | 1820977 | 1896 | + | 0.415084 |
| NA | CHY_2567 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 2287096 | 711 | - | 0.376934 |
| NA | CHY_1124 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 997163 | 1356 | + | 0.366519 |
| NA | CHY_1317 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1172649 | 657 | + | 0.327245 |
| NA | CHY_2467 | GGDEF domain protein | SubName: Full=GGDEF domain protein; | chromosome | CDS | 2210398 | 1821 | - | 0.378364 |
| NA | CHY_2047 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 1833209 | 696 | - | 0.41092 |
| NA | CHY_0092 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 79413 | 705 | + | 0.442553 |
| NA | CHY_1017 | chemotaxis protein CheC | SubName: Full=Chemotaxis protein CheC; | chromosome | CDS | 897319 | 606 | + | 0.465347 |
| NA | CHY_0905 | HDIG domain protein | SubName: Full=HDIG domain protein; | chromosome | CDS | 798974 | 1680 | + | 0.37619 |
| NA | CHY_1296 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 1153091 | 1560 | + | 0.400641 |
| NA | CHY_0935 | sensory box histidine kinase | SubName: Full=Sensory box histidine kinase; | chromosome | CDS | 825901 | 1221 | + | 0.342342 |
| NA | CHY_0703 | response regulator/ANTAR domain protein | SubName: Full=Response regulator/ANTAR domain protein; | chromosome | CDS | 617815 | 588 | + | 0.418367 |
| NA | CHY_0212 | putative stage II sporulation protein E | SubName: Full=Putative stage II sporulation protein E; | chromosome | CDS | 176242 | 2400 | + | 0.437917 |
| NA | CHY_2001 | putative sporulation protein | SubName: Full=Putative sporulation protein; | chromosome | CDS | 1788526 | 582 | - | 0.453608 |
| NA | CHY_2485 | N-acetylmuramoyl-L-alanine amidase | SubName: Full=N-acetylmuramoyl-L-alanine amidase; | chromosome | CDS | 2224119 | 1857 | - | 0.45342 |
| NA | CHY_0209 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 174745 | 234 | + | 0.42735 |
| NA | CHY_1510 | ACT domain protein | RecName: Full=UPF0237 protein CHY_1510; | chromosome | CDS | 1350390 | 276 | - | 0.351449 |
| NA | CHY_2218 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 2002221 | 756 | - | 0.387566 |
| NA | CHY_2006 | putative sporulation protein | SubName: Full=Putative sporulation protein; | chromosome | CDS | 1791347 | 504 | - | 0.404762 |
| NA | CHY_1025 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 905506 | 975 | + | 0.375385 |
| NA | CHY_0949 | GGDEF domain protein | SubName: Full=GGDEF domain protein; | chromosome | CDS | 839298 | 930 | - | 0.372043 |
| NA | CHY_0839 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 747332 | 522 | + | 0.475096 |
| NA | CHY_1855 | sigma-54 dependent transcriptional regulator/response regulator | SubName: Full=Sigma-54 dependent transcriptional regulator/response regulator; | chromosome | CDS | 1663641 | 1332 | - | 0.440691 |
| NA | CHY_1376 | sigma-54 dependent transcriptional regulator | SubName: Full=Sigma-54 dependent transcriptional regulator; | chromosome | CDS | 1233553 | 1443 | - | 0.372141 |
| NA | CHY_1856 | sensor histidine kinase | SubName: Full=Sensor histidine kinase; | chromosome | CDS | 1664956 | 1809 | - | 0.413488 |
| NA | CHY_0302 | sensory box histidine kinase | SubName: Full=Sensory box histidine kinase; | chromosome | CDS | 264586 | 1704 | + | 0.383216 |
