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Gene list

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COG category: Signal transduction mechanisms
Organism: Thiomicrospira crunogena XCL-2, XCL-2

Number of genes found: 164

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Thiomicrospira crunogena XCL-2, XCL-2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tcr_0471 ATP-binding region, ATPase-likechromosome CDS527783 1068 + 0.421348
NA Tcr_0858 putative prophage repressorchromosome CDS935064 621 - 0.463768
NA Tcr_0750 CheA signal transduction histidine kinaseschromosome CDS820845 1953 + 0.445469
NA Tcr_0133 metal dependent phosphohydrolasechromosome CDS166647 1575 - 0.445714
NA Tcr_1040 response regulator receiver sensor signal transduction histidine kinasechromosome CDS1116972 1254 + 0.407496
NA Tcr_0122 diguanylate phosphodiesterase (EAL domain)chromosome CDS154576 1203 + 0.425603
NA Tcr_1911 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolasechromosome CDS2093280 807 - 0.421313
NA Tcr_1984 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorchromosome CDS2179058 2865 - 0.442583
NA Tcr_1773 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS1934249 2367 + 0.406422
NA Tcr_0555 putative signal transduction proteinchromosome CDS624664 1284 - 0.435358
NA Tcr_0969 two component transcriptional regulator, winged helix familychromosome CDS1047943 681 + 0.403818
NA Tcr_2190 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)chromosome CDS2414803 2892 - 0.44018
NA Tcr_2129 quorum-sensing autoinducer 2 (AI-2), LuxSchromosome CDS2350565 522 + 0.434866
NA Tcr_1913 PAS/PAC sensor signal transduction histidine kinasechromosome CDS2094267 3357 - 0.424188
NA Tcr_1497 Glutamate-ammonia-ligase adenylyltransferasechromosome CDS1620913 2736 - 0.436769
NA Tcr_1151 response regulator receiver (CheY-like) and ANTAR domain proteinchromosome CDS1251371 588 + 0.42517
NA Tcr_2004 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorchromosome CDS2207118 1776 - 0.466216
NA Tcr_0457 diguanylate cyclase (GGDEF domain)chromosome CDS514407 1050 - 0.406667
NA Tcr_0748 response regulator receiver domain protein (CheY-like)chromosome CDS819566 414 + 0.408213
NA Tcr_0770 diguanylate phosphodiesterase (EAL domain)chromosome CDS840668 1245 + 0.432129
NA Tcr_0208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS246603 1938 - 0.429825
NA Tcr_0166 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS195959 2094 - 0.429322
NA Tcr_1769 HPr kinasechromosome CDS1930803 1122 + 0.459893
NA Tcr_0757 MCP methyltransferase, CheR-typechromosome CDS826344 828 + 0.380435
NA Tcr_2189 periplasmic sensor signal transduction histidine kinasechromosome CDS2413284 1485 - 0.428283
NA Tcr_1476 response regulator receiver (CheY-like) modulated CheW proteinchromosome CDS1595770 975 - 0.428718
NA Tcr_1404 diguanylate cyclase (GGDEF domain) with PAS/PAC sensorchromosome CDS1517642 918 + 0.436819
NA Tcr_0226 multi-sensor hybrid histidine kinasechromosome CDS268082 3057 + 0.405626
NA Tcr_0749 Chemotaxis phosphatase, CheZchromosome CDS820065 654 + 0.397554
NA Tcr_0188 two component, sigma54 specific, transcriptional regulator, Fis familychromosome CDS220890 1359 - 0.437822
NA Tcr_1062 diguanylate cyclase (GGDEF domain)chromosome CDS1135679 1701 + 0.399177
NA Tcr_1127 cyclic nucleotide-binding domain (cNMP-BD) proteinchromosome CDS1216424 492 + 0.406504
NA Tcr_2068 multi-sensor hybrid histidine kinasechromosome CDS2283449 2847 - 0.415174
NA Tcr_0135 response regulator receiver domain protein (CheY-like)chromosome CDS169139 399 + 0.441103
NA Tcr_1208 hypothetical proteinchromosome CDS1320819 237 - 0.396624
NA Tcr_1203 two component transcriptional regulator, winged helix familychromosome CDS1316283 702 - 0.408832
