Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Desulfovibrio desulfuricans G20, G20

>Dde_0463 cyclic nucleotide-binding domain (cNMP-BD) protein
MEDFWRIRATDTAWKGVLHLASPRRYSRGEVIIRAGEMVDSLFYLESGEV
RMIRTSMEGSEKILMYIEEGTLFGETPFFTGQPILSTFVCSRPAVIWRFS
RHSVYADLLPNHPEIVSSLLHTFAAKVSTLSNQSASLGLQNVAERLCTFL
YVTSGESISGAHGAELKLSMKMRDIANLLGVHRTTLYKAIRDLEKEGVLE
NFTRDSVRIADVTRFLEMVHK
>Dde_3224 hypothetical protein
MRRFGPAGCRGGRNHNTCPPPEGRTLYRARDGKIMGVCKGLAEYFEVEPV
WIRLFTILGALATGIWPALGIYILAGLLMKPKPVMPVRDIHEGEFYSSYV
SSRKAALARLKEQFARLDRRIRRMEDAVTSRDFDWQRRFDDRR
>Dde_1073 diguanylate phosphodiesterase (EAL domain)
MNQLFSAPVHGRCPRCEGTPERIPDSGVLYICPPIIPSCEALRRYLQQKA
MPYTEVYQDIFAIPFDRMSLEFFCEEYLEHIGSLEQKDTRSLLLAHGEEL
TVRHVARMRPLETIVARLQGEWLIDMLDNGRLETHFQPIVNAASPADVHA
YECLARGIDEDGAIIGPARMFGVAKSADLLFNLDRACRLAAIDGMGRYGL
DRPLFINFNPATIYNPVYCLQTTMNAISKAGLQPDMVVFEVVESDEVQDV
NHLLNILRYYRDHGFKVALDDLGAGFSSLNLLARLKPDYVKLDMGLVHDV
HREEYKAVITGNLLAMARGLGIKTIAEGVETEGEWRWLAAHGADYVQGFL
FARPAAPPDAVKVPCCP
>Dde_0369 methyl-accepting chemotaxis sensory transducer
MLDIRICSSALWRVFFHAFKGGGIVNCFKTIKGKITGIIVICIVSMLCIL
GLSVGTLAKLHGSFVSMKENTLDGKVATTAINRDINYVSRLTRNIMLGSD
ADKDIDKLQKRIEAIEKNFVILEGGAVGAEERQLVAKAKRAALAFVQDGL
RFATKMQSIPEGMRHLQYAEYGQSATPLAQQSRKYFGELTTIKDKAYDNE
VYRFKDTIAFLKWCIIGVSAGIIVLIVTLCLLLMRSIIRPLGELTAYTGA
VAAGDYSCSIDSTRFSGELGETAVSVHTMVDSLRRSMTEAEEHSAQADEK
AEQARKATLEAEEERTRITSLLNMMHDLTSQVAAIVDELNVEAAGLESDS
NEIAAGAQAQHARSQETATAMEEMTATIAEVARNASLAARNVTQSKADAE
SGFAVVQQVITATNDVHVQTTRMQETLGELSHRVEGIGDIMGVITDIADQ
TNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATREVGEAIKGI
QAGAGANVESMNKVSEAVAHNNALTNEAGAALEAITALVGESAVQVTSIA
TAAEQQSAACEEVNEATAAVNRICAQTSEGISRSVQRIRNIAALTAELHG
LTDKISDGSAA
>Dde_1752 methyl-accepting chemotaxis sensory transducer
MRFLDSKSIELKLTLSSVVFLLPIAVLLYAFVAGIRYDIRFSELEIYGNR
YQRPLQHALAAFPDVTGGLVTEDTAKVKAALAVIDSNLRSLAPVHAEVGD
DLQFTPQGLALRDREDLLYSAVMNRWKKLAGGVEQSMLPDVRRMITDIGR
MVTHGGDTSNLILDPDLDSYYLMDITLLAVPAAHIRLATIAETGSRLLRS
QSVSRQEATELSIFAAQLKNDQERIQASFDTAMNEDQNFYGESPSLHKNI
PPAFKQYAKANTALAAQLESMAAGNVPDGFMNSVSALSGSLAVLWDAADA
EMTILLEKRISHYRNELYSSLALTLVALIMACFIVWASGSSIVKSLSVLV
DYAERINGGDLTAEVHGVFSSSLLPLKNSIQSTVARLSAEKQSVLAQVEE
ARQKAQEAQVALNRTEEEQTALQEQKAELAGVGLKVNKLAEQVSVSSEIL
SSSADHQARGAEAQKEESEIVAAAIRQMMTTVNEVAGNASSTSHTASEGA
ESARRGVGLVTGAIEAVRSVSSSAEHLASVLNSLDGKAEEIGRIISVIND
IADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATKEVENA
IVQIQTGSTAAVRSMDETKVHVEKSSKLSEDAGKALEDIMNNIEEMTARI
SQIATAAEEQSAATEEISGRIDKIYEIAVDAYEFSHEANRESTALVRLST
ELHTLSSKFKNEQTDEGLLHESSGKMRGILPKIFMNFIKEIYGDDVFAHV
SKTMGEPVFMPGNSYPDQVLRQMAEIVCQRTGEQPKLFFEKAGRASLQAF
NRMYRQYFKGETLKEFLLAMNDIHRHLTKDNPGVRPPKFEYDDQGDTLVM
TYKSQRDYGEYFVGIIKAAAEFKKEKVRISSEHAGKGRTTARVTFIK
>Dde_1697 periplasmic sensor hybrid histidine kinase
MKSSPPAHTGLQRGRLLFLLPALALAAFIVCLISFVYISQRQTLEARQLR
IMAQAERQASAISHLIGEIKLDAALLFRQQDFIDFSDSTPKSVQPGQTHP
AGREAVRRLLTDFIASKALSGERLYNRIVLFSSTGRMLMDTSANKEPVHL
PAGIARALASDVDYPLVFSLTPEIKELTFAVPLVTDSTRAGYAVVFCNTR
AVTSFLESLWDLNDAYILLLQGQSGIALHRAEQISPEWIRQASRLEPGLL
YTLSSEGEPEMLQHGAATSRETGIRHHVDNSPFDLLLVFSGPSIGGAVSP
NVTLVAVALLAAIIAVSFYHVFRSTMRAREHKARAEAAAASEKRILQQNA
LLNAEIEERIKAEHALREAKELAEEADKAKGEFLANISHEFRTPMNAIIG
MSEVILKTELSAPQRNHLTVLNKAAHSLLDLLNTILDFSRYESGKATLAL
SPFMLHAPFTQVHEMFLSAAAAKGLPLQLELAPDMPRAVEGDEGKIRQIL
VNLVSNALKFTDTGNITITCKAFPAPSGRADICFSVSDTGIGIEKEKHSA
IFDSFTQADGSYTRTYGGTGLGLSICKLLADMMGGSITVRSAPRQGSTFT
VCLPLKAVPEERVFPAAENPAVRPSKAASPLSVLVAEDNEFNREVIREIL
GLSGHSSTLVQNGEQALQALSTQDFDVVLLDIQMPVMDGVQTAQKIRSGA
CGNRNAGIPIIALTAHSMEGDKKRFLQAGMTEYLAKPVTPDHLNHVLGKY
APLPAAAPTGQSSAAHGFQPAAGKGSTAQADAEIPPPDLSLALSMLNGKQ
KVLTVMLGTFVRTMPDRIAALHDALQKKDIQALAEQGHALKSTLHSIGSL
PGRSVAEQLENAGRSGNTEAAVTLAPRLIHVLEFMTEHLRRQIDSSQSHH
QPSSGGR
>Dde_2355 two component transcriptional regulator, Fis family
MSEHILLIEDDNAFQEMLSEALRSRGYAVSSASRAEEGISMARQHDFDLI
LTDVMLPGMSGVEAIPQLREAAPGSDIIVMTAYSTRELALEAIRLGAYDF
FSKPFSLKELDIVVRRALEKRRLQKEVTTLRETLRHDSPVQRIIGDSAPM
RAVKTLVEKVAPLDSTVLITGESGTGKELVSDTLRALSGRAGAPFVKVNC
AAIPEHLFENELFGHEKGAFTGATSAQPGKFELAHGGTLLLDEIGDMPAA
IQPKLLRAVEEKQIERLGGRRPVAVNVRIIAATNQNLRELVARKAFREDL
YYRLGVAVIMLPPLRDRKEDIPRLAEHILRKLGLTLGIPVHGITAAAVQA
LMNHHWPGNVRQLANLLERAAISAQGRITAQDIAAALAVQNGTSPQPCTA
QSPHDAPAAEDCLRMPLRETLHQMERNLLLEALRRAEGSQKNAAALLGLT
PKNMWAKLQKHQIRI
>Dde_1031 metal dependent phosphohydrolase
MSAVKSTIPDNISEEYYQISIEILNSFPKYRPPLDLFRFREDIAQLQPLF
RKGERLSNENIEQLRELCIGGDVFVARSDRAIYSKHIIKQLDLVLVDDNL
KPAEVAEICIMALGQRLSDFLEQPVKPVFDLFYRDVMVFTEYIWQDRHRL
RSFMRRVSRTHTLVSHSLNTLFVGLWLLLETDATLKRRLLDRAALALLLH
DLGMAKVPAFILSKTTPLKLEERDKITPHPLIGAKIMHKLGLAFDEMRQA
QMEHHERLDGSGYPQKLGADRVSRMGRIAAVADSFSAMICQRPYAKAMDP
MTAAAHLAKDRQKYDPKYTAKLQTAVAQNLFEPPAQTSPPAA
>Dde_2793 protein tyrosine phosphatase
MNILFLCTGNSCRSQMAEGWARHLKADIFNAYSAGVKKHGLNPLAVKAMA
EAGVDISKQESKTIDELPQDVEFDYVVTVCNNAHEQCPFFPAKSKIVHVG
FDDPPALAKNVNNEEEALQIYRRIRDEIKIFVSNLPDCVVTNSV
>Dde_0744 putative PAS/PAC sensor protein
MDVTTEKLRERIAELEARNSELVRQCGIYRTRIGELESAVAGPLAAADVF
FGRDAGMGGEAVWLLRDGTSGRFLFAGPEFSSVLGGSAALLYEDPHYIET
FVHPDDTALLHALFSDGHKGTGGGRTRSFRLVSHKDGRTLTAALHRHTDE
HGGVLDTVVAASDCGWRLLSFRRFETFFRAFLDAVPEPLALLDAAGGIVA
ANRASAARHRVPFMRYLGGRLTDFLSEAAAERRLHAMNESQRTRRSVVFR
EVQEASRYECVIFPVLGVSSDTPLFGLLERDVTERESVRQTLVRINRDLE
ARVRGRTKALEVEVQERKRMEQRLLREREFIKLLVQASPNLISVFDSRGA
LMFANRAWREFYGLPGDVWGVADAGPRMCGYFGAVDREVLQEGRVAQLEE
RIVGTGGRREWFDVIRAPITMPDGETLLLFIGINVTSRVCYRTMILSPLS
GTIEMSSHEDTW
>Dde_0160 ATP-binding region, ATPase-like
MTTGILLITLIERFGLMVAGAFMLLSISPVQKLRRDTNSPLQKSFCILFF
GLFGILGTYSGNAIFESVANLRAMAVITAGLFGGPAVGLGAGLMAGLHRN
IIDPGGFSALPCGLATVLEGLFAGLVAWRVKESMDWRLAAMLGLVGETVH
MILVLALSRPFPQAVELVKVIGMPMIVVNSLGAALFVQIINLVSKGRERR
ESSHAEQILSIANQTVSHLRSGLNRETAAATARIIYDNIPLAAVSITDTE
TVLAHIGAGDTHHLVDKPIQTEATRRVLHSGQPTFLSGKRQIACGHPGCP
LNSAIIIPLRKGDTVTGTLKFYGSQSEPLDSIRFEIAKGLGGLFSTQLEL
EDIHLKARMLAHAEIRRLQAQINPHFLFNSLNTIASFCRTNPDKARELLL
DLSRYMRRSLDSSRGFVPLYEELEQVASYLAIEQARFGDRVRVDVTIEPD
CTDWPIPPLIIQPIVENGVRHGIARREEGGVITLQVGRDGDELAVRVADN
GVGMDEQQVQRLLARHQTDSHSSGIGVTNCRQRLEQIFGPRYTLNIHSRP
GEGTEVAFRVPKIPMVQ
>Dde_3068 response regulator receiver (CheY-like) modulated CheW protein
MSSEHNILLEAGTNELEVLELFLNHRTDTGQQACYLGVNVAKVMQVIEAP
ALDSPESATNPCFMGIIPLRGLTVPVLDLGKWLGLDVVRHKHDVIMVTQF
SGTTTGFLVSGVTDIHRVGWQSVQPPGRFLAGIGADSVVGIVKMDDKFIQ
LVDLEHIIADLDASTRGQVGTGVTAPRRYKAIVSDDSPSIRNMLVANLKA
ANIEPMIATNGQEALTMLRAEAARAEEENRPLSDFVDILISDIEMPLMDG
LSLTKTIKQDPLTRNVPVILYSSLITPELRHKGESVGADDQISKPDLASM
AQRIISLLQEKERPA
>Dde_0603 response regulator receiver domain protein (CheY-like)
MANILVLDDVIDAGVLIKRILERKGHSVTAFTEEEEALAHARGNEVDLAI
LDIKLRRMTGVEVLEELKKIRPALKAIMLTGYPTLETARESMKLGANEYC
VKPIDKDELESKVSDVLRG
>Dde_0110 multi-sensor signal transduction histidine kinase
MHFRKKHSLPGPFASPWLVIGAAVILGVVVVALSVRNITRSEQYMANILL
EKGGSLIKAFEAGARTGMRGSAFRLQVLLEEMADQPDIDFIALTDREGNI
VAHSNNEQVGKRLFGAEVTTDLLRPDTRPRWSIFGQAGKRYFVVYREFAP
LQGRHARRGHMMPHMRNHAWDNWQQPDGPPPIIFVGFDVQPFEDARRQDK
QHTMTMAAIVLLLGVAGFISLIWAQNVRRARKELESTQALSDEIVSNLPE
GLVVLDAAGDVSFMNNAARAMLGDGTAAHDAHEAAASCPPLPPVLMHAVR
QLDTQHILSGRETVLSGTGGPVPVSVTGACITGEDGSLMGKLLLLHDLSE
VRRLEEEVRRREKLAAIGSLAAGVAHEIRNPLSSIKGYATYFGTRFAEGS
EDRDAARIMVQEVDRLNRVISDLIGLARPSDLSLKPSRPESLAENVLRLI
RQDAAGKNIDLRFAAADDLPQAVLDPDRVTQALLNVCLNALDAMESGGVL
TLSVDTDSTSSEGRRLLRFKVRDTGCGITPETLSTMFDPYFTTKSQGTGL
GLAIVHKIVEAHGGEIAVQSSVGSGTEISLILPLEPQRNANS
>Dde_0109 two component transcriptional regulator, Fis family
MTNAPTILIVDDDQAHRTMLRTMLRGWQYSAEEADDGSVAVSKVQERAYD
AILMDIRMARMSGIEALRHIMAHNPAIPVLIMTAYSSVNTAVEALKIGAY
DYLTKPLDFDELKLTLERALDHTRLASENRELRSSLSAGQAASRIIGRSE
AVRRLTELVATVAPSDATVLITGESGTGKELVARAIHEGSSRRDRPLVTV
NCAALTESLLESELFGHEKGAFTGADKKRDGRFVQADGGTLFLDELGEMS
LALQAKLLRALQQGEIQRVGSDNPLRVDVRVIAATNRNLTAEVTAGRFRE
DLFYRLNVIGIAVPALRERRDDIPLLAGHFLTRYAERNRKMLKGFTPQAM
NCLVNYDWPGNVRELENAVERAVIMSMGEYVTGRELPPDIAAADGETDIT
AAVPDTDTPLPDTVHDPYAGLSLENLERRAIEATLRECADNKSEAARRLG
ITRATLHNKLKKYGME
>Dde_0774 response regulator receiver domain protein (CheY-like)
MRFLIVEDDFTSRKFLQGILSPHGECDVAVNGREAVEAFEAALEAGTPYH
LVCMDIMMPEMDGQDALKKIRALERSHGVRSVDEVKVVMTTALDDPRSVV
EAYYKGGATSYVPKPIDRQLFIHLLRSLGVVS
>Dde_3456 metal dependent phosphohydrolase
MYRKIKAQDLRPGMYVVDVGLSWLENPYLYMTEGVLADEEAVGRVLSEGY
EEAVIDLRRCLEGSVPDDLAELEPLTDAEHVSRAVSATADSPVSAVAQRV
PVAQEMLAAKAIYSESITFVRGFMEGAREGRPVDLKAAEPLVEDIIQSVS
RNAGALIGFAKLRAYDLYTYTHSLNVSLLAVAFGKYLGLDTVALRQIGLA
GLFHDLGKALIPDFILNCPGRLTPEEFSVMKRHPVLGRDVLPGGGRIPDM
VLEGMLQHHEKFNGTGYPAGLKGDAISEAGRIIAVVDVYDALTSKRPYKN
AMLPNKALSILYSMAGEEFYPGYVEHFIKCIGIYPVGQIVRLNTGQVGVV
SATDPAVPLRPEVIVVRDPLGRPAPPRLIRLADVISVSVTETLEAAHAGI
DAARVLQDGAAS
>Dde_0629 cyclic nucleotide-binding domain (cNMP-BD) protein
MTQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALP
HSAQRPEALRVVQQGAVRLTVAQEDGSPALQDTRGEGDIIGAAALLGRST
ASVHATTLEDTFFIRIPGKTFLGLASEFPAVERYFMRTLPEEYLTRAFDE
MRLRCEGASGSGGLYLFSGLAGDLVHRPPETVVRGTTLQQAAYRMMKSGT
GSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPVIGIVTDKDLR
NAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRA
GRVVGVITAHDIMVVQGRTPFSLFREIMQQRDLRSLHPLGPRVAHVVRAV
VEEGARAAAAVRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGR
REQTFATDQDNALVLEDCPDDIIARAAQVYFDAFCTRAVAELEACGFARC
AGGIMASEPGMRLSVSGWQRRFIRWIHTPEPQELLKSSIFFDFRHGHGHA
PLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRNLVVEKSGDHR
NMLDIKRRGMLPFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCR
EAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLEKRTLKEVFAV
TERLQAFTRQRFKLDVS
>Dde_0218 methyl-accepting chemotaxis sensory transducer
MGIRHKLLLLLGICVAGFGAQFAADRTGNILTQDVLALERLAVDAKEQVL
QVRRQEKNYLLRTDSESLDSARQSLEAIRDSLRRIAAQQPEAARQTERIL
DRLGVYAGAFEAAVQAHSALGNLETGIEHDFIMAARELESAVDALGDKDV
LVVLLQLRRQEKNFVMRGGQLYVDRVDALLKGLERGLAGNSELLDKLRGY
RRTFNAYVEQHGVKARQTALMVEAGQQLEPSILALRENFARQRGDMVARV
EMVTLGVGVGATLFVVVLVLWLLRSIVVSLDALQRYSAAVSGGDLTTVPQ
GEFTGELARLRDDIMAMVSGLRSQMQEVARKEHEALQQAQRAESATQEAL
RKEHEVRSLFGRMQGVAERTAEISGRLAESAAGLHHQAQTAADGAQVQKD
RLTETATAMEEMTATVVEIARNAGSASQAVAVTREKAQQGLGVVARSEEA
MRRVNTIAQALQEDMARSGRDAQSIGQVIDVINEIADQTNLLALNAAIEA
ARAGDAGRGFAVVADEVRKLAEKTMAATREVAERVHTIQSATRQNQASMT
EAVESVDEANRLAAGSAEALREIVRLADDAAGQAQSIAAASEQQSAASEQ
ITRALEAVNSVADTTTEGMHAMLDSADGLARTAQELDGLITELNR
>Dde_2306 extracellular solute-binding protein, family 3
MLKKICLAMLAVMMTANVALAERTIVFAHDATWPPMEYMSADKKVVGYAV
DYMDAVAKEAGFTAEHRNVAWDGIFAGLANGEYDAIASSVSITEQRKRAM
DFSIPYFEVKQAVVLNKSVEAKSFADLKGKTLGAQIGTTGYFAIKKAEGV
TPRSFDEIGLAMEALYNGNIDGVVCDDPVAANYALQQEEYAKRLKIAFIV
EAEEKEYYGVAVNKGNSEVLALIDKGIKAVKEKGIEDQLRKKWIGQ
>Dde_3620 ABC-type amino acid transport/signal transduction systems periplasmic component/domain-like
MTFLPAAARVALLLCAICFCTAAAAAAGQSALPLPRTVTLAVNSATPPYV
LEESGSGLEVDIVRAALKTQGVDVRLLYASQLRMGQLLHEGRVDAITPVS
RMAGMQNVFLSANHISYRNIAVSLRANNCTISAVADLKKYVVQAFQNASR
FLGSEYLNAVRQSPRYMETPDQAGQVLAFFTRQDRVIVLDERIFRHFVHK
IPAEMTDDYVIHTIFPETRYHVAFADAALRNAFNKGLQQIVSDGTYKKIT
SRYPTLCKTRDCYKRKPEKRPYPRSPDM
>Dde_3020 methyl-accepting chemotaxis sensory transducer
MFASIKARVVLGLLFSIAVAIGGVSTIVYFNVNSLSQQAFRESSASQLNR
IDDFMSTFVNDAKYTAAFLASRPELQNAQGKLTVFAGRTQSSKITRDILA
TETERAIFDLFGGIITANPNYDFAFMGSSDSGFVQFPEDTMPAGYDPTKR
PWYREMLASDADTSLSKAYLSTTGKPVGSITAKIRTNGRVSGVVGIDINL
STLTNVTSSITTGKTGYVMLIEDGGVILSDPAQPARSFKNISELNNAALD
TLVKLENGTVDIMLDGVRKLATVHHADSLGWKLVLIQDEAEVFQATRDTL
TNVILLSLGLAVLLLAVAWLLGRSIARPIGLLADSAQVVARGEYDKMPDA
RHFSGELATLHQSMTTMVTELAKTIKEARSKTVEAEEQTLKAEKALEEAR
HAREQADQATRQGMLAAAGQLESIVLQINNASQELSGQIAQASDNAGLQR
ERTAEAATAMEQINATVLEVASNASRAAESAETAKQQADNGGRIVHDVVS
SINQVDGVTRDLQTTLDSLGKQAQDIGQIMNVITDIADQTNLLALNAAIE
AARAGDAGRGFAVVADEVRKLAEKTMHATKEVGSAVTAIQQATKVNIEGM
GNVTQLVGRCTDQASEAGKSLASIVDIVDHTADQVRNIATASEEQSAASE
EITRSTEEVNRIAGDVAEIMNDSNTAVNDLARLADELQGLIEKLKSA
>Dde_2643 universal stress protein UspA-like protein
MQPVKKILYATDLSEDSRHALSYAFSLAQQYGAALHVLHVLPDVKQNYLT
TSGLDFATVFDDATWRLFTPEQLVEAKHKVRERITGICSLEGLADTACMP
VAENIEVAVGQPADVILERAPQFDMVVMGTQGHGRLAGLLLGSVTQKVVS
RCPVPVLVVRLPEADHKV
>Dde_0324 response regulator receiver domain protein (CheY-like)
MTIHVLLVDDEVDFVQTLAERLRIRGMTVDTAHDGEHALQIVNDCGASVM
VLDLRLPGMDGLEVLRHVRKQCPRMQVIMLTGHGGRKDEDSARVIGAYEY
LNKPVDISQLSEVIAAAAEEAALQGAE
>Dde_2447 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(s)
MTQNNNATGPQQISADTFSILAAVYGHSPAGTGVFSHDGALVYANGAWSG
LLGSGALPADFFRLAPGCGALFASVADGSRQRWSGSLPVQLASGRQLFRA
RLFALSGHALLHGLVVAELSGMQQENAPAAGCDVCPSWQLPVQLYAAPHA
LHDRLEAVFSVLMHRLDCSCATLWLAPQGDEPAVLLHAPDGAGARYSSRL
FGASFARHVLAQGDIVVLDKAGAMRLAESGILPADVPLPAAAIAAPLCSP
DGRTMGVLTACRRNSAVRFGMNDARFLRNAANIMATVERIHQSETALRES
ETRFRAVFDHAGLGIVLLTPQGTVKSVNKGAADLASIPAAEMLGLHYSDF
LCADDVTVADRFFHALQGGADEVLTMTSAIRRRHAPPIWCKLTVSRVLDE
GGSLRFIIVQIEDVTDHKREDERLTHMAYHDVLTGLPNRALFLDRLQSAF
NRAQRNASYSFAVLYMDMDGFKDVNDSMGHDAGDALLGMFAERVGNCLRN
VDTLARLGGDEFAVLLDDVPEILQVTHVIERITEAVSSPFMLRGREIRCG
VSIGAVLRGQECSGCGDLLRQADSAMYKAKRRGSNRYVIAGSSDAAAARV
MRKGEQELVTALDSGQLELFFQPVVSLQTGRMDAVEALVRWHHPERGLLA
PGAFLPLAEHAGLQAALDAHVLRLAARAQLAMQEQEARGAAVLSVHVNML
SETLRRPEMPGVLLGVLQEEGAAADRFIFELVENLLVNAAPAVAEGLWRL
RDAGIRLALDGFGSGYSSLAMLRRYPLSLLKVDGSFVRASDADMAARGIV
RSARTLASGFSMKAVAEGVELPEHAELLRELGYSSAQGMYFAAPMRLSRL
LRMHAAGAVFPVMAG
>Dde_1459 extracellular solute-binding protein, family 3
MPKSVIAAIPRPSHMVRFCALFCTVWLFCWLFAFPLQAAPLKVIYGFDRE
FPPFSFEEAQGIPTGFDVDLLKAVLRDKPVKLIMRPLSWDQVLVELSAGN
ITVTSGMAKTAQRELLYRFTERPTLPARVMLFTKNHNRVGNVRLLRGQTV
SVEKGSFQQRVLEGFGGLNVKLFNTKVDALRALYRDEVVAYGGPERTAYY
YIEKLKLGGITTVGTPLRVTDVFYAVNREEPELLKLINDGMLEVMRNGEY
DRIYRKWFVPELLPEERAELIKQATAAAINAYAPYSRVPVGAAVLTRSGK
IFTGCNVENPMLNLTGTALRTATLKAVSEGDIGIRAVVSVGPDGRLLSPS
ASDRQFLYEFGRGILALIEPEKGVYEERMLSELLPEPYVQRPEWQE
>Dde_3295 methyl-accepting chemotaxis sensory transducer
MLKNLGLTWKIMIILVVVVPAMLGLTLYMTGSFTEHMERTAREQSLETAY
RYAGKIDADMSLAMHSARAFARLAESMMGHEGRPTREALRDSMENFLRDH
TNLLGMFAAFEPDVFDGMDSMYRGATYHNKDGRFVPWVHYEGGVIKTIPS
VGYDVDDADGAWYHLPRKTGKEIIMEPWAYEIGGEFVMMVDMLVPLRRNG
RFAGVVGIDYPMGTIDEFVKDIKMFDTGYAFLLSATGTYVAHPQNQLVTD
KANIFSQPQTEAELRAGLKRVQQGEDFSITVERDGKRHLLTFVPIFIGRA
DTPFILGLDVPVAEVLAAAYGMRNNALMIGGVTAVFILLIILYISRVISR
PIQETVRAVEGIASGNLGTRLPADSKDEVGRMQASVNHMAEELARNMGEI
KTQQAAAEEKTRVAEQAMQDAQEARRQAEEARREGMLMAAGRLEQIVAHL
SSASEEISAQSNEIRHGSEIQRDRIASTATAMEEMNATVLEVARNAGETA
DQTNASRASALEGAQVVTESVAAMNSIKTNADALKENMAALGTQAQSIGA
IMTVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGA
TKEVGQSIKAIQQAARQNMEAMEATVERIGHATTLSQRSGEVLHAIVAAV
EQSADRVQSIATAAEQQSATSEEINSAVEEINQITLDTAQAVNEAAIAAE
ELARQAQELSAIIDDMKNQG
>Dde_3536 two component transcriptional regulator, Fis family
MSDIYSILVIDDEESILRLLERELTTQDRIVHTAQNGREGREKLSRQRYD
VVISDIRLPDADGLDLMVELKGIYPDVEFILITGHGNIDNAVEAMRLGAY
DYVTKPFHLDRVELVVERAYQRVCLQRENRSFRHSHSSAPPSKMVGNSAE
IKQIRYLVGKVAPTDVPVLITGESGVGKDVVAHSIQALSTRSGKPFLVKN
CATLQKELMRSELFGHTKGSFTGATDNREGLLAFADTGTLFLDEIGELPP
EVQGALLRVLEAKRYRRVGEKSERQVDIRFLFATSRNLLEEVEAGRFNDA
LFHRINVFNICVAPLRDRKEDIPLLVEHFLGRLGNAMGHNELTVSDKAMQ
CLQHYDWPGNVRELRNVLERSIILSENGIISERSLPRDLVERAEQSGLES
SIFSLEHMEREHITRALAFFNGNRQQASKALGIGRKTLYRKLERYNL
>Dde_1197 putative signal transduction protein
MSQNASNDHMALSEDYVRNFFTYADPDNEAMLQLYRIGVFRTAKALSAGW
IMPDEDARTARNLEYLRDNFEPGDVSVGELVSSETQLASFPDIYFRIRKV
LDSPNSSADDISREISNDLGLTAKLLKLVNSPFYGLAHTVEDVSHAIAIV
GVEEVSTLALGISAINVFKDIPQELIDMKAFWKHSVSCGVFAKLIASRIE
GMKADKFFTAGLLHDVGRLIIFKKMPYASVQLLLYARENQLPVVESEEDH
LGFDHTQVAKQLLTEWKFPASMVDCLAFHHAPSQAQDQLAASILQLADNM
ANAMEISSGGMYLLPGMEEGAWERIPLQGDDLVEIVGLFDSHIEELFKAI
L
>Dde_1264 putative transcriptional regulator, Fis family
MLDSIAPAINRIAQVISIVIGLDVEVVNAEFVRIAGTGRYAEGVGTSIIE
AGQVYRTARRTGRPVYVEKPRFHPICDGCKKKDTCEEKLTLCAPIKIDGK
VEGIIGIICFNEEDRARILKTRDSFLDFVDMMSNIVISAARDQQRITMMS
NTVDMLQSVVDAYSDGVFVFGRDGQLTYVNEHAKRTIRLPDPPLPANLTL
TATGNTVEDADEYELSYNGKELMVMGRTVELAAQDPRFARLVIFEHQRDF
TRRMSRFTSQAHSDGLGAILGNSPAVVRLKERVRSIATSSSTVLIEGESG
TGKELFARAIHKESNRHDQPFIAINCGAIPDSLLESELFGYISGAFTGAR
SSGRIGKFELANGGVLFLDEISSMPLYLQVKLLRVLQERTITRLGSNKLI
NIDIRVIAATNDNLSELIAHNSFRSDLYYRLKVIPFEIPPLRERLEDVDM
LTEHFFRKYGERFGKNLRHIDPQCMDMLKSYPWPGNIREFENAIEFIVNM
MPENGVVTPAVLPPFLHAALRGEKKEQLDRQDDIIPLSELERQAIQRALD
RFGSTTGGKKLAAERLGIGLATLYRKIQLYGL
>Dde_3752 diguanylate cyclase (GGDEF domain)
MAAPFRAVCHGAEDALSCQARKYRYSASTQRTLQHHIMIDIRTVLILNAL
VFLIATGFSYYMYTRKVPVDGVKWLIAGFGCGLVSMVSFFTRGYIPTVYS
VLFGNSLALLFLIIIYNWVRVFLGKEKLTKRQWSFIAAIIAASACTYTYY
VAIDNNIFIRIFIVNTLVGIIGLLCGYTLVRVKDVTFCKITGISCLLHGS
YSIIYGTVSLLSQQSSVEYLQAGPLIKFSVLVSLVFGIMLMMGVSSMINE
RLVQMLEKEARTDPLTGLGNRRALYTAAAHHVARLHRLCEPLVILVMDLD
RFKSVNDKFGHPAGDALLRHFAAILQKQFRGTDQLFRFGGEEFVALLQPS
DERGAVCLAERLRREVAACPLQLGGASIAVTVSIGIANMLPEEPDITRAL
GRADQALYKAKAGGRNRVESSYTVHAADCTEPVPAV
>Dde_2734 methyl-accepting chemotaxis sensory transducer
MRAHFGFQSMALRIILLIAVALTLQAGIFAASSTRSLMGFAETEGERFRA
SETEKRKIQLANMVSVAENTIRSYYERSVDMEALKKEASAPLKRLVDATA
TQMMQHYDRNKIIVPEPSLRSDLLSMVRGIRYDGDNYFFICNAAGTLLAH
PNPSLEGRTLYDMQDKNGVYLFREIIKTAQQKGEGSVSYVWPKNRDANPT
QKITWVRMLPELGWILGTGAWVEDETARLQQEAMEAVAGSVLENGDYFWI
HDTSLHMVRNPLRPELDGTDVSGVQDKRGTALFKAMEEVITASGRGFVEY
WWAKPGQQGEFPKVSHIRLFEPWGWVVGMGVYTDDIDAAVAEEGRKLRTE
AAALRMETLLFSGIFLAVMLVASVLLIRVYLSRPLGSLLEYTASVANGNL
DAQTHDTFRGELKVLRNDLVRMVVSLKEKIHEAAALAGKSEEESERARLA
MQEAEEARGMAEQARKQALHDAAAALEGVVEELAMTTEGFSHQIDEVANS
AQMQSDKLGRTADAIEQMNASMQRVEQNASNASEASSDSRNKAKEGAEVV
RDSVAAMEQVQTMAENLKNDMNALGAQTEAIGRIMTVITDIADQTNLLAL
NAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATGEVGQAVNAIQQATNR
NMDNAQQAAEAIGRATGLVQHSGEALETIVTRSDDAAHQVDMIHEATSEQ
SHASEEVTGAVEEVRRIAAETATDMESAREAIIRLTGLSESLTGMVRKLR
S
>Dde_1261 periplasmic sensor hybrid histidine kinase
MLAPGVACRWYRREEVVLRANASIAGRIGLLLLFLIVFASAIGLTYTYYI
KLVQSDSLAEVKSATVHGYERTLRYSVQSMAAALSDAMTKARERGDNPVD
VLRRTINAVRYDNDGYYFVYDLNGINIVHPLDPAFQGTDRLNHHDKDGVP
YISILASLVRSGGGYVSYSFHKPGETTPLPKLAYAEIIPGTDFWLATGIY
TDNIQNEQEKLAARLDGHINKALMIVGVGVFITLVFFVLPTSLYMVSGIL
KPWRQMERELRHAQKMEAIGIFAGGIAHDFNNILGAISSCSELALEDTPE
DSPVREDLYHVLKAARRGKNLVKRIKTFSQRTELTKTTVQVRYTVQECIQ
LLQTFIPATVEVRLRINAPTAQVKADPDQLLQVLMNLCTNAEQAMRGMKG
LLEITLDMETLDTGHAAPLELPAGRYVVISVRDTGTGMKPVVMKHVFEPF
YTTRKKSGGTGLGLSITQNIVRLHGGRITVDSAPSRGSTFRVYLPCSGMA
EEVQEKQIRSALQRGNESLLIVDDDDDLAYSVGKLFTRLGYKVTSVTRSK
EALELFRRKPHAFDLVLTDQMMPNLTGVELTRELLSIRPDLPVIMYTGFE
GTGNLSRYPKDWRKVGVAAFFYKPFDTAALSAEIRTQLDKHKKHRSTAHA
RSDH
>Dde_2952 two component transcriptional regulator, Fis family
MRIMIIDDNTNSLQSLSVVLSDLGHDPDAFSSPVDALRQARQQYYPLVIT
DIRMPEMDGLSLLTELKAHPATGSSDVVLITGHGDMHTAVEALRKGAYDY
LAKPINARELAAVVERSAEHQALLLENKDLRQNLDARVDKVTGTLKADLE
KVRSRLKRVVGIGNVVAQAPAMRRAMDEARIFHRDPTVPVLLEGETGTGK
EVLARLIHYGDTGTETPFVAINCAAIPHDLFEAELFGHEEGAYTGSRSGG
SPGKLEAADTGTLFLDEVADLPLQLQPKLLRVLEEHTFYRVGGVKKRTFK
ARVICAANQNLAQLVEQGAFRRDLYHRLTVGHITLPPLRSRPEDIPLLAE
MFLLREASRKKKLFREIAPEALAMLQQHRWPGNVRELENAIERAVLINDG
HLLQPRHLRFLQEHTPQEAPCTSAACTCALTPEALTLPEGGLDLEGLITQ
IMRKAVDKFDGNKSKAAAYLGISRFALHRRLQK
>Dde_3599 two component transcriptional regulator, Fis family
MTNDTHILLLDDEKNYLLVLEALLTDAGYKVTAINDPETGLAFLDESDVD
VIVTDMKMPKITGQNVLDHVKKRFAHIPVLIMTAFGSIEGAVEVMKTGAF
DYITKPFSNDELLLSVQNAAELALAHRRYRLLAEAMEQRFGPRQIVGNSR
AIRDVLTMVERAAPSKSTVLITGESGTGKELVARAIHYSSPRKDGPFISV
NCMALNAGVLESELFGHEKGSFTGATAMKRGRFEMAHGGTLFLDEIGELS
HDMQVKLLRVLQERTFERVGGSAPIEVDIRVVAATNKNLLEEVGKGSFRE
DLYYRLNVVQVELPPLRERREDIPLLAAHFVHKYAEDNELPQKNFSPEAL
DYLTGYEWPGNIRQLENIVERCMVLTPSATIGVEDLPHEIRDEETQLKSA
VDLLPVKLDLADTLDKLEAALIRRALVRSEFVQVKAAELLGISKSLLQYK