| NA | CHY_0606 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 525167 | 681 | + | 0.418502 |
| NA | CHY_0134 | signal tranducer domain protein | SubName: Full=Signal tranducer domain protein; | chromosome | CDS | 116625 | 753 | + | 0.40239 |
| NA | CHY_0709 | response regulator protein | SubName: Full=Response regulator protein; | chromosome | CDS | 625412 | 573 | + | 0.418848 |
| NA | CHY_0658 | DNA-binding response regulator | SubName: Full=DNA-binding response regulator; | chromosome | CDS | 571061 | 756 | + | 0.445767 |
| cheA1 | CHY_0967 | chemotaxis protein CheA | SubName: Full=Chemotaxis protein CheA; | chromosome | CDS | 856412 | 2097 | + | 0.441106 |
| cheA2 | CHY_1033 | chemotaxis protein CheA | SubName: Full=Chemotaxis protein CheA; | chromosome | CDS | 913332 | 2703 | + | 0.392527 |
| cheB1 | CHY_0968 | protein-glutamate methylesterase CheB | RecName: Full=Chemotaxis response regulator protein-glutamate methylesterase 1; EC=3.1.1.61; | chromosome | CDS | 858495 | 1023 | + | 0.468231 |
| cheB2 | CHY_1031 | protein-glutamate methylesterase CheB | RecName: Full=Chemotaxis response regulator protein-glutamate methylesterase 2; EC=3.1.1.61; | chromosome | CDS | 911897 | 1065 | + | 0.444131 |
| cheD | CHY_1015 | chemotaxis protein CheD | RecName: Full=Probable chemoreceptor glutamine deamidase CheD; EC=3.5.1.44; | chromosome | CDS | 896056 | 480 | + | 0.477083 |
| cheR1 | CHY_1016 | chemotaxis protein methyltransferase | SubName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; | chromosome | CDS | 896535 | 765 | + | 0.407843 |
| cheR2 | CHY_1028 | chemotaxis protein methyltransferase | SubName: Full=Chemotaxis protein methyltransferase; | chromosome | CDS | 907594 | 816 | + | 0.366422 |
| cheW1 | CHY_0966 | chemotaxis protein CheW | SubName: Full=Chemotaxis protein CheW; | chromosome | CDS | 855924 | 471 | + | 0.40552 |
| cheW2 | CHY_1030 | chemotaxis protein CheW | SubName: Full=Chemotaxis protein CheW; | chromosome | CDS | 910423 | 1488 | + | 0.383065 |
| cheY1 | CHY_1026 | chemotaxis protein CheY | SubName: Full=Chemotaxis protein CheY; | chromosome | CDS | 906494 | 363 | + | 0.393939 |
| cheY2 | CHY_1032 | chemotaxis protein CheY | SubName: Full=Chemotaxis protein CheY; | chromosome | CDS | 912975 | 357 | + | 0.361345 |
| cooA-1 | CHY_1835 | carbon monoxide oxidation system transcription regulator CooA-1 | SubName: Full=Carbon monoxide oxidation system transcription regulator CooA-1; | chromosome | CDS | 1644960 | 654 | - | 0.38685 |
| csrA | CHY_0975 | carbon storage regulator | SubName: Full=Carbon storage regulator; | chromosome | CDS | 863314 | 219 | + | 0.424658 |
| cstA | CHY_2217 | carbon starvation protein A | SubName: Full=Carbon starvation protein A; | chromosome | CDS | 2000301 | 1788 | - | 0.427852 |
| lexA | CHY_1378 | LexA repressor | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 1235214 | 615 | + | 0.386992 |
| prkA | CHY_1200 | prkA protein | SubName: Full=PrkA protein; | chromosome | CDS | 1065661 | 1896 | + | 0.39346 |
| relA | CHY_2223 | GTP pyrophosphokinase | SubName: Full=GTP pyrophosphokinase; EC=2.7.6.5; | chromosome | CDS | 2005983 | 2151 | - | 0.433752 |
| spo0A | CHY_1978 | stage 0 sporulation protein A | SubName: Full=Stage 0 sporulation protein A; | chromosome | CDS | 1767243 | 792 | - | 0.405303 |
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