NA Tcr_0116 hypothetical proteinchromosome CDS146912 1272 - 0.426887
NA Tcr_1487 transcriptional regulator, Crp/Fnr familychromosome CDS1607358 723 - 0.412172
NA Tcr_0227 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain)chromosome CDS271150 2532 + 0.421801
NA Tcr_1494 putative signal transduction proteinchromosome CDS1618054 840 - 0.417857
NA Tcr_1933 uncharacterized conserved coiled coil proteinchromosome CDS2121532 291 + 0.446735
NA Tcr_1382 two component transcriptional regulator, LuxR familychromosome CDS1495687 699 - 0.420601
NA Tcr_1383 Hpt sensor hybrid histidine kinasechromosome CDS1496459 1929 - 0.394505
NA Tcr_1139 dual specificity protein phosphatasechromosome CDS1231991 423 - 0.465721
NA Tcr_0361 methyl-accepting chemotaxis sensory transducerchromosome CDS409119 1806 - 0.435216
NA Tcr_1658 bis(5'-nucleosyl)-tetraphosphatase (symmetrical)chromosome CDS1812381 849 + 0.442874
NA Tcr_0379 diguanylate cyclase (GGDEF domain) with PAS/PAC sensorchromosome CDS428792 1623 + 0.39618
NA Tcr_1612 CheA signal transduction histidine kinaseschromosome CDS1765507 2085 - 0.458993
NA Tcr_1784 putative signal transduction proteinchromosome CDS1948807 858 + 0.400932
NA Tcr_0702 protein tyrosine phosphatasechromosome CDS771374 489 + 0.431493
NA Tcr_1095 response regulator receiver domain protein (CheY-like)chromosome CDS1177900 357 - 0.434174
NA Tcr_2180 PAS/PAC sensor hybrid histidine kinasechromosome CDS2400551 4233 + 0.44035
NA Tcr_2024 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS2234385 1998 + 0.404905
NA Tcr_0570 methyl-accepting chemotaxis sensory transducerchromosome CDS642390 2025 + 0.427654
NA Tcr_1820 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS1995265 1800 - 0.462222
NA Tcr_0758 response regulator receiver (CheY-like) modulated CheB methylesterasechromosome CDS827222 1131 + 0.463307
NA Tcr_0066 periplasmic sensor hybrid histidine kinasechromosome CDS80285 2166 + 0.400277
NA Tcr_0109 diguanylate cyclase (GGDEF domain)chromosome CDS138843 1386 + 0.455267
NA Tcr_0077 methyl-accepting chemotaxis sensory transducerchromosome CDS96879 2826 - 0.451522
NA Tcr_1039 response regulator receiver domain protein (CheY-like)chromosome CDS1115279 1704 + 0.392019
NA Tcr_2187 two component, sigma54 specific, transcriptional regulator, Fis familychromosome CDS2411331 1371 - 0.464624
NA Tcr_1588 carbon storage regulator, CsrAchromosome CDS1737796 213 - 0.41784
NA Tcr_1934 hypothetical proteinchromosome CDS2121886 465 + 0.427957
NA Tcr_1041 PAS/PAC sensor signal transduction histidine kinasechromosome CDS1118222 1593 + 0.383553
NA Tcr_1292 cyclic nucleotide-binding domain (cNMP-BD) proteinchromosome CDS1408037 489 + 0.400818
NA Tcr_1897 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorchromosome CDS2075294 3513 + 0.446057
NA Tcr_0090 diguanylate cyclase (GGDEF domain) with PAS/PAC sensorchromosome CDS117097 1263 + 0.41726
NA Tcr_0541 two component transcriptional regulator, winged helix familychromosome CDS606637 693 + 0.440115
NA Tcr_2131 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS2351864 1506 - 0.428287
NA Tcr_0134 cyclic-AMP phosphodiesterasechromosome CDS168336 780 + 0.434615
NA Tcr_0189 periplasmic sensor signal transduction histidine kinasechromosome CDS222272 2178 - 0.428375
NA Tcr_1924 multi-sensor hybrid histidine kinasechromosome CDS2108745 2706 + 0.399852
NA Tcr_0653 hypothetical proteinchromosome CDS729525 1221 - 0.420147
NA Tcr_0397 diguanylate cyclase (GGDEF domain)chromosome CDS447584 1668 - 0.43705
NA Tcr_0548 BolA-like proteinchromosome CDS613502 306 + 0.470588
NA Tcr_1377 diguanylate cyclase (GGDEF domain)chromosome CDS1491581 1236 - 0.445793
NA Tcr_0776 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS848255 2595 + 0.414258
NA Tcr_1762 hypothetical proteinchromosome CDS1923958 477 - 0.454927