LKKYGITGH
>Dde_2674 two component transcriptional regulator, LuxR family
MPKTVVIVEDMGIVREGVRALLGGCPGYRIAGEASDGIEALQVVERCAPD
VVLMDIGMPRMDGADAIREIKRRFPRTKVIALTAHNKSALIFRTLHAGAD
GYMLKTGNCETLVGAIQTVLEGRRYISPDISQSLIDSLAGSDPMDFANPI
DTISVREKQVLKLIARGMGNKEIAAELCISHKTVEKHKASLKRKLRVNSN
AEMATLSMEYGLLEP
>Dde_0024 anti-anti-sigma regulatory factor, SpoIIAA
MTVWQSSISDNGALILEGEIDYSVAAQVRTALHRHIESSGGAVVLDMEKV
SYIDSTGLALLIELRRKLQEQSREIRISAASVRVRQLFELTQIAPIFGLR
KDRAD
>Dde_3190 diguanylate cyclase (GGDEF domain)
MTTQEAADRSKTMEWYSECLQLTFPPVMVKLLQALAQPEPDFSVIAELLA
MDPVLAATILELVNSPYYGQRNPVSDMQRAVVVLGSREILKIALSIAYQQ
RVTGALHRKPTELFPDWRMALWSAIAAEKLSAQLAPGDEALAYLAALLKD
LGIFIRQCTRSSDPVLARRRYLTEYSRAHATSEQVHWGKEHQELSAELFS
TWNMPQRFVDAVRHHHAPTLNGLDPFTLCVALATRWAELLQTGQGDHAEL
IRHEMLMAGLLQLDGPGMEALRADCATRFRVLLSSLGIEDAPLSDRLYTQ
TLEDIQRFHFLSTELQRAASYEEAVKMTGRQLHWLWNMKKWEVALRDPSV
NRYVLFRPVPEQGVQPVASSAEVDALPWSRGGVRLPLAAEGDVYGSMNVP
RSKTRLQEEGSLAVYARFLSKGLEIFYTEQSGLRSKARLLDSLPNMVAQV
DATGIIREANTAFLALAGQDSDPRGHALSDVLRNAYGIETESVWRQITAE
TQNNAANKIFTYCTTQGAARTCALLSIFRNLPEQGAFLVRIEDITQVSAL
EAEVLEQNDFLSSLMEAMQEVVFTVDATGRVLWTSSDMLLQAGAMLFDIA
AATTPGAAWGADHLPVQRQADTAEQQTAHPQEKQTPVPVEVAIKLPDGSS
ALYELSVSPLKTRAETARWIIVGRDLTSIRRMEEKMRMQAVFDGLTGLFN
HTHFHMLLDREIARCHRTRHPLALIFLDLDGFKAINDTQGHREGDRILRQ
VSNALRSCIRKGTDFACRYGGDEFTVIVTEFKEDALPAMSARILDAIESG
TSGAVSASVGVALLQSQDSAESLVQRADTASYAAKKAGGRQVAQAPLHPG
SA
>Dde_0434 methyl-accepting chemotaxis sensory transducer
MSFYTRMNTVLLAAGICIVLFPVCSWLILPVQAHTGTFITVYGVLTLTGC
GFIAAGLYQLHAGFSRPLEKLHAYTAALRDSPATVTPQLAGAAELHALAE
EIHRTATALVQNADSYSPAAQAAGTLSEKFEQSTREAQAYRTDVEIMLSS
LHKATQKAGDISGELTGSLRTVTADIDHVTGGISVQNSKTQQIAIAMNEM
NTAVLEVARNAASAASQAARSQEKAQAGSREVHKALELITDVEENIGALK
TTMDELGAQAESIGVVLNVINDIADQTNLLALNAAIESARAGEAGRGFAV
VADEVRKLAEKTVSATKEVNEVVHGIRRVARNSMDAVDEAAGKIGHSATA
AADSERYMTDLIDIISQASYMVQNMAAASEEQSATSDQINAAIAGIKDTA
EETTAGMTRSAEALARITGLIAELESILAALAKAETGKTVSTGDGQFLNW
TDDLSVNIGHLDSQHKNLVALINELAAAMKAGKAKSVMLDTLGRLKEYTL
THFKEEEDLFDRYDVPGARDHKKIHQSLREKVLSVEQDIVSGRITVSLEL
LEFLKEWILNHIQVVDKQYSAFLNSKGVR
>Dde_1700 putative CheA signal transduction histidine kinases, no good domain identification
MQEWRIFLPNSREDIRQAFFDDAQNHLAAMGVLLLELEVAGKDADHELLD
GLLRAAHALKCSAGFLDYRRAFTLARALESFLDMWREGTLVPDESTAARV
EKAFDILAVLLTPSGTSESEQAARSEKSAEAEALAAVLDAAGGVEENGGG
TQCPAQYRVYAPDGALVFEGHCPDLHLAGKTGSNLYVLEFIYEEDLNRKD
LSPQALLGFLQKSGYILAIGGRTVPVGYEPADVLCVLYASFLEKDLIAAV
FQIAAEKVHPVDLQDLLAGEAMWQAAVVKDAEDALLHAVREPHKDSVDEL
VRQYDNAMEKLRAASDEDKEPLEGWDIEAVVSLGNGGEVADPFCMAVELH
AADPAGAENTAYDATAASDCAVARGQTADADEAGLVAEFEDSFMEDEAEL
LLNELPEEHPLRAAYEAEPQGDEEFFRDTEEQPDLSYLNEALPDETPAGG
VVFDLAMPVAESDTGLQSASLQDAKHKGEAEMIAGFAVGPAQDGNAGVLQ
LAGDITIERSAQLQEAFQEALSRYEVLRIDSQQLESADLTLVQLLCAAAA
QAKERGGRLESEGLPSAGLMQTLVLAGFDDAAMKRRGLETFTGSGD
>Dde_0643 metal dependent phosphohydrolase
MGKLNVDDLKEGMVLAADVCGRDGRTLLGAGAALQERHLRIFKAWGVTEA
DIEGVDRSDMEQEHEAELPPEVLEAARARVDARMGRHGGSELEHELRRIT
TLRLSARILHDGMPETEELDYGALRACAAKDSFDKDRTSVHSVVDDQVQL
LSFPDIYFRIVKVLESPSSSSRKLAEVVSTDASLAARLLRLVNSPFYGFP
SKIDSIARAITLIGANELVTLALGISVMRVFSGVPSGGFNMRRFWEHSIL
CGLFSRLIAGHKMGLSEERLFVGGLLHDLGELLMLSRHPRTMCRTMVYAH
EQQVPLYQAEKAVFGFDHAGAGSLLLNRWNLPDGLVRMVGYHHLPDRVRA
PLEASVVHVADIMSFLFRIEDVPAGMVLSGLNGAAINKLGLAPSAVQTMM
AQAGRQFEAISGVFFDTGQEARDKA
>Dde_0161 response regulator receiver domain protein (CheY-like)
MTIRCIVVDDEPPARDEMVYLLSRFADVQVAGTADSAEQALALIAQQKPD
LVFLDIQMYGHNGFYVVEQLLDYPEPPLVVFATAYDQYAIRAFDENAVDY
LLKPIEEKRLAKSLDRVREALAARTEQEQDSRTQTAPPLHDDIRLGRLLE
QMGRRTVLTRVAVERGGRIVLLQPDEVFFIQAQGKRIWAHTTEGMAPCHG
VTNLQKLEEKLAGHDFFRATRGELINMQHVREFSPWMHGKYNIVMSDPGQ
TEITVNRSRVKDFKERLGLV
>Dde_2644 transcriptional regulator, Crp/Fnr family
MNHGVIIVGFVGKVPHGAENRMENSLFLGRIPLFSGLSAQQLESMASIAV
DRPVDKGQIIFVEGTRAEGLYIVLDGRVKIFKTAPDGREAVMHVFGAGEP
FGEVAVFQNDVFPANAMAVEQSRVLFLPRRGIVDRIAQDPSLAMNMLAAL
SRKLRMFTRQVEALTLKEIPQRLAAYLLHLSVKKGHKDVIRLDVSKSLLA
GVLGTARETLSRALAKLVETGAITMEGRTITITDREYLTALAEGHESL
>Dde_0370 multi-sensor hybrid histidine kinase
MKINLSISSIRLRVILVTLLVALVPVCTMTVAGLLVSMQQTASALSLQSR
TALDKVSAAISRTTREAENVSRLVAGFNTLQGNPEPDSLRDMLFSRQHFW
DKGFVEVFDAQGRILARSVPLRTANRQWMTPPEDPLVMQGILLHTASDIV
RTPAGLAARAVAPVYRPSSLQAIGAVVTTFPLDRSMLQHIKEQTQADITL
HYPDLRVESTLHDASKLPVTHDWDNTYDVMRNAEGPAQYEAQIAGSTYAL
SSIPLRNNAGVTQAVLSVALNRNMLRQYLHDAVQTLVLTLVLALVMAAGL
GMWTAEKLTRPLHEMVQAIRRMAGGNLSVRVTEGGSDELGELAQSFNKMA
GRLEEQRAHLLDALHEHEETTLRLANANKGLEYANRELLSAREEYRKIFE
GSVQGIYQTTLEGRFIKANRALARMLGYGSAEELIGTVTDIGSQLYVNPA
DRQRLKSLLSTRSSLSDFETRFYRRDGSQVPVSISVRLVYDENDLPQYLE
GALTDITERERRREAEQQREAAEAASKAKSEFLARMSHEVRTPLNAVVGM
ADLLWESDLTPDQRLYVDIFRKSGQTLLALLNDILDYSRLEAGRLTLERL
PFSLRDTLTMTVNMHAAQAESRQLSLSLHVDETLPDNYCGDSLRLRQILG
NLLSNSIKFTREGSVEVHVGPAPGQQELTAGEPVMVRICVRDTGIGIPEN
VQQTIFESFTQADSSITRQFGGTGLGLSICRMLTTMMGGRIWLESTQGQG
TAVYVEMRLDLHDRSAAETQPEECAMPVQAAPLRILCVEDSANNRLLFRM
YLKNTGHEVDEAENGEEGLRLFMLNSYDIIFMDLEMPVMDGYMATTAIRD
YEQRHRMPAVPVVALTAHALEDFKQRCLAMGFTDYLTKPFRKQQLLAMLE
RNTGAPAPQYQADGAKRPAPEEHTAGQNAEKLAEQTAEEQAARKQTSGKQ
PPAAAQHTTEHMTDRQADKSATTVTTDRQAEQTSGQPPAGAAGDTATTGQ
SGEGTAAADAAQEVTMLENQRTGHTVIPQTGRQQTDRQQTEGTSDNDDTE
PHREARKTQREPSQSPAHKT
>Dde_3206 PAS/PAC sensor signal transduction histidine kinase
MPPADGGPALHISGPAATLPRAFFCRLRSVLCCGAVICWCHGHRPGCRKG
RRIPVLPANPLFVETILTRMPVGLMILDGDGNIARTNPALSAMLGIAPHE
LQGRGWAEVFMAEGNNLEFNQVIVDVVHNELEFLSRSVPFVDPAGSRREL
GVLSCFIRQQDSVAGIVLLFQDMTELARMHDAERRIYREKLRLEREREEA
LRLLAQAVAHQVRNPATVIGGVAGMLIRQHSGEPALGRMLDVIREETLRL
EAMVAEVSSFAAISAGVLHHVDWHALLHGWAADRLAEADEADIVLHACTG
MGVVYPDLVRLLLDELYDNARRFAHTDRALKVTVSVSHEDGWTRLVMQDN
GRGMGRDSLPYVFDPFFTSRSDGVGMGLCKVKRCMMLHGGTAAAENVHGG
GARFIMRFPPRSASAENGDVPPPENGLR
>Dde_1723 response regulator receiver (CheY-like) modulated serine phosphatase
MPDSSSILIVDDSRSVRNALASLLRKSHAIEQAENGEQALASYARNRPDI
ILLDLNMPGMNGLEVLRTIREGFGDDETYILILTADDSSGTKTRGLSLGA
NDFLSKPFDIAELRARVGVAERQRKLTRQLVDYARRIQNEIDLVASLQSK
LLPTATPYLQGIHIESLYEPSGEASGDYYDFFPVQEGRKIRTVVADVSGH
GARAAFIMSIVRTVFRITQSRYMPLDETVALLENHLMDAIGDEEDFVTVF
TADVDFTDERLDYINAGHCPGILRQPSQEPQLLTGSMPLLGFLKAPVKMR
SIPFTKGSGLLLFTDGFYDWKKQDGTLFSLEDFIAAATGCLGRDEHVLKK
ITTTLEEAGGGMPAYRDDLTALWIFNETTAS
>Dde_0180 response regulator receiver domain protein (CheY-like)
MAEQVARTVLLVEDSPVQTRIIQNHIETLTPFRVVTASSLQETRDVLETR
RALAGANPEEGLFIAVVDLNLPDAPDGEAADACIAAGVPSVVLTASFDEG
VRARFFDRSVVDYFLKGSVRDMDPMVAALVRVFRNQWVRALVVDDSRTAR
HQMAHLLEVQRFQVLQAENGREALEIIEAGNNIGLVITDDNMPRMTGVEL
VSELRQRYRPDEMGLIGVSAAGSGPLTARFLKNGASDFLTKPFEVEEFYW
RVNQTMDKLDMMRELMAFRKGRA
>Dde_3233 multi-sensor hybrid histidine kinase
MTRTANHVFRHAPCQPATPRRAVCATAVFVLFLLVTVFWVSTACAQQDRR
RNVLFLNSYHNGYSWSDKILEGVKDVFAAQDRYNIVLQVEYMDSKKFHYE
DTVQTLFRLYRDKFRGKHFDVIISSDNISFNFLQQFRDTLFPGVPVIFSG
LNDFHREGLSLKGYSGVTEEYDVAANLELAMRLHPQMKRMVVIGDTSVTG
VAISNQIKKALPVVQDKLEVEFWYEYRLEDMLNKVRHQGPDTFFYFIPMY
RDIDGQFYSAQELLEKVHANSDAPLYSNWEFLLGHGIVGGKLISGVRHGM
VAARMAMQVLDGTPVDDIPIMSDPEAADSEAFIFDYNELRRLFITQEQLP
AGARLINEPSRFYELNKQVFWTIIISMVLLSVILVVLVMNILEKRRVEQK
IKDQLSFLRLLMDTIPLPIFTKDTTGSFLQCNKAFEDFFGVDRQSLLGLA
GNPDNLAVRALTDPVDVDMLRRPSVEIYDKTIEGPDGLPRNIILHKATHN
NARGEVVGLVGVVFDYTARRRAEDSLRAAEEKYRSIFEGSPLGIFRIRPR
DSFIDLNPALARMAGFENPDQLVQTLPQDIDRLLEQMAATSSSSGDVIDF
EHTFTRGDGTAITAHITLRVARDRNGDIVLLEGYAENVTQRKLAEQALSE
SQRMLQLVLDNIPQLVSWKDASLRYIGANRSFAQFFGIAELEDAIGRTDV
EILPDEAQALRLREEDEEVIRSNTPRYRYKWSTTAADGKSVWLETNRVPL
HDEQGHVVGLLTTAEDVTQKINLERQLLQSQKMEAIGTLAGGISHDFNNI
LTSIINSVELALSDVEAASITFNDLMRALKAAQRGSHLVKQILTFSRPSV
EGFVTTDINEALNEAVGLIKASLPRNIEIRLAVPPRPSFIHADPTQIHQV
IMNLCTNSFQALRETGGAMDINLEQEPVPEETAQELAISAGNYLKLTVSD
NGPGIPQVILDKIFDPFFTTKGKTEGTGLGLAVVHGIVKAHRGAVRVSSD
PFRRTAFEVWLPMLDAEGAPLPISDAGDLRGGDERILFVEDDDDQLHTIP
RVLESLGFTVRALKSPSHAAQLLRENPSAYDLVITDFDMPETNGLELADE
IGDIAPRVPVIMVSGRDVAAEGALAFPNIKAIVPKPYNRNILSETIRKVL
G
>Dde_0710 response regulator receiver domain protein (CheY-like)
MRILVIDDEAPTLKMFSLLLGAYGHEVFTADSGERGLAEFRRRQPPLVLT
DIRMPGMDGMEVLRLIKEQAPATEVIVITGHGDMELALRALNLDATDFIN
KPIRRESLDQALARAQERLSLREENGHPLTLSQARGAVVITLRGTLGTAS
EAALRKAFQEAAQPGSCVVLDFAASTSINGAAISVLADAIRSASGSGAPV
IISGLSESFRHVFDAMGVLAHARTFDCLPEALEHAAASAC
>Dde_1016 two component transcriptional regulator, Fis family
MARVLIIDDDDLFCEMVAAALELSGHEVRSAGTAADGQALCRSAGFDVIF
LDIRLPDGNGLELIPAFSACPSEPEIIIITAAGDPHGAEMAIGSGAWDYL
SKPSPLDELQLTLTRALRYRKRKAAFIRPAADRQGIVGSSPRMQACIDLM
AEFAPSDTPVLVTGETGTGKELFARALHRNSRRTAGPFVAVDCASIPKNL
IESELFGHEKGAFTGAVAERDGVFAQAHGGTLFLDEVGELPLSQQKAFLR
VLQERTFRRVGGKKELYSDFRLVAATNKDLPALAERGEFRADLLFRLQAV
LLHLPPLRDRGRDIYELALYHVEKLCLRYKLGHKELTREAAAFLEDYPWP
GNVRELVHVVEQAVVAARSDELVQPEHLPRNVRAVAMRHRMQRNGTGGAA
VVPAAVSMAVSAGGEAALPTWKAYRERVMAEMERQYLLRLLTESGGSITQ
AGRLSGLSRQRLYALLKRNGISRSWPAGNSPAEETQDSDV
>Dde_0695 response regulator receiver domain protein (CheY-like)
MNVLLVDDEVAFVEALARRLTRKNMTVHTVHNGPEALDFLRKNPSVDAVV
LDVVMPGPDGLKVQEIIRKEFPLVEVIMLSGNSTTAMAVQGMKQGAFDYL
SKPCSTEELIEKLHEAKRRRDTYCEELAALKAGDIVLRRGD
>Dde_0558 multi-sensor signal transduction histidine kinase
MPPRITLAPTPKQFVGRSISRDLTISLLVMLMVVVGGMASIQYISHSRTS
LEELDNKADEYITRLADILSVPIWNFDTRTIEQIGSVFTQYDLVNEVVIK
DPAGHTLFSVTKAPDPDATLIRQRDIFYDGEIIGNVRVVLTLREYKRSLR
RMLSTTALTIGGVALVIVLATGVLLRIYLRRPLDVLLSSIDKVSKGDFRH
DFSTIQQAELAAIARSFASMSAKVEAREKALQRMNSQLQEEVAERERAEQ
ALRNSEERYSLAVGGTNDGIWDWDLISNKVYFSPRWKEIIGFQDHEIPNE
IPEWTSRVHPDDLAKILKAHEMYLSRELPAFEVEYRLRHKDGSYRWILGR
GLALWSDADQPYRMAGAHTDITDRKESERELLATKNRLDNILNSMPSLIV
GVSDNGIILQWNRTAEEETSVSARDAIGTPFENTLPEFSFLMGKVLQSLN
SGETISLERKAITYSDRVRTFDIIIYPVTERGEHSAVIRIDDVTDRIRIE
EMMVQTEKMMSVGGLAAGMAHEINNPLGGILQGAQNIVRRISTEIKANHA
AADEVGCDLTAIRAYMEKRGITRFLDGIQESGNRAAKIVSNMLEFSRRSE
SRRQLADMHALMDKTVELAANDYDLKKKYDFRHIELVRDYAPDLPGIHCT
PTEIEQVLLNLLKNSAQAMAGRPKDSTEPPRITLRTRLQHDKVCIQVLDN
GPGMDEETRKRVFEPFFTTKSVGEGTGLGLSVSYFIITTNHGGSFTVDSE
PGKGACFTILLPR
>Dde_0505 PAS/PAC sensor signal transduction histidine kinase
MTANTHQPPLAELHPVRPVRLGIATVGTGSSLELLAGLFSRTDFRQAFPQ
VCITALLLDDDTQPPAGLAHIPRYAQLAPLLEAQPLTTVLADMTEDGRHM
ACLRREAPPRMAVLDACTVTAFFSIITSEQLCRTCHVHLSHARTLFAALI
DQIDEDILLLDAEGRITDLNKKVLERRGGAKEDWLGRYCCDLEGQDFCST
CQGACPFEETLRTGAKAEQIHTRVTPEGKVSYHRVYTYPVHDEHGTLTRV
IEMRRDITGRTNMERKLHQSEKMAAIGELATYIAHEIRNPLFAIGGFANA
LLRSPSLDDNAREKARIILEESRRLDTILRSTMNFAKPSDPRRGDVDMNH
IVRDTMWLMRLNDEKRSITTGVDLTEPLPLARGDADMTKQCLINLVKNAQ
EAMPRGGSLTVRTGMKQRGIFIQVEDTGTGIPEEIRENVFSPFFSTKDKG
AGLGLAMTKKLIEEMGGAVELQTAEGKGTSVTLFLQPLLTVDDAPAAL
>Dde_2974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)-like
MLLCRSTQIPEDDMSYHSGLPQQPYGVKLFAEKIPAAHALRPSRTRDAVP
AHAHTGGADGLHMLAGAVPQHEGAEKIRHAAADRPLMLSCVAAGFPSPAD
DYIDRRLDLNEYLVRNPESTFYVRVHGESMRDAGIWAGDILVVDRAVQPA
TGRVVIAVLDGELTVKRLKKEGDRLLLVPENPDYSPVDVSGREDFSVWGV
VTCVLHRV
>Dde_1286 periplasmic sensor hybrid histidine kinase
MRYSLRFYSHCAFIISLFVLLTVPASGGASGIASVPLDELESRMWVKPFM
EVLPDAGGSLTITQVASPRMRQQFRHFDDVSPLGGARAVWLRFTLLDDGN
RNAAALPPFRADKAQPLPDSVRFALSSVERDGQNSTAEEPQETPEPRQAL
LQGPVLQLGPTIPAPVELYIPSADSAEGWQRIMTTGTAVPLPAPGGAPLT
VYLRIAGAPGPWFQPTLHPAGDSLDDAVRAAKPMHLLQGALLALILLHIA
MAATAKSVWRLWAAAATAAVLLHSLSPVAAATLFSWRSVAALFLPGIAVL
VLAQTGRSLLRTDESQRADRLFALCMAAGAIAALLPLIPGFSGLHRALPL
WPLLCVLPALPALLRWQDGVSGAGRYMLACLLPATGTVAGMGAALSPDAP
YWASLGPALGTAGGLLCLAIAPDSKRCVPAAAPEQNDTAEQHAFEQQEPH
LTAGALLARVSHDLRTPLTAMLSTIEELTASLPAHTGRKQLALLQSAGRN
LQLQINDLLDAARAAKGRTDLKAVRFNLHHVLEEAHDIALIKAGRKGLQL
SWFMSPHLPVNFLGDPDRILQIVLNLLGNAIRFTDEGTIRLSVERVDDST
DPGHLRFTISDTGVGIPLENPYAVFDSFCVSPGTGSGRYGGMGLGLSITR
DLVSMMGGVVCLESAPASGTTVSFTLRLQPASKLPHGMPSCLGRQPGLVL
VADDIASNRQLLSFFLEDTPLVLIEARSGAEALRVFRRRLPSLVMVDARM
PEMSGPETVRALREAETELGLMPGPVFGVVKAGDEQGAEAMRQAGCSAIL
LRPFTRGTLLSAVSETIAAMENPAQEPATAPECTVPAGGHTAAHSAQTMQ
QADITGGQQAHHETAEEPAETEPLLSAVNPMFFHNEERKLQNGAATVVQP
ETCSGPEEDGCATEHAASAAENTETDSVAAQQTAAAMPPEQSAAPVDTPS
LEHFETSRSVKTTEVDTAAQKSHELAGTAEDDPADEESPLPDDDGDAMPP
VNIPSVLTPETFARISAAVAALAEPEPAAPAGLAREEKPYPDTDSAERAG
VFSVMKPQAEQAAEQHDTAGIRQYAADAEPPAELPAQLQGLSDSISAGRR
AMLHNDLPRTGAAAAAIEHIAAQLGLQALRRIARCVCDAAAANDADAVQD
LFAELESATVRNRKAMEDLFRMQTVLRQNGKQGTGQP
>Dde_2387 two component transcriptional regulator, winged helix family
MAKDRLLVVEDDGDILQLLTFTLESAGFEVFSAMDGKTGLELAMREKPDL
VVLDLMLPGMSGLDVCKDLKRMPETQETPVIMLTARGEEVDRIVGLELGA
DDYVVKPFSPRELVLRIKAVLKRGAPFTEQEERTRWRVNGLSLDTEAHRV
EIDGDEVTLTATEFKLLFELVRNRGRVRTRDQLLNTVWGYEFEGYARTVD
THVRRLRQKIGDYAGYIETIRGVGYRFRE
>Dde_3096 putative PAS/PAC sensor protein
MNTQQRRLKRGTFREQPLAQREEAEFRSLFENAAAGLFRKSRSGGFLLVN
TALARMFGYPTPDAFLAESKEAGHSLFADPQAFAAMVHKLLTHGVVNNAE
LRIIPRAPEGARPAAAAEWIAVTARAVYTSKGSIRHFEGTVTDITRCKTA
RMRAAQLQEQLEQARSLECAGVLARALAEDIGGLLEPIVQQTQSALNTLP
AHSPAHTALDQALTASTEARGQLYRMLEFCRELEPPQVPVSFTAVVKECL
RTLRGKNQDEKDGEAVPVKITADLDAREDVVKGNARLLRRAVCALVKYAA
DSCSGRTGPAMTLRLRTIDMETAAAAAHPPHTCTLPAGRHICLTFSGSGA
HALPQGCTACPPWSTHGKPSLAMVQGIVKLHNGILCQGPDEGGVATLCLY
LPALGVADSARTAAGPAPRLGSERILVVDTDHSERNQWRALLGPLGYRME
TRPGPVEGLRLFMESPESFDLVITAYAMPQLNGLEFARTLTGIRPDIPVA
LCLSAHDTVTPDSACAAGACRLARKPLDGAARTRLVELMLSRNTDKTAGQ
RSWPRFSS
>Dde_0186 extracellular solute-binding protein, family 3
MLRKFTIMAAVLALSLAFAGTAFAGKTLINGIDANYPPFAYVDKDGKPAG
FDVDAMEWIAAKMGFTVKHKPMEWSTIVQSLVSKKIDMVCSGMSITEERA
RQVSFSDPYWTVAQVFIAKKGSGLTVEQVFTGGKKLGVQSGTSEADWLDK
EKPNKPEWNYTVRFYDSAPLAIEDVINGRIDAAAMDIAPAQDAQRVKPIE
VVGSFTDPEYFGIAVRKEDKELLETINKGLALLKADPYWEELKAKYLGEK
H
>Dde_1400 putative signal transduction protein
MRCILNMYDRCVKWGGYSMTGLSDVQRRWLDHRFRAMDMGHPAAAALRAA
VAGHLERGAPVVHGGWHEPEPSEIHGVPRLCNLVPEPCDSGPPPDIRQVV
STACIPPLPSVFHTLQSQLEDPAASPDDIAWTISMDPRLTASLLRLVNSP
LFGLRVKVDTVSRAVAILGAKHISTLAAGTLLLGLFHERPPRAIDIDEFW
RHSVACGLAARTLAICAGHTMPERHFVGGLLHDIGWLALCCGRPDLACAA
LRHSGRTGCALHEAEQHCFGFDHAGVAYALAQQWELPATIASAMRWHHQP
PADAKGQPVFDAAVVHVADVIVHAMGYSVAADQFAPALEPYFWNAAEVPV
ESLDVVVRTVYAELELMVDLLQP
>Dde_3246 methyl-accepting chemotaxis sensory transducer
MLRKYSIGTRVIALVALLVLCIVGIISASLKMQDSVVAYNIKETEAVMLR
GERTKLKVATDSIATTIGDILSDSASKEEQLEFIRTAVENVRFEDDKSGY
FFVYEGTTVVALPIKKSVIGQDLSSVTDSDGVRYVHELSKAAGSGGGFVR
YVFDKPGQGLQPKLAYARPISGTPYWIGTGVYIDNIDAERERLETATGDM
VSSAVYTLTGSIAAALILLVLPVCALIIVSIVRPIRSATEAAHQIAQGNL
DITLDDSGKDEVARLQSSLNSMVRELVATIETVKQKEAEANRQAEAAHQA
TEQTKEAMARAEAATRDGMNAAAQRLEGVVAAITAATGDLDTRSNEISHG
TDMQMARINETATAMEEMNATVMEVARNAAEAAEQTDLSRIKAQEGAEAV
SATINAMNDLKALADGLKENMHRLGDQSQSIGHVMSVINDIADQTNLLAL
NAAIEAARAGDAGRGFAVVADEVRKLAEKTMNATKEVGDSIVAIQQLAKT
NVDGMTEASQAIDKAVARSASSGEMLSEIVRLAQDAAGQVQSIATAAEEQ
SAASEEIARSVEEVNTLAQDNGRMIAESVQDIGQLAEQAVTLRSLVDELK
K
>Dde_1801 diguanylate cyclase (GGDEF domain)
MAALDLDDFKAVNDVYGHPCGDEVLVHVAHHLASGKRAYDVAARTGGEEF
ALILPGASAVTARLMVERLLAALRAAPVRCAGTGPLHITFSAGVAVCKGS
IPCSAEKLMAFADEALYEAKRAGKNRVMISRKSPGAPYDRSTMVQSQEKQ
ILFSGKE
>Dde_3048 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MSVTGNSVLFAREYELIAEAEAALARMAPEAPAHDALAGLLAGFCKTLRQ
CGRLMSMGDRMQAQLSELNRDIAAKEARYRSIFQCAAEGVFRTGADGSFA
EVNPAMANIFGWSSVDAFMQHNTSLASLFSSPQAHCEYLDRLCSAGAVSR
YEAVLRRRDGTPVWVEISTQALETAPETACGATHVGVVLDVTAHRRMLEE
LSHMARTDPLTGLNNRRFFMEAARAEVERMQSSGRPLSLLMLDIDHFKRV
NDTWGHDAGDMVLKQLSCCLAETMRGQDVCARLGGEEFAVLLPETGHAEA
CRAAETLRQAVAGMAFAGHGFSVTSSLGLTTLDSAGHAVSGQRPVPGGVA
VSACCGQVVEILLKRADIALYAAKKNGRNRTEVYPARCTAICAGALCI
>Dde_3196 putative transcriptional regulator, Fis family
MTAPLTIPCETIMQSIADGVFTVDLQWNITFFNSAAESITGIRAQEAVGR
KCWEVLRSSLCDGQCALDACMHRNVNVSGKSIFIVRSDGTRVPISISAAP
LRDPQGELIGGVETFRDLSEVTLLRKEMQSQYGIEDIVGKSPALSRIFAI
LPPVARSGSSVLLTGESGTGKELFARALHNHSERAQQPFIAVNCAALPPA
LLESELFGYKKGAFTDARKDKPGRLALAHGGTLFLDEIGDMPLPLQAKLL
RVLQEKKFDPLGGIAPEEADVRIIAATNSNMEQLVEQGGFRRDLYFRLNV
VRMELPALRERRSDIPLLAAHFVQRFNTLQNKQVQGLSEDVLATLMRHEF
SGNVRELENIIEYAFILCSSGFIQMEHLPDYLQHSTAASGGIGPDSAAHP
APRTPGTTSSLPPAASAPDSVNGAHRHAAFPPSVPQEALTPQNAADRTMT
MRDIKKQAVLQALARHGGRRMAACRDLDISKDTLRRILNQPDKA
>Dde_2792 protein tyrosine phosphatase
MAKADLKQLGGDEFQVESAGFKPTEINPMLVKVMQEEGMDLASNLTQAAF
EIFKKGRTFTYVITVCDKSVDDNCPIFQGMMYRLHLHFAAPAKVDATKEE
KLTEFRIIRDQIKAIAQEFIDWVRAGDKKKLGDLWDTKDIRKGELH
>Dde_1063 hypothetical protein
MKITSSAFSAYAQAARSGEISRAGSDVVHSRKAVGLRLGKLGIRLETEET
LDHASVAREAGDRLNRLRGFNFAESLQAQDAELYEALRTAPPSRAAEQPA
LESAFAAPNYTRNVGVRTYRRVSGFPQAHSSMINVRA
>Dde_3003 two component transcriptional regulator, Fis family
MNARVLIVDDEDGIRFSLRGILEDEGYEVAEAETGEEGLKLATETPPDLI
FLDIWLPGMDGLEVLDNLRTADASLPVIMISGHGNIETAVNAIKKGAYDF
IEKPLSLEKVVISANKALEYYRLRRENQALRSRLTQSTTVEMTGNSASIV
ELRGQIGRVAPTDAWVLITGENGTGKEIAARSIHASSRRKDKPLVAVNCA
AIPEELIESELFGHEKGAFTGAETAKTGKFEMAHQGTLFLDEIADMSLKT
QAKILRILQEQSFERVGGHKTVKVDVRVIAATNKSLEDEIAAGRFREDLY
YRLRVIPLVVPPLRQRGDDVMLLIGEFMNRMTAEHGFRPVTFAPDACSAL
LCYHWPGNVRELKNFVERMLIMHSGQTVTAAMLPPEYRCAGAGIMPQPCT
AGPSDGMIPEGVMDFKAARTAFEARFLEAKLQEFGGNITRLAEAIGLERS
YLYRKLKSYNIQTPE
>Dde_0659 putative transcriptional regulator, Fis family
MTGTSSCSDLVAEVVATISEGLMLVSPQGKIEMVNPALERLTGYSAAELT
GQPCTVLGCGACDEARRGASGWCRLFERGTESSRRCDIVRKDGVRVPVSK
NARVVRKDGRVAGAVETFTDMSEVVERDRRIEALARMLDRADGFAGMVGV
SPAMQRVYRIVERAADSDAPVLILGPSGCGKELAARAVHDLGHRANGPYV
PLNCSALNESLLESELFGHARGSFSGAVRDRQGRFEAAHGGDLFLDEVGD
LPLATQVKLLRVLETKHIERVGENRSRAVDVRIICATHRDLGSLVRTGQF
REDLLFRINVIPVVLPALRQRAEDIPLLAAHFVAGIRQRTGKDIEGFTPD
AMHRLTAYDWPGNVRELRSAVEYAFVLADRGRLGVEHLPAHITGTRAECC
PQTLHVASFAGEDLAAQQAEQRNQEHDELLRALRRTGGNMAAAARLLGVH
RGTVRNRMLKYGMNLRKEIRDGTTEG
>Dde_2968 methyl-accepting chemotaxis sensory transducer
MKMNLRARFLVPTLTILVIGMGASAWLTQTYSKQAVTAAVNAHMTQVSES
VAGLIGTWVQDAKRDLTLQAQRDEITQAFAGGDMNEVTREMQQFKKNYPD
FDAVKLADADGNIIASTYPQEVGRLDISSRKYFRGAMNGTPVVSDALKSQ
LTGNLIFVVSVPCMRDGRVAGVFLGTLELGSFSEHFVAPVTIGKEGYAFI
MASDGNVLAHPDSSRLMTNLLKQNWAGEMLKNDSGKLNHEENGRWKELVY
SREPETGWVVGVTAFEDDIYSAAYELANIVRLISVIVALLVAGVLFLIVR
NIAGAMSETAGYAEAVAEGQLDHSLHVQRQDEIGVLADALRKMVQNLKSM
IQTAEAKTIEAEEQSRKANVAMQEAEEARKAADNAKREGMLQAAAQLEHV
VLSLSSASEQLAAQVEEASRGSDVQRERTSETAAAIEEMNATVLEVARNA
SEAAGSADNARNNAEEGQGIVEAVIQSITEVKNRATSLKESLNTLGDHAE
GIGKIMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEK
TMQATSEVGAAVSAIQQGTRENIEGMDKAGEAVLKSTELAGRAGKSLGSI
HSVVESTADQVRSIATASEQQSAASEQIARGAEEINRIAAETSEVMTQSS
EAVSNVARMAQELQNVVEQLKRQ
>Dde_1279 methyl-accepting chemotaxis sensory transducer
MSLKQLFALSTVLIMLLSAAVVGVFVKYRSAVELQHSAMRERDAAVALSR
EMASDSNGLTDNIRLYGMTGEVKYKEAYMRILDQSNGKIPRSDGSVIDFM
DKVKAFGVTRQEMDALKAAKELSNGLAVIETEVMDFIDARLQRAGSAERY
RSQLDADAMQQMARLYDAEYYQWINKIAAAVQQFNTSLFSRTEKSVNDAL
ATGESMSRTFFVMLGVFIVFVFALLVFLWRSLSQSIGGEPRVIEQVAAAI
AAGDLTAADKLDRTTARGVAAAMLGINDSLNLLVTEMVSSLEHIKRGNLR
AECDEKKVRGAYRELLASTNKLMATIVAYFDLIATPLMCIDSGYDILFMN
KKGAEMAGKTPQQVRGTKCHDHFRTAACRTGSCICDLAMKAHDVTSGETV
ANPAGKELLVSFSAAPILDENGAVIGAFEQIFDETAIKSGQRKMQQLAGN
ATNIADRLASAAEELSSQVEQSSTGSDVQRERMGETATAMEEMNATVLEV
AQNASHAADNAEGSRTRAHEGSTVVGLLIESIRQAERAARGLKEHMTELG
QQAEGIGGIMNVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRK
LAEKTMVATSEVSSVVNSIQNGTRASIASTDDAVNAIASSTEHATNSQGK
LAEIVNLAETTADQVRAIATSAEEQSAVADEITRSADEVNQIALDVSQAM
QQSTQAVRELAELATELQTLISELTAAR
>Dde_0533 histidine kinase
MYPDKNDVICFDVCDTGPGIPHSKRHLLFESFVQLDGSLSRQHQGSGLGL
AISRGLALLMGGTLQLAEAGQTGSLFRLALPLPAAQEAAASGITPALPAA
EAPVTTKKPAAAAAAGAHILLVEDNTLNQEFISLFLQEGGYTVTAADNGT
GALENLEKRSFDAVLMDVQMPGMNGLETTKRIRNSGRAWARIPVIALTAN
NMAGDREYYLASGMNGYVEKPVNKAQLFGEIERCLTEAHADTAP
>Dde_0694 response regulator receiver domain protein (CheY-like)
MQEPHMTANDSPHVLLVDDEPAFGDVLARRLRRRNIRVTHALDGDTALRM
LLNNEFSAVLLDLKMSGISGLEILNVLSRMVPDVPVIMISGHADQETVAH
CLANGACQYLPKPCDADEIVSIITRMQKN
>Dde_0098 universal stress protein family
MEIKRILLPVDGSKSSLTAAGEAASLANIFTADVLLVHCNEVFPNLKQHL