NA Tcr_1202 periplasmic sensor signal transduction histidine kinasechromosome CDS1314680 1560 - 0.385256
NA Tcr_1038 anti-sigma-factor antagonist (STAS) domain proteinchromosome CDS1114959 303 + 0.366337
NA Tcr_0574 methyl-accepting chemotaxis sensory transducerchromosome CDS646989 2448 + 0.435049
NA Tcr_0986 BolA-like proteinchromosome CDS1062703 222 + 0.405405
NA Tcr_1222 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)chromosome CDS1338962 2448 + 0.42933
NA Tcr_0785 diguanylate cyclase (GGDEF domain)chromosome CDS859604 1509 + 0.411531
NA Tcr_0474 PhoH-like proteinchromosome CDS531188 969 + 0.432405
NA Tcr_0728 CheW proteinchromosome CDS800466 558 + 0.430108
NA Tcr_0431 hypothetical proteinchromosome CDS484358 534 + 0.397004
NA Tcr_2179 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolasechromosome CDS2399518 1047 + 0.427889
NA Tcr_1669 putative signal transduction proteinchromosome CDS1822643 879 - 0.420933
NA Tcr_0860 diguanylate phosphodiesterase (EAL domain)chromosome CDS937269 1194 + 0.404523
NA Tcr_1119 putative signal-transduction protein with CBS domainschromosome CDS1207011 1848 + 0.423701
NA Tcr_1518 protein tyrosine/serine phosphatasechromosome CDS1654065 663 + 0.396682
NA Tcr_1150 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)chromosome CDS1246902 4401 + 0.395592
NA Tcr_0197 diguanylate cyclase (GGDEF domain) with PAS/PAC sensorchromosome CDS232788 1524 - 0.433071
NA Tcr_0005 periplasmic sensor signal transduction histidine kinasechromosome CDS4714 1341 + 0.444444
NA Tcr_2048 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS2259617 2016 + 0.437004
NA Tcr_0028 diguanylate phosphodiesterase (EAL domain)chromosome CDS34455 768 - 0.38151
NA Tcr_0968 histidine kinasechromosome CDS1046564 1368 + 0.427632
NA Tcr_1436 methyl-accepting chemotaxis sensory transducerchromosome CDS1552158 993 - 0.433031
NA Tcr_1212 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelAchromosome CDS1325801 2151 + 0.453742
NA Tcr_1920 diguanylate cyclase (GGDEF domain) with PAS/PAC sensorchromosome CDS2101307 2682 - 0.423192
NA Tcr_0169 GTP-binding protein TypAchromosome CDS199697 1824 - 0.457237
NA Tcr_1297 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)chromosome CDS1413758 2676 + 0.383034
NA Tcr_1080 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS1158842 2304 - 0.396701
NA Tcr_0553 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorchromosome CDS619145 2667 - 0.43982
NA Tcr_0200 diguanylate cyclase (GGDEF domain)chromosome CDS237128 1059 - 0.421152
NA Tcr_1896 putative phosphohistidine phosphatase, SixAchromosome CDS2074689 507 + 0.443787
NA Tcr_1394 methyl-accepting chemotaxis sensory transducerchromosome CDS1506352 2523 + 0.402695
NA Tcr_0751 CheW proteinchromosome CDS822812 510 + 0.417647
NA Tcr_1271 response regulator receiver (CheY-like) modulated CheW proteinchromosome CDS1386807 978 - 0.399796
NA Tcr_0905 signal transduction histidine kinase, nitrogen specific, NtrBchromosome CDS982829 1083 + 0.42844
NA Tcr_1765 hypothetical proteinchromosome CDS1926699 1212 + 0.430693
NA Tcr_0380 diguanylate cyclase (GGDEF domain)chromosome CDS430485 750 + 0.401333
NA Tcr_1670 putative signal transduction proteinchromosome CDS1823524 894 - 0.447427
NA Tcr_1108 diguanylate cyclase (GGDEF domain)chromosome CDS1192097 1365 + 0.406593
NA Tcr_0027 methyl-accepting chemotaxis sensory transducerchromosome CDS31286 2880 - 0.396528
NA Tcr_1554 PhoH-like proteinchromosome CDS1701902 1410 + 0.439007
NA Tcr_0195 response regulator receiver domain protein (CheY-like)chromosome CDS229080 903 - 0.41639
NA Tcr_0021 diguanylate cyclasechromosome CDS25153 1272 + 0.41195
NA Tcr_0035 transcriptional regulator, NifA subfamily, Fis Familychromosome CDS42971 1695 + 0.454277