DYAREVAKLSNEILGPARDILQDHNIRYVERVVDGSPAEEIAELARREKC
DLIVMSSRGRTVLEGLLLGSVTQRVLKLAPCRVLVIPAGS
>Dde_0263 metal dependent phosphohydrolase
MRHPPHAASPLCHHSFTHTAHGPLTTCYNHVRPPRRGHHSGGNMADSCSG
YTEKHALPAGILRAWPVISAPVRQRLQLPLAGAIYFVAVLCGLQSGIACG
LPPSIHPAAGFGFAMLTLRGGTMLPVLMLADFCAGMTALPPLPALALAAG
NTAGIALAWQLMQAKAPQVRIFDLPRHAVLFICAAPLVQSVTAATAGTFS
LTLAGIVHHSQASTVWGAWTLAQGAGFILSGMAALAWTRPAPPDAATPDR
RRLLKASGAALLLCLLVLGPHPLPDSLRYLLLFIIIPATAWAGFKLPPAH
LSSLLLAGGTLGAWLTHADHGVLSTLPAPLPFVLLQGAMLLLSAMALMTQ
VLATTNRHMRRSLSTTQDAALFSLASLAETRDNETGAHIMRTQAYVRVLA
RQLRTHVRFRSVLTPEGIEQLCKSAPLHDIGKVGVPDAILRKQGPLTPQE
MDQIKLHTVYGRDALRHASMRLGGSSFLQMAEELVHTHHECWDGTGYPQQ
LTGEQIPVAGRLMALADVYDALISRRCYKKPVPHHQAREIILKGRGTRFD
PAVVDAFLRAEHDFLAIAAAFRDEPDTCT
>Dde_2107 response regulator receiver domain protein (CheY-like)
MAPTIMTVDDSASVRQMVSFTLRNEGYEVIEASDGKDALAKIRPDVKMVI
TDLNMPNMDGIELIRNIRAKSGFKFIPIIMLTTESQAAKKQDGKAAGATG
WIVKPFKPEQLLAVVKKVLR
>Dde_2040 CheW protein
MNETQRKQDDELLQLVTFSIGEEEFGVEILKVQEIIRTMEITKVPRAPEF
VEGVINLRGKVIPIIDLRRRFGLDSKKHDKHTRIIVIEINNMIVGFIVDS
VSEVLRIPAGTVEPPPPVVAGMESDYISGVGKLQDRLLILLDLDRLLSHE
DMSALGTL
>Dde_3100 response regulator receiver (CheY-like) modulated CheW protein
MAQTKILLESGTNELEVIEFYLDEPEYRGSYGVNVAKVLEILRQQPVTSM
PGQRHASVMGAFRHRDGKVVPLVNLGRYLDKDLVENEPPKVIVTEFNGVI
TAFQVSAVNRIHRISWEDVEPPSDMLQNFSQNAFTGVVRLEGRVVFLLDL
ESIVADLNPDLAVRQSARVDVRQGDRTYELLHADDSGSIRKMVKKLLEEG
GRFVLRQASNGEEAWEMLLALKEEAQNSGVPVSSLVQAVITDVEMPRMDG
LNLCKRIKDDPVLRALPVALFSSLITEQLKHRGDAVGADAQFAKPELSEL
GRKLLELLEGDS
>Dde_3598 periplasmic sensor signal transduction histidine kinase
MPALYSTGERPLRFARFLSWVSLVLILVTSTAFSFVVANNARKTLLMKQK
EYAMLLGENLNSHIYKRFVKPTRLAFGRVELIKPFQYRGLDQVIQTTIHG
LQVDYLRIFDHSGTVSYSSRLEEVGMKDLADRTVTRAFEKGEHSFSILSR
MSLLRAMFSFDMEPETFILRTTFVLKTMEDRLDEDEQEIIGVMEFAQDIT
NDYKAAVNFLWLVVGASLASSLTLFVLLVTIIRRAERALNERLLEKERLE
RDLHQSEKLASMGRMVASIAHEIRNPLGIISSSAELLLRRTGDADPLTGR
ILQAIFDEAKRLGQTVNDFLDYARPRRPGRDPVDIAAVLRQATGFMEGEF
ARSQVALHADLQEGLLVAGDKDLLYRAFYNLMANSLQAMQGGTVQDATLT
LCTRMTRDGQVEVRIADNGPGFPRQGREKLLDPFYTTRDEGTGLGLAIVN
NIITSHEGSMELTDAPEGGAEVRVTLPAA
>Dde_1166 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MQHGTGKRIAFICAAVLLIAITASLGAALFLRLAGIPESGALFALLPPLA
GGCAATLCGIAAWLQMRAAWTKQLREHARTAAQLSSLEENHHQLRRRLAE
AERERAHLRKQADSALSDIASRRGEAKFQATFHATPDPIMVVNLHTGLVL
DVNESLQRLLARDWGQLLGESLDSLLEWGNGARNRFELMLEREGSVSNLP
AVMHDGGGTPHHVLISARHVQLEGFSCAIAIARDISDHHRLQEQLAEKTS
LLENVLAHIPYHVFWKDRNSRYLGANELYARNLFNASVNDILGLTDTDLG
MSAVLGGAILREEQEVLDTGRPVINAERTIPLHDGRTVIGLVSKVPLLDA
NGQPQGVLGISADITNLRAYERQLHALLDGLPDMAWIKDAGSVYLAVNQA
FADFLHRDPLDVPGRTDEDLWPGELAANQRQSDADAMTRLADLRYDQWLA
GAGGVSIWADIIKRPIMEKDASGNTVAVGTVGIARDISQRRAQESRIRML
SEALEQSSVAVVVTDPAGNTVHLNPRYEEITGFTLHELQGRPLPLLADPE
SSAPVWEALHKGERWRQEIKSPRKDGDDRWLSVSVAPVVDNDGHPANIVL
VLEDITEQKRSEEHIRHLAMHDGLTGLPNRRLFMDRLRRSVAMSKRNGVR
FAVLFIDLNDFKEINDTLGHEAGDHVLRTVAERLRQSLREVDTCARIGGD
EFIVLLHDIRSNEDLAHASERVSAAISTPINLNGTVRVVSGSIGIAVCPD
DATDVDQIISHADHAMYRCKRNRRYDSASR
>Dde_1015 histidine kinase
MTELLHHRQPRRCNAGPLYAVTDSDGVFVVVSAGFASLMHGAGGMPDAAL
TGRPAAAFLARLTPAPQMPLTAAWNGKVWLDFYGLLHVEIVPFTACACKE
GRAAWHLIQLLPDAAEACMDCAGRTARGLAHDFNNALASVMGFAELAAGQ
AGHGGSSELLHRSLANVLKGCGRAGAVLEKARAVAGRIPLNLTRHSACAL
LQQWTDTRRAALPDSVQLCTGTLQALPAITADARWLEKAFAAVWDNALMA
MRGTGGTLRVECRAGQGYDGRAYVFMDVTDTGCGMDMQTCREAVEPFFSG
WENTAGQTSAGGQGWGLSLAWGVLRAHGGGLEISAQPLAGCRVSFRLPAA
CEG
>Dde_1029 hypothetical protein
MRILILAKDTEEAAPYRAVLQTLRVEAHEVHDSQAALEALREKPFNGVLI
DMPTLLRMAGKGRNELQNILSLYPCLHARPDKQTGIIILGQEGDPHENVR
RFIETRCKNFSPRTIRRDARLDVHFNILMSTSALFTPQTTVKTCTMNISV
LGCFVFSVAVWQPDTQVWIQFVDLEDKTPVVAKVCQVQRWGKGCKIPGVG
LEFLSLTDNQIAGLQNSFAQQAEDPAPHGQ
>Dde_3737 GAF
MRYTCSVVFRKTFVLVVAGRGGAPLQYAAAALSPSRGRQGFFRSRSGSGQ
PPTRQVSVMSSQRLYKTIYTLAKSINSSLEPSRILADIAEQVTKAIGAKG
CFIRLLDAQGDMLLPGASYGLSQRYALKGPVQVEKSHLDQEVLRGNSVHI
EDVRSDKRFQYRDEAAAEGLVSLMVMPLKARGEKVMGVLRVYSGEARTFT
EDELDFLACIANLSGIALENARMYEALKRENRLAEEYIYRVDEN
>Dde_0503 membrane protein, HPP family
MTQPEKKSAPAGYLCKMRGCATNDWRPCMHEACWSAAGAFAGILLLGLLN
SFLSRADSVLLIGSFGASAVLAYGAPDAPLSQPRNLVGGHLLSAATGVAC
FQLLGNDAFAAAAAVSLAIFFMHLTGTLHPSGGATALIAVIGSPAVHALG
YMYVIIPAGAGAAIILGVALVVNNLSRRRSYPRWWW
>Dde_2832 multi-sensor signal transduction histidine kinase
MKTTQLPSLSRTMSVKLIRWMCVLGMLCALFLAAFSYQSRISEFEARSRY
NAGIIANYINEYMQGAYAALQNTMDEPDGTLPHTMTMLKRLYPQFTRVML
VDGNRKITTSVPPALPGQELAVPLLPVAVAGGVISQPQGMTDAGDMGVYL
GVKQQDGSMLVAELHLRAVQKHLAELFPKESSLLVLTDAWGNTMVHPDWA
MVRRFANIGLQPVFHATRDTGSFFGKTESEGRLLQVSAMRIASTGWVILH
IMPTMNVITGTARDILAFVAVFAALYTVLAASLLYELQRGLARPLREFTR
TIKDISVGAWPGRSGSPETYDEFQEMRLEFDNMSAALEEREADLTRAHLF
VQNIIDAMPSVVVALDTQGHVTHMNRRAAERMQHNAPAGKTLLPIEAIAP
QISPFLPQLHHALHTRTPLELHLTGKDADGSTVHEEVQLAPLPGESEGGV
LRIDDVTQRIQLEEMMIQTEKMMSVGGLAAGMAHEINNPLGAILQGTQNI
RRRITDTLPANIAAAQKAGCSMQAVQAYMHERKIPDFLQGIQESGQRAAN
IVSNMLTFSRRSDASPTTANLHAALDRTVQLASSDYDLKKKYDFRQVHIV
REFADDVGDIICHPIELEQVVLNLLRNAAQSVATQGAALKETGAEEYRPT
IHLRTRREDDWAVIEIEDNGTGMSAATRRRIFEPFFTTKQAGQGTGLGLS
VSYFIITKNHGGTLTVDSQEGEGTTFTIRIPVNGPAAVRTQDSFT
>Dde_0746 histidine kinase
MTSRVEATRAMEAVRKTLEERVKERTAALGRVNDRLEREIAERKLHEELI
VQHRNHLEALMNALADSALLMDTGGRIITLNITAAQRLGLPERGSGGQVF
FDLLQGTTDTLVWRDALHEVLETFLPARFEVQAFGLELDVTYYPVFGYAD
WVTGVAVYMMDVTEQKQISRRLRRLSAQVLSAQEEERKRIGRELHDSMAQ
TLSGIKFMLEGERSRLEQSGTGWPTERISKTIEYVQHAIVETRRIVMDLR
PTVLDDLGLIAALRWLQQEMSQIHSLTITSHLSLPENALSDVQKSVLFRV
AQEALNNVIRHSGSDSARISLEQVGEECVMTVTDNGSGFDRLDNTRNGIG
LDSMRERLELICGRLDIVTEKGIGTVVRAVVPLDSPC
>Dde_0977 two component transcriptional regulator, LuxR family
MGEGYSLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQ
PELVLMDISMPRMDGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAG
ADGYVLKDASNDEFILAVESVLGGKIYLSPGVSDAVVKGYLNDARGQSVS
SSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKTVEKHRSNLMQKLGV
HSAAELRALALERGIILRMRSDG
>Dde_2950 PAS/PAC sensor signal transduction histidine kinase
MRVFSALMRRSCAFFLMLALCLCLQTAGHAHGQTLEFRCDDSLPPYEFLA
YGRAQGFTVDLVQAIARDSGLHVQIIPGPWHVIKAELDAGNTDALTGMYY
TRERARQVLFSEPYTVVSHSIFVRKGSRAMTAEDLKGAVVAVQRNDIMHE
YAQKHLTGSTLLPCTTRLEALQAVSDGRAEAALLGRLMALQLMYEHNITN
VTVSGEALLTTPLCFGFAPDRKDIMVIFNEGLAHLRMTGEFDVIYEKWFG
RLERRAAEEVVRRYAAWVLTPLFFIMAAGLCWLVILKKRLARRTLQLQVQ
VEKLQETEKALAESERQYRSIFETIRDGFYRADMQGRVVLCNPAAADMLG
YSMEELAGKNIAQDLYRHPYERRKLLSHLEREEAAANVQVEMLHKNGSIV
LIETNSRLVRDETTGEPVAVEGVIRDVTARNRLEALIARTEKMISLGGLA
SGMAHEINNPLGAILQGVQNISRRLDSRLAANIQAAADSGISTEGLEDYI
RRRNIRKLLHSVRSAGEQAAGIVRSMLSFSQTGTPVLMPSDINALTERVI
TLVRSECRLSEQLCFSDIALHVELASGLPPVPCSPAEIEQVLLHLLRNAA
QALAHGKTTAPRITIRTALDARHIRIEVEDNGPGVDEDTARRIFDPFFTT
REVGQGTGLGLSVAYFIVTQNHNGSIYHEPAESGGVRFVIRLPLFPGAPS
GQDARPSSAL
>Dde_0458 methyl-accepting chemotaxis sensory transducer
MKGTISLKTKMIAFCLAIGLLPFIGMGYYAFTSASDKLEEQYFGQLTSLR
AIKQHAAQEIIRSWNNEILQLARSTAAADFLSRFIMYAETPDANTASGLD
VTSAAYTRLHKRAVPHFENYVLEKGYYDLFLVDGKGRILFTQARESDLGQ
SLTQGPLAGSSIAQAWQTAQQSDIGFADFRPYAPSNGEPAAFIARKIENR
SGIEGTVILQIPLDRINALMQLRDGMGQTGETYLVGQDKLMRSDSFLEPE
FHSVAGSFRNPQKGKVDTEASRSALEGRSGTRIITDYNGNPVLSSFAPLE
VLSGVKWGIIAEIDEAEAFAGVTALRNALFIAGAGILLLVTATTLFILRR
ELISPLSIIEHYASDVAGGNLDAQVSGSFSPEIASMQHSIATMVGSLKEK
MAEANAKSKEASLQADNAQQALEQAREQQARVAKLVEHMQELSGRANNIA
ERMSSAADELTAQVDQVSNGASIQRDRMQETATAMEQINATVNEVAQNST
LAATSSSEARDRAQDGAGIVQQAIEAIDQVNTTALSLKDSMRSLGEQADS
IGQVMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKT
MSATKEVGDRISSIQQAAGKNIESMDKAVTAIQQATGKANDSGAALDSIV
TVADGTALQVSSIATAAEEQAAAMEQINRSVEEVTMIVSETTEGMMQAAE
AVQELATQANELRSLIQSLEEAGKTA
>Dde_3417 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MNETPQISARHCGQINQNAHFGSWHLDLGSQLLTCSDEACRVLGLDVGAP
IAFERFLQCIHPEDRPLFDRAWDAAMCGKSLDLRYRIVSGGQVRWIHLRA
TFKGDASGRPRAADGTVEDITDLKRVEQALNSMRRQREELASHVPGMLYQ
YRLRPDGSSHFPYASARIQEIYGVAPEDVVEDATPAFAALHPEDRDRVHE
TIQASGQSLALWHDEYRVQFPDGRVIWVEGEASPEAMPDGSILWHGYIHD
VTSRRRSAEELRLAAKVFEHAGEGILITDAQGHIVNVNRAFSVITGYARE
EVMAQTPRLLESDRYDDEFYQTVWQALREHDYWHGELWCRRKNGSQFAAL
LTISAVPDMRGNIEHYAAMFSDITALKENQQQLERVAHYDLLTGLPNRLL
LGDRLKQAIRQTRRRGMHLAVVFIDLDGFKEVNDQHGHAVGDKLLSVLSR
RMTQVLREDDTLARLGGDEFVAVLLDLPDISVSVPILDRLIEVAAQPVPI
GDALCEVSASIGVSYYPQGEDIDADQLLRQADQAMYRAKQAGKNRYHVFD
TEKDRTLRTRHEELDSIEKALANGQFLLYFQPEVNMRTGEVLGAEALIRW
QHPTRGLLSPASFIPIIENHPLGIDVGEWTIEAALTQIEVWRKAGLHVPI
SVNIGARHLLQPDFIMHLRGMLSRHPGAQPQDLELEILETSAVEDFVQVS
QLMALCGRMGLRFALDDFGSGYSSLTYLKRLPAHLLKIDQDFIRDMLEDP
DDIAILDALLALARSFGRNCIAEGVESIQHGEMLLRMGCEWGQGYAIGHP
MPAHEFEQWLHTWQVPLSWKGFKPDSRSALPVPFTYVDHRVWISQMIDYL
SGKTQVPPQPEALQYWRDQSGRPTFFGKDPDDQVDVLHQSIQQLAHTLSE
MKNAGRVEALRAGIDKLQHLQADLLGLLPPDQNPD
>Dde_3718 multi-sensor signal transduction histidine kinase
MPEKAPDGTIWYRIAPEEFRCVNVLHRRGFCGSAVRMFRANAVCVRRAAC
YCCAGHMQGNTMHKKTSPRRFGLVYRIVLTTGVTLLTGLVALSWFNMRYH
QRHAMREFAEGADRLGSTILLGTRYAMMTNARHELDQIIRDLARQPDIHS
IRIYNKAGAIMFSSQADEVGRVTNIRDEACNVCHHTEPPLTRLALSESTR
RFTGADGEPLLGSLRPIMNEEGCSGGPCHVHSADKQVLGALDVVMRLGPA
QLDFARFQQGMVGATAVVFLLSASAIVLLLRRFITQPVSRLKENTRRIGR
GEPVLITDAGQHDEIGELAGAVQSMADDIRQKQEELLRQRREYQALFEQV
PCSITVQDREYRLLQFNREFAERFHPLPGAFCYQAYKGRTDPCPNCPVER
TFATGRSHCSEEYRTNPDGSRTHWLVHTSPVVDENGQVTAAMEMSIDVSA
LKKAEDRLRRSEQKYHAIFNNIPNAVFVLDAQTLDIVDCNHTVETLYGYE
RSQLTGMSFLDMFPEEERRRYASQLKAFTVLPRARNHRKDGSMLYVDIML
SPAEYHERTVLLVAASDVTERLETEQKLIQAGKMATLGEMATGVAHELNQ
PLTVIKTASSFIMRKIHRGEPVAPDVLETMAREIDSHVDRASGIINHMRD
FGRQSDITLEPVNLNAVLQSSCEFFARQLSLRQIEVDWQLAEVLPPVMAM
PNRLEQVFTNMLLNARDAIEERSERDPNAPRRITVRTTVEDREVVVRVCD
TGKGIPRSLLNKIFEPFFTTKSVGKGTGLGLSISYGLVKDFGGSIQAANM
PEGGACFILRFPSTSSLPAGSESAAT
>Dde_3308 diguanylate cyclase (GGDEF domain)
MQLKTRLISALAAILITVFLATSIINYVVTRNAVRDDLLRSALPLTGKNI
YSEIHSALMRPLLVSSAMANDTFLRDWVTGGEQNEDAVRRYLSRIKKEYG
FLSTFFVSAVTDRYYTPDGILKKIGPRDPHDVWFYAFTRYKEPYDLDIDV
NQAAGNTMTVFVNFRLEDDRGRLLGVTGAGIALDKALELLDEAQRTYLRQ
AFLIDQDGLIQIHPDTSLVEKAYITEMDGLRDIAPDILAGQGDAVSLQYD
AGGRHYLLTSRYIPEFKWHLLVVQDEMTALRTARGNFMRTLAMGFVSTLV
ILALCVLAVNKYQARIEHLARTDPLTGAANRRELEERFDLAAYRASRDGI
PFSILIIDLDGFKEVNDRLGHLAGDEVLASMARVIRGRLRPTDLLARWGG
DEFIILLDGNEESARALARRISAAVCAAPDIPVGFSSGVAAYRDSDDLTS
LTRRADNAMYQAKARGGDCVMAAEDL
>Dde_3077 metal dependent phosphohydrolase
MTQAQTASLHSAEEFMPVPCAMLRTDMLGQFGLYIRQGGNHVLYTKAGER
FTERHRRILSANGVEQVYIRTRRKPEYKEHVARYLGDVLADESIPLPARA
RIFYETSTEIVQEVFATRLPPTLARDSFDRILQFVTEGIGFLTLENSMGT
IASLIAHDYSTYTHSIHVFVYSQAILQTYGFDEESLIQFGLGAMLHDIGK
TAVQDCILTKPGPLTEAERRSVNLHPLTGVGLCTRMPLSQDALHCILFHH
EKLDGSGYPCGLTDPQIPLPVRAITIADIYDALTSHRPYAEARNPFAVLR
LMREEMHSQIDMDVFKRFVVILSGASVI
>Dde_2584 conserved hypothetical protein
MKKTILSAFLFLMLVAAFPLHAAQNVTVYGDDAYPPYSYQKGKEARGIYV
DILKKAFAQMPDYNVTIELVPWKRAVKLVETGKGFGFFPPYYRPDLRPWV
IHSEPILEEAVVVFCRDDVLASPRPDWPADYKGLTVGTNEGFSLGRKEAE
QGIITLEEAGDNDKNVIKVANKRIDCYLNDRLAVLQTIQSLKQAGKYVEG
QHAGILEGAVVEQEYGHVGFATAGSFPFRDDFVAKFNETIKQMKASGEIE
AIVAGYK
>Dde_2727 universal stress protein family
MEIRKILVPVDGSACSEKAAEYAANLAQLVGASVLVVNCRMALPPMLGRD
SWEQARSALVKRSEVLLESYCDRMKDEGVEAACRVLEGAVDKAIAETAEA
ENCDLIVMGSRGHSELEGLLLGSVTHRVLQLADCPVTVIR
>Dde_1521 response regulator receiver domain protein (CheY-like)
MSYESVTVLVVDDEEMVRENLEAYLEDEGFKVATAGSGEEALELLASVSP
HVGIIDMRLPGMSGNDFIIKAHAVNPALRYLIHTGSTNYKLPVEVMNVGV
THEDIYIKPLQNMDMLVRGIDRLLAK
>Dde_3076 metal dependent phosphohydrolase
MQSTASHTKAPGKSHPVVTEDQYFSVSPLMLLADNAALFSVYLRQGNNFV
LYTHAGEMFTHRHKQRLAENGVTEVWLKESQRHAYTAHVEQHLGNVLADD
SLPAEARAGALYGIASDALQDVFAQHGAGALPADTARRARQLVEHIISFL
KVPNGITALGRFIAHDYHSWTHSLNTTFYTLGILQSYGLPDESMAHIGLG
AMLHDIGKAEIPSSILLKPGPLTASERQCINTHPLMGVARLAQTELPQTT
LNCILFHHEKLDGSGYPSGIGGTAIPLAVRAVTVADIYDALASERPYAAA
RPPFAVLQLMRGEMADELDMDVFKNFVLMLSNAGLTKT
>Dde_3291 transcriptional regulator, MerR family
MKQQTKYSIGDVSQICNISKKALRYYDKIGLITSQRQDYNNYRYYTHESL
LAVPVIKYYKQMGFKLDEMREFIEGSTANVYRAIRNSFLSKIQELEKEQE
EIRRKHMSVKDWYDLILEAEMVIDNNIQEVSIKYIEPSRYLFLNQTYDTN
IKAAIINIDFTNYVESLNNEITGPVILNFSSHAARMKDKEQPVRILQKTL
MPCHDEYTTDMGGHMMAACYHIGPHEDIAETYKKIRRWARQHGYTLGDES
YERYVTDYWTTRNSAKFVTEIMIKASRQTVVVPEQEDEL
>Dde_3712 universal stress protein family
MFKKILFATSASPACDNAAKVAFDLARRNGAKLYVFHVMGVPSRGFSHMV
RDLRSGEEEHADGDYRDWVVEELQSTYAEQMEGFEKNTSIELAVGVPHTE
VLRFARQNDVDLIVMGANTREDDPGAARTRSIIGNTMQRVARVARCPVLI
VNRPCTTCWNLFSNIVFCTDFSKAADSAFKFALSAAREVNARLYLFHAFD
INASRLGVFPGQAELERTLEKAHAQMQERYLSHMGDFDNYQVDIWEGTPY
VEILKYARERKADLVVMAHHTKEVNPDQAEIGSTVEQVVLRSACPVASVV
HPDKVAA
>Dde_1942 metal dependent phosphohydrolase
MMKRTNRILIVDDNHVNILILKQILEQEHQVFAAVNGYEALELASGPMKP
DIILLDVLMPEMDGYEVCRRLKENDETRDIPVLFVTTQGEEEDEAAGLAL
GAVDYIVKPVRPSIVLARVRNHLQLKTHQDQLEDLVRDRTRELQLTQDVT
IFSLACLAEMRDNELGGHFKRTQNYVRLLASAAKAKGAYKEYWRQISVSM
LHKSAPLHDVGKVGVPDNILLKPGKLTEEEFAIMKLHTVYGRDSLERAES
LLQYKSFLSVAKEIAYSHHERWDGRGYPEGLAGDAIPVSGRIMAVADVYD
ALISKRVYKDPLPHSTAVQIVLEGSGNHFDPVLCELFERHQEEIRAIAIA
DADLEEEREALRR
>Dde_2822 response regulator receiver domain protein (CheY-like)
MPRLTSLILHPDAAVRHSLRAHVSQVPFLRVVGEAVCANEAQELLNAIHY
GAVFCGVDLQQPEQGLEFAQRLMGRRHRPALVFIASDETHAFAGFELDAT
DYLIWPCTAQRFSRTIARLRQFCSHFKLAPDPETRWNEKAAPAPAGTAGH
GLQADTTAEDDATVQVPLADDEQDGFLDALKQAWDYNSTYRPVEIEKLAI
TYEGKTLLLPYDEIVFVEAYEDYTYVHTAEQKYLTSYRLKILEGKLKPHR
FFRVHRKYLVNLNMVTEIASLPGSSFMLRTAGRTRIELPISRRRIGELKQ
VLGL
>Dde_2826 PAS/PAC sensor signal transduction histidine kinase
MDNNGYLTHCGRPDTERERPGVLLDTSPVGAFLVSCDGALLECNRTFASQ
AGLGARQAAGHTLRSLLGDADWPVHAAALKRCAEHAEPVRYEVLLPQGWR
AFALYPVAAALGRVACVAGYALDLSGPSGRRPSGFAPDSALHPEECAGSG
QDDGQPPEPAHELAAAPAGVLSGGAVRRADAAGQPVHAVQNSGGAAVGYI
SPSGRLLQLSAALCTMLGGSHDQLRGSDFALSFNENDRPAVRERLRAGVG
SGVEGVAFEARLNALQDEDKWCRVHCLGVCAAEDKPLFGIVVAEDVSHIR
RLRAEAVRAGQLASLGELAAGVAHEINNPVNGIINYAQLLLDAAESRKAQ
AEAGIARKIIKEGSRIADIAHNLLFFARDRRQEMALLRPEAVLLESLDLT
RAMISRDGITLQIAVEPDLPMVRGRSRELQQVFLNVISNARYALNRRFAT
PCPEKHLAISLRSRRGGEGMVVAEFVDQGGGIPGHLRARVLEPFFSTKPE
REGTGLGLSISQSIIRAHGGLLELYSDGHTYTRVQISLPTPTGAQ
>Dde_0321 response regulator receiver domain protein (CheY-like)
MSELKVLLVDDEIEFAGTLAERLRLRGLQADVTTDGEEALRLVTAHRPDV
MVVDVMMPGMNGLDVLRQVRTNMPDLPVILLTGKGSTRDGIEGMRLGAFD
YLVKPISIDDLIGKIHEAVNGA
>Dde_2675 hypothetical protein
MHTAVTRQVPAALHHLLPALLDEARRLLRAVTDAMSAGAFQDGADAAHSL
KGAAMQYGWVDMAQAAYGLEQALIVRDRQECMRHAAVAGALLDTACEALE
AR
>Dde_1653 phoH family protein
MTDTTVCKTLEFDDPQLANVLFGPQNSNLNLLAERSGAGISTRGSMLCVT
SPETGTADTMVNLLTQLYGVLKAGHPLYPRDVLYAWTMLQREPSTELIRI
FKEAVFVVSPRKTITAKTLSQRDYIAALRENDMIFAVGPAGTGKTYLAVA
MALSSLLSKKVKRIILTRPAVEAGEKLGFLPGDLVEKVNPYLRPLYDALH
DMLDFEKVSEMLEKGIIEIAPLAFMRGRTLNDAFIILDEAQNTTPEQMKM
FLTRMGFGSQAVITGDITQIDLPGSGGRQLSRSGLVHAERILGNVKGIRF
LHFHEDDVIRHPLVGRIVQAYDRFENEHSEKA
>Dde_2929 histidine kinase
MPRGMACPCIHEEQRLLKNKASGLSGEFRPASCPVAYVWCRTLLSDFKQK
AETHMASRQEMTESGAIAACGEGADSRSLEAEILRLRQREKELLHERQML
KDILKAIPDMLTVHDRDGNVMFSNCKPNEDCWQHHGGTKHGLRCYQCHFH
GDRNCEDCYIPDVFDSGEQRVVEMYNPDMKSFRSITVFPVRDGQGDVTMV
AEYVRDVTATRNLERELRVAKEAAEAADRAKSEFLASMSHEIRTPMNGVL
GMLDLAMTTSLDEEQREYLEAVQNSAEALLSLINDILDFSKIEAGMVELD
QQVFRLSKRLSSLHTMFVHRAAERNLEFAINISPDVPDGLSGDPLRLRQI
VVNLLDNAFKFTDQGQVVLSVEVLERGAENVLLQFSVQDTGPGILERHQE
RIFDSFAQADASFTRRHQGSGLGLAICKRLTGLMGGDIKVRSTPGEGSTF
VFSARFGVAVLDEEPVRVRSRTAEPAPVRGRILVAEDHPMNLMFIEKFLK
KQGYESVSVTDGSEVVPALTRSRFDLVLMDIAMPAMDGMEATRAVRAATG
MKTPSDVPIIAMTAHAMKGDREQFLEAGMDDYIGKPINSDNLRSMIIRHL
QARRKS
>Dde_1198 Protein-glutamate O-methyltransferase
MSLFSSSKLGSGTRTGGGATAAPAGVTGGLASGITSGRLPTRQLGLRKTA
KITDEEFEKLADFIYNKTGISISIKRKYLLENRLGARLSELGLKTFKEYY
DYLQLDKNRAAEMEVICEKVTTNETSFYRDARQLGIFQNEMLKETLAKQE
ALGRKELFIWSAGCSSGEEPYTLAIMLHEALGMSIIGWNIRITANDLSPA
MLRLARAGVYTDYALRTTPKGIIAKYFDKVDAGYQVKPRVQKLVQFGPVN
LSDPASTRRVPRSHIVFCRNVIIYFDDAMKKKAITAFYDNLLPGGHLFLG
HSESIHKLSTAFRPVPKPGAICYKKEE
>Dde_3150 carbon storage regulator
MLILTRRPGESLYLGDTIKITVLSVQGKQIKIGLDVPGDMTVYREEVYMR
VRDQNRQALETSDADLLAATQLWHAKKK
>Dde_0602 multi-sensor signal transduction histidine kinase
MSPLTRMRFRNKLNVGITLIVLAVSVVLAVVSIHISTSELLAESRRRGLV
LASNLALRVTDPMLSVDLLRLKTMVDELSTVDEDVSYAFVLDKANRVLVH
SFEDGFPVELRTANLLPHGATRRIRLVDTGTERIYDFAVAVRIGQERLGT
VRMGLSRTKAQKVVQRLVSIISTLTVVSLLLAVLVSTHFARRITHRLGML
REYAEQIVRGNMDVTVGAHDAPYCWQLTQCGCDDCPAYGDTLRRCWHVAN
TRCMENGLAHDMAASCADCPVHGRLAGDELQDLAETFDVMALSLRQHMAE
LCAAEQDLSRQQKLLRTIIESTPDLVSLVGRDGTYLAVNRAFGHWVGHPA
EDLPGRKDRDIFPPELAIQREQEHVRILATGVTVSREARLKAAVDGKEGW
FHVVKVPVTDENGRVTGILSTARDISEIRSYQDQLIHSQKMESVGSLAGG
VAHEINTPLGIILGYAQLLQEDVPEGSQTHEDLKIIERQAKFCRKVVADL
LGFSRHSQSEKKEMCFNNSIMEVVQLVRHAFSLENVRIVTMLDDRLPIIY
GDPGKLKQVWMNLLSNAVQANEGGGLVVVRTRLDIDNLTVSALFADTGTG
ISKDNMASVFDPFFSTKPVGKGTGLGLSVSFGIIRDHEGEITVHSPLPPD
VIPDEVRGDEPAGPGALFSVTLPLEPPDWPLPDDSASDDTAPDDSERHTG
RSDGAGAAQRG
>Dde_0788 TPR repeat
MMRCSTVYQGRRAFKVRLSSQSAAGNVYMLPMNPHTPFHEETRIRLTRRD
LIRYENLLRDSLSRVISFKSYSLFFPRTPVAPEAVWEPQDRKLLIPLILK
GELLGIFVARGVGGRPARTLLAAYPAVATLCLENLLLYKMSITDPSTGLA
SLPYMLDVAAREVGLIRECFRPGADSRCDVATLGHRACMGLVVLRFSSMP
AVVRDCGYLFAEQLCALLADELQAVVPEQAFAARTGDSEMAVFLPTATPR
VCRKVAAEAVRKLRAVSLLHELRDEEIGVSVAAGFANYPQDMNGAQFERP
EAEQARMLLRKARTAASVAVEDAPGTMQQVMGFGRILAEGGRVQEVLPMN
RVVISLGAAMDAREGQRFSIWSHVRHASGISGGAGVSGAQDEKPAAPSVD
PAVPPLPSGARQEHTLMYKGELVIMEVRENSSLAEVMHLGDPAWSIAQGD
RLTLLPEDKDVSAAGAVSDDGAAASADPLTGLLRHRDFLARWTRDRDLCS
GYTLALMRLTGESRQHGDRSPHAEQLMAQAAEACRARLAELQPAGGDAVS
FGGRYGLNSLIHFHPDVPVDKVYDCYTELCEHLERKLHIEAAVGIARHPY
LNFRKPDSLENCQKALEYAMLMEKPRVGVIDTWALNISADKLFSQGDTFA
AIEEYKLALLADENNTMAWNSLGVCMAGLGRHSEARRLFGEALQRDRRDV
MTLYNLGHVCQNMGEYDEARQYYRKCLKYDKEHVFALLRLGQMAEQEKKF
GPARQYYNRAARLDGAQALTWRNLARLCMRQGRPDEAREHLHQALIHNPQ
DAISLQLLARLYLEGGDDPEVASVLARQAVALRPELKAGWLDLARALEAT
GRQREAAEALSRAAGL
>Dde_1078 CheW protein
MNETNQYLSFRLGSDAYALGVDTVREILDDKRITPVPRVPEFLRGVINVR
GMAVPVVDLRLKLGMSRTVLDTNTCVIIAEVRAADEVLSLGVLADSVQEV
LELDQQAMTPPPSIGTAVDSRYIAGMARVEDVYVTVLDVNSLFTLEELSA
AGGMKEAAPE
>Dde_0241 extracellular solute-binding protein, family 3
MKRPVGLFVSSISAVLIIFLCAPVSADDRQEIAPLLFATQEFPPYAYTEH
GRPAGTVVKAVLAACAEAGFPCSVAVYPWGRAQSKVRNGQADGLFPVVRT
RSRDRWLRFSVPVSTVEYGFFVHENDPVQLVSAADMAGYRVSVYGPSNTS
QTLEALNRNRMFTIDRQPASLTGFLKLEKGRVDAVFSNKAVGETLISLHN
LRGLRYAGTAATTYYYVGFSRKTIRDPVLKRFNEALRSLPAHYGLPVPDP
LRQDGDDAQPASAGAEEQAGNAAGE
>Dde_3602 conserved hypothetical protein
MYAAAGHDAGQRSRIYAGLAAAVVLALCLGLSVRAAAGPVVVWSYYDSPP
FVTGESTGLAYDFVEMLNAAAGGRYVFTLKVVPRKRVDCALEQGGSGLVL
FVNPAWMNRPERYRWSSPLMHDRNGVLSGAALRLDYSGVESVRGLILGGV
YGRRYQQLDEAVERGVLRREDAPSVYQNVQKLAGGRVDFIIAPESVLRCL
VRELGLSDRVYFSPRPHAAYTRHIMLAAPEAGLEEFIEQFIAGLPRNPRW
KELHGLYLDRCGMRPAVP
>Dde_2050 diguanylate cyclase (GGDEF domain)
MKISPLKDVAGSVHAVCDGRLHCDFSADGRMCEALDNAGVPRDAKWRTLV
LYMRGMQEYSYLTDEQKMQVQQLLVDLLQNKDFSDRNYERILERDRQILV
APYEQRLNRAMQETMALAGEFRSILLRRKGDVEHLESRSIQAVTEGREPE
EVVALLKDTFREVLLEMERDAAAMTELTQRDPLSGLHNRRAFDAFLSGAV
QSWRREGTPLSLIMLDIDNFKNFNDEYGHRIGDQAIQTVARILQEAVRGH
AAEHEKDFLVARYGGEEFSVVLRGALASLAEKIAESARSSMENFNFVIRN
NSGEVVRSGISITLSAGVAFASSLWRGAYEDNLIDSADRALYEAKRGGRN
LVFRYRDDQDGNSRYELVDS
>Dde_3047 serine phosphatase
MSKTTRFLDALAEVSVQTKMKIILFLGLVMFPLVVLVLNDSLERRGLNNF
IAVWTAGSLLLFLPLTRGALHLLVLRSVHYLNGLCEQMKAGNLRPFATLP
PEPKEGDELQRLRHNMFWMGHVIHSRQHELAVTMEHLKETQNQLVSSIEY
ASLIQRSFLPARSELAHLFGDHFLLWSQRDTVGGDSYWYKQTPQGFFAAV
IDCTGHGVPGAFMTLIVHSLFERLDISAVDGNPAALVGAMNNSIKNALEQ
HDRKAASDEGMDCSVCFVPAKRGVVRFAGAGSSLFVTRADGTVQEVRGDR
SGAGYVRTARDAVFTNHDIPLETGMRWYMASDGFADQIGGEKNLPFGKKR
FMALLSRTAVLDCAAQQRALEEAFAGYRGHQPRRDDVTVLGFTVQSA
>Dde_0322 hypothetical protein
MTHEQDKAAYMGRITAALTHEMRNVLATMRESGGLLEDVLMMHKEDFPRR
EIFEKSLGRIGTQAKRGMDICAALSRLAHSPDTPVATLNAAEWLDYFVFI
CSRFARLKEISLAHGMTPAGISFSTDPVQFQMVLFHVMDALFGVLPAASS
VTLTGEAAGSGLTVRFNVSGGPLPQPDSSPELALAQSLLAGAGGFLRSDS
SVGQIETFFAS