NA Tcr_0205 transcriptional regulator, LuxR familychromosome CDS242228 618 - 0.417476
NA Tcr_1931 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)chromosome CDS2116710 3870 - 0.4323
NA Tcr_1611 hypothetical proteinchromosome CDS1764907 567 - 0.395062
NA Tcr_1390 anti-sigma-factor antagonist (STAS) domain proteinchromosome CDS1503497 291 + 0.38488
NA Tcr_1225 anti-sigm factor, ChrRchromosome CDS1343671 663 - 0.464555
NA Tcr_1937 diguanylate cyclase (GGDEF domain)chromosome CDS2123210 2328 - 0.409794
NA Tcr_1445 PAS/PAC sensor signal transduction histidine kinasechromosome CDS1562513 1173 - 0.42029
NA Tcr_1929 HPPchromosome CDS2115134 972 + 0.453704
NA Tcr_1234 putative prophage repressorchromosome CDS1350314 462 + 0.441558
NA Tcr_1904 putative signal transduction proteinchromosome CDS2084741 819 - 0.416361
NA Tcr_0861 diguanylate cyclase (GGDEF domain)chromosome CDS938462 999 + 0.411411
NA Tcr_0730 positive regulator of sigma(E), RseC/MucCchromosome CDS802746 504 + 0.430556
NA Tcr_1851 diguanylate cyclase (GGDEF domain)chromosome CDS2026630 1863 - 0.393988
NA Tcr_1888 diguanylate phosphodiesterase (EAL domain)chromosome CDS2064862 1203 - 0.416459
NA Tcr_1504 SH3-like regionchromosome CDS1630840 675 + 0.376296
NA Tcr_0165 Hpt domain proteinchromosome CDS195568 354 - 0.392655
NA Tcr_0753 hypothetical proteinchromosome CDS823763 282 - 0.429078
NA Tcr_0777 methyl-accepting chemotaxis sensory transducerchromosome CDS850912 2139 - 0.411407
NA Tcr_2008 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)chromosome CDS2211915 2112 + 0.434186
NA Tcr_1613 CheD, stimulates methylation of MCP proteinschromosome CDS1767604 576 - 0.413194
NA Tcr_0754 response regulator receiver domain protein (CheY-like)chromosome CDS824075 363 - 0.407714
NA Tcr_0769 response regulator receiver (CheY-like) and ANTAR domain proteinchromosome CDS839956 645 + 0.418605
NA Tcr_1064 hypothetical proteinchromosome CDS1139443 828 + 0.410628
NA Tcr_1089 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS1170767 2004 + 0.398204
NA Tcr_1021 diguanylate cyclase (GGDEF domain)chromosome CDS1099052 903 + 0.45072
NA Tcr_1580 hypothetical proteinchromosome CDS1728628 1020 - 0.371569
NA Tcr_1714 UspAchromosome CDS1874715 453 + 0.452539
NA Tcr_0152 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)chromosome CDS183549 1899 + 0.445498
NA Tcr_0106 serine/threonine protein kinasechromosome CDS136378 1365 + 0.415385
NA Tcr_1243 transcriptional regulators, TraR/DksA familychromosome CDS1358730 429 + 0.41958
NA Tcr_0500 diguanylate cyclase (GGDEF domain)chromosome CDS559229 1377 + 0.42992
NA Tcr_1446 sigma54 specific transcriptional regulator, Fis familychromosome CDS1563701 1101 - 0.414169
NA Tcr_0470 two component transcriptional regulator, Fis familychromosome CDS527184 600 + 0.416667
NA Tcr_0542 histidine kinasechromosome CDS607345 1308 + 0.422018
NA Tcr_1444 two component, sigma54 specific, transcriptional regulator, Fis familychromosome CDS1561137 1380 - 0.426812
NA Tcr_2144 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelAchromosome CDS2364715 2160 + 0.449074
NA Tcr_0004 two component transcriptional regulator, winged helix familychromosome CDS4046 672 + 0.447917
NA Tcr_1999 methyl-accepting chemotaxis sensory transducerchromosome CDS2199589 1218 + 0.436782
NA Tcr_0755 CheW proteinchromosome CDS824494 531 - 0.451977
NA Tcr_1143 diguanylate cyclase (GGDEF domain)chromosome CDS1238105 1599 - 0.382739
NA Tcr_0759 methyl-accepting chemotaxis sensory transducerchromosome CDS828565 1221 + 0.44226
NA Tcr_0323 conserved hypothetical proteinchromosome CDS361477 783 - 0.408685
NA Tcr_0906 nitrogen metabolism transcriptional regulator, NtrC, Fis Familychromosome CDS983948 1464 + 0.45765
NA Tcr_1329 hypothetical proteinchromosome CDS1443972 459 + 0.429194