>Dde_3002 putative PAS/PAC sensor protein
MTPRSILLVEDEPVVAFDVAHRLQLLGYPAPSTVPSGEEALRAAAALRPD
IVLMDIMLEGEMDGIETAALLHDRFDVPVIYLTGLMEPSLLERAKITGPF
GYVVKPFDDRELHICIEMALYKHAAERERTEREQLFAATLRSIREAVMII
DRQGVITFCNPAAQELLHLSAAQLEQRMFASVASLMVEGDATASDPRRLV
LRHAGTGRRSLNAILQHASGHCPVEISATVTGDSPDRAGTVLVLRDMTTR
RRDKASLTKALDELQRVFEQTVMALAVTSEKRDPYTAGHQQRVARLACAI
AARTGMDVHRCQGIRMAGLLHDIGKIYVPSEILTKPATLSAIEQNIMRTH
PRVGFDILKGVDFPWPVAQTVLQHHERLDGSGYPLGLCKDDILPESRVLA
VADVVEAMFSHRPYRPSLGLTHALDEIRTGAGTLYCADAVRACLELFDEG
FAFDTPAEHPADNDGDLTP
>Dde_1686 Hpt domain protein
MSCIDYPRLRNKFGNEDTVRKILTIFMSDFDERLLRMSTMYSRDSRTELY
RSAHALKGVAGTIYATGLQHCAASLEQAAMTQGAAESLLQKAWENLETEA
RCLRHEVSLFLS
>Dde_1071 multi-sensor signal transduction histidine kinase
MPGHACRLRTVCVRAVCAVWLIALYAAGAVAAPAVAAAAVGGAPARALLI
SSYHPGFPTFFDQIAGLRSQLDAAGVLLDVEFMDSKRFAPEKVSPLFKDM
LKRKLAVLPPYDIVFCADDNALQFMLEHGRELFPLTPCIFMGINNVGLAV
SLRQDELFTGVVESVSVTQTLALVRQLFPQMTGVAVLVDGTPSGQGDLKT
VLAAERDFPELSFSVISLQDMSWDAFGAALEKVPPTSVALLLSAYVDAAG
ERRTFESSLDFIAAHLRVPLLHLWEHGIGEGVLGGRVVSHHEQGRLAGML
GLRVMRGESAAVVPVVRGDAANRYIFDFRQLEKFGVRLSRLPEGSEIRYR
SSTVWERNRWGIIIAVLVVLLQALVILMLHTSRRRLRDSEEELRLWGVVF
RHAGWGIALGVGDDDRLTLVNPRYAEMHGYTVEEMQGMSVLELYPQREWA
ALKSQRARALADGRAEQESVHLRKDGSSFPAWVDISVVRGSSGGVTYRVV
NVQDISERVRTQELLVETEKMMSVGGLAAGMAHEINNPLGIVLQSVQNMQ
RRLDPSLEANAREAAACGVNLENVQTYMERRSIMRSLEHIREAGLRAAEI
VRNMLDFTRRNDAGRSTCDIAVLLEKVLMLGSSDYDLSKKYDFRNIRIVK
DIEADLPAVPCVRTEIEQVFFNIIRNGAEAMSEHPVAGRVPTLVICARRS
GRWLLVAIRDNGPGMSGEVRRRVFEPFFTTKPAGRGTGLGLSVSYFIITR
NHGGRIEVHSTPYEGSVFLVALPVPGQPAGADDAPDFPLMDELSRRALLG
AG
>Dde_3113 PAS/PAC sensor signal transduction histidine kinase
MPLPLSAPQTTRTVQCPPCAPDNAMHPRAVLPALFLLAAAVFFLCWAPPR
NASAQPPPGTGRTHFLLVHSYHPNMLWVQDINSGVQEVLGPAIDASNGTM
RLSVEFMDTKRHPDAAYRADILALLRDKYAQDPPDVIITADNIALNTLLD
EHEAIAPGSRVVFCGYNNYTPDALRGHDDVTGIAEKVSIRETIQAAAAML
PQTSRFIVISDRSETGRAMTHELALQTAGIPEHGRMELWDAYTFADLGRQ
LAALQGTETIVLLSALQDTAGNVQSYRHSLRHILAATDRPVFAVFGFYAD
KGIVGGKLTDGVMQGREAARMALRIAQGTPPSRIPVITENINRFVFNHEL
LARYGISSDSIPAESTVLNRPPSFFTRYRQVLLPAGVLVALLVLALALES
HHLVRQRAVEQSLREAKTRYRELVDNARSVIMHIDRNGQIEFINEYGLSF
FGYEEHELTGKSVAATILPQNADGTPYSELLRRILENPETYACHENENIR
KNGERVWISWLNRPLRDASGNVTGLLSAGQDATERKKAQDALAERERSYS
VLLSNLPGMAFRRQTGGDGTFLFASEGCLPLTGFAPDDFVQHGRNLRGLA
HPEDLPRITGAIDASPHRYAVEYRIIRSDGETRWVWEGGMMISGSGTSPC
RSSGDSICVIEGFMTDITARMTARTELERLNEELEERVAARTAELQTSLE
HLRQAQHQLVETEKMAALGGLVAGVAHEINTPIGIGVTSTSYLQEKMQQL
EELYRSGGMKRSDIENFLRVGNESLTATRMNLSRAADLVRSFKQVAVDQS
DEDTRRFNVLDYLEEVLVSLRPRYKRTSHRVELSGDKDLVITSYPGVFMQ
IVTNILTNALLHAFDGMENGVLSIHAVRQGNDLTLTLADNGKGMTPEILS
RVFEPFFSTRRGNGGTGLGMHIVYNLVTRRLKGTVQCRSTPGDGTTFTIT
VPMQDSPSAVQT
>Dde_2820 protein tyrosine phosphatase
MPMKKTILFLCTGNSCRSQMAEGWTRKLKGDEFEVRSAGVETHGLNPLAV
EVMAEAGVDISGHRSKLVSELDVDTFDYVVTVCDHASEHCPFFPAESRRI
HAGFPDPPALARTAATHEEALEHYRRVRDAIRDFVQSLPAPLL
>Dde_0328 response regulator receiver domain protein (CheY-like)
MSVIAVHYGIYCHEDQYLSAIREATGYSFVTDDTVVEEASRRSGISASRL
RKAFDAKPSIFNSFTNDRERARAWFRMIVAEYLVKENVMFGGFTAMMVPA
AVKHALKVCLIANRDARLAAAATLGISESDAQKTMRAGDSDAAEWVNTLT
GNTDPWAAGLYDIVIPVDKSTPLEAAALVKEMLGREAVQPDARSRKTAQD
ALLAAQVEVQLATKGHFVAVAADAGTVTLTVNGHVSDLERLGTTLRAAVI
DMPGVDDVRVVGGRDIHTPSIYRQCNFELPNRVLVVDDERDFAQTLSQRL
EVREMGSAVAYDGESALEIVERDQPEVMILDLKMPGVDGKEVLRRVKETR
PEVEVIILTGQGSEADREECMKLGAFAYLEKPVDIEQLSSVLLKANTKAR
QNLKSA
>Dde_0850 two component transcriptional regulator, Fis family
MPKLLIVDDNEDVRRQLRWGLSREPYDLLLAADGQEALKLFREHRPGAVT
LDLGLPPDPEGTDEGFRCLDAMLRHDPNAQIVVVTGHHDKENALRAIRAG
AFDFCRKPVDLAELKVIINRAFYLSELKAADQPLQEDLPPEPEVPHFNGL
VGDCEAMRRVYATIEKVAGADAPVLVTGESGTGKELVARAVHRLSSRRSG
AMVAVNCGAIPETLIESELFGHEKGAFTGATSRVQGKVEYADGGTLFLDE
IGELPASMQVKFLRFLQEMVMQRVGGRKDIPVNCRIIAATNVDIEQAMRE
GAFREDLYFRIGVVTINLPPLRERGADVLLLARHFLSSIGVQQKTKVQGF
SAAAEKAMLHYPWPGNVRELENKVRRAVILTSGQRIGPEDLGIEPEPVQP
APEGAVPSAGRKTLKEARNEVERDMVEQALRTFSGNIVQAAKSIGVSRPT
FYDLLKKHGLDG
>Dde_1573 Protein-glutamate O-methyltransferase
MSSLFSKSITLRKEQKITDEEFSQLRDFIYDQCGIYIADNRKYLIENRLA
NRLKELNLKTYGEYFYYLRYDAGRKQELSRLFEVVTTNETSFFRNPPQLK
VFEEKVLSAVLADLRASRSKRLRIWSAGCSTGEEPYTLAIILHEILRSEI
ASWDIKITANDLSEAVLHAARRGIYTEYALRTTPPEIISKYFIKEGSNFK
IKPELKKLVNFGQINLSDRMQLKRVERSQIVFCRNVIIYFDDEMKKQVIS
SFYDNLTPGGYLLIGHSESLHNITRAFKPEHHQGAIVYRKLE
>Dde_0721 serine phosphatase
MNIRWKFFFVLLGASVVPLLVVSILVAVLADNIERNVIRETRAELTERAS
TAMLNMARNYATGMMQDIQSLSVIAYTLKREAERLAAVPAPAAAAAADDT
AVLFSSDFDPELPFPPDLKEFASYTGKPRGMMMQTASGLVSFGSMSFHVP
GGNPDARQKQRAARLAGLLPVLRDVRGVFGDYIYRMFVGLEDGLSGTYPG
LGEIPPAYDPRERPWYRAAVERDDITWTSPVVDAVTGRLTLTISIPLRGA
DGRLLGVAGLDILMQEGLQAHSVISSWSKDLEMMLVYRDPAEGENAPIHV
VGRTLRDAEGRQMWRMMQREAPFPMPEGRTLDNLRSRMSHRHADVMELEF
NDEPSLLAYAPITDQLTVVIITPRSVIQEVPDTISNMLTESDEAVNLVVS
MSLILVMLGAFVISLLASRATTRPLLDIVQAARRLSQGDWSVHIPARLGD
ERDEVIQAFNEMGPKLSKQIQIQQALDVAHEVQSSLLPAEAPAFEGWDIS
GRTRYCDETGGDYYDYITWMDGQEPALSVVLGDVSGHGLPSALLMATGRS
LLRGQADSLCCTARRVERVNAILSADVNGTGRFITLFVLDIRQRSRQVRW
VRAGHDPAMVYDPATDVFSLLQGCGLPLGVVPDATYNAEETTLPENAVVL
IGTDGIWEAVNAEGEMFGKDRLQELLRSHAHLCAHEISKAVLDAVDTFCQ
DAPRMDDVTLVVLKPQQHGCTQSAPAVPQGDTPPEEASVHVRLTSALDIP
ALAEAVQTLCDSTACSRRVRFSFTLAVDELVTNVFEHGAADGVQRRVDAW
FWLQDGFLRARLEDNGNPFNCTKAAPPELNVPLEKRKKPVGGLGIHLVKQ
YMDDFRYTRKKDNNIIVLGKRLDNGSKHDDERSHA
>Dde_1804 hypothetical protein
MSDDSMQNEEHDASSRRAEQHKHEELVEAATEEIQTLRRALQEGLCRSDA
CNAGRMLAVTRLLPGCDEEQWAAAAERLGLTNWIAYPLGSDAGINLLKVQ
DALDDLSWKSEHDPLTGLPNRRAFERMLNRVLKNSHPCSWT
>Dde_1285 response regulator receiver domain protein (CheY-like)
MTRRSPRYSGRRILVVEDNRVSRTMLELMLTKAGYETECVADGDAALAGM
SGRHFDLLLLDIELPDITGDRLLPRLRACRPEEASVPAVAVTAHHDSDIR
RQLTAAGFTAVFSKPLDMPQLIDAIEKLL
>Dde_1360 multi-sensor hybrid histidine kinase
MDNAMENEVELLKKQIVELQRENEILKSGNVFTGSSREHDLLLRLFDSVK
EYVYVADMETYELLYVNRTLEKDIGPCTGKKCYQFLQGLEEPCPFCTNDI
IRNDPDSSHIWELYNPVLKRWYRCIDRAIPWVGNRLVRYELALDISDIRT
AEEEMRRFRMALEASSDAVYLTDLRTGLFVDVNSRAYTQLGYTREEILGM
RPEDINIAVSEHGLEPYLRNVLDGRDEGAVETYHRHKDGTLLPVEVGLRR
LTTVSSELLVSVARDISERRDAQRDLATRLMYERVLSTCARELLSQFSSL
NAMHTTLESLRETVDVCRVYIFENFINDDGQLCCRHRFEVCSEGVASQFG
KSELECVPYLPAFSRWAQTLEQGKALSGLVDEFPEEEQPLLRAQDIQSIL
VLPLKVGGQWWGLIGFDDTRTMRRWTQLDEQLLMTAAEIIAAAIERNRAQ
KQLEKTSREAEAASRSKSEFLANMSHEIRTPLNAIIGLTELSLQEDLPEG
VGENLRASLSSAEALLDIVNDILDLARVESGKLHLEEVEFSLPRFLGGVM
RVMRHEAERKGLDFSMFLGRGLPRELMGDSGRLRQILVNLIGNAIKFTEE
GGVNVAVECVSSSGGYIAGVQRVRFTVQDTGIGIPEHLHGIIFENFRQAD
GSITRKYGGTGLGLTISRQLVEMMGGSISLRSEAGKGSRFEVELPFKVAE
THACAIEEGEDVPEMLPLRILLAEDNALNRRTMILALKKLGHQADAVQNG
AEAVEKAALKRYDCIFMDVQMPVMDGLDATRAIRGFTPDTAATAPDVHII
ALTAHALAGDKERFVQAGMSSYLSKPVRLEALKKHLVQLQAGTADGGGAD
APLMPAYDAHPVMEPYTGGQREAYRFRRFLVTVAALRESLWSAFDRGNLL
ELHSLAHTLMHEADKMGAPRVCVMASRLESRVRDARPEEVRPIFLLLMDA
INHLEHELLKIFPDARGAEGHHAG
>Dde_0772 serine phosphatase
MSALPVWKLALVIAAVTGAALLLRRLVVLPHVLSLPVARRAERLGQCDFV
LFAGAGVLMALANTVINGVPLLSSGGKLVLGMVALGVFVSIDLALECERR
SIRLAGITEPERLPPRRFSSLTRKFFAVATVVTVLFSLIVILAVFRDLWW
FTEAGLNEGSLRFVKRSILIDLSFIMGMLLVLVINLALSYSRNLRLLFDN
QTQVLVRVSNGDMSGHVPVATRDEFGFIAGHTNLMIDGLRDRLRLMEGLA
VAREVQETLLPSGVPHAAAQPSADGSGRLDVAGRCLYSDETGGDYYDFLE
NWLTEEDDTPRTGIIVGDVTGHGVGAALLMASVRAFVRMRAATPCSPAAL
LRDVNRQVVRDSYGTGRFVTMFLLCIEPVTHSISWAAAGHEPALVYRAAD
DSFTSLQAAGLPLGTMPGTVYETSCRRRLRQGDVVLLYTDGLVEARNRKG
EMFGRDRVRRVMRIHAAKDAAGLLEAMGGVVRRFKDGAPQEDDITMVAVR
VL
>Dde_0589 universal stress protein family
MAFKKILLAVDGSSNSRFAMRHAVALARCSEGQVVLMHCFGEVPNLIGGA
ARTEIAAEMHKNAEEMIQVFREDLEREGVKFTVRIEHGKPSDTIVEVADD
EKCDVIVMGSRGLNDFEGMLLGSVAHRVLSMSGVPVLVSR
>Dde_2825 putative transcriptional regulator, Fis family
MAFILVVDDEESICFTFRLFLEQAGYDVQTASSCAGALTVIDGQTPDLIF
ADIMLGGPSGIDLLREVRHRGLTMPFILITGEPSMETAVEALALGADEYL
YKPVDKDKLLLAAERWLRYKYVVDQKQRLEREKDELRRHLETVFNAVPDA
IVTVSSGFTVLSVNEACRNILGMDTAAAGGQPCDKALGSAAAECMPLLRE
AVRAGHIVQRGGVAVQHDRGEIIVDISAVPLACAATATEHSPGTDASGGV
MLIVRDVTRLTGLERALAAQHIRRSMIGRSSVMRGVFRLVESLADTDTTV
LVTGESGTGKELVADALHHSGARAQGPFVKVNCSALSETLLESELFGHVR
GAFTGATKDRTGRIQMAHGGTLFLDEIGDISPSVQLKLLRVLQEKEIERV
GEGRPVKVDVRVVAATNKSLRALVARGKFREDLYYRLKVVEVHLPALRER
REDIPLLAEHFIEEFNEHFHRRVSGLDSSAQQLLVQYDWPGNVRELRHAV
EHAFIMAGGNVIPAAALPAELMQSGRFSAQSAGTGALRHDAPDAAAQGAE
WKQRLSAALKETGGNKAKAARLLGISRQTMYRRLRELGM
>Dde_3293 methyl-accepting chemotaxis sensory transducer
MLKHLGLKWKIMVILVVVVPVMLGLTWYLTGTFMKLMERTAGEQSFELAY
RYANKIDADMSLAMHSARSVARLTETMMGHEGRFTREALRDGMENFLRDH
PNLLGIYAAFEPDALDGADSRYMNSPYHNGDGRFVPWVHYQGGAIVTEAS
SGYENDDPDGAWYHLPRKKGTEVIMEPWAYDLGGEKVLMVDMLVPLRKNG
RFAGVIGVDFPMGTIDRFVREITVFGSGYGFLISAAGTYVAHPQTDLVEN
KVNIFEQKDVSPELRAGLRKVLEGGDFSLKTEEDGAPFLLTFVPVFIGRA
ETPYIFGIKVPLNEVLAGAFSMRNYALLAGCGATILILLLILYVARVISL
PIKATVHAVEQISSGDFSVRLPADSRDEVGRMQVAVNDMAAELARNMDEI
RRQQAAAEEKTKQAEEATQQAHEARRQAEQARREGTLQAARQLEEIVAHL
SVASEEISVQSREIRQGSEVQRERIASTATAMEEMNATVLEVARNAGETA
DQAKTSRDNAMEGAGVVNQTMEAMQAIKRNADGLSMNMNRLGEQAQSIGT
IMNVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGA
TKEVGDSIRAIQQAASQNVHAMESTVEHIDAATRLSSRSGEVLAAIVSGV
EQSADRVQSIATAAEQQSATSEEINRAVEEINQITLETARAVGEATVAAE
ELARQAQQLSMIVEEMKSQE
>Dde_0720 anti-anti-sigma regulatory factor, SpoIIAA
MTLTTITHDNVTILEMRERLDGQGTQQLEKTVEELLSAGARTLLFDFQDL
DYINSSGLRVLVMAYQRLHPAGGTVTICCARDYIQEVFEISGYDKLFGMY
ETRDAALGSL
>Dde_1635 transcriptional regulator, Fis family
MCRFHPARLCATMFFAVTCREQHNVFDLNHAGSRPRSQRRGRTPQSALIM
NQINTQDSRLQPYLGTLQRIVSDMGPQRPFQSSLKSLLRTLAENHHFKRP
HLVIFDPETQTLKLSLTHDPTKAQDVEYSPGVGVTGQVFSSGQPVIVPRM
KDHPSFLNKAFGRSEEELATLGFICVPVLGPGEEASPREVIGTLSVDTPI
TDLPSLEGQCRFLQVVAGMIANQAAYLQEEMARQKHMMTQGLIGGDVAEN
TVQAANIVAASKSMRLVLNQVAQVGPSRATALLRGESGTGKELLAEAIHQ
ASPRRDMPLIKLNCAALPSDLVESELFGYQKGAFTGAVQNKKGLFELAHK
GTLFLDEIGELSASAQAKVLRAIQEQEIQRLGSEQTISVDVRLICATHQH
LEELVESGSFREDLYYRINVFPVFIPPLRERREDILPVAEHFLKEYAEEY
QKSIKRISTPAIDLLTQYHWPGNIRELKNCIERAVLVCDEQVIRTYHMPP
SLQTAESTATDSSLSFCEAVAKFEQELLVDALKKARGNMLQAARDLRVSY
RIVNYKVKKYGIDAKKFAVSKGRMGR
>Dde_3261 methyl-accepting chemotaxis sensory transducer
MVPVLPKESAVLRKFTIASRIIFLLVLMLVFSTIVGGIYTYFLYKVQDRS
LTETEAVLHEGYERSMKFAVQTLATNLAHVAQTARSSGQDPVEAMRAAIA
PVRFGGDGYYFIYNTQGYTVAHPLRPDFNGQPGMDKKDQKGNQYIRQLNE
KAMSGGGFVTYWFNKPNEREPSPKLAYAQMIEGTDLWLSTGVYVDDIQEE
RERIRATLEALLDEARNIALTVVGVLFLLLVLPFAISIVRSILLPLRAAT
GNAQQVAAGNLDVVIAVEGRDEITRLEEALHTMLATLNNNIKEIEVKSRH
AEEQARAAEQAAKQADEARKAAENAKSEGMRAAAARLETIMHHVTSASES
ISGQAEEMRQGAELQAERIAGTATAMEEMNATVFEIARNSAEAAEAGMQA
GEKANAGADTVRMSIKSMLHTQEQAERLKTNMAHLGTQAESIGMIMTVIE
DIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGATKQVGD
SIGAIQQVARENIDSVEAAVASLNEAVGLTEESGTALKEIVDSVERTAGQ
IQQIATAAEEQSATSEEINRAIEEISNITRETSEGVSSTVSSLSDLAEQL
DTLNSLVQELKSS
>Dde_3038 PAS/PAC sensor signal transduction histidine kinase
MMNSVSEGMKEYTGCPVADELLLAGLDDPLLIVAADSGHMLWTNQQGAVW
CGLYAAETAAVQGIPPALASGWQHLTGLTVCGRLCCADALAVQWRGRRAV
LLRGRTDTGKKEPPAENAQAGVGAPCAPRREDERYRIVYDTMAQGVVFQD
RTGSIVCANAAAERLLGLGSDAMRGMDSHSGSWQAVDVDGSPLPGSAHPS
MVALRTGRPVSGRVMGIRHQTTGAQRWLVVSATPLFTGGGSVPAEVFSTF
EDITELAAARRELALYSERLQQVIDRSPLGVFLWQYQDGRFTFLHGNPAS
EAMLGITVAEYAGQELLEMLPELDPAVVPAEYANVMRTGIPWHSEQLDYA
DDVISGAFEVHAFRAGSEVLCVMFQDITQRKRTEAELATVTSLLQELIDV
MPSVLVAVDTAGRVTRWNHAAESLTGISAAQAAGRELDGLFAWPAFVRNL
LGSVQDGPECAHLEDAAWEHDGVVRHWDVTMYPLKEGGGGGYALRLDDVT
SRVRLREMMIQSEKMLSVAGLAAGMAHEINNPLGAIAQAAQNCLRRMGTG
LPANLHTAGELGLDLYAMQTYLDRRGIYAFMEDIRHSCSRAARIVSNMLA
FSRTEKSPRSCADIHDVIRQAVVLAETDYDMKRKYDIKRVRVRYDFAENV
PQVWCSVQDLQQVFLNLVRNSSQALSEQAGHAAPELLLRTSLQPEGRVEI
RVCDNGPGMSEEAARRCFEPFYTTKPVGEGTGLGLYVSYLIIKQHQGTIH
LNSGPQRGAEFVISLPALC
>Dde_0644 putative transcriptional regulator, Fis family
MNQQGAETEQDLRARVPDERRATLAALELAATLSHFDQRLDRMEGVDSIL
RETAAKAQGLVEMQSWAFFLVDPETGDFTCALTDGPEDRLRFEREVDALI
EDRTFAWVLGRNRAVLVPSGIGAAGRLLLHPLATSSGLWGMFVAFTGEGA
ESTDLGFYLLTVVFFSCASMLESYSLYRQLQQVNEGLEQQVADRTRELVS
INSSLEREVEERSLAEQQLRRTLNEKESYRQHLEAVFSSIQDAIITVDLN
GVVLNINAAAEKMLGIPAAQAVRMHHTALQLPCARACQDVLGATLGSGTP
VREFRAVSEDGAQVMILGGTPLISLDGTFSGAVLSCRDITRLVSLEQQLR
QRHSFSNIIGRSKVMQSLFGLLENLAAYDTTVLVTGESGTGKELVAEALH
YNGARSGGPLVKVNCTALSESLLESELFGHVRGAFTGAVRDRAGRFETAE
GGTIFLDEIGDISMRIQVLLLRFLESKEFERVGDTTPRRADVRIVAATNA
DLHRRISEGTFRADLFYRLNVTSVHLPPLRERREDIPLLVQHFVEQCNTE
LGTRVAGVDEKAMAALVRAPWPGNVRELKHTLEHACVLCRDGYVEAGHLP
AELAAVESPPVRFDAAVSGPVSAAAGGAVPQPVAGGFGRRQLDARSITAA
IEQAGGNKARAARLLGVGRATLYRKLRELDMSI
>Dde_0168 extracellular solute-binding protein, family 3
MKRVILAAFALVMLLSANAWAQKLVVAHDTNFKPFEFKDETGNYTGFDIE
LWKAIASEIGVEYTFQPNDFNGIIPGLQSATFDAGIAGITIKPERQEVVD
FSDPYYDSGLVILVRADNNDIKGIEDLKDKVISTKLATSSADFAAGFAPK
DNIKLYPNNDAMFLELLSGGADAVIFDMPVVKDFAQKAGKGQVKVVGPLY
QGQSYGIAFPKGSDLKPKVDAALKKLRENGTYEKLYIKWFGYAPAKK
>Dde_0711 multi-sensor signal transduction histidine kinase
MNRLLEKFSALSLQNKFFFSILAVIMIISGTIALLARWILVSSLTTELEL
RGTAVAHSVAARGASHILDNDRPQLLNLIFDEAQLRERQQLVAYIFVQDK
DNTVLGHTLVRPLPPQLAGANPLPAGVSRSVKVVSVHGEPAYDIAVPIYE
GLYRIGTVHVGLSKDHIDRLVGKLRITFLGFISAVIVIIFLISHRLSRYI
TAPVVQLTRISDDLSRGNFQSAGTLDGAGSGWTITDCPAYDDTDLPCWHF
DEQMKSHMSPESLHRCKTCVFYRKRKGDEVLQLTDSFRNMVWSIKLYRQR
LQESEGKYRSLFDSGPDPIFVVDCTSHTILDANPRAEEVYGYGRGELTGT
SFLEVGPDPNRECLAVFEQGGEAESATGCLYFSKVVHYRKGKVPFYVNMH
ACPIGYRGRPAIIVATTDITDMMEKDAQLVQASKMKSLGEMSAGVAHELN
QPLNAIRMGSDYLAMVFSSLPQNNEGHICISAGHAREVLEEIGAQVDRAT
EIINTLRSFSRKADFLAAPIDINAPVRAVVSLAERQFQLQNITILLDLQE
NLPPVQAHDNRLQQVFFNLISNARDAIQERRRSQEKPTDGRIVITSRAAE
QQVVLSFSDNGCGFPEAMRDKVFEPFFTTKATGQGMGLGLAISYGIVRDY
GGQIRAESKTGEGTTFHLGFPVHDPRGATHTSRAATARGGTQTERDTPEN
GA
>Dde_1322 methyl-accepting chemotaxis sensory transducer
MTIKVRLIAGLGVLVFLTVLLGGVGIFALEQGKKDLSHLIDEQVELRDMA
DAIRYGAAQHRRFEKDLFLNIGDRERQQRYLARFREASAALGADIERLGR
IVSASSAMSEHRRLPDVLKQAHADYVRAFESLAAETMDDPDLTPQEANRR
FGSAKEHIYLLESTTDEIVRLVTHGLDSYIELILSRNNTLRLLMICLTVF
VAAAGAGAARWLFRSVEVPLAAVIEHTEQVADGRLDHRSTYRFSGEMQTL
FGAVERMVQSIKERILHNQAIINGVPDPIIVTDAGCMITSVNAAALELLG
KDEKTLAGQALTSVLGRDFHGGESPVETIARSGAAGHALTFAHASGGQER
YYHARAVKLADGGGHVYGYMEVLQDITSVKAGELNALRQSERLAGIARKA
EGIAANVAEASGILEEQVTEAARGADQQQQRSSESATAMEEMNATVREVA
QNASDTHLMTEDVRRKASHGAELVDGVVRAVDGLERQSLELRTEMEQLGA
KAADTGKVLGVITDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKL
AEKTMQATGEVEQVIMGIQQYTARSVQATETAVRAVSESRGLAGEAGRML
HEIVGAVHTASDQVNSIATAAEEQAATSEEINRIIMEVNEISDDTAQRMA
EAEHAVRSLSGEAAALRALIDSMHDET
>Dde_3508 methyl-accepting chemotaxis sensory transducer
MKSLGTYTIGLLLAASLAISAACGILFHLQEKKVRQETLQNEYATMIHSL
QQRLEKKIDIGITNSISFASSADLVHLVRTQDREGLMRHVSSIGDIFKKT
SNFRGIRLHIFDAEGRTLVRSWNKDKHGDAPAAAGEVLRAAARQGQAASA
FVLDEDGLLLRGTAFIGQPDNIAGYIQFIQGVGSISRDFEKEGMFFVQLV
SADGASPPDSLRNNTRLGGYVLANNKWFSSSVVQRLEDIDLTRVTRDRYF
ISDGLFVVVEPVLDLQGRQTGLYLLAKDAHIVEAKISAAMEAGLYILITM
GFGFLIIFTVIYAVLRIKVITPLVNIKKFAEEVAAGDWQATPRGAYAFEF
DVLKQSLLSMVHELEAANETAEQKSAAATREAEKSQRAAEEAAEAKIQAE
KARSEGVLYATRQLSQAVSGIMETADELARDIDGCSQGAHEQAQQLQLSS
TAMEEMNASVMEIAGRTGQNAESTEHARKEADSGNSVVQEVIRSINEVHE
IARNLATEMDELGKHAAGIGQVVNMISDIADQTNLLALNAAIEAARAGES
GRGFAVVADEVRKLAEKTQSATKEVERSVSAIRTSITGNIANAQNALAVT
QTANGYAADSGKALETIVRLISASSQEVSAIAHSSEQQVEASEAINASLD
KVATLSSSTVSLMEEAAKAVQHLAGLATQLRQIICSMEDENNPMC
>Dde_1454 universal stress protein family
MPAINKILCAVDFSSHSKDVAEHARLFAKSLGAEVIVVYAAPSLSQYVGF
HVPTASIETLVGEIVTGAEKTMEAFVSENFADINASGRVVTGYAAEEILD
VAEAEKVDMIIMGTHGRKGIDRILFGSVAEKVVKSASMPVLTIRPEIED
>Dde_3223 extracellular solute-binding protein, family 3
MRAAVIFLSLAACFTAWGPPAMSQEPPREVRIAAGEWPPYISAAGSGILI
DIITQAYEHAGYVAHTCVLPWQRAVSKVTDGSMDVLLAVYDSPRNRERYT
LSSGLLRIDSMFAVLAGSPAGAPGPTAAHTLGVVKDSMFGPELLRRGFSR
VEQAPDEDSNMKKLLTGRVDAILDTEATLLESLNRLSAVEQQGIRLLCPP
FASRPVFAALLATNDRSTQLLAALEEGLAIMHRDGCYDRIRLRYGLTPNA
IANLPRPPAPRRVQASGL
>Dde_0532 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MQHDPPRVLSIDDDRNVRENIVAYLEDSGFDVVEAENGRQGLEEFERSAP
DIVLVDLRMPVMDGMQFLAELRKISKRIPVIVVSGVGVLEEAVEALRHGA
WDYVTKPISDMVVLEHAVNKALERARLLDERDRYRERLEQEVAERTGELR
ESNERLLEFQSLLQEKNQFLEALIESMPNPVFFKSLEGEYLGCNAAFCRI
LGKPKEDIVGRRAEDLLPEEVACRVLEGGVLSGAQERAHSCTITMLGDDG
GPLQLVLYKSFFQNRAGENAGVVGTFHDITELKKKEAQIYHQAYHDELTG
LANRVRLKDAIADRIRLGGDGGLAVLMLDLDNFKNVNDSLGHGVGDKLLL
EASRRLRDVVGPQPLLARTGGDEFALLLDGCKDVANRLAAKVLDAFTVPF
VIDEHELYITISIGLTCWPEDGADADSLVKNADVAMYKAKEQGRSRCLHF
DAEMTEQVTRRLSIEKSIRKGLERDEFQVYYQPRINIFNGRLVGMEALVR
WVPEHGAVVSPAEFIPVAEETGLIVALGERVLRLACAQMRIWADRGWGDL
RMSVNISARQFQANLTERVAAALRDSGISPDSLELEITETTMMRDIGQTV
LLLEQLNGMGLKIAIDDFGTGHSSLYYLKRFPISTLKIDRSFVRDIMKDD
GDANIVSTIITMGHNLSLNVVAEGVETDEQLAFLRDKGCVEVQGFYYSRP
VPAAEFEDFVLRHRS
>Dde_2105 Protein-glutamate O-methyltransferase
MAATTGIAHPRVMSSKSFQKLSQFIHTQVGIKLPQGKKVMLEARLQKRLR
VLGMDSYESYVDFLFTEKGQQSELRPLIDVVTTNTTEFFREPKHFEILVQ
DILPEWMRRTGGHRTLRLWSAGCSFGMEPYTLSMVMHEFAGWNKSFSFSI
LATDISTRALQHAARGVYEQDKIGSIPQQFRKKYLLRSKDPNKALVRMGP
ELRQTIDFRRLNFMEEFSFDKELDIIFCRNVIIYFDKPTQERLFRQFCRC
LQKDGHLFIGHSESLSGMALPLEQIAPTVYRRV
>Dde_1077 methyl-accepting chemotaxis sensory transducer
MKNLKLAMKIGIGFGLLILIACTLGGLAVFNMTRTAADSERLAYEYVPEV
RMANSLQNSAATAMRMMLGYALSEQQSYRQNALKELAEARKFLNQAKEHA
QKYPDLVMLAQSVEKAEGVLNQYERRAQDTENLIGEIASSRAVMDQAAAL
FITNCTAYIDSQQQKIEQEIRQGLPAASLVERSLKLKWANDVVDMGNNAR
ILNFRAQALRELSLLEDAAKSVGRIDEPLRDLKRTSRSQDNLRQLAAIET
AGQQYAASIQNLLANWQKLREATVDRGRLSDEFLVLCNEIARAGMEQTQN
IADVAMSNMNTASTVMVSGLGIALLLGILVSVFLTRAITGPIVKGVGFAN
SMAQGDFTKLLDIDQRDEIGQLAAALNDMVTKLRGIVAEVQSASENVASG
SEELSASAQATSQGATEQAASVEEISASVEEMASNIRQSASNAKQTEEIA
LRAAKDAQSGGQAVEQTVTAMKQIAEKISIIEEIARQTNLLALNAAIEAA
RAGEHGKGFAVVAAEVRKLAERSGAAAGEISELSSSSVEIAERAGEMLRQ
IVPDIQNTASLVQEIAAATSEQNAGAEQINKGVQQLDQVVQQNAAAAEEM
ASTSEELSSQAEQLMSTMGFFRVDTSGHGSSPRMATVRAGKSHRGAALPA
SRALPSDDRGMRDKAPEKKNSGGIQLNIENDPSDEDFERF
>Dde_3040 two component transcriptional regulator, Fis family
MQHYLVATDNQPAAKAITRSFSSQAELTVVHSPQELHAALGRRIPDVLFA
DVSWLDRSPERTLDTIRTALRALWAIAPNLEVIVLAGQENIREAVKSVRA
GADNYLTYPVSAEEAAYVLESLRESRMMQTELEYLRSSADGKTRIPLEQV
HSTVMQTVFDKVRRVAATDTTILLQGETGTGKGVLAKLIHARSNRSKGPF
MGVHCGAIPETLVESELFGHEKGAFTGASKRKPGRFEVAAKGTIFLDEIG
TISLPTQVRLLQVLQDKVFQRVGGVNDIPMEARIVAASNVDLEELVKKGQ
FRADLLFRLNVFPIRVPALRERREDIPLLAETFLQRLRQRQMKKIQGIHP
EVLTAFQNYAWPGNIRELENLMERAYILETSHMLSPDNFPQDLFAGGAPL
ANVSLDLSLPLAAVRNQAKEQAQRRYIEELIAECRGRINLTAERAGITTR
QLRKLLTRYGIDKSVYKQSKSGTSGTQK
>Dde_0289 putative transcriptional regulator, Fis family
MSIALIAPYESLATLCRSICQELDLDVSVHTGSMEDGVRIARNLMAEGVD
FFISRGLTAQLIREQCPLPVAELEVSAFDIYLCLEPLLRSGKSIGVVGHS
DILRKAKGASAALGFTIDFYATAHPGGMGHIMEAARRQGIAAIAGDAVAA
RTAERYGMEGVLVQNGADSVTNTLQYAVATYSYLTRQATMAGRLQTVLDR
MDGGALLASPDGRMLHCNAAVRAMLEPDQGCTETSMDDLFPQLDWRAVPE
GRAETVRELVTVGGSKLAVTVTGTMHDDAMDALICTFHDVRQIEQLEHSF
RKSAKPDTPTARHTFSSIVHRSPAMHRCIARAEQFAATQSSILLVGETGT
GKELFAQSIHNHSPRAQGNFVAINCGALPEDLLESELFGYAGGAFTGALK
SGKAGMFELAHNGTLFLDEVNATSPKLQTRLLRTLQEHEVMRVGSTAVIP
VNVRVIAASNAPLEAEVSAGRFRADLFYRLNVLDIRIPPLRERPEDILLL
FNMFLERFSAEQHRSTPPVPRGTERKIMAHGWPGNVRELQNYAEKYAILY
PEEAALGADITPWTPHAALTAEHAHTPAYGTAAAPVSRDLLHGTLEDITR
AAVAAVLHEENGNLSSAARRLGISRNTLRRRLG
>Dde_0239 multi-sensor signal transduction histidine kinase
MQVVMSQLQDEIILFAPDDAHEAPRQSAGGAWDILVVDDDEAVHAVTRMV
LQHLVFDGRSIRLDHAGSAAGAEEKLRRNTYALVLLDVVMETDNAGLELV
RCIRDLPALAETRIVLCTGHPGQAPEERIMMDYDIDDYRDKSGLTSQRLK
TAVFAALRSHQRLCENRDQRLELARSRNRLQALMGALPSAIVGISAGGHI
ILWNPAAERLSGLPEGEVTGRDFAQPLEQLSVDAALLHRVMQDGETYTRL
RERVTLPQGTTIVRDLHIHPVPQAGGAVVRLDDVSVRDRMENLMVQSEKM
LSLGSMAAGMAHELNNPLGAVLQGVDTVRRRLDGALPANVRAAHETGLTL
AALGRYMEQRRILYFLDGIEHAGRRAAVIVRDMLDFSRQSGEKQPADVHR
LIAAALELAEKSYDLHDAWDFRNVQVERCFASSLPQIPCAAQEIEQVLLN
LFHNAAQAMTPAVMQNRTPRLCIRTAALETGVCIEVEDNGPGIPEDISKR
VFDPFFTTKPPGKGTGLGLSVSFHIVVDRHGGEFHMISPESGGACFRILL
PYTAGRGAGAQQQAC
>Dde_2104 response regulator receiver domain protein (CheY-like)
MARHIKVLIVDDSALVRQTLTDIFSADPELEVVGTASDPFVAVKRMETVV
PDVILLDVAMPRMDGLTFLRKIMSQHPIPVVICSAVTEQGAEASFKAMEY
GAVEIIQKPKVSTKQFLEESSIRICDAVKAAARAQLRKLAAKRFEVTPKL
SADAMLPANAGRSVVQRTEKVVVVGASTGGTEALRVLLEAMPPDCPPIAI
VQHMPEHFTAAFAGRLNSTCRIQVKEASDGDVMQRGQALIAPGNLHLLLK
RSGSRYYVETKEGPLVRRHRPSVDVLFRSAARYAGNNAVAAIMTGMGDDG
AAGMKELHETGAYTIAQDEATCVVYGMPHEAVKLGGVDAVLPLGALAAAI
VKACNS
>Dde_0320 periplasmic sensor signal transduction histidine kinase
MEQQHCSRQGWLVRLFDPLGGTQSSQRYYYLRRNIIILIVSVSVVPLALM
AAINFFMYQDSLKNQAESQVRTLINKTRHSFELFLHERLASVAFIAGAYT
YDQLKDEKALNRVYHAAKKELAGFVDFGLINANGTQVSYVGPYDLKNKDY
SGQDWFQQVRVRGTYISDVFMGYRGIPHVAIAVEHLDEDGARWVVRATIN
TDRFEELIAAMGLGSQSDAFLINRAGVMQTDSRHFGKVLEKAAITVGPGT
HQPEVVESTGLNGQKIFVGHVNFGNPELTLVLVQPISVAYKAWNKLRMEM
LTLFLGSTVLIVFVVWALTGVLVRRIREADDKRAAAFREVEHAHKLSSIG
RLAAGVAHEINNPLAIINEKAGLMNDLMEHGNDEIIRAKFPELVASVLQS
VSRCRTITHRLLGFARRMEVQVEPLDVNEIVREVLGFLEKESLYRNISLE
LNLDDDLPRISSDRGQLQQVFLNIINNAIAAVDNGGRVQITTRSVDLDTV
AVLITDNGVGMSDEVLSHIFEPFFTTKGAEGTGLGLAITYGIVQKLGGRI
AVASEEGKGSTFTIELPKRAKPQEES
>Dde_1612 conserved hypothetical protein
MGCEWLLTQLCRLRLCAGQVGYAAQIDGLQGILQAFFFYGAVDLHRGCTA
NRMLPQGIRACDGRISVEIRYDKTARSVKQLQQTLAAYLDALPALMWHVD
TVRNEMIFFNDHKVAGLNGKIPLMLRNMSLAQALVHPDDFSVFRGALDAV
RVLQPCSVSFRVHDDAGNWHWLVLMGMPAPDESFGYVGLAAECTSLVESM
MERGADSLLAGSMELLDSPALLVDFTTKNVQAANAAACVCFGYAAAADFP
SFETMLEGTGEQYRRSIYEHLIFHASWRGALTLAGNGGMRMCCRAQLRPV
SREGHNYLWVSLTPAVQPAEAAPVSSPVSAALREALSRAADDMSALTAVL
EHQPQGMQAEGVMLSRIYAADDKVEVTGAGVPFDGMEPGTAYPYRGSIAE
NIVRYNLPYLVVDETARSIRPIDWALFIPGGIHSYYAEPFYAGDTLKYVL
IYCSTRSEAFSADGAPACKEVVRLLAQTLKRLD
>Dde_1421 putative PAS/PAC sensor protein
MAETASDRTRELSRGSGRTGAGSKLLWFGIVAALFTVATAATLVLVSIRN
LNADLEESVRKQQSIMLNGQVNVVTTWLDAMVEQGNRLINADLFRLYASE
VDTLDDDLSALLSGENTELAVQLPMMRNLLREFVQYSDFVSGRIMNRQGS
SYIATDASVRPLTPVQRQYADRTQQTGLPVFSNIRLSSAGLVVDLFLPIY
PPRYESKEPTPVAVLMLTKNVSAKLGDILQGGHGRGQSMKLLQRSGERAE
EVAPWLAEGVRTSAGLSLGDDALPFGSRTSVSGSGEVYSMGLRVPGLDWW
LVQEADIDVAREPLQQRARAVVGFGVLSTLVILCMLGGFWWWLVGVESRK
VAREMSKLAGQVEEQKRFLDSINATIADFICLKDDKGVIRYANRAFAEAV
GRSEKELDGLDFAAVFGFDTARRLTATDEQVLMSNEPQTISETIYLQSRK
YYFQISKTPFRIARRDWSGLVYVFRDITELAEAQERSRKLVQQTVDALVR
TIEHSDPYLAGHSRTMSGLSAQVAKAMGLSALEVATVQAAANLSQVGKVF
VPKEILNKPGALDEREKKEMERHVEHARMVLADIEFDLPVLQVIEQMNEK
LDGSGYPAGISGAAISSPARILAVINTFCAMVRPRAYRPAVPVDDTLDAL
ERMQDKYDAEVIARLREVVESATGEKLLQGLENAGRA
>Dde_1941 response regulator receiver sensor signal transduction histidine kinase
MIHTAERFSVLCVDDMPANLAVLDGILRDEYIVLTATNGHDALEIATGDS
PPDLILLDVVMPGMDGYQVCRTLKKIPATAAIPVIFVTSLDDEGNEEKGF
SLGAVDYVQKPFSQLVIRARVRAHLVIYRTQRILEKTVRERTRALERAKE
KAEEANRAKTVFLANVSHELRTPLNGVLGMAQLLSSTSMSGEQRYLLASL
KQSAGRLGSLVSDILEHSSLEAGMLRPSQDNFVLKEALAPLIRHFGAVAD
KKNILFTHTVQDGVPRTLAGDRGALIQILHNLLDNACNYTSVGTVDLHVA
LWTCENICTADNRKAVWLRFDVRDTGSGIPEAKGGDIFAPFSIAEHFLTK
RLGGAGLGLAVARQLAERDGGEISFVSKEGVGSTFSVVLPFLLPC
>Dde_3660 transcriptional regulators, TraR/DksA family
MQHAGMRGITLKHRKTATNGVMVMNDQQLGTIADSLRDRVVFLKQQCGLA
PETAAAVIACPDENEQASRLAELTLDVALRGRLARQLAAVESALHRIATG
GFGRCEECGDEIGEARLKANPTTTLCIHCQEDREAEAARRYLLRDPVCA
>Dde_3226 phage shock protein A
MGIFSRFKDIVSANMSAMLDKAEDPEKLIRLMIREMEETLVELKANCAGT
MAEATRVGRELDVVEKARERWAQRAELAVSRGREDLAREALLEKRREQER
ADALLREMAGCEALVAEARNDIATLEEKLASAREKQRLLMQRHAHARVRT
QARRDVNRAVSLDAMRRFDELEQRVEFMEAEAEIEVPQRKPDLEDRFAQL
EGADEIERELDALRRKVNPSA
>Dde_3087 diguanylate cyclase (GGDEF domain)
MKQHSETNTVRFTCDRNGVIRHVVSDNAGLFAGIDLPLHINDLTTASAQK
RYHAFLDTLTADGFGLCDSLVLRGRTGVRQFAVFGVCKGDCFHMIALQSS
PHITNIFSELIHMLNEQGVLLRATQKKAAEARSTGSDNVQLLEDYMIINN
ELSRNKRELAIRHEQLKKAFSDIEELSRTDPLTGACNRRKVIEFLSAEID
RSKRYGTPLSILSLDIDRFKAINDTYGHAAGDDALIAFCRVCRQQLRKTD
LFGRTGGEEFVAVLPHAACRDAQISAERIRRHVEQIHITYNNACVRFTVS
IGIAVHEAGENTDTLLRRADAALYRAKTAGRNTVSVAEKSPVMPAETPHG
HSPEQPAAGHK
>Dde_2585 methyl-accepting chemotaxis sensory transducer
MTKSIQTILILILVAVVTTILTAFGAQSYYLEQTKQLALLTNESNRAAAR
LAVNMASPMWELDEDLASDVVASEMQAENVHTVVIWEPDQEKIFYGRTKA
GTEEAEADQLPEGSDYITATSEVLHKESVIGVAGVAVSKANMRADLRATL
QKIALTTITIDALLIFALFMAMRSVIIKPLKSIEEYVVSISNGNYDVGFS
AARFLGELKRLRTAVETMVENLKRNISEIQIKEKEAAKAAAEAKQAFAAA
EESKEKAVRARREGLLEAAGVLKGIGGRIREASSDLSEKVDAVTSRSDQQ
RERATSTATAMEEMNATVLEVARSASEAALSAEESRSTAGLGSSKVVELV
TTIKDVVQQTENLKNSLNVLGSHAEGIGRIMGVINDIADQTNLLALNAAI
EAARAGDAGRGFAVVADEVRKLAEKTMQATKEVETVVRDIQSSSQINISG
MEQTSEVVRTSTTLAEEAGRSLEQIVRTIEMTSDQVRSIATASEEQSASS
EEINQAMVHINDLAAEIADDMALANDAINELSTYANNLAELIEKLEHDGE
DN
>Dde_3231 putative signal transduction protein
MNETSHSLEYEAFIEEARHVVEARFGHTGTTGEVPRLLLRHGTVRMARDM
ARGIRPCQVKMPDVSGLQYGDFAPLDPLALLRDEVKLPSLPAVVAELRDV
LSSPNSSAADVARVISRDAGLSAFLLRMVNSAFYSFPSRIDTVSRAVALV
GRQQLSTLALGVMVIGAMRDLPVAHLDLSLFWQHSIACAVVAGQLAEAAG
MEEPERFFVAGLLHDIGRLAVFSLLPDRAAAILSMCSDYGMPAQDAELRV
LGFDHATLGGMLLRKWNFPMSLVFSTLHHHVPERSVRHVEPAVVHVADVV
VKGLGIGVSGMHQLPGFKEDAWQRLGVSVAVLEQLIDGLEERLRDTSSLL
LE
>Dde_3148 hypothetical protein
MPHTRPMLLFFTGAILLVLFSAVPRTQAGNGTLVLGAAEMCRQEHVQLVG
QLYSAIFAHVQRDVSIRPLPLKRLEKLVESGKLDGDFLRADDGTNLNGML
VKVDEPVFDIRYSLYVTDPELQDISTLQRLTRPGTRALQVGYIRGSVTGR
IAAQTLAAGHTIYRLNTYAQGIDMLRAGRIDMLIGAATVLDCMLATRNDA
QPAVIKTGKAVEMPGYIYLAARHADLAPRLKEAIRRMKQDGSFRAILREA
DRL
>Dde_1533 GTP-binding protein TypA
MTTIVNEKLRNVAIIAHVDHGKTTMVDAMFRQAGLFRSDQEVQDRIMDSM
DLERERGITIAAKNCAVNWKGTKINIIDTPGHADFGGEVERSLSMATGAI
LLVDASEGPLPQTRFVLKKTLEAGLKVIVVINKIDRKDARVEEVLNEVYD
LFIDLDASEEQIEFPVLYAIGRDGVAMRDPQDPRQDLTPLFETILEVIPG
PAHNPEEPFQMLVSDLAYSDYLGRLAVGRIIHGTAQAKEEMLCVGEKENQ
TLRATKLQVYDGLSLSEVQSAEAGDILVLAGIEDVTIGDTICTKAAPRKL
KRIHVDEPTVAMRFSINSSPLAGREGKIVQSRKIGERLFKEMLRNVAIRV
EETDDKDSYLVKGRGEFQMAILIETMRREGFELNVGRPEVIFKKDGNTLV
EPIERLWVDCDEPFMGVVTEKLSTRKGRMVNLINNGTGRVRMEFSIPSRG
LIGYRDEFLTDTKGTGIMNSYLDGYEPHRGDFPTRYTGSIVADRAGTTVA
YGLYNLEPRGRLFVGAGEPCYEGMVVGEHNRDNDIDVNPTKEKKLTNMRA
SGKDENVVLTPVKPMTLEQALHFVRDDELVEVTPVSIRIRKAELSAQKRH
AAQGAKKKASLLKK
>Dde_3469 Ser/Thr protein phosphatase family
MHEAMPVAILSDIHGNLPAFEAVLEDMDACGVHEIISLGDNVGYGPQPDE
VVRLCMRRGVISVAGNHEAGVLLERERRRFNFQSHEALMRTIALLSDCAV
EWIASLPRGLSRHGCRFVHGMPPDSVHKYLFAVSGGELKGAFQAFLGPLC
FVGHTHDLELVCLRGGVLERRPLEQGPCLFEPDCRYIVNVGSAGQPRDGD
NRAKYALWWPDDGRLEMRFVSYDIERAVALFAERGMPLRYAQRLR
>Dde_2558 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MPQFRHSIRFAALLGTLLLSAVFAGVSTLVALWGTNSFAEEQEKQTAAAA
LKDTVLIMEDSLRHLGEQAQLLAWSNRLYNLLYGGNSGTAELPAAIVERP
YTDFQAIVLLDQEGRFLFGRTVFARRDAGVQPDTRLPAPLRAYLETLVPR
IHRASPQSGTRGLARIHGELHMLAAVPVLTARMEGPAAGWLALLRKIDEP
YIQQLSARSGLRLQLHENTATALPAPLVDLAAIRRLGSAAPPVVTIYEGD
TYAGTVLPELKDGLPVAVTGVRVNSLTHIIRQILAENLLLTVPVALAAFM
AGFILLDRRVLKRISSLVSAVRASGSGVHAAVRPSGSELDELEMLLSAAT
DTALRNERDTARIMDSLPVGLMVIDPKTRAIVSLNRAAQEMLGFTEDGLL
GRDCSSVVCLATDEPCPMLDTANPQHHVIRTMRRADRTEITALKSTAHIN
DGRNDFFMEAFMDITDLERKWLSHRNEAQRLSAAFAGLPAPVTIMDSGLS
IIQANKAFWRMTGAGHSVQNEITPLSRFIHPEDLPLLAGLDRSASGVSGV
SGDAVAELKLRMVDASDTVHFVLMRMTADAAPRTIVYEDLTARQHYEEER
MRQAYTDHLTGLPNRQYLYSAGLEKMAGEAAPEQSAGLCLINIQGLDVAN
NAAGLAAGDAVLLQAAQRMDKARAADHTLIRYGGDDFLIVMAAPCTADAM
KTLAEKLHEAFETPFMTGGTEYTLQLSFGFALYPEHGDTLEELIRRADMA
MCHSRFQADGQFCLYHKSLDTLRQYDAGKTGTLRTALENGEFLARYQPVV
DLRSGTITGAEALARQVLQNGHESPPAGFKRSAERSGIIWNIDLTILQQA
CRDAARWHTLGMPAAIAVNISPAFFHRHDFLAHVEAALKDSGLPAGLLTL
DMEEAVYLHDYRKALGTLDSLKHMGVRPALGNFGTGYSATAHLHDLGFAA
LKIDHTIASALPGAPAAALLRSAAGVAGSLDIPALSGGVETEFQRSFLLG
LGYAAGQGFLFAPPLPAAQMEKLFTEQPRFSAARS
>Dde_0867 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MERFYRELLDTLTDGIYFVTSSGKITYWNKSAERLSGYAASEVVGKSCGD
NVLRHVDDCGTPLCLTGCPLAATLRDSKIREARVYMHHKQGYRVPVLVRT
FPMADAQGNSIGAVEVFTDDSKNINFKKEMEELRREVLTDPLTEVGNRRY
AEIILERMQVSMNDVGSPYAVIFVDIDLFKDVNDTWGHIVGDNVLKMVAK
TIESSLRPLDAVCRWGGEEFIICVPGATKDGVMQLMERLRMLVQESWIMH
EQHKIAVTASFGAAICSQGESSESVAQRADEQLYLSKNTGRNCVHLDGVR
GEQCSRPSCRCA
>Dde_1405 two component transcriptional regulator, Fis family
MSSRRILFLAPAQSVTRIFPQLKEAGYEVGIAENLKGASAFIRKSGPSVI
FSRPQLPGYKVEDLLSVSADDSSFPPVIIFTDKGSAEEAERFLGMGARDY
WLEPLQFEKVKAAVPAVPRTPASAPASSTLGGRTPLPEGDGSRIIGSHPA
VARVLALAKQVAPSRATVLISGESGTGKEMFARYLHRSSDRADKAFVAVN
CAALPEHLLESELFGHEKGSFTGAIARKLGKFELASGGTLLLDEISEMDL
GLQAKLLRVLQEGEIDRVGGTETIKVDVRVLATTNRSLEDWVKEGKFRQD
LYFRLNVIPLRLPALRERGDDIVRLARFFIAMYVRDYGLPPLELAPAAVQ
WLEEYDWPGNVRELQNLMERASLLAGKGPITVSHFLLDPDSWPVFADEGS
HEQQPDQEHCDGASPESVTDPFSGGVIPLHEMERIMILKGLEQTSGNRTM
AADLLGISVRTLRNKLNEYRSAGLEIP
>Dde_0211 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MSIYGHPFLLPAQAAAACLTLLAAAPAVPAAQRTADVMAGTWTYGGRPYM
LLLGILVVVSAGMAVTGMVRARNAARRAAQMEKLLRQRLGETTEWADRER
EIRTLMHHAAIGIYRSTLDGSRFTEANKHLALLYGMHDEKEFLRTVTPLD
MHPSGQNRQELMQKLRRDGVVSRQKILLRDKSGSLRHAITSALISSRNES
IFGLIYDMTDEHNSKEEMRRTGAMLQSVIDAMPNPFFFKNARGRYKIVNR
AFCRLVNRPAEALVDRTVEAFASPAMAQIYNDADAVLLTAAGPAVQRYET
VVESEEGGTEVLLYKESICDDNGTITGIVGAAFDITSRKETESALRQAEE
RYRTIFMHALDGIFTCTPQGLLLEANPAFARMFGYESRETLLETVPSVRS
LWVSSQTHDEMMGLLCNRPQLTAQRAEMLRRNGEHFWAEISCQAFYDTQG
EVTRIEGIISDVTHHMMQERELRTQASTDKLTGLMNRYGFDEAFERLLAQ
AQRSSRKVGVAFIDLDGFKEINDRFGHDTGDMLLKEVARRLQQRVRETDI
TARPGGDEFAVLLWDVGGTEDLRRLGESLLDALRPPYRCDANVCTLTASI
GLSLYPDHGLTAGTLLRQADQAMYAVKNAGKNAVRLAV
>Dde_1576 response regulator receiver domain protein (CheY-like)
MSKHILIVDDSKTVRNLVAFIMKKEGFRVTMAEDGLDGLEKLYSAEETVD
LIISDVNMPRMDGFTFIKTVREQDTYRDLPIVVLSTEGQEKDIQMGMSLG
ANLYMVKPAQPDKMVKNIKMLLG
>Dde_3227 transcriptional regulator, Fis family
MSRRTQPHAAHVEALGSSDVFLAFQEHVSRAAKVERPVLLLGERGTGKEL
AATRLHYLSSRWQGPLVTLNCAAISPALMESELFGHESGAFTGAERQRRG
RFEQAHGGTLFLDEIGNMPPAMQEKILRVVEYGVFERVGGSHAVETDVRI
VAATNVDLARMADAGRFKRDLLDRLAFEVLTLPPLRERGEDIMLLARRFA
ASMAAELGRPETPRFTPHAEAALKNHSWPGNVRELKNTVERAVFHSDGAL
IDTIETDPFVSPWRQGLAAPYPEHHGTENPDPPSQRPQAPCPQGDTAPFP
SSVPDLSIPLQRAAHALEQEYLRAALERTRHNQRQAAELLGLTYHQFRGL
FRKHKQDIVADP
>Dde_3070 extracellular solute-binding protein, family 3
MKRMLTAAVAAVLLLGLAAGAWADVRQELTRQSTIARAVDRGVLKVGFST
FVPWAMKDKQGEFIGFEVDVARRLAADLGLEVQFVPTKWSGIIPALLTGK
FDVIIGGMSVKPDRNISVNFTIPYDYAGMAVMAHKGKAAGFSRLEDFDRE
DVVVVARIGTTAASVAKKYFPAAQVRLFDDEAQAVQELLNGRAHAMVSSA
PLPAFTVLEHPDTLFMPVEGTFTREPVGFAVRKGDIDTLNVFNNWIRMVE
SEGWLKERKHYWFETKDWESRIK
>Dde_1773 putative PTS IIA-like nitrogen-regulatory protein PtsN
MKLGEYLDKDLIIHELSASTKTEVLAELVKPVIQKYPELDQNTVVRILQD
RENLGTTGIGDGIAIPHGKVEGLDHIVLVVGRSSEGLDFEALDYKLCNVF
FLVLAPEQVAGMHLRILAQISRLLKDKEFRAEFAQADSEDTLWELLQKA
>Dde_1583 putative signal transduction protein
MTQDLATQYKGQILAVKNLPTLPTALEEVSRLVEDPNSSTEQIARVIAYD
QVLSAKVLKMVNSPIYGFPGRISSVQHALVLLGFNVIRGLIISTSVFDDM
NKTMVGLWDHSVGCALACGEVARVLGFKDPEEYAVAGLLHDLGKVVTAVQ
LPQAKKALDVLVRTEDITYLEAEKRVLGFGHDRVNLWLGRHWNLPPNICE
AIAYHHKPLSAQNYTQFACVVHVGNFLTRVFEYGNGGDDNVPYMLPHAMK
LLKLNQRMLEQVLDALCAKFIEVADLKLG
>Dde_3465 putative PAS/PAC sensor protein
MQTAPAQQATVLTVEDDPVIRETIAAWLEDSGLTVLQAEDGSKGLDVFRR
HTPDLVLLDLGIPGMSGESLLKLMVQEQPDTPVIIVSGTAEIDAAISAFK
NGAWDFITKPVPNMELLEKTVRNCLERKSLRERLDAAETRYFQFIQHLPV
TVFSMDGSMQVTWLNAACPRVLGWPVAEALGTENWFMDNVHPPDRPALQQ
ALEAALQRGNDIFCEFSFRHRHGYLIRLQARSTSVSAPDAARAGRIEGVL
LDITDRDFLDKVLVQREKLNTLGAMADEVAHEFRNPLFALGGFARRLHTR
MPDIMEAGIILEEAKRMETMLDRLKEYTSPVDVSPEPTNVNTSVNFALDR
LEPQIARRRAAVSSNLEAGMPEIQSDPDILLQVLMNLVTNLLDAMPEGET
LRLITSQSAGTQEVTLMAPVQGTPMADPEQLLLPFDVSGPQRNLAVSYRL
VKTIGGLLSVTRSHNVHTLTLSLPAGHDSRVPGTGAGAS
>Dde_1346 conserved hypothetical protein
MRTFFAADCGNEIFAACKGVQEGAMQIDGSSVGYVLQTGSAHQVSKRQYG
SADSITGFYGQGDRVTISDEAWRLLEEQKAAALENSKHVRGIKEEEGETV
ESIKARAAAQEGEEAASSGSVSGNGGIEQIEKLKKQIEELQARIAEITSS
PVSDEQKMQQIAPLQAQVQSLEQQLMALQASLK
>Dde_1575 CheW protein
MVKTPEEYFQEQDFGTDSKVEDRRFTDAERAFMQKYLGMDEQDVLQRMGR
EQEPDAVMTLAPPQSAPAAEPATQGHDAQPASGLLHEELEDQLKTLEEVQ
MVSFYLGEQEFTVPIMAVQEVIRFMQPTKLPAAPRFIAGMVNLRGRVTPL
VYLRDLLGIVAREGDDGRFIVICKRKGLQVGLIIDRVHTMYRVPQRTIDW
NIESRLGTSVDFVSGLMNSNERLVSIISVDRIVARVLQS
>Dde_1200 putative transcriptional regulator, Crp/Fnr family
MDSTKNDNRSREALFSIEGVNREWAAVLDLGVCSSLPRGYELTSIDPSDF
YLLVSGSLKLSCLAEDGHERVVMIIGAGTLFGEIAHLHLSALHQHSLRTL
EPCEVARFPMKLLEDENFYRSHPHLIRSLVHSLGIKAGAFFAQLFDSGLV
EVDGRVCRWLYQQWKQHGCRRVCSPGLSQGDAAAMLGIHRSSLCRVIREL
RQAGIVGKFSRRTLEINDPQALAGRACSGRHMT
>Dde_0384 response regulator receiver domain protein (CheY-like)
MPYDPNMRVLVVDDFSTMRRIIKNILRQLGFNNVVEADDGTTAWDVLNKD
KIDFIISDWNMPQMTGIDLLRKVRSSEEFADLPFLMVTAEAQQENIIEAV
QAKVSNYIVKPFTAETMKQKIDKIFP
>Dde_0696 periplasmic sensor signal transduction histidine kinase
MQKTNAMGHKLAIWVSAFVLLFVSLTLALTYTLVSHGLEAAYARRSSQYL
SSIVRQHSIQIDSFLRERRANLAFLGKSRTVDELRSHGHLEWLLWRLNGQ
YENAFEDLSLISPQGEVTAYAGHEGLLGSNVFEARWFQRAIAKPSYVGDV
VAMPDGSPKLVVTLRLGSAKEPWLISATLRMQLMADLVRSAAQFTEGDVA
VINRAGVPQSGLNASQEQGRPVSAMADKLFAMHAASGSAVTTYEQNGDLY
AFADLNEGRWLLVSRTPNAAIQQPFAAPKKQLLDKLILLALLLIGGAAMF
VHYVTRQTRRLAAEKDSLNTQVIEANRLGALGELAAGVAHEINNPLAIIR
EESGWIEDVLDDGFDNPEALEGEIRRSVTQINTQTLRCRDITHKLLSFAR
RSTGHEACVDVNMLLQEIVGFAEQRARYINVTTRMRLDPALPMLSASPSE
LQQVFINLVNNALDAMEDRRDGTLTVTSRLQGNTAVITVSDTGQGIPDTL
LNKIFDPFFTTKSVGKGNGLGLSICHGLVTRAGGDIRVQSELHKGTTFTV
ELPVTPCSAEPTGNADRSIS
>Dde_0878 periplasmic sensor signal transduction histidine kinase
MAVRGASFAAEAQSEKSLPAITKGGSSGHAMHIHKPTSLQAKFLSGLAVA
CLTLGVLFAGGFYIHMRNVLEEEVRDKARLIFTHVDSIQNYVRQVLRPTM
YEQLPDTFVIQAMSSSFVSRSVMSRLNNGPDGTIYRRVAIDARNPEYEAN
ERELELIDYFRGHPESGIWRGYKNINGDRYYVMARPVRFVESCMYCHGEP
ADAPADLVRMYGNRGFGKEQDSIAGVDFVGLSVDGSVGRLQRTILTYFVF
FTVGAVIFFSTTNLLFKVLVVNNLKRLTNVFRRNVADAEGSALLRKLEQG
DEIEELVEGMEQMGEHLYEARSQLQLYAENLRGMVDQRTQALSREVEARR
ADVALFVSLLSDMRSSTSRADLWQLALPQICRRFRARRIAYVCTMASQNY
FSWPENMGRPELPDDLVGVLTSGACVVLGNKAYIPVESSVGNAEGILCLF
WDTDAEANTHDRAVLQALGRQLGTVAENMTAIDSLMRQMNVLQTIVEGIT
DPLALMDSNCAVLTVNEAARKLTAELTGGRRSDGNLLPLFFGAELDHCPM
VDAIKRGTPDLREETLPCGRSFSLSMYPVRAKDGTTGRVVVYVRETTMEK
RMMVQVRQSEKMATVGKLTAGLAHEINNPLGVILCYAELLRQNISDPQQG
ADLDVIVRHTRQAQRVLRDLLNFARPKAAGSGLADACAVAGSVTEVFSVQ
AMKKGVTLSLQCPSDLPRVRIGLNELEQVLGNLVINALDACPDADGEVLV
RISPRSGGMIAIEVADNGPGILPDDMSHVFDPFFSTKETNAGTGLGLTVV
YGMITDVGGTVEAGASAELGGALFTVLLPAEDGPETDGAA
>Dde_2456 putative PAS/PAC sensor protein
MNNETPFSQANLKARLRSLEEQARFTLDVLEMASTLGDFQTSINKLHEPS
SLLREAMERVEELVRFSATAFYLVDESSSDFSLALCAPDTYGAMVDDELE
HLIETGVFALALRENRPITVYSRDNNHRLVLHALATSSRTRGMFVGIMPR
SERNLSGILLSLLSITLKHCANAIESFELYRLFRENEALQRARLDQLPVG
IVDAAPDGAILSATGALMQQFGFAAETSLSSLTLADLLCPASQKQLQEAM
QNLLASGETGSPPQIPHRRLSLTSRETSQGAFPVVLHLTLQHDASGSFFR
AVLA
>Dde_1650 methyl-accepting chemotaxis sensory transducer
MSLRFKMAGFCLLIGLFPLLFMGVFSVNTASESLRGKARSQLESVREIQG
KAVSGVIATWRQETVMYSKVKEVYNAIGMLRDYTIGLAEEGLPMPVDTPE
YEDLYTYVKAAFTPYVEVLGYEDALLIDDHGRVLFSVQRGDDLGADLRSG
QFSATNLAQAWRKAVAGETAFADVAPYAPSGGRPAAFFAAPVYSYTGDIL
GVAALRLPLGNITGLMEQQYGTGCTGDSYLVGPDLHMRSDSRQDPEKHAL
QTSFGAGREGQVDNRAVQDALQGISGITSGDGLSGGRSVMAYQPVQAAGV
TWALITSVSEKEAFAAVSELRFIAGMAGAVTTVVVILLTFVFLRRELLAP
LGAMRSYVQNVAGGALQARMETEGVRFRAEIGQLSQGILQMVSQLKEKLG
FASGVLSGIVVPCVVVDTRNVISFVNPQLLALLELEGEGCVYCGKPASLV
LQHGKDGRGTTSWCIESGETVTNVEREWRTEKGNMRHVRIDAAPLHDLDG
RVIGAIALVADLTDIKSKEYHISLQNETMHEVAGRADSIAAGISGEVAEL
SHRVKNVSSGARTQVMRLEEAAESVGRMNNALQESAGYAREAVAGAETAV
ARAEEGARIVTSSEEAMHRVSSMSSTLRESMHELGQQAQAIGGVLDVIRD
IADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAERTMSATNDVRRS
VQTIQKAADENMAHTEAAAGAVEETEQLVAESGEALRVIARLAVNMGGQI
EQIARFAEEHTRANEGIIQTVDEISRIARQTEEGMDESARSVEGLRGNAS
ALQGIIEELRRS
>Dde_3114 metal dependent phosphohydrolase
MSPAHIATSADDELIFAEEEPVQESAAADAHWTLLIVDDEEDVHTTTRLV
LEDFTFDGIPLRCISAYTGAQAMEILRTEKDIAVVLLDVVMESNHAGLHV
ARAIREELDNRLVRIILRTGQPGQAPERKVIISYDINDYKHKAELTSQRL
FTTVYTALRSYRDLRVIEQNRQGLRHIIDASADLFRIRSIRQLAQGVLTQ
LSSLYGLFSGSVYVQTSGFTATSENHESLQFIAATGKYDALQTDEGCPQL
SSDVRAAVQQAVEEKRSIFNGRDYVGYFPARNGREHLIYLEGLSGVTPPD
ENLLQVFTNNVAVAFDNVYLNKEIINTQKEVILRLGDVVESRSKETAHHV
RRVAEFTRLLARAAGLGEETAELYLHASPMHDVGKIGIPDAILLKPGRLT
DEEREVMKTHTTIGYHILNTSERPIMQAAAIIAHEHHERWDGTGYPQGLK
GDGIHIAGRITCLADIFDALSSKRVYKEAWPQEKVLDYIQAEKGRIFDPA
LVDALFANMEEIDRIRDRYQDAH
>Dde_2687 PAS/PAC sensor signal transduction histidine kinase
MPAETHFAPARRSTLPELARQRRLFADETLVTLLDSVTDIVVILNDTRQI
VFANRNLLSLLGEKTADRVIGMRPGELFSCEHACCTAAGCGTSPACHSCE
AVHAILCGLSGRRREAECRITKREDEVLVAYDLKICASPLTVHDEHFVLF
AIHDISDEKRRRALERIFFHDILNTAGGLQNLAQMILEEVPLDLKGESLL
MHRFSKELVDEIMAQRLLLAAESDELSIRPARLCLAELMSDVLESVQQME
MAQGVHFDVQAPAESLMIESDQTLLRRVMLNMLKNAMEASPQDGCVAVGC
CPADGGAEFYTRNDCVIPEAHRWLVFQRSFSTKGTGRGLGTYSMKLLTNN
YLKGSVGFESREGEGTTFRLWLPAVLS
>Dde_2518 diguanylate cyclase (GGDEF domain)
MTALLPFQMRLFFMKKHFFPVIMGLVSLIAFVAAMAGFDFTTASEYAAQF
SRQQALQVRVATNAIEDQLDMISASGASLAGHARFAIDYGATYQAKLLSA
HITRQPNILAYVLMDTPHSLKSVELASVPLSMEAAAYAQEWITQNWSNAP
EQLAGNLLKAPLHITPEHQLAGLLYPFSDGKKLLGMSATVVSLTRIIKRY
VADLHVDNIGQGYLLADDGTLLFDPDSNNIGKNIFTHIYENAPERMHVFR
EVLAARSGSGIFDFPDTENSKAQQMLLAWDTVDFAGRRLKVCLAVSGDTV
NEVMQRQARWRIAAGVLFLVGLVLASTLIIYRSGLAKVRENEERLQMALT
GNQDGLWDWNIPDGRVYYSPRWKEIMGLETDQQLSSPEEWSSRIHRADKE
EVTAHLQEHLRGGVPYFQTEHRAVRADGAVIWVLERGAVISHDREGKPAR
LVGTTTDVTARRQAMMERDMLFRNSIDLLAITDVEGNILEANPAWENMLG
WTAEELRLPPCFDYVHPDDVPKAAENFALLMKGIPVRAHEGRFLKKEGSW
IWLSWNVLPDMQHRRIYVTARDISRQKAHERRLHEQASTDELTGIFNRRR
VLDIGKAEMARSRRFGRPLACLMIDIDHFKQINDTYGHVAGDAVLRGVTA
TLSAGLRQSDTLGRLGGEEFIVFMPETDAEGAMHTAERLRQAVEQSSVLM
DGEGASPGITVSLGVTVLAPETASLDAFIAAADAALYRAKENGRNRVEFQ
K
>Dde_0048 hypothetical protein
MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSI
GITLLYVAPPRRYKSIGPYGLVMGEAGIDEKEFHRHLALGNESLEQARTM
LLQAGVHEQRIRLCAVPDSVSMDWDILHQGTTGGHAAIVLGNRGRTWLEN
MLEDTPDITSEMVKQSCVVPLWLCPPQARDSKEVLICVDGSASAFNAVHH
IASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIMEGQGIAAHRI
STNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKL
FRRLRSSALCLCC
>Dde_2457 metal dependent phosphohydrolase
MTTESIAVLVIDDDPAILQNIVCYLEDSDFICFGAADGAAGIETFERERP
DAVIVDLNMPGMNGRDVIARINAQSPTTPVIVVSGTGVIDEAVESMRVGA
WDFLSKPVRRMEELENAVRAGLRRARTMRESNEYKETLERMVKRRTRELQ
LANDRTEAILLATVQSLSTVINLKDAYTGTHQQRVALIAPAIAEELGMEQ
RAVEAVRLAALLHDVGKMGLPSEFLTKPSRLDANEMQFIRQHPQLGYDIL
KDIPFELPIPEMVLQHHERLDGSGYPRGLAGDDILPEARILAVADTVEAI
CSHRPWRPAHPFSHALHELTAGKNTLYCPDAVNSCIDLITRGDPRLTTFT
ATIKGLPS
>Dde_0886 diguanylate cyclase (GGDEF domain)
MARSQSIASRIRFFSFLLVTLPLCVSLLTFAVVSRILVVGGAHHDMVVEL
QHHKLTTERWLNEQLQSITFFAHTGISDLHDTAALQQALRVFLNYHTSFS
QVFYASPDGSLLTGPELPVPINVGDRGYFQKARQGLPVVSPVLVSRFSHN
PSLIFCAPLPFADGRFAGAVIGVTDLRTLDEALLRLHRRQNDQSFLATAD
GYLLTSRLQENTIILPRYNPEGIPVTRTVLPPEDSLSTPHFYRNTQGVYV
LGVRLAFKSGQWLLVQERPVRAMLGGYSWIIAMTMAGALATAALLIPFLL
KAGRRITGPIEEISTMSEELTHGHYDKECPYLHTADMPPEIRRLYDNFCF
MAERVSQQMRDLEHLSFCDTLTGLHNRRHLAHEGTRTITACTEADLPCSC
LMLDIDFFKQVNDAWGHDAGDMVLQSVARTISNAVRSKDMTIRMGGEEFA
VIAPATDTASAFSLAERIRRNIESTPVQAADDEIRITISIGVADMGGAPI
FGTTQLDDLLAKADRALYQAKKKGRNRTEIWSEKLIAAAPDG
>Dde_1396 transcriptional regulator, Fis family
MWQDHFIAKASRRLGIPEPRLPYRHIRRLAAYHWPGNVRELQNIMERAVI
MADGGVISAEALPEALPRRREEAQPGALTRNEYGWQTEAPDRRVTVIREE
QWAHMQRENIRAALEACNGRIHGPDGAAHLLGVRPTTLQSRIKKFGIGRQ
DV
>Dde_2108 methyl-accepting chemotaxis sensory transducer
MSGTGKLVQESLQLLGDVRKKLNMLISSREHEFLALGENIMSLSDAVGGV
RQRSAELVELVSGEAIYSVINQLADDMGRLHELCSVGSESNLDELVRVRS
NLHELIRLIQSYARVVRTLQMLGISTRIESARLGTDGRGFNTLADDVEKL
AGKIVEYSGQIVQYAKNLDALADEASVRSQIMLGDQQTCALEAASGMTDR
VHLLQDAAQAAKERSEHVDALMSDIAASMGQIVSSLQFHDIVRQQVEHVD
EILESVSRMVIEKQEDSSPDEELVWIMDVARLQAMQLEHSRDSFSDAVGQ
LSAGLGQIASNVMHVAHTAVSGDSVAGSALDSISQTINDTAERMRGVAAQ
GGEMGETMSSVASTVADMAGFLEHIEDVGAEIELIALNASIKAAHTGDKG
KALGVLASSIQRLSQDAGNQTGVIAATLDTVSSSADSLKSQARSFHDATV
INETIGKLEEVTGSLRALGMQAENLASALSSEAGDIAESISSVVRGITFE
KTVGKELSAAQERLQGLVRRIEAAVPDAKSVRRPAQLDQMMNRYTMKQER
DIHLKAFGGQSDEADDDNIELF
>Dde_1713 hypothetical protein
MQVFPAFAADPKAPSGTGASARGDYTAFAAALHAAVEAPASSAQGGFNSA
FRSLSAVINGDSVVPDSLDTPFVPEKAAARANDLFSSVPASPDTLKDLRD
ALADLGVSEETLDKMMTQASASGGISWNQLMQMLQQDITSRTAFPAAEFD
APTRNAFQSLLQKLGFTDKEVGQLTEEVQAGNVFGSWQAITRKLDAAPDS
AVFSLDRSELQALGIAMRLPSDALKRLQSAMGNAESMTITRDGLKQALSE
ISGTISQVQDSIDNKVDQLRDIIRPAMNKALEDTTKAAQADNRQTKETGN
SLIIMRDTTQSKITERLQAEAHPSRGAAEAAAAAEKNRQGLRDIKTAENG
TADAASTDAVSGDGLQRAAKAVEGSSLSDNGREQQHGHEGSRDKESLHFR
NAAEQLIRHAEVRSAEPLLPGAQQQRVTPQELQQQAADKARSEKILEQVE
KGLIQTMRNGQNRMTLRLDPPELGRIAVTLSVVNKEVTAVIRPESPEAVK
AVNDQLHHLRASLERQGLKVERLEVQQQMQDTFSSPSWQGAEQHNETRQK
HQWQQREQRLAAIRREGSALAQEMQSPAHKARITTSSVDIIA
>Dde_2716 putative signal transduction protein
MPGRAGGCTRNTGAPVNRQDRAHAFLQRALEAQAALPVDHGLMRDLFAGT
GDDSRLSLSEVGELVSRDPSLAVRILSLANSAYYGLQAEVTTVGRAVTVL
GMREVRNLVLALGFSSVARMHPLPDRFCTAGYWLHQLRVAAFCRIIAAGT
EDLDPEMLYTAGLLHDIGKLFIAALAPDDWLGIRRLARQESLPDCKAEER
WWGLDHALAGARVLAYWQLPAALTEPISWHHGPHFADAAHARGAGAVQLA
DALLLAFERGTPPPAAALQLLKEYTADAGRLQMALEAQFAGERIGQLAAL
LG
>Dde_0395 extracellular solute-binding protein, family 3
MQTAIRKLKTVLVLLCAVLTGTAGVCAAQGLPDLAGRTVHAVTGNDYRPL
NFIDPQTGNGIGFEYDAVNEICRRLNCTVQWHVTSWDTMISAVRGGQYDV
GMDGITINDERRKQVEFTEPYLTSEQFMLVRADEQRFADAQTFRADERLL
IGSQPGTTNFYVAVYDVLDGDEANPRIKLFETFGPAVQALIHGDVDMVLM
DASSTRGYIGARPGKLKVVGGPLGSEQFGFIMTPGSDFVEPFNAAIGSMK
KDGTLDALSRRWFYEYR
>Dde_1260 two component transcriptional regulator, Fis family
MRVLIIDDDEHMRHALGRTVRRLGCEPVMAGMGGEGLQHAEKGDIDAVFL
DVRLPDGNGLSFLPRLAEAPSRPEVIIITGAGDPDGAELAITNGAWDYIE
KTASIQDITLTLRRALDFRRERMESRKDCPVRALRRKGIVGDSPALMRCL
DLVAQSAQTRANVLICGETGTGKELFARAIHENSMRSDGPFVVVDCAGLP
ENLVESILFGHNKGSFTGAEKDRTGLVQRAHGGTLFLDEVGELPLLMQKS
FLRVLQERTVRPLGSAEEVPCDFRLVAATNRDLEAMVQAGEFRNDLLFRL
RSILIDLPPLRDRKDDIPAISNNYLDRECARAGMDRKGCYADFFDVLTHY
SWPGNVRELLHALDHALAAAITEPYLFAWHLPPALRAKVARARVAAGPGS
TPPQASPPMAENAGAGLPLLQDYREAVLQQAESGYLRRLMAESGNCVRKA
VSTSGLSQSRLYALLKKHNITTS
>Dde_0391 response regulator receiver (CheY-like) modulated CheW protein
MSQTNILLEAGTNELEIVEFYLDEVTNNPDEPPYRGYYGVNVAKVLEIIR
MPKVTEMPEVQHRSVLGAFNLRNQIIPLVDLSMWLGKQRAGEEPPKVVVT
EFNNVTTAFQVSGVNRIHRISWEEVEPPNRYVASLSNNSITGVVKMEGRI
IFILDLERIVASMNPDLALKLDEAVDWEANTGYRALIADDSGLIREMLKD
LLQKAKFEVEAVNNGREAWDRLVELKAKGEEEGRPVTDYVQVLVTDIEMP
SMDGHNLCKRVKDDPALRMLPVILFSSLITDKLRHKGTSVGADDQISKPE
VTHLARRAQALIEAIGTE
>Dde_1631 response regulator receiver (CheY-like) modulated diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MTASDDLPGVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPD
LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQDVETFQRAKR
VNPFGYLAKPVAADTLHRSIEMAIHKKKLEQRLLESEARYRLIVESLNDG
LAILDAGYHIRYCNTKLVAMLQNTGAVALHAPFTSLLHPGSVSRFLLTAQ
SAATSGFASFGGNLQAVDDVALPVRVGVSCRKAEGNRQSEYVCVLTDVSE
LVASAAAQREAEAKYRTIFENAHEGIFQARADGRFLEVNPSMAALFGFPD
AATMLHEVPSLCALFATGAEQGEHCLPFLASQESVHGFQLQLMTRKGDTV
WVELSCHTVLDAAGNVNRLEGMIIDVTERRKHELHLLRLATKDDLTGVSN
RAAFRDMLKKSVEEVKESSICSALLYIDLNYFKKVNDKYGHYVGDMVLRE
VAARLSSRVRTADVIGRVGGDEFCVLLRGVGGVERAVSLAEDMRGVLDKP
FENLPEEHRLGMSIGVLLLQPPDVVDAGEAMRRADSAMYHAKTTGRGVVV
WEEGMLQSKAC
>Dde_2827 conserved hypothetical protein
MDKHLLVAVSEHRESSAGVRFACSLFNGSAGVRMTLLHVLGTAGQDAAAA
AAMQRRAADMLHGVRQWAEGQGVLPADIETLVLPRRYGVLRDIVDTARKG
LYDAVVVGGRYLSRLEQMYEDSVSRGLLWESVDFPVWICHQPDASRRNVL
LCLDGEEPSYRIADHAGFMLRDCAGHAFTLLHFNRARTAAEEVLERGRML
LEENGVGKDRIETLVMESSDHVESILNVADRGHYAVVAAGRNKRQPDSFF
NRLFTRSVTMRLRDNTQRFALWVSQ
>Dde_1627 methyl-accepting chemotaxis sensory transducer
MLRHMSIAMKLVLGFGGVLLLVGAVSLISLTGQRTLMTASETTGAVHGVM
EDMLRSRLQVVYYMMTADAGHAGNFKDTGEHINAALAALHAQALSEHETQ
RYIMLRQKYESYASVFAQYITAQKAYEEELARMIAVAQTLGKDLDKLQVV
SEHTPEAGTVSAGTAEDAVEKARVQGQVLAGFLRSRIAVLSFLQRQDPAL
LRDVYAALDDVLAGMHDLAAMSGSVQERKTVEALADSVTSYRSGVSVFEQ
VSRQQKEYGAAMTAVADEVAAIVKSVLEEQQASMDAQTAAARRMLLGMAA
GALLLGVLSAFFIIRSIRRGLGQAVQVADAVAVGDAGVVIDAGGSDEIGT
LMSAMQRMVDAQQQVADVAGHLAHGRLDVSVTPRSDKDALLLALRDMVDA
EHKVAGVADALAAGDLRVSLSLRSDEDRLFASLATMVNRFTAVVRDVQQS
AENVSAGSEELSATAEALSQGATEQAASVEQCSASTEQMAARIAQNAENA
KATECIAADAARDARESGKAVAETVAAMREIASKISIIEEIARQTNLLAL
NAAIEAARAGEQGKGFAVVASEVRKLAERSQAAAAEINGLSASSMEVAEK
AGELLSSLVPAIEKTSELVQEIAAASMEQSAGAEQVSEALHQLDQVVQQN
AAASEEVASTSEELAAQAGQLQQAVAFFQLDGGMAGVVSSGGTGSAAVVK
QVQAAPAKAAAPVRIRLDMEKAPQDDDREFERY
>Dde_0816 diguanylate cyclase (GGDEF domain)
MGYLSAGTTGRPRSGRRVCCRFAPVPVMTAVWLLSEAGQAAAFAGGLTAV
LPLGLAFTASGAAYAGWLAYRYAAERRELARRLDAALHHEAGLAERLRCA
EEEACRQRGIMEAAAAVEHETGLPNKRLYAVLLQKAWAYGRRNNVPVSLV
AVCMDYYPELLETKGSARAAECLHKLARVLGGACRRPMDVCAHLGGPEFA
LILPDTAADGAAVVVCRMRYELEKAGILNPRSGTGMYVTVSSGTATALPM
TEHSSEGLEQEAVARLHAARQLGGNGSVPGLQCPAR
>Dde_1577 CheA signal transduction histidine kinases
MSQDFMDPEIFADFILEAKEHLETIEPNLLELENSPDNLSLLNEIFRPMH
SLKGASGFLGLNRINSLAHKAENILDELRKGEMSVSSEIMDVILSATDAL
RQMIDNLDVTGQEGDVEIASIVEIIDAIMAGGGIAAPAPSASEEEQPREQ
QEDSSSDDDSADSSAAQSAAERVFVNLEPYALTAFGEGHLRDFVEEARDI
SENLNAGLLELETNPHAEGDLVNDLFRYFHNLKGNSGIIGFAELNSLTHE
AETLLNKVRKGEMPSSHALVDLLLVVVDYIDAMVERIDATTGVATPVRID
DLLERLQKAVTEGIIDAPARPAGQQTAAQPEAPQESAPAQQEPSSAVAPG
VDPDDLNVFRDTVSQQFESIRIALAELSKDSSQKDFVDALFRSLVTVQNS
CGYMGLEETKVYAERTAKLVDQARSSDLDFSLMTDLLEQECAILKDMVDA
QLTQLSSPAASTGADDAAEPAGDSPAARQAGKTEPPAAPVQKEKTAPAAA
PAAKPAPAPRPSAKPAPKPAAPKPAAPAKPAAAPQAGGAAQPPAGNDQQA
VHKGKSSSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEGETDVNVA
DVAQNLTETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKS
GKEVELIMEGEETELDKSVVEVIGDPLVHLIRNAMDHGVEPEEDRIAKGK
RPKGRVWLRAYHKGNSVAIEIEDDGKGIDPERMREVAVNKGIISPEEAKS
LDDREAMELIFAPGFSSAETITDISGRGVGMDVVRTNIKNLKGSVSIQSE
IGKGTRFILSLPLTLAIIDALMVNVSDETYAIPLDAVSETTKIEAERLTD
VNNRKAVTLRGEVLGIVTLSELLGLEGTTEDDEVLSVVVIHDNDRRLGLV
VDRLLERQEIVIKPLGEYLGDLRGISGATIMGDGSVVLILDPHEIYLMAT
SKAV
>Dde_1423 putative polar amino acid transport system substrate-binding proetin
MLHRLLFICCLLAAGVCLISSPAASRPVAELATLEWPPYSGSYLDRQGYA
SEVVRQAFAASGMDTRLHFFPWERAIRSMKHYGYSGYTPEYYSETRRDCL
FSAPFPAGPLFLFQLRGRNLHYTSLDDLRGLRIGTVSGYVNTDVFDSAEF
LLKDPAVDDVSNLRKLLAGRVDVIVGDALTLRFLLTRELGLPAGTIEPLE
PPLDNKSLHVCFNPQHPAAGDYISAFNKGLEQMRHNGTLKALHSRLYDAY
MPGM
>Dde_3742 extracellular solute-binding protein, family 3
MKIAFRYFPLAAVLMLALLLSACSEEKTDALSRIKEAGEISFAMSGGYPP
FNFYNDSNELTGFDVDVAKEVASRLGVAFVPVTTEWSGIIEGLRSGAYDG
ILGSMAVTPERLKVVNFSNAYYYSGAQVMVKDSAPYTAPQELKGKVFGVV
TGTTFAEDAEKLGAGEVRLYKDDTQTLLELDNGVVDAVITDRVVGVNAVN
SGRFNIRMLGAPLRSENIAVAFRKGEDTLLKEVNAVLAAMHEDGTLASLS
RKWLNADITTR
>Dde_0550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MGRTADEHSQKTGRSGAAQGCALAAALWEKEQLFRVLLEYSADCEIWIDA
CGVVRFVSPSFASITGYTPECLYRNPDYLAAIMVQSDLPAFRAQERILAE
RGGSFDVEVRIRTASGRECWVLCICRSITDDEGRPQGRRLTCRDVTRRRL
LAMQLQHQAGHDPLTGLPNRSLFLEKLDARVNGGRAARDGGASVVMIDVD
RFKQINDVLGHEAGDGVLRVVADRLRGILGGNDALCRLGGDEFCLLLAGG
GRAEEVLARVQQIQQRLMDSVDTGGRRLHLTVSVGVATHRPGQNAPEDMM
RNGGIALQHAKRAGGGGLEVFSDWMLESALNHARLEMELHHALKDNAFHL
EFQPLVDLHSGRPVRVEALARWDHPQRGAVSPADFIPVLEETGQILRLGS
WVLENACMAAARWQRRHPELRSVGVSVNLSARQLAQPALVDQVAAVLSRS
GLEPASLKLEVTETMLMDNPELSNLVLRRLKDLGVFLAIDDFGTGYSSLA
YLQSFPIDTLKIDKSFVMGMTSDPGKFNIVKAVTALAHSLGLDVVAEGVE
EQEQRIMLHAVGCEYAQGFLFARPVPEKDLAAQLGSLLRSSCDPA
>Dde_1932 LexA repressor
MGKAKTDEITPLQRKTLEAICRFVDAKGFPPTVKELSEIFEISPASAHDR
INQLVRKRYLKREGGKSRGIAVARRPSEMAASLVSVPVVGMVAAGRPILA
EENITGQVLVESDVVRSGQHFALRAVGDSMIGAGINDGDLIIVRQQPIAE
DGDIVVALLNNEATVKRLKIKDELIELVPENPEVRKIRIRPEDDLRVLGK
VVGWKRS
>Dde_2959 transcriptional regulator, Fis family
MELKTAGIIGQSSSLRDLFRVLAKVAPTDSTVLVTGESGTGKELLVRALH
MNSQRADKPFVPINCGAIPRELLESELFGHEKGAFTHAIRTRPGRFEVAD
GGTIFLDEIGEMDLTLQVKILRVLQEKEIERVGATATRKVDVRIVAATNR
DLETEVREGRFREDLYYRLNVIPLHLPPLRERGADILMLSEHFLCKFCRS
KGRTALRLDDGIRRILAAYPWPGNVRELENFMERLSILCDEDSVRPHDLP
RKILDAVGDVAQLPEVPEPAPAPAPQGFAWPRIEDMQQRGMDLKQFIDTV
EERLLLEALEKADGVKNQAAEILGVKRTTLIEKLKKRQLDK
>Dde_3782 multi-sensor signal transduction histidine kinase
MMKHYSIRHRLFIGSIILLFLALIPPFIYVGGLLKDDVLTESRLRARNGL
EMAAWLMEEQAPFSDTASMNAWAHRFGQRTGIRITYIENGRVVADSEIAY
EQLPTLDSHRNRPEVKAALVNGEGMEVRYSTTLGKDLIYMARTITVPDSG
LDGVLRIALPASVVNERLAELKEGLAAVFLLAMLASAGLAYLVTRSLVRS
IEDLAATAHAIGQGDYARKIRDYPGTELRPLVDAINDMAKNTRRQMQMLT
DQKGRLEAILDGITDGVMVLDEEGRIHSVNTALTDMFPQVAGMEGATPLE
ATMQPDLQKAVDAMLRSDTAHSGQPMPDTGRVCNVELSGGRYMEITLVPF
ADPAGTRKIVLAFHDVSEREQLEKVRRDFVANVSHELKTPLTSIKGYTEM
LIESPPAGREQNSMFLQTILKNANHMIKMVNSLLVLARAQHKREQTAMSA
VDAAAVIRQTVREMDPAAHEKNISIETQMPETPLMVTGDRDALCEVFRNL
LDNAVKYSPNNSAVTVSARITEGRAAFCIKDSGPGIPEASKERIFERFYR
LDRDGDTHKNGSAGLGLAICRRIVKSHGGEIWVESPLDSKTGSGAAFFVT
LDTASA
>Dde_2563 metal dependent phosphohydrolase
MVTTTHSELMEVLLGAQDLIAPVVAGHGRRVAMFSRMIAEVMDYTPQQLR
HIDHAAKLHDIGCFALSIQEKNDLHQFDVLSPQKHCAVGYLLLGRSSLFG
TLAPAVLHHHTHYDRRTGNGKDGPPVPHEAFIIHLADRIDILTDDRFSIL
QQRKAITEAITDGKGTLFHPHVVEAFCEAAYRESFWLRGVHGDRRGMEKQ
EDTRTLSREELLDFTRMLTLAIDYKSRFTATHSQGVAATCAAMGTMAGLQ
DDLTLIVAGHLHDLGKLIVPNEILEKKGPLDETERAIMNSHPFYTYSLLS
EAAGLARIAMIAGMHQEKLNGKGYPFHPEPDAFPMASRVLAVCDVFTALA
ENRPYRKGLPKSDVISIMRRMVSEGHLDPQCFAYLTAHYETLDELRRNAQ
QQAEKEYRGFWNRTEAVMESIA
>Dde_0569 diguanylate cyclase (GGDEF domain)
MLTGLRSIQLIGIYPCGRLYFTRPAYTECVLKQHLRIKLHQTLHSGTEKD
SDPELVRRTYMLNGFLLLSAFICALMAVLKHTESFTVLKGILWCSAGAYC
VLYFFLRTSGMLKVASDFALALTVTLGVLLIWRLNDQIAYILWLFALPPA
AFFTFGTKRAAVALGLLLIALLLSPFVSPAAMPPETFSLSYFVRVIAAFF
TLSLFSALGEYSRAHTQRTLVALTREMEQCACTDPLTGLLNRRGIYDRLN
EERARATRSGSTFSVILCDVDHFKNVNDCFGHQCGDHVLHQLAEHFRRSV
RGQDVVCRWGGEEFLFILPETDEQGALNLAEKLRSTVEQTPVNYHGMPID
ITLSLGVQECTLTESTEFHIRVADQKLYIAKEHGRNKVVSGNIEELMPQE
LIA
>Dde_2343 diguanylate phosphodiesterase (EAL domain)
MLLKHLRSLLSKSQGAVVQDDGVITTVSGVPVWVARQPVFTAQGGIWGYE
LLSRVCPENVCRPAEDAYVATSSVVFDGVEMVAPALAAGERLLINYSGEM
LVDGVPAMLPPDICVVEVLEDVQPTQEVLAALLRLRQAGYMVALDDYIGQ
EAAETLMPLADIVKVDVLGREREAIARDVARIRPYGCTLLAEKVEDRQMV
DLCAELGFDLFQGFFFSRPQLVAGKKLTSSETVKTRLLARMASGEYDMAE
LGDIIRIDAALSTRLLRYLNSAFFALPSPVVSVSQAAGLLGQEKLRRWLC
VAILSDMESSPLSRHVAVQAAQRGKFLELVCGTGCGRPASEMFMLGLLSM
LDGLLSVSMESVIAGMPLDEQLTDALLGRPGPLLPWLRFAAAYEKGDWQQ
AAELARRLGVSGEEVSRCYSEAISWAAVMFA
>Dde_3051 putative transcriptional regulator, Fis family
MLEDIYGHDLKQLVNFQRKIIDLCADALMVVNKEGRLIYINESFKELHGL
GEEVLGEPVSNIIDNTRLNIVAQTGIAEHDCLQEIENHSFIVSRIPFYED
GNCIGAVGMIRFRHVDEIQKLTENIKELKNEIERLRKSKKASDEAEYTFS
HIPGIAPAAREAKNKAMLAAPRNVTVLLRGESGVGKEVYSQSIHNFSQRC
DGPFIHLNCSAIAEHLIESELFGYEEGAFTGARKGGRRGMFEQADKGTIF
LDEIGDMPLAAQVKLLRVIQEGKVSRIGSEKITKVDVRIIAATNRNLEEM
VKEKTFREDLFYRLNVIPIKLPALRHAVEEIPILAKRIWKRMSRKNGMFH
KYLNSSALIALQEYPWPGNVRELQNFLERCMIMSRENDITAEIVNTVLQN
GVACDLMQPEDALELLPLAELVEKTELQAISRALSAANGNRSAAARRLGI
TRPLLYKKMIKYGLK
>Dde_1165 PAS/PAC sensor signal transduction histidine kinase
MMQDSRKKQPDLPPDSQGGEHPLRAGQAISSGAADAASGGSSAPQEDLQY
RDAVSSLIGLGEKSLRKSYYPELRRKIAELDVFRRMVDHASDAMLLLRTG
PPLAVTHLNSAARRLLGPGPEEGGSIDLAAQLGPRVEAALLASSKGGRSK
RLTLHVQQADGAELVLEASFSPMPSAEGDPGQVIMVARDVTAGFRAERSL
RESEERFRVVFEQSMQHVVVLSPEGLILRANQSLLSEFAISFDDLRGQRL
SDAPWLRNMPEMARNAESDVSSASAGVSVRRLYPVRLPSGQLFFDCSFKP
VRDDAGRIIHVVVEARDITALLEAENESRMLRGLLTNVVDSMPSVLAAVD
AAGRVIQWNREAERLTGTSAREAMGRPVEAMLPHVASLRSMVRYSMAEQR
PMAESKVPRTLPGGRVVYEDVTVYPLSTGHDQGAVIRIDDVSDKVLMEQT
MVQAEKMLSVGGLAAGMAHEINNPLGAVVQGLQNVFRRLDPAVDRNSTVA
AALGCDLHAMDAYMRERKIYRILEGMREASMRAADIVRNMLTFSRKSDMS
RSSCDLHAMMDSVISLAEADYDLKKHYDFKRIKLVRLYEPVPLIACNKTE
VEQVLLNLLRNAAQSFYAVGTIAGSGTKRVLLCHEPVITVRIRKAERYVY
VDVEDNGPGMPEDVTLRVFEPFFTTKAPGAGTGLGLSVSYFIITRNHKGT
MTVTSAPGRGSCFTVGLPHNGSTPE
>Dde_0575 CheW protein
MTEDTTAQCSQCSQYFTFVLDNELFALEIDSIREVLELPHITRIPRTPAF
MRGVINLRGHAVPVVDLRRKFAMPAVQDTVDTCIIIVEVMMDGELSIIGA
LADGVREVVDISPDAVEPAPRMGTAIQPEYIRGITRHDNAFVMLLDAERL
FSQAEMEMPPAAPL
>Dde_0697 response regulator receiver domain protein (CheY-like)
MFLEKKPISQILLLFTAPLLLLLVGLQGGVALYFSFDALQMALGRAVQTR
TMAVSYEISSYLQKVRYNALLLADFAATDEGLGGYLNRVGGLVESNAVEV
VVVLADGRRAHYVRSGEHASGVWRDSGEIGGRPDGYDFLSRDIKGLRVGE
VAVSRVVPARVLVQGPFESELTSMPVIRFSTPVKGPDGGVGGALSLLVAA
DHLGTILTYLQSDDSPLQSFQRRPARRFSYFADPRGWILYESASEQNKTC
QPVQSRQDVRGTLGLPGMAGAFLPSDEYRSFWSGIAGARKKEPSLTQHWE
HGDGLFFPTIMMEAGAPVLYRISDDAPPQVWGVAFSVDRSLLPHVLGSRQ
AAILCAVGVAVLAVSALVLYFVGRFCGAPLLRLARRVESAALQPSPEPVE
EVFRGYEVQTLQRAVNAMIRTMGLQAAEIEEKTRKLTHYANLQQVDFAEE
LSPAQEFEHSALGVLKGSSESIRRLKADIGRAAQVDADILIEGETGTGKQ
LTAEAVHKASRRCNGPLVPINCGALDENLLLDALFGHRKGAYSGAETDRD
GAFVHAHGGTLFLDEIQSASSKVQQALLRAIASRRIRPLGADAEYAVDVR
VICATNVDLQEEIAAGRFRQDLYYRIKVLSLRTPPLREHLESIPALTAFF
LDRAREVLGLPHLALTKGAMQTLMQYSWPGNVRELENCILQAAVNAREGL
IHSADIPVGRAGEPAAGASQWRPFAAGQGHGADGERRDAGRASVPAGGQG
DEPFSATGQAMPEAPPARGPVRGGQVVPAGVKDAGLQGLNERQIKALEHL
RTHRSMTRREYMALFTYDISDRTAGRDLQGLFERGLVTRSGAGPATAYRL
AV
>Dde_1685 two component transcriptional regulator, Fis family
MIKRLLVIDDEPGHRLMVRAVMEDNGWQVFEAASGEDGLSFLGTDSVHVV
LLDMRMPGMDGKETLARILDINPQLPVVMLTAYGTVGSAVEAMKKGAFDY
LSKPADNDELAAVLEKAWEYSLLLAENQNLRQKLGQGDPVQKIVGSSPAM
LRVLDFIRQAGPSEATVLVMGESGTGKELIAEALHDASLRREKTLVKVNC
AALPGNLLESELFGYVKGAFTGAVKDKPGRFQLARGGTLFLDEIGEMPVE
LQAKLLRALQERVIEPLGSVRPVDVDVRIVAATNRDLRKAIEQGDFREDL
FFRLNVLEVVSPPLRERIDDIPLLVSRLVDKLSRKNRKEVRSVSPEFLDA
LMAYHWPGNVRELENVLERALILSRSDILGPESLPAQLLQVEERRDPLPQ
RMVSTALVPSFDDAERETLLKALEAHNGHREKTADALGISRRTLQYKLKK
FGLTRRS
>Dde_2455 metal dependent phosphohydrolase
MPLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVN
VSLLQSGMILSEDVTDSNGRKLLCAGDAITEKHLRILKIWGVAEVDVEGI
EPADAARSALDGLDPLRVEAAAARATARFALNDLQYEPVCMLMQCSVAAL
AKGADPVAPLPDYSVLPAAPMPSAPPALADMLRDDTRLGSLPPVFHRLVD
VVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAKVDTITRAVTI
IGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLH
RMPNTERFFVAGLLHDIGRLAVYRLLPEHSLYMLTESRRRGISMRAMERE
VLGFSHDRLGGRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADI
LAHTLEFGTSGEVLVPRLEQAVWDALALPAGTLEQAAAQMDYQVHEIIRF
FELDE
>Dde_1755 methyl-accepting chemotaxis sensory transducer
MIRRVTISSRIWFLCALLFLVPSVILFMYWNSASKLADISKTEFRNAIEQ
GERHKIEIATSVLAESLAVALQDVTDPARQAVVVQNALDKIRFEQDSSGY
FYAYRGTVCVAHATSPALINKDLSGLKAADGTYIIRSLFRLAQNGGGVMA
FPWEKPGEGMQDKIGTARFIPGTDIWIGTGVYLSNIAKAETALQQTLTRS
IRPLLVTTIGALAAAGLLGILPLCFIITRSILTPLREAVQGAGRIADGSL
DVQLKDDGNDELAALMRALNTMTRNLAETHVRLETALEEAREESRKAGTA
RSEAEESKAQVERSYGELLATAGVLEETVTAATDAMNAVQNNMQSLRKNS
AAQQGQMAEIEQTAESLSRASRLIGSLSEETMTQGEAEKAAAAKGVDRVT
ASVESIRAIQTQAGLLSEEMAALEDHAGSITKVLHVISDIADQTNLLALN
AAIEAARAGDAGRGFAVVADEVRKLAEKTMTATQEVGQIISGIQQSARTN
AQSMLTMAESVSSAARQAEDSGHDLKQIAAGVETAFVRSESIFRAAESQN
REVENVTQALAAMDGVIGESDLSVQSTDSAVGNLLAEMNKLQTVIADLHR
HTRKR
>Dde_0820 two component transcriptional regulator, Fis family
MANVMIVDRQSDFIRNMERTLLSEGHTLSIAGSVTECLDRCRFRPCDLVI
LEDRLAAECHNSVASFRRLAPAPEVVVVTGRGDPLLGEIALLEGALNYLE
KQNAPAAIRSLLTRLGQNSILSGNGAGTAARFGIVGESARIISCYNLIMR
SRASDVSVLLEGETGTGKELFAKAIHKLSPRVDGQLVTVDCASLPETLVE
SLLFGYSRGAFTGADGNRVGLVKRADGGTLFLDEVGELPLSVQKKFLRVL
QERRFRPVGGGNEISSDFRLIAATNRNLQEMVDQGLFRSDLLYRLRTLKI
TLPPLRDRGEDVVLIAGHVIKEQCRRAGIPCKRLSGEFLEKLRGYHWPGN
VRELVNMVESAFAMAWDDEVLHTEHLPPQLHARLVRSYYSSRGLAQGDNS
CSMSPAAQAVTVQVPVRPVAEPAVSADRPPADVSGCSGGHGCNETSLQHS
PASFEEFEAMGSLRDARRLVTERFERDYLRALRAATGHDVKKACAVSGLS
RARLYELYRKHGILG
>Dde_0327 response regulator receiver domain protein (CheY-like)
MSEKVLIVDDEQEFLDALAERMRARGMDVTTATSPIEALALVARRSFDAI
VLDFQMPELDGLETLKRMKDANDDVQVIVLTGHATVERGVEVMKHGAMDF
VEKSADINSLTEKIQEASAKKLVIAEEKTREKIQAILEEKGW
>Dde_1571 response regulator receiver domain protein (CheY-like)
MIKVVVVDDSAFMRKALSSMLEKDPGISVVATARNGEEGLEQIRKHDPDV
VTLDIEMPRMDGLTALRHIMMEMPRPVLMVSSLTVEGAEATLKAMELGAV
DFIPKQLSTVSLDIVKIEKDLQEKVKAISRRRVPGRSFRPAPAVRPAAPA
ALRATPRPSAAPSSAASSTGTLQVAGGKPVRDVVAIGVSTGGPPAVQKVL
SRLPQDFPVGIVIAQHMPAAFTGPFAKRLDGVCAIAVKEAEDGEMLMPGK
AYIAPGGKHVRVRNTRGRLTLEVSAEPAEALYKPSANELMESAGLALGRR
SLGVILTGMGSDGLEGIKVLKQKGGHALAQSDSTCVVYGMPKAIVDAGLA
DSVVDIDDMAQAIMNAVYK
>Dde_1694 response regulator receiver domain protein (CheY-like)
MKFLIVDDDFDSRRLVQKILHPFGYVDVATDGEEGVEAFRTALKDGEPYS
LITLDILMPNIDGQQALREIREIEKEMGVSAENAVKVIMISGLDDSKELH
DAFFLGEATSYIVKPIRRQLLLDEITSLGIELDQAVA
>Dde_3703 Glycine cleavage system regulatory protein-like
MNKVVVSIIGRDRPGIVNTVAQRLHELDCDIVEVSQTILEGAFAALFIAG
LPERLTVEALRDALTTHMAWQGLGCFIREHEAGAGAAQQSDPFVVTLDGP
DSKGLVSGITGVMSGCGVNIENLKAIKRQNTGNALIMFEISVPHSVNNAE
FRTALEHKAAELGVRVSLQHRDIFEAIHRVLPV
>Dde_2148 chemotaxis protein CheZ, putative
MRTQEAILEQVMQNVTAQVADSIKDAIAQTIQNELTTNLTRALLEGEFYK
KLNSDMRSGLQNIYQEISHAAKDKSVAPPSEAQTDKLFSEASEQLDEILT
TTEQATDDIMDVVEQQLERQAEASALLDALEKEAPGDSITQLRAINSELA
DNLTTILTALSFQDITGQRIKKIITALQRIESTVFELYMSTGLIMKAYSE
TPDKEIEELEQEARQKMSELKGPTRDVSQSDIDDMLAQLGMD
>Dde_3561 methyl-accepting chemotaxis sensory transducer
MALSAKNKIVLSVLSFFALVIIAMAAVSYQRFSESSNKAQHIKLETVATA
VGKAVSEKTDTYFNALELAARMLAPVLSPHTPDDMEYRLSVLHALMLQTN
VSEAYYGLRDGLTYTAKGQIRNFNAKDLGREWYVRIFNGEKRIITTPYTS
SIGELVMAAGVPITKDGAVAGTLCANLAMNEITSFTRQVLDFKNVLLIRR
DGFIMAAPDEKDIGKSLWDVIPDLKRYQGTTGTSRLSFTHGGQTYEGSLY
YIDSLNWKVLAFESTAAIEKDSKENLYLTIGMAVTALLLSVLMVNLLASF
LIFRPLGRGVAFAAAVSEGRLDETLDINRSDEVGVLAEALRTMVARLKEM
ITETEQKERAATQEAERARKATEQAEEARREALQATRRGILQATSQIEGV
VKRIATNTEELSAQARQISSASDIQKARMTETAAAMEQMNASVMEVARNS
GEAASNASAAHREAGRSAELVDKVAAAVNFLHKETQVMTTDLTELGAQAD
GIGMIMDVINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEK
TIGATKEVGDKIHAIQNSSRKSIRSMESASDAVEDAATLAGESGEAIKRI
LAYAEANATQVQSIATAAEEQSAASEQINQAVDEVAHITAETTQSMAEST
AALEELAKMSGELQVIVENLKKS
>Dde_2764 extracellular solute-binding protein, family 3
MRMAKIVALAVAMTMFVASAAFAGPVYDKIMQTKKVRVGIMTDSIPGAFY
NEKGEWVGFDYDIATEVAKRMGVEIDRVAVNNQTRISFLQQGRIDISVAN
MTHTRERDKSIDFSITYFFDGQKVLAKKGQFTSLNDMVGKKIATMQGTTS
ELNLKAALKAAGDPDYDKNVISYQKESQCFQALQSGRVAGWSTDATILLG
YASKTPGAYELVGDFLSDEPYGMGLPQDDSALRDAVNMAIQDMWRDGTYM
EIYNKWYGPGTPFEMPMSDQIELWP
>Dde_1351 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MFFDASHSGFSRKSLPRFALWFAAASCVVMAIAVVVSHRVATQALQRHEG
LFSRQQLRMTLLSAQAMQGYFSSVAGHLRIARPPAPVPDEALFTAPSGSL
SHLFDKHPSLVAVCFGTQTGADAGIFVIRPQASAALRGQARLWLRQAVLH
PVRCPPPDGWWFAPVFVEHKSVVAVQVCTADAAQAPVVAVFDMHGLALRY
AGQLGIGDSGSGFVLDERGTVLFHAGSPVAGRNVFDGMHAGFPALEQLDS
RMVQEPSGAGGYEYATRRSGGTVRKMVAWNTVELPPHRLVVGLAAAVQDI
NADMYALNRQQGLLAVTAFLFFALMALGFLREQRTRALRRSAELYRQLAD
TAYDIELWHDAEGKLLYVSPSCERITGYPAADFMADAGLLERVVHREDLP
AFRMHMSAPGMLEGESLEYRLLHRTGKVRWVSVVAREIWTSDGICQGVRS
SVRDVTESKLMEKELDYKSQHDELTGVANRSLCLARIRKAMVRTAPRPEV
GFAVLFLDIDRFKIINDSLGHEQGDMVLAEMAERLVASVRPCDTVARFGG
DEFVIVLEELPGPREAVRMARLIKKRFKEPLLLEGHEMRITCSIGMIFEY
GGDSVGAQAAVRNANIAMYRAKAAGRDKLKVFRPKMLAAAASVMTLENDM
RSGLQRDEFFMEYQPVQRSDDGTLTGFEALIRWRHPEKGIIGPDHFIPLA
EESGLIVDIGLSALRKSCCEMARWCRRYPGCEELFLAVNLSARQFSQPDL
VTCVSGILQDSGLDPRQLKLEITESTIMSNAETALAMMHRLKQIGVQLAI
DDFGTGYSSLAYLQKLPVDTLKVDRMFVSAMEEQAGCLEIVRSIIVLANS
LQLNTVAEGVENSRQLEMLRNLGCSYVQGFYFHKPLPVAAAELLLNGREP
AEAV
>Dde_1719 anti-anti-sigma regulatory factor, SpoIIAA
MGGLSVEQQGDILHLGVDGELTQQVVPAIRKQCDKLLEIGVFTHLVVDLS
GVPFIDSSGIGLLVSINSRLKGGGKHMLLYRPSDQAVKTLDLVQLLDFFT
IIHTEDELLTVVGS
>Dde_3740 transcriptional regulator, LuxR family
MNKNDHNTPPVCAPGDVVEAWDDVILYTDAAGTVTAGNGKALHYLPQSGR
AGAPFWQTLRLGTQSLQQTLHRFAPMQIHEISGTHGERFLLRIIPVHPSL
SSRGGFVVVATDNRPLEALHETYEERLGDNISAWADSITLFNALFDTAKD
ATFLINEQGIILTANPAAGTRHAPSGGELAGNPAETLAGASFRPRLHNAM
QTLRPRTVWAEKIVALDAQGEGYPAEAILRKMEFSGYSLFQLILHDLSAQ
VELKKDLQAQKAEVEKMNIALRQVIRTVEEERQEIREQLTSQVKKQLLPA
LERITKAETPEVREGYRNVIQEQLNGLTDTAGVEDADLLRLSPREMEVCQ
LIQLGRNGQEIAALLNMSFETVQTHRKNIRRKLGLKGRTVSLFSYLRRKP
ALS
>Dde_0227 carbon starvation protein A, putative
MLYFFLAVAALLVGYAVYSKVVERAFGADECRATPACTMEDGVDYVKMDP
KKIWLIQLLNIAGLGPIFGPILGALYGPAALLWIVIGSIFAGAVHDYFAG
MMSVRYSGKSIPDAVGYNLGSFAKHFMNVFAVILLLLVGVVFVLGPAKLL
AVKLGFGLEGDGAVATATMIWTGIIFCYYFIATVLPVDKIIGRLYPLFAV
VLLIMAFGLTIMLIAKGYEFYPQGLTLENLHPKNLPMWPLMFITIACGAI
SGFHATQSPLMARCVPDEKCGRPIFYGAMIGEGIIALIWATLGMSFFHTP
GELQAVLDNGGPAAVVDTVSMTLMGPIGGFLAIIGVVVLPITSGDTAFRS
ARLIIADFIKLPQKAPVKRLFIAVPLFAVGYAITLTPFAVIWRYFGFSNQ
LLATIVLWAGAMYLVRHGKAHWMASIPATFMTAVCATYLAYAKIGFGLSM
DIAQVFGIAVAVLCAGFFLVKIRSVPVEPDAADGPGRIG
>Dde_0535 multi-sensor signal transduction histidine kinase
MKPALLGNHAPRGVILALQLIVLALLSGLFVTVYSQKDNHLSLARIKLQS
QATILGDRLAATLGGIDLVLLNAQNTAAQLLTAHAAAPSETIRRLHLPNS
ALLHPGVADIFLFDAQGTLVARHSGDRYSKPPDVTGLLKRHRDQWHDFFL
ELQAEDSAAAAEHKPGILISRRMLDASGAFAGVLTASVYPAALYDPYQES
SFFDIDTVLLLNHDMQIIACWPARADLHSGTALEETAVFAGTEDELSGGG
LREAQTAADLIAAYQLPHLPLHIAALRDKKRVLGPWHKSLMRTMLAALAL
LTLTAALAYTGMRQHHKRRNAEDALQQSEQLYRSLAENYPNGVLLLFDGQ
GIIRKADGRQMESMGLNKQHAEGRRPHEILPPAAGLNLAAHHAVALRGRP
VHFTLVIRGRIYMGHSLPFSCETHVSGGMTVLEDITELQQTQARLRESQT
MLSEAQRLARIGHFDMQFMTLRTYCSPELLQMAGLPRDFDVSKGSGLLEH
LAPAVPPIFMAMLQSPLHESISYKEAGIPYRAINGSAGFGMLRVKLIRDA
SGSPLRLSGTFQDITEEHNTRMALLQSEARYRALSANLPNAAVCLFDSEL
RLLIADGQRADMLGMSGDTPAGTRLSAVMPQALTVVLEPLCRQAVAGRRS
QMEMVHAERVHEVTAIPVPAHLGGYDGLLVILDITKRKATEAALKDALET
AEHAVRLKSQFVANISHELRTPLSGILGITDVMLGRPQPEETRSHLGMIR
SVAEALRLVVNDILDFSRLEAGKMPLHVRTFSLPDTVEQVLAPLRLAAAQ
KGLALTLRLDSALPEAVRGDAGRLSQILTNLAANAVKFTTKGFVRV
>Dde_1522 histidine kinase
MRHRMAECALPRVLAIDDESSVRQSLAIFFEDCGYEVLEASDGYEGIETA
LRERPDVILVDLRMPGIDGIEVLRRLSSELPDTPAIAVSGVGVLEQALEA
MRSGAWDFISKPVEDFEVLRKAVESARERADRKRRKRGYHQHLEREVAAR
TRELAMAKEEAELASRAKSQFLANMSHELRTPLNGIIGLTDLLLCAPAGG
DHREYLEMVKQAGQELLTIVNNLLDMSSIEACRLVLRETPFSLRESVGEV
KRILEIQARWKNLDFAVFFDDGIPDLFVGDAGRLKQILSNLLVNAIKYTD
KGGVSLRVSSAPCTAGDTVRLCFYVQDTGVGIDPEKRETIFEPFVLGESF
MTKKSGGAGLGLAISRELARKMGGDVHASRCAEGGSLFECIVELRKCEEE
APVAAEKTCPLARTSKPLRILLAEDDIINRKLAVFFFEKMGHAVRAVGTG
IEVLQALAQEPFDLILMDIQMPDMDGVEATRAIRSAQGGRIRSDIPIIAM
TAHAMKGDKERFLTAGMDGYVSKPVDFPALMQRIEALSQQQSKL
>Dde_2679 hypothetical protein
MKQRGDAVLVLGCGSMVREVGSRLGACGADVRLVEDEGAAVEVLLGAQPC
LVVLDFTSAAGQALRFYAALRTVSVSTVRTELPVAALMPESGTGAGEQVE
RAAPEGFVCVLQVPLTAAQLQDLCALYERISGGQQPPAACEPADDCMVMS
AVQIAEDFGLEPEDVTTLYRRMMITLPQELDKGYRAVTEGRLADVAGIAH
SMAGSFLDMVSYGPAQVARRIERQARSGGTADLEDLWCELDRQCRCVMRV
ISRRLE
>Dde_0849 periplasmic sensor signal transduction histidine kinase
MTLILSVFLGALLAAAFCVYTVRTAGMRRALTVIPAVGVTAAVAAAEGAL
QYLSVPAHGLLQPVLLLQGLLCPAWLLFGLAYARGFSWQGLSLLNRLLLF
ASFIPALLVVLFPVSRFLFLPDFTLEQVIYLEPLAFSLYLLIILFLLVAL
GNLEATLRNARHSDRWRVKLALVGGGTVLMAHVLFYSQGLLHRSIDMNYG
GLRTAGSMLGIAMLFFAELRRESGRVTVTGRFALRSTVVLLAGVYLIGLG
IAREGVRHFGSEFERHAAIGLLFLLGLAVVLVLLSERVRRRLRIWLQRNF
YQDKYDYRSQWMEFTRRLAGVRGMDELTRTVLLHYCEAFGFVGGAWFAAD
HETQGRVTAGEYYEMDEPQVMPESIDFSLIMELQAPVAIPVLKDRLAAAG
RMEEAGCLDFVRATRAEVVVPVAAGDSFEGLLLLGPAIDRSEAYDTEDFE
LMDAMAHEVGLTVKSFRLGNELAAAREMEAMGKVAAFVLHDLKNQVYTLS
LVTENARDFIGEPDFQADMLESLENTVTKMKVLITQLKHLPDAGSLRLAP
VDMHELVRKAALQVPGVRLVVQGPQLVAAVDEEQIEKVFVNLFLNAVEAG
GDRPVTVTTVQQPVFSVSVRDSAGGIDRDILRRGLFKPFRSTKRRGMGIG
LYHCKKIVEAHGAALHVRNRPGEGAEFVIEFAPQQEKPQSAGNGGAKGAS
V
>Dde_0802 hypothetical protein
MPYITSVLCRVLTILWFGAAVVLGPALQAAASGAVPPPPPPPSIKVPLPA
KDSIPFVVAVHPYPPYTEARDGSPEGMMVDIVKIAAHRAGMRVILRQEPL
DRIPALLRSGEVDAAFPLYRTAQRAELGTFCDTPVTNPETITIFTRRLSP
WQFTGSLRSLADTRVGIVRGHSYGPELDKALEQGVLRNVTIFADFTQCYM
ALLEDRLDIMPMDLLLGRELARRYGTLGSVVQLAVVEQVFPRIVFGPGEK
HARMAQQFCSGLDSIRQDGTARRIRGVFIGTYYGE
>Dde_1162 hypothetical protein
MITKILHALIAVLFVFPAAGLHAQETPATRTVTAGKGLQAYRETDGRAFI
SILVGEYPPYVYEDTDGNWTGIEMDIARAVAGRADITLVPVIQTNWRRNL
YHAERGLVGLIPSLPDTRNSHAHYHLLFRTVSLGTVLMMDKDAPPFSPAS
LADLTAGNRIWGYQEGVFYGPELNEALAGDLLFAGHFEPVAGFGLNRKKL
RGGRIHGYLDIGGRCGIPKHTKRIPLPFVSNADWYLAASDAVPEHLRRRM
RTAAQQLEQEGELERIRKTDYCKRMRSAAAAQNIP
>Dde_3074 methyl-accepting chemotaxis sensory transducer
MFSKISVKALALLTAAAGLAVPLCVAGWQYASAPSGDVRSLLLWGAVSTV
AAYCLVVVPLAVVLVRKVTRPVAEIQQRVEKILDGDYSVCFACDGGDELA
EMRLALDSLLSRLKYNLGFAQGVLKGIDTPFVVVDNDEVLTYTNPSLISL
LEQTGKPEDHYGQNVALFFYGDASRRTVLRDSLEHHTVTSREVDLTTRKG
NTRRIQIHASPLFDLSGGLMGALCIYQDLTDLRAREAEIVSKNESIAAAV
KSSETVSLTVSEIAGSVDQLIMQSARDAETQTERTVESASAMEQMNVAVL
DVARSASAAAEQAGIACDKARQGAGVVEEAMNAIDEVARLAEGLKVSMGD
LGRQAEGIGQVMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEV
RKLAEKTMQATSEVGAAITSIQAGTRNNVQNVEASVLAVQRSRELSSASG
DSLREIVDLVIRTTDQVQAIATASEEQSSTSEHISQAVDEVRIISENSAR
SLAEAAGMVHKLSAKAGELQRIISTVASS
>Dde_1270 putative transcriptional regulator, Fis family
MRKVIQHIESIFDVLSDGIYITDKSGKTLFVNKRYEQLTGLQMKDIKGLN
VSTLLEEGVFDIILNPEIVRTRRPATSVQNVRQSKKVILRGYPVFDDEGE
VCLVVTFARDITMITQFRDQIAQQRELIDSFNERMEHMAQEQTRHPRPVF
ESHAMKRVLELLQRVASTDATMLILGETGVGKDVIARLAHEYSPRDGKLF
MKVDCGSIAENLIESELFGYVPGAFSGASSKGKPGYFEIADGGTVFLDEI
GELPLPMQAKLLRVLQDREVMRVGATQPKEVNVRIIAATNRNLAKEVEEG
RFRSDLFYRLNVAVLRLPPLRERSDDILPLADTFLDRFNAKYHRTMTMTR
ATRHALGNYGWPGNVREMQNLIQSLVVTCDGRSIRPEHLPPHITRAGKST
PYTPPAPEDERPLKEIMADIEREILQEALKRHGSVCKVASMYKISRTTLF
RKLRDVQDGTHEDA
>Dde_2159 methyl-accepting chemotaxis sensory transducer
MLNKLSIRSIILFTVLLGPVVLTVLLAGQRLNDIKESSRQAILSQSRAIV
QLAEDTRNEMAHKLNDGILKPLDSLPADKVLSAVPVVTAMRIAQQSSQKA
NYTFRAPKISPRNPANEPTPAELKALSAMKRDNLNEYIITEPDRILYFRP
VRLTEECMYCHGEPKGTRDVTGGIKEGWKTGDIHGAFVVISSLDEANRDM
ARARMSVAGWAGGVLAVILSITWLMLKRRVISPLNNLQSITEEMAQGRFD
KTIRSTARDEFAMLTESLGKMQSRVAMTVQGVKVTASQVADGSRHLSESS
RSMSEGAVSQAASMEEISSSMEEMASNIKQNAQNARETETISLQAAQQAE
QGGTAVLRTVEAMKEIAQKITVIEEIARQTNLLALNAAIEAARAGEHGKG
FAVVAQEVRKLAERSGSSAAEINSLSASSLEVADSALAMLRKITPDIQKT
SGLVQEIAAACAEQNIGAEQINKAIQQLDAVVQQNAATSEQVASTSRQLA
AGADELQRNIDFFQVSEHSAGHGSDSAALSPVRQAGPGKKRSGRKNSGGQ
KKHAADEFTKF
>Dde_1569 metal dependent phosphohydrolase
MIRIQDILDTIAEYRQDADIALIQKAYVFSAAAHAGQTRLSGEPYLMHPL
AVAHSLAKMRLDEASIAAGLLHDTVEDTSTGIEEIDSLFGEEVADIVDGV
TKISQMTFESKEEAQAENIRKMVLAMAEDIRVLIVKLADRLHNMSTLDFQ
KPHKQKLIAQETMDIYAPLANRLGLHRIKLQLEDLSLRYLRPDVWSQLSD
WLEKKRVADSDYIDNVISLLRGMLDENDIPGKVKGRIKHINSIYRKMVHQ
NLALDEVPDVIAFRVIVDDVKNCYAMLGLVHAAWKPIHGRFKDYISMPKA
NMYQSLHTTVVGPGGERIEIQIRTEEMDRMAEHGVASHWLYKEGQRVKSK
DVRQFAWLREMLDWQKMESDSREFMRSLKFDLFKEEVYVFTPRGEVKELP
EGASPIDFAYLIHTKVGDHCSGAKVNGKLVPLSTKLHNGDTVEIITDANR
HPSRDWLRFVKTAKARTRINNYIRTEERSRSIALGREMLEKQGRRMGLNV
PKLLKEGGLMPVAEEFSYREVEELLSAVGYARLTPRKVLRKLLPKEEEPA
RQPEVKAPEPQKSRRESDSVSIKGVDDVLVRFGKCCNPVPGDAIVGYISR
GRGVTVHTSDCVNVQAMEPERLISVFWDGTEGKPYPARIHMLCHNEIGGF
AKITTLLAEEQVNIDACHMRSNVDGRSELDVTVEVRDVAHLYRTIDRLRH
LDAVIEVTRHSSHSE
>Dde_1059 PhoH-related protein
MGSKNFVLDTNVLIESPESILSLRNGEENNIFIPYHVLLELNSLKTNPRL
RHIVARVVDVLLEHRDIIKFIRNDSSVSPFTEEVVDNFILREVHDADIED
PILVTNDRILQLQAGMGGIRCEEYRDSRPFQSESQQFTGFTAEGEPPVPN
AFRWEEGRPVFNGPDGDEVISYMQDVWQVRPRSVYQNLALMLMLHDRIDL
VSVQSEAGYGKTYLALASALHLVLQHHRYNKIYVVKPTIELGAKMGFLPG
DIREKMEPYIRYIGDLLLKLHGVRPANRLFLNAGEAPLRFDPKRFEILPL
AYIRGMNIENAVVIIDETQNLSRSEVRALLTRMGGNVKCLCLGDTRQVDN
PYLNESNNGLNWIVRKFKGYSNYAHMVLKGERSRGPITDMVIKSKL
>Dde_1399 ATPase
MHYLKDIMNTHSPTTINDLDISPFFDLMLAMARERSVEALLDLTERAYRG
THVISGALWFAENSPESPRGKMLRLMAHSGWTRHTPREWRHDEGTYTLVP
LTEPVIGECARTAKPMFAEDSAQWERPAWAENEGIHAYATYPLIFKSEML
GVMAVFYDRPMQDRLSDVMRMHRKMHTIFADSLAAALANARAFEEIQRLR
RELEMENEYLRRAVSTANNLGDDIVGESPSLKKVMEQIEVVAPTDATVLL
LGESGTGKELLAQAIHANSQRRDKPLIRVNCSAIPRELFESEFFGHVKGS
FTGAVRDRTGRFQLADGGTLFLDEVGEIPLELQGKLLRVLQEGTFERVGD
EQSRKVDVRIVAATNKDLLEEVRKGTFRQDLYFRLSVFPIHNPPLRERPE
DIPLLARHFDPATKLWTQS
>Dde_0221 response regulator receiver domain protein (CheY-like)
MSKRILVVDCNTEERRSLCDVLSANGYQVTVTACTREGLDVIRTQKPDLV
ALEMDMPSPGGTIFYARMRRDPELRHTPVVVVSSVGPRPAALRKGVPVVQ
RPAATGVLLDTVSRAMAV
>Dde_2680 diguanylate cyclase (GGDEF domain)
MLTTRAVSLLQALRRPLQGAALGLGAPLGWFVIRWLCDIHPQHPLYERWL
FAYMLVGTVLVFMLFGLIIGRHERRFAGLCLIDPLTSLFNKRHFDLRLGQ
EVARHQREDSPMCVIMLDLDHFKKVNDTLGHQAGDVVLMAVASTLRGCVR
TEDVLARVGGEEFAVVVPRTDMHGGAALAERIRAAVEEQIIPVGGGRETT
IRVSLGVACMEAGSVPVLPHDLMEQADEALYRAKANGRNRVELAAPAAEK
GA
>Dde_1945 putative PAS/PAC sensor protein
MFIKAPFTGLFSFCPFSAALRFRAVLSLRYLPSVVLCRNIISALLSAIYI
DGMIAPDFKPFFLKKSRNSSGVFTAFLTLFIPAVFLSALAIALFLYADMQ
HRIDLEKRQESASVSSAYDGISMELNIVFQSILNALNRGSLKEYAAVPSS
ENFARLVSDMYSFALDNNQFDQIRMLDPAGMELLRINRSDSGPVLVPEEN
LADKSRRYYYKDIMELAPDNIYISRLDLNIENGVVEVPYKPIIRIGTKLL
DRSGKLLGIMVFNYLADNMLNGAWMLRSSDQGVLMLLDHEGYWLQSDTPS
QHWGFMFGDTLGINFAQRHPGVWQQMLQTGSGQIATSDGVFTYAAVAASP
AGHTIYSYKQIHVPDKYLRDWFIVSYMPFPSMTEFLWAEGLPYSMAFFLV
CLLSMVGTFMRAGFLQERKEAVLALRKSEERFRGIVETSHDWIWEMDLSG
WITYSSPRIREILGYSVEEAYGKRIFDLMSYNDARTAWGHFMKAVENAAA
VEHHENAFQHKAGLRVVLESNMVPMEGDSGELLGFRGIARDVTEKKIVLS
QLETARKEAENASRAKGEFLARMSHEIRTPMNAVIGMCHLALKTALTPKQ
FDYLTKIQSSANSLLGVINDVLDFSKIEAGKLDMERVRFNLETTLTNVAS
VNSIAASVLPDNDIVTPVWDNRNVIP
>Dde_3609 response regulator receiver domain protein (CheY-like)
MPAKTILVVDDEKHIRMLYKEELEAEGYTIATSDGQEPILQVVAREKPHL
VILDIKLAPDVSGLDLLQQIRSQDQQLPVILSTAYDSFQHDLKSIAADYY
VVKSVDLTELKSKVAQALADRG
>Dde_2951 PAS/PAC sensor signal transduction histidine kinase
MHTENQSTACSVRFEVPEPTATLLSLLADDAAKGSGLAYARSVLGPLTGW
DIRQLPAALHAALAEADALAPLQVWLRSDRTQPFACMFSHGGATFRLNVH
CRSITAGEKALQTAVATCEPAENRLPQTDTPGTIPPLLDRFPAFVALIGQ
DYTVRYANRTFREMFGDDAYGPCYRCIHGRQSPCDVCAPFDVFETDSLTI
SEWEHQPTGKAFRTFAYPFALDDGSTCVLVIGLDISQSLKAQKALIHSEQ
RYRAITDNLATGIAVVDANGCIQAVNPKITEWFGSTISGGVFVDDLFSLI
RSAAPPVPQQSPPAGTGAAQSLLLAILSGATWETELPLKSLSGERTFRIV
VCPVLDSEDMAGTSVLMLDDVTERRQAEQSLQRTRKLEAMGTLAGGIAHE
INQPLNALQLYASGLEMMLEKHGSIEPDVLYKRLSWILREAGKIREIIAH
MRAVVMQEETPHCGPVMVEEAVRSALGLVGAQLQSHGITLQLDFGNAVQL
EQVVINLVVNAMHALDSVDIAEKTITIHTAAAPKGMAMLVVEDNGPGLNG
LQERIFDPFFTTKETGSGMGLGLSIVHAFIETWGGSVHAGDRPPPERGAR
FVILLQPAGDCHAHNDNR
>Dde_3717 response regulator receiver sensor signal transduction histidine kinase
MPDLTAAAESAPLSVMLVDDEPGILATMGPLVADMGYQVVTAQSGEAALQ
LAHDSRPPHVLLTDVRMPVMDGMALLRAFKTAWPDTEVLMLTGHGDMQLA
VESLRQGAGDFLTKPVNADVLEFALARAAERIALRGQVRRYTSQLESLVE
QRTRELLEAERLAAMGETAGTMAHAIKNLAGGLEGAMFVLEKGLELDNRE
YLEQGWQMLRKDVGRLRDMAMNLLHLSRPAQPDMQPGDPLGVARDVVRLL
QSRAADAGALLRLEPSHQSENAKKSGSALFDYSALHACLMNLVINAVDAV
EEAVAAGTLEHGAGTVSIRVVQDNVCVRWIVCDNGSGLPAEAAGQLRNGR
FTSKPAGSGFGLMATRKSMREQNGELHIRARARGGTEAELSLPLSGKACH
E
>Dde_2857 methyl-accepting chemotaxis sensory transducer
MLHFIRKSIGLKTLTLIAGISVVVFTILIGVTTQRQYDGMLGQMDTALTR
VSELIKLATDGPMLVGDDDGTKAQFALLAKRYPDTQVYITNFKNNITYST
RTGTVRKDVEDVFSDPSVLALTEKAVKTDVHEGLLLKEGGKSFMLRSTSI
PNDDSCHHCHGSSQPILGQLVVVKDVTPMVAGIHRQVLETVAFSVGGLAT
LICIVFFFLRKTVIKPVQEITEASHRIAHGELETQFTVHSQDELGKLESN
LGEMVGKLKEQLGFSRGILQGMTTPFLVTDTEGNVTFTNKGMVDCLCELG
DPDQHVGKTVGEFFYNDVSRETLTHKVLANRKAITGVEVEFTDRDGETRY
SVLDSSPIYDLDGNLMGAFTVCTDMTEFRRQQRLVEEQNSRITRAAEAAG
AIAVQVSSASEELSAQVEQSSSGAEEQRSLTAEGATAMEQMNATVTEVAR
NASNAAEMAGKAQDVAKNGVSVVEDTVRHINDVARQAESLKTEMGGLADK
AEGIGEIINVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLA
EKTMSATRQVVDYVGSIQESTRRNMAATEEAVKLVEQSTAMAGESGRTLH
SIVQMVVETADQVRAIATAAEEQSAASEQINRSMEQISRISSETADAMNQ
SAQAVSDLARLAVDLNAIITDMRR
>Dde_1391 metal dependent phosphohydrolase
MDCGIRVGLFPLVGALARALDLVSREVSHHHARVACLTDSIALELRLPAA
ERRNLLLAALLHDAGALSLQGRLDALQFETDGVTHARAGYALLGICPQLR
DVAELVLHHHTGYQVLARNIGRAPMLANVINLADRLDVSLPRSGGQAVDI
CATARGMRRYAGSLFHPDYVEALCRAVETGVAQECFTTPWGVLGRLDPDM
MGETLDSDGLFDFASVFSQVIDFRSRFTATHSSGVAACAAKLGQLAGFSH
SEQAQLYLAGLLHDVGKLAISSELLEKPGPLTEEEFARMKRHPEYTAEVL
GEVPGLERVSHWASHHHERVNGSGYPYGRKGGELELGARIMAVADIFTAL
SEDRPYRSGMTREQAHGVLTALCNEDALDPVVANLLFTHYDELDDVRLTA
QSKALKEFRAFAARLDDADQ
>Dde_3022 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MTTAGELCIVRQNRIAATPLMNSLQHFLLTPFSASVGCGLLLLTFSALRY
LKLLREVRRHPVSLHRCGTTQFITLVGFIAMFMVLYLLMLTNSGPHIPQD
ISAISGTILFLGAVFVFITAQVTSTGLHTALSANASLQHQAVHDYLTGLP
NRRLIMELLGEAMQTAPAGYALVFVDIMNFKRVNISFAHYVGDQILEQVG
QRLQTSMKPGDVAARLGGDDFAILLRTGSPREAVQRTQAVKAALKQPYFS
GDIQFSLDCGFGLYMGTAQDTRPEHVIAKANTAMMRAKQRGRNRIAVFSR
SMQDKAQLTIHFENQFRRSLRNGDFFLVFQPQYALTPQPELIGFETLVRW
NHPERGIVSPAEFVPMAETTGLILHLDRYVLREACRIWGEMRASLPACRA
LHFSVNLSASHMDRPTFIRKLEKTLAAFEMPHESIILELTESALMSNPET
AARKMQYLRSIGLHVALDDFGTGYSSLAYLTRFPCYCLKIDKSFVDNITT
DENSVRVVRAIIHLAHGLGMVALAEGVETPEQLAQLQDMGCDQVQGYLLG
KPMPQAALRDVIARNC
>Dde_3468 serine/threonine protein kinase
MFIGRYRVCGLLGRGGMGAVYKVLQPVTGRMAALKLLRPSDVLEELVGTE
ELARRFYEEARIMGQLEHPHVAAVLDADHDARNRPFFLMEYYCLNLGMLI
GESYRVEAPTRRLPLDRAVRYARQTLEALRRMHYAGIVHRDVKPYNIMIT
ADDDVKLIDFGLSRLRGETGHGTAGRLHKGVKVGSPYYAPPEQENDPESA
DARADIYPVGVMLYRMLTGVLPTGEEAMAEGGIPPASQFSDDLDAEWDVF
FERAMAPDPGARFACAAAMLDRLNVLERRWRARVTNTCTLAGASPLRRQC
PPVHTDVRTVPLKAGTREARGVFGLDDLWRPLCPAGETFEDQGDMTVLDS
ATDLMWQQSGSDYPLTWDEAAEYVHSLNAMRFAGYGDWRLPTVAELVTQL
AEPPMLGDYCVPPVFDTRCDVLWSADTKSHVAAWFVSASMGFVGWQDFTC
RFSVRAVRTHSGE
>Dde_0893 LexA repressor
MGRNREDDITPLQQETLDEICRYVSAKGYPPTVKEMSETFGISHASVHDR
INQLVRKGYLKREEGKARGLTVTKHPQTNAVALVAVPIVGTVAAGHPIFA
HENITGEVLVEASVVGSGKCFALYTQGDSMIDAGINDGDLIIVRRQPIAE
DGDIVIALLDDEATVKRLKIDNELIELVPENPRLKPIRVKPEDELRILGK
VVGRKRI
>Dde_1194 ABC-type amino acid transport/signal transduction systems periplasmic component/domain-like
MRTLFLPLMTASCPCLRFHAVRLPVLLCIMLFFIACAPLNGAAEEKPLPR
SIVAGAIITPPWIMGTEEARTTGYCTAVFTEAFRRVQTRLITLPMTKPRL
QSSLAKGKIHAVLCSSRSWHPNLTLPMAESLPVGQSGNIILMRRSSAVPV
RSPQDLAGRTMAARLGYFFPAEYEEAFKRRTIRRVDVTSGLSGLHMLLAG
RVDAVIMEENEAEWLLWQEKQEHAVVIVYRFSALTPLALLLSGPEQRLMP
AVNNALRHMQQDGTIQALRTRYLQKHLESID
>Dde_1994 GAF
MSCKGSFVPTVSTSGSRRIYSGPTVRRHVSVTNSMSTNSCYQHILGIISS
VFDAYSSVLFLPEGSGEAYSVAARFSLGDKINPACTIMPGQGLVGWILRN
QQPMLVNNFDQRQCFLGYYMQNEESKIKAFMGYPLGKGMGAICLDSKRQY
SFSDKDQKILQLFGELIVDMKDSSCAIEEKASVSSYYNALQLLYELRKRV
TRWKPFLAQFLAIVAETARFSHAYFCVLDEKAGTYFVEGQTRPFENAHAA
SELPLGAGLIGWVFKNGTPVITDSNASGSQVAPLFGKDAVTPQFHSVICL
PMHVHKRTRGVLCLAHETPRKVSDEVRIFSQMAAGHLALFLENLYLRSQL
HDLENELGQQRAAGSGAREPSDTTTSGDI
>Dde_2106 CheA signal transduction histidine kinases
MQEDGVQLDVNSQAFMEEAQDLLTELESALLELEEQPGDTELVDRVFRAM
HTIKGSGAMFGFDDIAAFTHDVENMFDRVRNNELQLSREILDLTLACRDH
IAYLLQCAGSGTQVDLEKGSALTAKVRLMLGAGDQQEPADAAPAQTAQSA
DSSFDEEDGSRRFTYRIRFKPAPDIFLTGNNPLHLIEELRDMGMLTTYVH
TSALPSLAELNPESCYLWWDMLLHTSAGEQEVRDVFMFVEDECELSVQVV
DSGDRIDSDEKYKLIGEILVERGDLKPEDLQRVLSSRQPMGKLLQQAGVV
SEDSVESALQEQQTVRDMQQKRETSSEAASSIRVAASKLDYLVDLVGELV
IVQSQIAQMVHEREDADMLALSENLERLSDELRDATLGIRMLPIGTTFSK
FRRLVRDLSADLGKEVDLVTFGAETELDKTVIERLSDPLVHCLRNSLDHG
VEPPQQRVAAGKPRKGTITLGAAHSGGEVLITISDDGKGLDRDRLLSKAV
ERGIVAPDAELSDKEIYALIFAAGFSTAEKVTSVSGRGVGMDVVRRSIEE
LRGTIELTSEPGMSTVITIRLPLTLAIIDGLQVQVGEESYVIPLAPVEEC
VEHFGTADSGRKQIINLRDEVVPYISLRKLFDVSGTPPEIEQIVVVNALG
SRFGIVVDRVVGEHQTVIKSLGKVFKNVEGISGATIRGDGTMALILDLPR
LVQSAISAR
>Dde_0178 response regulator receiver domain protein (CheY-like)
MMNDMEALYAAQTVLIIEDSPVQSKIIRNQIMALSQFDTLAAYTLEEARA
LLTTHKERIFVAVIDLNLPDAPNGEGVDLCLDFGVPTVVLTATFNEDIRR
RFIERNVADFFFKGTIQDMDPMVRSLERLFKNQFVKALVVEDSRMSRAHL
RHLLEVQRFQVLEAADGLEAVDRLAENPDIGLIITDYNMPNMDGFELVKT
VRARYKVDRIAIVGVSAAGSGSLTAQFLKNGANDFLTKPFEVEEFYWRVN
QTVSVLEVMKDLRTCQDTLPEG
>Dde_3234 two component transcriptional regulator, Fis family
MPRILVIDDDTIVCETIESLLSRLQYQSRSAHTLEQGLQLLAAEEFDVVF
LDVRLPDGNGLEALPRIRSHENSPEVIILTGEGDPDGAELAIQGGVWDYL
VKPTPIKQTTLTLNRALQYRQEKLNKQAAPPVALNLDGVVGSSERIRESF
DIVARAASTDTNVLITGETGTGKELFARTIHRNCGRAGGPFVVVDCASLT
ETLIESTLFGHKKGAFTGAEADQEGLAKLADGGTLFLDEVGEMPLSLQRS
FLRFLQERTFRPVGGTQEVKSDFRLISATNRDLDAMVERGEFRKDLLFRL
KTLHVVLPPLRQRLTDLKPLAMYYIDKLCEQYNVPNKGFSSDFFTLLARH
DWPGNVRELFNVLERAFVASGLESMLYAMHLPQDLRIKAAKAHLLREQPD
ELPARGQTGCARNQQDADGLPCPLPDMRSFKHMMERKYLESVIARHKGDL
PAILETSGLSRSHFYALLKKNNIVL
>Dde_0723 cyclic nucleotide-binding domain (cNMP-BD) protein
MVLYTGQADAACCEYDADVEMLRAIPVFSELPLDFLRAYAYLCERIRFQE
GEYLFRQNERDSRAYLVVSGTLEAVRETDSGVLPCRRYGSGEFLGSLALL
AETRRLFSLRALEPAVCLVLPRKKLLVDMQSSPEVASRFLQALCHAVVNW
EEALLEETECCGEHTPKVGVSLI
>Dde_3000 multi-sensor signal transduction histidine kinase
MTDEQSTIRVSVADTRERKRRQRELLLAAVAFLAVIILTWVELTYLGVDS
YFFLALFNLNFILLLLVLFIVVRNGVKLILERRRRVLGSRLRTRLVLAFM
SLSLFPTVLMFVVSARFVQTSVDYWFKSQVETSMEMALDVGQTLYSTTRD
RLNQRGDFIVKEIIERRFAWGGKSMDAYLQKKQQEYNLLLVGVLRTDRSE
QNWHGDASAAALWAETKARIDWDSLEAQPRYWSLLWPGQEADYAVGVLPV
DDGRTGYLVLVENIGQGLMYKLDRVVRGFDEYKKLKTLKHPLKVTLYFIL
GVLTLLIILGAMWFGFRLSKELTAPIMALAEGTERIARGDLTVRLEDSST
DELGVLVQSFNRMTEDLEMSRSRLTDANLMLAAQNEEKEQRTRYIEAVLD
NIAAGVVSLDAEGRISTMNKAAGAMFSIDPRPLLGSRPGDLLSGEHSRMF
REMVRQFKASPESQWQRQMTLRAGDYEWKLLVNAVGLPTPQGDYNGLVAV
FEDITELEKMQRMAAWREVARRIAHEIKNPLTPIKLSAQRLQRKFGPDIE
DPIFPQCTELIVRQVEQLQQMVQEFSAFAKLPEVKPLPGDIMPLLSELVT
MFRTSHSGITWEMHAPQSLPRMNLDKKAMHRALLNIMTNAAEVLEGRESP
AVTVTVRHDKALGLVRVDVADNGPGLSAEERSRLFEPYFSRKRGGTGLGL
TIVKSIVQDHRGYVRANAAPDGGTIVTMELPVT
>Dde_3027 transcriptional regulator, Crp/Fnr family
MKFSEINLLDELQRPELTELRGIFTRRSVTKGAVAFHPETDENLVFVIAS
GRVRIYLGYEEKEFTLGVLEPGDLYSTHAGCYAQALEDSTLMVTDVQSVK
RCMSEIPLFTRTMVRVLGQILNNSFSIIGSLAFKDIYTRLTSFLHKEALR
TGTPCSEGTELRLALTTEQLSLHMGATRQTVSTLLNNLVREGIMVKKGRS
IWVIPDMEALHRQTQQ
>Dde_0347 methyl-accepting chemotaxis sensory transducer
MSFAAWPYLIRFHQGKNMSIKWKVLAVALLGPLVVALLMAVSWVRDIRHG
AEEAILEKSRSIVLMAEATRHQMAVKLKDGVVRPLDELPSDKVVSAVPVV
TAMRAAAENAEKAGYEFRVPKVSPRNPANTPTPLELEVLAKLKKEQLDEY
VVREADAIRYFRPVRLTQDCMFCHGDPKGSKDPTGGIREGWKVGSIHGAF
QVISSLEGVHARVRSAAIGVGITTVGVLLVLGLLARYFLGRSLLSPLERL
RAYAGAVAGGDLKARPEGKYEAELALLRDSIASMVGDLRDKMAESAARTE
EAAQQTQRAEAAMGEAKEQEAKVSALLESMARIASEAKEIAEQVSLAAQA
LSAQVDEVASGAGIQSARSQETAVAMEEMNATVLEVARNSAESAATADET
RHKAAAGENVVEQVVASIARVNSRAQTLRGEMAGLGKQTEDISRIMDVIS
DIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMHATKEVGD
AIGTIQKSAHDNVEHVENAAGAADEATGKAREAGAALKEIVRLAEHTSDQ
VRSIATAAEQQSATSEEINRAVDEISAVATDTAEGMDQAAGAVARLAELA
ARLEELIDELNSRK
>Dde_0879 two component transcriptional regulator, Fis family
MSEIATPAAMVHSGRLCLLIVDDERDFASGLARLISSRFRDIDVVPVFSA
KEALEVLAERSVHLMMTDLRMPEMGGMQLLRQALEVQPGLSMVVLTAHGT
IETAVEALQSGAYDFLTKPIEPDQLFSAVAKGLERSRLLEENNRLRQIIS
AGGEPGELVGEGRAMQQLKRTIAAVAQSDYTVLVRGESGTGKELVARLVH
RLGNRAGRPFMAVNCPAIPENLLESELFGHVKGAFTGADRDHKGLFAVAD
KGTLHLDEIGDISAPIQTKLLRCLQDGEIRPVGASRSETVDVRVVASTNQ
DLEARIADKSFREDLYYRLNVLTVTLPPLRERVEDIPLLVHYLLRKACTE
MGLEEKEISPDVVEWMTRRTWPGNVRELQNFVRRLTVFCAGRLVDMDIIR
MVEQGSGGAMPPVVAGGLSPGGFRSGEGFVPYKDAKAKVVDDFTTAYLRD
LLTSAGGNVSEAARMSGLSRVALQKILTRLDINVARYR
>Dde_2519 transcriptional regulators, TraR/DksA family
MPDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIP
AARINALPNCSLCRDCQQEMENN
>Dde_1069 diguanylate cyclase (GGDEF domain)
MTDNNQDLVQEHEGLAGLPVEQPPPPSFIRIFWLPVILYAGFVLLFVYWA
GAEAEKEALADLDARLRVAAVALPGMLASDFHDRAIAPGSVGIDEELKNR
ERFNRYAAEAGMIYVYTLVQFRDGFCFSSPTVTVEEAQERRSWFFYPYEN
PPPAFMKALQTNTAQYVSYADEWGRFRSVAVPMTSPSGRRYLACADIQLQ
EVHEEIRQRQQFALLASLGFMLLGVPFLLAGRQAVAIYARYSLGILSRNM
KLKRLADHDSLTGLLNRVSFFRVVDQRILMMRQVGAQGALLMIDIDDFKE
INSRHGHLFGDEVLLGVSHILRQTARKQDTAGRYGGEELMLFLPDASADA
ARSVAERLCAQVGEMPFTFQGRTIRCTVSIGVAHFTAPSDMAMGYAEVAD
NALRQAKRHGKNNVVVLGA
>Dde_0817 diguanylate cyclase (GGDEF domain)
MTSKKSLRVPAPPVAGAPSVDSGAPCSEALKHFLCGSPAVIVTDKGSPCC
VLRPADILAAVADRAGLQTLPAGSFCGEAGQPELPAQHDSVSGPAAADAP
AGCPGEHAGLTDGTAGLLLADVVPVLNMAYEPLHPDEPLLNAMEALAECE
NSVVLVLDGKGTPALLERGDVAALMDCSDDPWSTPLGSCARGNVLSLPSA
TGVQAALNRLENSPYSHVLVTDDRQEPAGLMSVRELRHAAAIRDAQAVHN
LLDWQRIQLNQELREHSQRLAQLENYLSAHLRTGIIGISPQGRILFCSGP
ALDILHAITPVNPTGKELHVLALSIDFFRKVQQALAGCDASSLCTFSYTL
PHPEQNIIHCTLSHLAENGQPLGQALTMREAPDSSDHLSLEQQAFYDALT
GLPNRHLFAERVSQEMRRSRRDGLRFALAFLDLDNFKEINDTYGHLLGDS
LLQEVARRLQRGIRASDTVARFGGDEFLALLPETAPGTPTLNVLEKLRNS
LDRPFVLDGHELTLCCSIGVAHYPDDASSVSGLMNTADKNMYKDKAARRL
TGCRLTSDGQ
>Dde_3535 histidine kinase
MKGKTTIEDLVGIEHSKLNFFQELQQSIEELKESNKELEEQRRETAAILD
GITDVMMVLSEDLRIISVNHVFMQLFPDSDPHGQYCYKYFRHSHTPCREC
PAFRSLSTDTVCRETAIFRINGRNMQFEMVASPLKSPYLPEHRVLIFKRD
VTLEKEYQAKFYQAEKMATMGVLAAGVAHEINNPLTAVTGFAEGIRRRLP
KLRGLVDDQLFTDFQEYTDTILKECLRCQDIVQTLLTFSRPSSAEFSQLS
LNSVVSETVWLLHNHFKKHHNIKVNLNLDETVPHIFGDEAQLKQVVLNLL
TNALDSMSETGNKDRCYFSGVLAVETAPFGESGAKLIVSDTGCGIPPDNI
DKLFEPFFTTKNVGKGIGIGLSTCYSIVRKHGGEITVTSTEGKGSQFTVT
LPGNRGEQRV
>Dde_3097 two component transcriptional regulator, Fis family
MAQILLVDADSGFAHMLGAIIEGLGHRVHHAASLREGRALAAAAETDVVY
LHVQLPDGSGTTAVESFRSAPGRPEVVLLTDHGDPDTAEEAIRMGVWEYV
EKSSPADRIILPLLRALDYRGRRPSRRSTASLKRDDIIGSSRALQKCLDT
VSEAAFSDASVLLFGETGAGKEVFARAIHDNSHRAGGPFVAVDCASLTRT
LAGSILFGHRKGAFTGAEQNKDGLVLQAHRGTLFLDEVGELPLSMQKLFL
RVLQEHRFRPVGGRNEVTSDFRLIAATNRDLEKMVSQGTFRSDLLYRMRT
IVMHLPPLRSRTEDITELADHYLQRMCGKYGVPHKSMAPDLQETLRAYAW
PGNVRELIHTLERAVLAAQDEPRLFARHLPDHVRISTARAALQQRRTDST
AAAQPSRDEDTASGAPESRPQAPRPCHTCGTLPESYGTPAVQPESTGQGL
PHLHDTAGHNAAVPQEKHPLSPDHSPLPPFFTFRDNMFRDYLRELLRRTD
NDIAAACAMSGLSRSYLYDLLRRHGLRNGGTTSGS
>Dde_1943 histidine kinase
MGKDVPLDLVGDPLRLGQVLTNLVSNAIKFTSSGEVIVSVKLVKGSGEKS
RIRFAVKDSGIGISSSDLAKLFNPFSQADGSITRKYGGTGLGLSISNKLV
QLMGGEMHVESEPGRGSIFSFELEFERHRTDSAAEHLSFTGLEGTRVLVA
DDNFTSRAILKEVLESLRFDVTLAESGEEAVDLVQKTAEPFKVVLLDWRM
PGLDGLACARHIRQLDLPVRPTILIITAYGREEVLGEIPSEIIDGVLLKP
VARSLLLNTILDALPEYSSRPEQESRIIQIDTAQLRQELADTSVLVVEDN
KINRQIAKELLEGVGVRVTLAGDGLEALALVENYDFDLIFMDIQMPRMDG
LEACRRIRQLQHKKQPPVVAMTAHALAGDRETSLRAGMNDHITKPIDPDE
LYAALANWIKRNHAPEGPDGIASSAEMELPQPDDAGDDADQPYSSRYADA
PLLDFESGLKRIKGNRKLYNGLLREFADEFATYPQTIRQYIGQDMPDEAR
RVNHALRGVAGNIGAKRLYNISIEISDCLKEQLLECAPLVTELGSSMLMT
LREIEHYLETLEAEHAPESGHVSSEGLAEQVEKLRALLKVHDTRALESVE
GLKSVLQGSQPDIYDDLVRALNKFDFKAALKLLDRIHLQTEENGMVQ
>Dde_1584 diguanylate cyclase (GGDEF domain)
MPQLGDGQMARCMRAFLLTCDPALPGTVSALWPSEVIRWTVFERGAAALE
SLFSEPPDLVLVDMQLADMQGTDLVRMMKSENVYRHIPVVLFVPSAVLEQ
GMDWSLVEADDFLVRPCGPAELQARVELTISRASRSLDANPLTRLPGNTS
IIHFIQEQLDKKADYAFGYADLDHFKSFNDKYGFSRGDEALMMTARIIVN
IIKAYAGTVSFVGHVGGDDFVFGLPEDCIESACQRIVSSFDSIVPHFYDA
EDRARSGIVSTDRQGNVCSFPLMAISIAVVMNTGGRLQHYGEVSAIASAL
KKKAKEDPRSNYVMDRRRA
>Dde_1493 response regulator receiver (CheY-like) modulated CheW protein
MSQSNILLESGTNELEIIEFIIEEHDAEGTLYKGHYAMNVAKVLEIIRRP
DVVGLPGTHHPAALGTFSLRGRVLPLIDLARWLEKGSLDSPGAKVIVSEF
SGTITAFLVSSVTSIHRLSWSQIEAPDAYLHRFSNESITGVVRFEDRIVF
LLDMERIVASMNPHLDLKAHAERIEESVSGDNLKTLIADDSSSIRNMIGA
TLKKAGFDVTATSSGLEAWKQLEAWKKESQEQGRPLSDFVVLVVSDIEMP
EMDGHNLTRRIKDDPVLKQLPVMLFSSLITEALRHKGEAVGADDQVSKPD
LPSLTSRARALITSYFGI
>Dde_3084 putative signal transduction protein
MSENSRTASHRPVFFSKQPIMDSDRRIWGYELLGGEIQQGIFTVFPEHEA
AATSLGSSAYFRLQEDMDRGKRVMVAFDAESIILGIPRALPAKAGVVRVS
QEATKTEGVPEELRALKKDGYTIAIDCSHANRPDKECMLLADVVCVDFSV
KAAVIACSRGDASSTMLARGIRDNDMFEAARRMGVGLYQGPFFKEPEITE
GQGLSSHKVARIELMAILESPDPDLKGVAEAVKADVSLTFRLISLLNSSA
FGFRQKIESVDHAVNLLGWNQTRSWLRAVLVADMAGQSEGSQELALISMQ
RARFLQQLTAHYDYWGFNPETLFLLGMFSLLDAILGIPMQEVTDMLPLTS
SLKESLTGDPNNEHRPLFDLMEALEDADWNTLHEMVPRLGFEPDVVRSLY
SEAMDWAASFFAVQSGPTA
>Dde_0318 putative transcriptional regulator, Fis family
MSDRTAKGTASAGVTPLVEGLFAMSVEAGPLLDTIPLPLAVISPERKVLF
INEAAQVLTGFSLEEARGLHCMYVMRSSLCPDKCPLAKVEDTGAAVCVDA
NIVSKERRKIPVRATFAPVLAPDGSIAGYVEALEDIRILQELEIKQGWSY
GFGDMIGHSHEMERIFQMVPGIAQTDSSVLVTGETGTGKDLLAEAIHNAS
ARAKGPFVKVNCGALPETLLESELFGHSKGAFTGATESKPGRFRMAHNGT
LFLTEIGDLPLSLQVKLLTFLDDKVIHPLGSTKGVNVDVRIVAATHRDLR
QMVREGKFREDLLYRLNVVRFHMPPLRERGEDINLFLNHFVHVFSEEFGK
KVTGFSQDALYFLENYAFPGNVRELRNVVEYCVNVCGQETIEVEHLPRYL
MEQPAGVPAGTGYGVQPAPEAPPAGMMPPPGMPAPVSSAASGAVNWADME
RKMILDALLQAKGRKNRAAEILGWARSTLWRKMKHYEIESS
>Dde_3714 response regulator receiver domain protein (CheY-like)
MPHKILIVDDDPYIVKYLVDILSDNGYATCSASDGADAMAVLEREKPDLV
TLDLEMPNEWGPRFYRKMTKEPAFKDTPVIVISGLSGIHLAIRNAVASLK
KPFDPNKLLEIIRQTLGEQERSQAAQASDDE
>Dde_0071 response regulator receiver domain protein (CheY-like)
MPTILIVEDDPITRGILRDIVTSYGHKVLDVADGRTAWERLQNDPDIDLM
ITDVRMPGLDGMELVGMLRSNDRLQGLPVIITSGVVGLRQIARLLRRGAS
SFIAKPIDPKELQHCIQNTLAAGTGVPHSSRPDDVSARS
>Dde_2769 multi-sensor hybrid histidine kinase
MNRTPLKRRFTVTLMLFTLLCCALYTVTASSFMHYHNAQITSRTERLLHA
LVLQRENDLANQIFVGHIRALRSTAADLQETDDVYSITVYDKSGKPLIHT
RPERPLPLTGAEMAILAQGDVDARGTENGVPLLYHTSALMVIGELQGFVT
VAYDLSHVRRDTILLSAMLTILLLGTVIAAGMVCSHFITQHIRRPLTALR
DAMHRARSGELQHRAPIEAQDEVGRLAESFNAMVATLQRNESSLRHAQTI
YKDIFENALEGIFQITGRGYLINANPALARMLGYSSVMELLAERGTTPLK
SLVNRRDLARMLRMLRAKGAVDGYETRVYTKGGGITWISVSARTIAKEET
GQPESFRYEGFVKDITEHRRLRELEQTRTAMIEADKAKSDFLAHMSHEIR
TPMNSVLGMAEQMLRTPLSAEQKECMDVLKNSGESLLHLINDILDLTRVE
GGQLALASAPFTVHAVVYGVRDMLSLQARQKNILLAATIAPDVRKNHMGD
AQRLQQILVNLLGNAVKFTDNGEVSLHVSRAPDAVHDGDLLFTVRDTGIG
ITPAEQSRLFQKFSQASTAIHSRYGGSGLGLAISRHLVDLMGGTIRLESE
PGVGTTVTFTARFAAVPEETARTGHEAEQPDTAGDDATALPALTVLLAED
TPSNRAVVRMMLQDTPCTVIEAEDGQQALHLFGQYDIDVVLMDINMPVMD
GMEATRQLRRQEHGSGRRTPVIALTANAFQQDIIRYRQAGCDGHLVKPVT
RKALLTALQSCAGGGATHSGSGA
>Dde_3713 response regulator receiver domain protein (CheY-like)
MPQNILVVDDEMSFRFYLKTLFETGGYTVEAARNGSEGLQKARTKKPDLV
VLDVMMPRKGGLEMYRGLRSDPVLCNVPVIMLSAVGAGTFAHALAMIGVA
QGQLPPPQAYMEKPPCPEKLLNTVRTVLASHEQDAKRHREDKESCNAAQD
SDC
>Dde_0257 histidine kinase
MRLRWRRLADTPVIMAYCQLTLCLQTREALMMYAVHALLKALWRLEKENE
TLRSALSGTQHAAQARPLGGLPYAEVALRPGAGEQTGGEAGKQADTSPEM
GRDLYVSHVSDALLELAGMTAPLKDPADIFTAVPWQLALLCTQSTPVLVS
IPLRIRTAQGGSLPVLAMPLPLPHHDSAASRTSWRFMVLPVDGVPCEDGI
NLTRAMADNMIDMLWAKDTKGRYLFANRAICEKLLCCDGIDPLGRDDIYF
ARRQRALGWQHTFGELCLNSDDIVLLSQKPGRFVEDGLVQNKYLALEVQK
SPLYDPRGVLIGTVGTGRDITRQKEAEEALRRSEHRFGMVLRATSDIIWA
YDIAKDTMTCGKMDSPDPFRAMQECHCLPVHHEELKDIKDHVSRFFREGG
DNLQHEFNLTAHDGNTIWLLSRGRVMEFDEKGAPLLAVGSHTDITELKTA
QVAAEAAAKAKSAFLATMSHEIRTPLNGVLGMLQILGNEITDPKPLRLTR
TALDSGRKLLAIINDILDFSTIDAGAAPLDHAPLRIRETVNSVLANFSEE
VRQKGLTLTAVVDRAVPDVLVGDESRIRQILFNLVGNAVKFTREGSVRVD
VLLLTAPADEEARLLVTVEDTGIGMEAEMLPRIFDPFFQVDGTYRRRYQG
TGLGLGIVRSLVSMMNGNISVESTPGVGTTICCSLLLRKAQQQEQPAGGQ
EQEIPALPPARILLAEDEEVNRMAATYLLRKMGHTVTAATSGLHVIELLQ
DHEPDCILMDIQMPDMDGIETTKVIRGGQIAGLENIPIIALTAHAMKGDK
EIFLAAGMDGYISKPIDAAELQRELYRILHTGKNKKPPHTKHDGTQE
>Dde_2370 multi-sensor hybrid histidine kinase
MPVNTCMRPETAGIIRRLRPRACPVTKDATMHHSLSLLFVTCSEELADGI
VHSASECGLHPAYSLVGSAQELSRALAEESWDIILAEPHVAGMPWQQILA
AVRRVHEGIPFVLVMPAPDPQAAAQAVHDGADEVLLPADWHTGAALQRLR
SQAVLSRRQGARRRSRADDEKEWRALVENTMVGMFRCRPWGELVQVNPAF
AAIFGYRSPQELLNAHAGKKGPHVPAAEIKELLPALRNEGLLTEYEMHAA
RPDGSGVWLSVNARTIRGAAGEISGIEGTVEDIGNRKSVENMIVRAKQEW
EKTFDSVPDIIVLLDSDLHIRRCNMALGTLLGRHPRELVGQDSRKTLFDG
GTHGPVLDSLPALSRGQSHTEELHLPALGGHFLITFSPLFTGTGSDAEPE
GTVLVARDISSRKQLEAQLRQAQKMEAIGTLAGGIAHDFNNILGVMMGYT
EMSMDETTEGSAMQRRLDAVLSAGRRARDLIHQILTFSRHEEPSRHPLNL
VSPVKETVKLLRASLPANIAIDLRTDTVPPVNANLSQIQQVVMNLCANAA
HAMRGPGGNLLLALDSTLLTAEEARPLSVPAGTYVRLRVSDTGHGIDPQI
LHSIFDPFFTTKKPDEGTGMGLALVHGIITAHGGTVSVSSVPGQGTDFTI
LLPATDGQNVSEPGGSLRHAGSGIVLVVDDEKALAGVMADMLQSMGYTPR
IADSPAQALHMVSRAPQEFALVLTDQTMPDMTGTELAARLHAVRPDLPVI
LCTGFSEGLTREAARKAGISELLLKPVLRGDLAKALACLEFDCGL
>Dde_0758 PAS/PAC sensor signal transduction histidine kinase
MTKSILCPGARMGIFQHPVTDDALYQAVQLPSFSYYMVASTRMQSVMELV
QPLVVRTVILAAGLWVVGIFLTIVVYRHSVSQYDLALSELQCTQRDELAN
LFKALVTDVQAAPEPATAMEVFLRRLCERTGFELGAVYLPDKQERYRFVI
YQSDSFHPIARNPGKGMSAPDVLRAHLLGLMQHPVFLQAEQNVVVPDMSV
DERFAEFYPAGEGSPAQPLLKTVIRGACVSRVRRASVGHVHVGLFSLVSL
EKSSDVAGLLDEVMPLLGPVAESKLAEVHLREQEMLFRNLYDRSALVQVV
VNPETGTVLDANMAACEFYGYPHEVFVTQTLYDLWQAPRDDIDAVMSAST
ELYTGLHIQKHILAGGDLKDVEAYMGRVPWKGQHALLCAVFDRSGIKKME
AALLRSEQQLAMLMEKLPLALALLDETGTIRQVNGAFVALTGRTAISCTG
RYLHELGLESLHEASCPVVQDALLPAGREPQELLLVTLQGEERHVLVHTT
RLQMHEEGTRYAAFIVDMTERRRLDDLVVQSEKMASVGGLAAGMAHEINN
PLGGIMQGAQNIIRRLDPHREANRAAAQACGCPLEAIRAYLEQRGILRFI
GGIEDSARRAARITSNMLEFSRPCAGEWREARLEHILDVALELAANDYDL
KKRYDFRTIRIVRDYSPDVPAVRCIVSEVEQVALNLLRNAAQAMAEAATE
APAITLRTRVDGEYAVFEVEDNGPGMSREVARRVFEPFFTTREPGRGTGL
GLSVSYFIITATHKGAIAVQARPDRGTAFVVRLPLRSAECLHEEKPAVEN
>Dde_1385 extracellular solute-binding protein, family 3
MKFVKALVLLLVTVMAVPAFAGDIDLAKKSVLNDILKRGELRVGFDAGYP
PFEMTDKSGNFVGFDIDLGKELAKSMGVKFVPVNTDFDGMIPSLLSGKFD
VIISGMTLTQERNMKIGFSEPYLVMGQTVLVAAKHKGTVKSYKDLNDPKF
IVVSRMGTTGEEATKKYLPKATYKSFDKEVDCAMEVVNGRADAFVYDLPV
NEVFQAQQGKDKTYLLNEPFTFEPMAVGYKQGDPDFANFINHFLRQLKND
GRYERMYNKWLRSDAWQSQLK
>Dde_2384 response regulator receiver domain protein (CheY-like)
MNESTARTAPAFSASSGNGFAALAVSASTGVLSLDKASLRSCGIRTVHTF
SSGVQAAQWLDTESTRHSQTHWAGVDVILCDDTLQDMSGLEFNAILSRHP
LLQRIPVILLSASATRASVARALQSGCCGMLLRPYTMERFAAQMQRARTI
MRRNTAAALLMHTGEQTLDKKQFDEALAAFTSVLTARGEPDDAYFARGME
YLSEQRYDAALKAFGHAARINMLHAEALNGMARCWKAKGNTDNYLRCLKL
AGEAHLRCERFREARTVFAELMQVSGTEANPMLQSAAALVREGRLSVAAG
AFLHGSLLSPEIPLHESVARACQFTSCPQSAMEQICCAIETIAGPSRAEP
LRKRLLAPAPQRHDSAPRSESHFPRLEEIVAVARHTIRLYRQSAA
>Dde_1429 extracellular solute-binding protein, family 3
MKRLLLIAVALGMIFSAATASAGKIEEIKDRGVLVAGVKDSVVPFGFVDE
NSKQLVGFDVDICRYIAGQLGVELELKTVTSATRIPMVTQGSVDIAAATM
THKHERDNVIDFSITYFMDGQKILVAKDSGINSVADLKGKKVATVKGSTS
EKNIKAAQPDCRVLSFDEYPQAMLALKQGKASAVTTDSTILLGLKNSDPE
PEKWVIAGDYISAEPYGLGLPENDSDFRDFVNKALNDMWRSGEYEKVYNK
WFGPDSRYYLPLTWTMELWPN
>Dde_1668 sensory box histidine kinase/response regulator
MTDMLPVLDTESTLQRLGGDASLLQILYAAYLEDTPQKLLALAAAVSTGN
FKEAGHVAHTLKGSSATVGAAAMSDKAREMELACQQGNLREAESARHALE
QLFSAVRKAILEPPA
>Dde_0544 periplasmic sensor hybrid histidine kinase
MMNNMLRYGVRGVQTRICLLTLVVSTLVALAFGSYEYVTALDAEYARLER
FAVSQADRVARLLLVPVWNVDRQASMSIIDTEMDDERVHAVIVYDEGGSI
FIGRQRGSGGVLVNTSRSIPRGEFIVTSRPLRQGSLRFATLQLYVTPEYV
HRTMKDNVVAAVMHMLALELVLVLGILLVVRRSLIVPLSALTAWVRRESP
LYDYGTRIPKQADDELGELVDSMNGMLSEIEKRDRMLNDHSKHLEKLVAE
RTQELEHARHTAEQASKAKGDFVASMSHELRTPMNAIIGMIEIALKTELT
VKQREYLTIIRSSARSLLGVVNDILDISKIEAQKMELEHIPFSTQEMLEE
VTDLFRERVGMKGVELVLDIEADVPAVLVGDPLRLKQVLVNLVTNAFKFT
KQGEVRIRVAVGSRSQDVVQLEFSVRDTGLGIGEEARNRLFDTFSQAEGS
TARLFGGSGLGLSIARELVRLMGGTITVASEPGKGSDFRFTGRFSLPVEA
VEARHHRTGEAPRGRVLLVEDNESNRLVMTRMLERLGYDCDALQDGYTAY
ERLKRQAALYDLILLDWRLPGVDGLEVLEKLRAEKQPLPPVFMMTAFGRE
AELERAEELGVASFLSKPVKLSSLSDAIRAMRGEMTPEEQTDTAMIRQFD
GMRALLVEDNIINRHVALDMLQDMGFSVVSAEHGEEALAVLDDVEPPSGP
GFDVVFMDIQMPVMDGIEATRVIRQHPRWRHIPIIAMTAHVMSEDRDKAL
EAGMNDYVTKPVDRMMLLQVLQRHVGEHAARAAEDGARRIRQSFDARSEH
LQEHNILHMHGMGVAGAEQEGAVGGVSSGHAGAGVPEQGTDIISDGGPDG
VPPMPARLPGLILEEGVDRLGGKQDIYFEILKKFAEVYAQAADAVRQAAE
QNHRDVVAEKAHAIAGAAANISAGELRESALALERAARDGAPMELELEQF
AYWLEQVVRSIGVLKSRMRPVPDAPEDGMHP
>Dde_1151 metal dependent phosphohydrolase
MEQESAALALGIAGQAAREGSRTEAAGSGLLFTRGDAGCGDVRLTVHQLA
ESLGNAIDARDPHTHSHSDEVAETARVTALAMGCSFEQAEMLHIAGHLHD
IGKIGIPDNILRKASPLDDEEWEIMRSHPLIGANIIRPVALLAESGGVVD
VVLHHHERWDGKGYPHGLAGRDIPLGARIIAVADTLSAMLQTRPYREGRS
FGAAVAEIVRCSGSQFDPAVVEAFVASLDRVKHAWPAGGQAPAFMPPR
>Dde_0323 response regulator receiver domain protein (CheY-like)
MKNAVVAVYDSDRQFADNLTGRLAELGIACTVCRSLDEARMMLFAPETDV
LVFGTEEVGSEVMRFLTQVGRPDACAQVILMVRKNQVRLSIEGMKNGAFD
DIYIPFALDALLVRLSLAVGQAKLARRRRQCTGVQQSGKGSPQGRG
>Dde_2533 response regulator receiver domain protein (CheY-like)
MATILIADDDPVTRTTLSIMLEDEDHEVYEAADSAETLDLLETTEPHVVF
MDMVLPDCEAGEGITRVRRAAPAVTIIAMTGQPDTARFSAMARDAGCKEC
LIKPFEKNRVLALTRKVLAARGHKV
>Dde_0703 methyl-accepting chemotaxis sensory transducer
MKLGWKLSLPQIVIVLALGVASYTVISSSFERMQEKFVSSMVTDVFHTVD
SGIDTAGTSALALAAAFSRQPEVIAAFQLAHSGNINDENSPQGQAARDML
RKSMAPALAGYENSTGRKMQLHYHLPNGRSLVRLWRKKQVQRNGVWTDVS
DDISSFRNTVLDVNRTGNPVQGIELGRGGFVVRGVAPVKGPDGKALGSVE
TLVPFDPILEASSGHGTSLSLFMNKDQLSVARSLNDPQKYPLTGDSFVLV
SGHDNAALLEDVDTQLLEEGKTGLAVRRHGTQALATHPVRDYRGEQVGVL
VCALDLSEFVAIKAYSSNMLAAALAVILVLPAVASFILLRRFIIRPVSLM
VDKIKDIAEDRANFDDRLHDSQKDEIGDLARWFNTLMNKLGLMMTDMQRY
VDVLNTVPDPIFAVDEEYNIIMANKATQDFLGLDTNKLKDCNCHDQFSTE
VCQTERCPIEMAKKVNGPVKADIMSIDRDGQTLYVKPSADVLRDAQGRKM
GYVEVASNVTDLVHSQNAIEEQLARISKVNEATREAASQVTDTTHQLSGE
FEQINSGILTQQQRVTETATAMEQMNATVMEVARNASAAAQQTADTRDQA
LEGARIVGESVNAILRVQQQTAALKEVMQNLGSRAEGIGQVMTVIRDIAD
QTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATHEVGDAISA
IQDGAQESIRNVDTTTEMVGNASQLAEQSGAALNKIVELVNLSSSQVDAI
ATAAEEQSAASEQIRSAMDEVNHIANEVAERMGESSNSVHSLSELASQLD
MLSKS
>Dde_3101 hypothetical protein
MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRG
FQWSDAEMSGIESWFVDSDIKPQLHFEYMDSKRMAPDVATRHMFVLLREK
YSRDYFDVLMAADDNAFELLRAHRQTLFPGVPLVFCGVNLQHMPRGSMPE
RTTGVLERVDVEGTLSLALSMHPATRSVVFVADGTTTGQRMLHAAREARR
GFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRDRNGRVLTVEE
CVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRG
ADPSELSIIAETPVTAVLDYRQLSRFGVSLPDLPDGVIVRNLPQGSPSVW
WYGAGLAAAAAMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICL
LLDTAGRIAAMNRPAEQASGIDSHAAEGMLPEAVLPMLAGALEKLRRGLQ
HNDEFCLLQAEARMDNGLRRFDLEASSLLPVAAGALLVLRDVTDRAVLEA
AAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVLFEDTEGNARA
AARCGCSLSALRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPE
RPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGADSVQIIRAADA
ELVVYEMITLGLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVD
IAKLLRSERMFGGSGGEMSGYEGFALATRIAEHRFGAPLKVESPENDVRI
EFMLNQE
>Dde_1722 putative anti-sigma regulatory factor (serine/threonine protein kinase)
MQVVSQWIVRQQLLDDLDLLLTEACANAVRHAYPPDSPGCVEIAVKLLPG
KAVVCSISDWGEGFRQCPLDLQKPIPLCPPEAESGRGLYIISNLVDKFAI
LQKDNKNTLRVTINLAGR
>Dde_1834 diguanylate cyclase (GGDEF domain)
MSSLLNILICDIFIFTAQRLHARWQEESPDDIGGEDIYVKRKNPLVMWGI
ALETEAAAFLEQAACSGCVLHNWDGRMPDNSALESDEPVLVWVSQRGWDA
VSALPDEEMQFLHLVPRVLLLQQDVSPEYVERALDAGFTDILKAPFSEPR
VREVFLRAAEMQNLYDDIIRMTREICLEREVLARKNDILEFIVTFLSRAT
ESLDPVEILSNAREDLSMLLPLRALHAALWHPQQKDSLEAEVFLGVGEHT
QAGLEWSQMLLKAAAKLSGVPVSGYTVEQLGQGGAEDAPAPGKVILLPLK
MRDETLGCLALLTEDDCQLGKDQVQVLHSAMRHLALAVKNALLFREMRLQ
ADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLMMLDIDYFKQINDRF
GHQAGDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQARVLA
ERLRKNIESRVFRHHGKTIQATVSIGLTGFKPGALTPRDELVREADAALY
LAKANGRNVVCTFAGSCNEKVKKAQ
>Dde_1684 periplasmic sensor signal transduction histidine kinase
MEVADYKRERSTLIIAVLTLVTVGLSLIVSTGQVLSQQEEAGTQHLILAS
RSVLQAVDSSLRRNMTTDAQGGATFGAGAAEFFRELEQSGEVLFVGLIDK
HGGRVLTSRSSGESGTILFPPDALRTLAQTGEWHGRVGFGLASAYVYGKR
IIPGNTGSMSIARAETGEPLPAFLVVGLDMAKHQAIYRKFRQNALFQAAY
ILGAAVLIWALAMGLIKRREMAGKARQLERFQVKLLDNLPDGLVTIGENG
TILAANPAANGILQARGEGLAGKLLDDLPDDILRCLAAPETETAGWRQDS
VRGAHLEILSVRMPGSSETDDASRLVIIRDRTQIRTLEKSLSDAEKLAAV
GTLAAGVAHEIRNPLSALRGFAQYFAKKFKDRHPEEVYAQTMVREADRLN
RVITDLLYLARPRRVTPRLVRLRALVSEVEDLVRFDLDERKVNMVVSLGP
EEVWADEDTLKQAVLNLVLNSLDALKETDGGARQVDVASGLAKDGVWLFV
RDTANGMTKEQAEQAFEPFYTTKKKGTGLGLALVHKTMRDHGGKAIIDTA
PGHGTTVGLFFPDHDDDVADDTNEADAERDS
>Dde_3715 multi-sensor signal transduction histidine kinase
MSHSILLVDDEEGIRTVLGLSLADAGYNVSVAATGEEALRLFDQSRPDII
LTDIKMPGLSGLDLLKRVKNIAPDVEVIMITGHGDMQLAIQSLKQDATDF
ITKPINDDVLEIALNRAHERISMRNQLREYTENLENKVREQSARLVEAER
QLAAQQMMDGFSVGLKALLNAMDSTLGGVFNELPCFVAVHSRYLEIIAAN
DLYREKLGNLVGHQSWEAYYGRDKDSNGCPVLTAIREGRGSRTEEMLVDK
TGKGIPVLVHTAPILDNDGEVELVLEISVDTSEARRLHEELRLTRHRYGQ
LFDEAPCYITVQDKQFRVVEANRRFREDFGDAVGGFCHEVFVHRQTPCTG
CPVQRTFNDGQPHQYETVVTSRSGEQYNVLVWTAPLRDAAGNITEVMEMS
TNITELRKLQDRLSNLGLLLGSTAHGIKGLLTALDGGIYRLGSGLERNNT
ERVHDSYEDIRHLTDRLRKMVLDLLYYAKKRELNWEVVLASHFAPEVAAL
VRPKAEAQKVRFTIEVAPDAGTFEADAGALSSAFVNLLENAVEACTADRT
PDKKHAVHMAVSGLPDRVEFCITDNGVGMDRETREKLFTLFFSSKGAAGT
GIGLFVASQTVQQHGGSISVGSEPGKGTTFVITLPRTLPDSAKSEPRHPA
PAT
>Dde_3063 conserved hypothetical protein
MTAIRRVYIALMITLVVCIHATAARSAPPESISLATHIMCPYSFYTAEGT
FDGMAVRAVRYALARMNVALDLVVVPWGRAQMMVRNGYSDGFFAASQNEA
RDVYATHSVTIAEQQWDWCILSESTMTPDMKEFKDTACVGAFNGSNMLYW
LECNEYKVLGTPPNTRLLVEMLLARRIDAIVANDLVLEKIITAENLSDRL
RVYPLKNKPLGVYFSNTFLAAHPGFLETFNRHVLEYRKTPEARTAFDCFT
DPCSPFAPQPETPH
>Dde_2762 histidine kinase
MNTMNLPRDAEVNCDKQHFEHVRQRIDSKMRDYERYGFSTHQTRAFNVFF
DLAQEFETVEEVYSLAVLVLKSFFAVESALFIADSAGKLVLRCCSQGPAC
GVNAADVDQLSPDDGPRVIKNHLCLPVRGKTSASPAPSSPLAGGRLGVLV
ILPADGAPPPEQLYYEKFANRLGFQLHNKLLFMKNSEHIRFINSLVHDIG
HNVIVPNMYFKLLFRQLDGKIHALSEALNEMAGQRMAGSGQSDAFRKLSY
VHDRLSEQYKEIYRHFQQTSLFLETLLRQSHFEKGHYVLQRTLFDLHSRI
VTPQVERFRSRFDEKDIAIFQEAETGGTPLMIPADMGLISQVLANLLSNA
VKYARPPQAADRPARYVRCRVSRVPDHFGPGKDGARVDVFTTGPAIGASD
VPNLFTADFRGNNTDHEYGTGHGLFFVREIVDLHDGETGYEPWPDGNNFY
FILPCATAD
>Dde_1018 response regulator receiver domain protein (CheY-like)
MRILVVDDDTVTVSMLEALLQEEGHEVVTAFDGRDVLGCLQGNSLDLVIT
DIFMPEQDGLVTIARLREEFPQLRVVAISGGASALGKVDALRAAQLMGAD
AVLAKPLQAEQVLRVVNAVSSAEKGTSFSGI
>Dde_0459 ABC-type amino acid transport/signal transduction systems periplasmic component/domain-like
MWYSIRTVVFIMLLLAVTALPFYAAQKTERPLVLVCDVWPPYQTQHDGRV
NGFATRVVHHVLNGMGVPVKSTKAFPWQRAMGIFQAGGADVLFSANHTAD
REMFARYPEESLVDSPWILWSRKKNLRSLDDLRGLKIGVVSGYSYTLEFW
DYIETHCVVEKVHSDAINFKKLAMGRLDAIAAEYGNGRHVLNSLHLKGIR
PHTDIVIKTDGLYAIFNKNTVTEKFVQEFSFRLKEYKASEGYRDLYRAYF
MPGQE
>Dde_2411 methyl-accepting chemotaxis sensory transducer
MFDKVTLSTKFYSGSIGVLVLAITLLCSVTMWLVSDGMTQLGTATLQSTT
ENLVTTIEMQDAITQEKVSSDLSVLEREMQGYGSLMLSDLHAHQTRMVNQ
VTKEAATATIPALVLTSDEGMTPLYENFEIVDRVQKLIGGTATIFQVLPG
KLLRISTNVLKLDGQRATGTYIPESSPVYKTVMRGETYRGKAFVVNAWYI
TAYKPLRDLGGNIVAVAYVGRKIMTPALTEALASISVGGLGFAFAYNDKG
EMIYHPEHQGKTLSDIGVEQYFAGVQNGLVTYMRDGAEQIAYVRHFEPWG
WHIGVQMSRKEALRGMDTMVLTGSLGVAALALVAGCISTWLLLRSITGSL
NKLEGFTAAVATGDYNASVDYKADDAIGKTIAAVRRMVEVIKERLGFSNG
ILQGMATPCIVVDTQEKISYINQPALTLLHAQGSADSWTGQSIGKLFHND
ASRRTILGDTVRDRQSQTNKELVLQRNGEDIFLRVDTAPLHDLDGTLLGA
FGLYTDMTENHRQNKAMQDKNDIIAQAAEQADGVSQNVSATAAELFGLIE
EANQGAEVQKERTGEAATAMEEMNATVMEVARSAAEAASGADEARARAEE
GARIVRDVISASRKVSDEAENLSSNMQLLGTQVEGISQIMNMINDIADQT
NLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMDATKQVTVAITEIQ
EGARRNLEATRKAVSSIEESTDLANQSGDALQQILNLSVETADQVRSIAT
AAEQQSAASEEISHATAEVDRISTETLQAMNRSADAVSQLAEEARRLQQI
IEMMTSE
>Dde_0692 response regulator receiver domain protein (CheY-like)
MMMQDTVHAIVVDDQEKLAEVMTKRLKKRGMDVTMVTSGEACLKALAARP
DTDVVVLDISMPGMNGLETLAVIRKQYPLVQTILYTGNPTPENGIQGQEL
GAFYFLTKPAHMEELVDLLHSAKARKQRKAEQVSRLAQSAMEQPQ
>Dde_0077 diguanylate cyclase (GGDEF domain)
MVNAAAVGRLLAVPLGLFVAAALAGLFMNTLPPSAGEVAPYAAWAALAGG
MPLAERFRRSRAVFVLLLGCGVFLLLYNVLPALGDATRVRLWYGIVLTLL
PCNLLLFAFLEDRGVFSRWGMGMLAWLLGQFMTAAFIVRGGGVLLATSLG
RTMQRAVEGWVYASPLPGWFDSWTPLTQPALLLVLLAAVVLVVRVVRLED
GFSASLLGTLLSLTAAFHAVGNGPVVSLFVAAAGAAQLTALFRDSYSMAF
VDELTEVPSRRALMADAKKLGGSYCVAMADVDHFKAFNDTYGHDVGDDVL
RMVAARLAGVDGGKVYRYGGEEFTILFPRLGRAEARPHLEAVREAVAAIP
FRIRTRNKSAKVVRDKSVTVTVSIGLAQREDGEDDFESVLKKADKALYKA
KKAGRNKVALL
>Dde_1665 methyl-accepting chemotaxis sensory transducer
MNLRSISAQLSALITVLIVLTIGALIFFATASSYESTIENQEANIKTLNN
QIVSSTEHILASNIASTQAFGERRYVVNALRYNNARSIPIKEYQNTVESL
DLISSLLVTDTQGNILGGVNEKNETVTDGREEDEKLIEAVAQGKKYIAGY
AVRSEKTGDALVKLAAPIIDPITEKVLGGVIACLDWSRISENFISHVTIG
KAGYIVVTDNAGVVITHPDKTVQFTSLAGFDFMQQALQHDETAIFYSWKG
KKKALISATIPATGFKVLSTSYADDLAAAAATQRNMLMLTGTVAAVTLIA
VVLFFMQRMVIRPLRCLQDYTNSVASGNLSAVMTGSHRYEMAALSTGLQN
MVQELKDKLAFSRSVLEGITLPLLIVDKDEKATFINTPCLEMLQIDKTPE
QCLGRTLADLFYNDPGRKTAVGRSMAEKQVISNLEVTITGHKGRQTEVLA
NVTYLQDMEGTITGGMCLYLDMTEFKKQQRRIAEQNKRIAETAENAGNIA
EQLASASAELSSQIEQSSRGTDIQRERTGETAAAMEQMNATVLEVARNAT
ATAGLSEQTKQKAFEGGRVAQQTIEKITLAHEQALALKADMAELGQQAEG
IGAIMNVIADIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKT
MSATQEVGQSIKRIQQSTQKNIRNTESAATAISAGAEMVTLSGKALEEIM
QLVQESADQVNSIATAAEEQSATSEQINRSTEEITRIADETAMAMQSSSQ
AVADLARLADDLHTVIAQMKSDNAA
>Dde_2345 transcriptional regulators, TraR/DksA family
MVYLPRRAEEGYMNQKDIEYFRDLLNSMLEEAQEKGDATLEDLTDNNEVC
ADPADRATMESDRAFTLRIRDRERRLIKKIRQALDRIEDGSFGVCEDCGE
QIGVPRLKARPVTKLCINCKSKQEEDESLRGD
>Dde_3212 CheD, stimulates methylation of MCP proteins
MSGYSAEQRAAMQCMSLARHGLPHALADCGLPHVHLKIGEGIVTRRALLI
STVLGSCVSVTFFSRRLQLAGIFHAMLPVITQSYRPCNEPCRFVDSAIEA
VYGNFEKRGLHPEEVEVKLFGGAFSMGLREEHPDRCMIDVGGRNVLTARE
VLAAKGLEIRSEQVQGTRGRKLLFNTRTGEVWVKLLNNAANQLARRQEEQ
ARAQSARGCSLD