Gene list
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COG category: Signal transduction mechanisms
Organism: Thiomicrospira crunogena XCL-2, XCL-2
Number of genes found: 164
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Thiomicrospira crunogena XCL-2, XCL-2 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Tcr_0471 | ATP-binding region, ATPase-like | chromosome | CDS | 527783 | 1068 | + | 0.421348 |
NA | Tcr_0858 | putative prophage repressor | chromosome | CDS | 935064 | 621 | - | 0.463768 |
NA | Tcr_0750 | CheA signal transduction histidine kinases | chromosome | CDS | 820845 | 1953 | + | 0.445469 |
NA | Tcr_0133 | metal dependent phosphohydrolase | chromosome | CDS | 166647 | 1575 | - | 0.445714 |
NA | Tcr_1040 | response regulator receiver sensor signal transduction histidine kinase | chromosome | CDS | 1116972 | 1254 | + | 0.407496 |
NA | Tcr_0122 | diguanylate phosphodiesterase (EAL domain) | chromosome | CDS | 154576 | 1203 | + | 0.425603 |
NA | Tcr_1911 | response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase | chromosome | CDS | 2093280 | 807 | - | 0.421313 |
NA | Tcr_1984 | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor | chromosome | CDS | 2179058 | 2865 | - | 0.442583 |
NA | Tcr_1773 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 1934249 | 2367 | + | 0.406422 |
NA | Tcr_0555 | putative signal transduction protein | chromosome | CDS | 624664 | 1284 | - | 0.435358 |
NA | Tcr_0969 | two component transcriptional regulator, winged helix family | chromosome | CDS | 1047943 | 681 | + | 0.403818 |
NA | Tcr_2190 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | chromosome | CDS | 2414803 | 2892 | - | 0.44018 |
NA | Tcr_2129 | quorum-sensing autoinducer 2 (AI-2), LuxS | chromosome | CDS | 2350565 | 522 | + | 0.434866 |
NA | Tcr_1913 | PAS/PAC sensor signal transduction histidine kinase | chromosome | CDS | 2094267 | 3357 | - | 0.424188 |
NA | Tcr_1497 | Glutamate-ammonia-ligase adenylyltransferase | chromosome | CDS | 1620913 | 2736 | - | 0.436769 |
NA | Tcr_1151 | response regulator receiver (CheY-like) and ANTAR domain protein | chromosome | CDS | 1251371 | 588 | + | 0.42517 |
NA | Tcr_2004 | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor | chromosome | CDS | 2207118 | 1776 | - | 0.466216 |
NA | Tcr_0457 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 514407 | 1050 | - | 0.406667 |
NA | Tcr_0748 | response regulator receiver domain protein (CheY-like) | chromosome | CDS | 819566 | 414 | + | 0.408213 |
NA | Tcr_0770 | diguanylate phosphodiesterase (EAL domain) | chromosome | CDS | 840668 | 1245 | + | 0.432129 |
NA | Tcr_0208 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 246603 | 1938 | - | 0.429825 |
NA | Tcr_0166 | response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 195959 | 2094 | - | 0.429322 |
NA | Tcr_1769 | HPr kinase | chromosome | CDS | 1930803 | 1122 | + | 0.459893 |
NA | Tcr_0757 | MCP methyltransferase, CheR-type | chromosome | CDS | 826344 | 828 | + | 0.380435 |
NA | Tcr_2189 | periplasmic sensor signal transduction histidine kinase | chromosome | CDS | 2413284 | 1485 | - | 0.428283 |
NA | Tcr_1476 | response regulator receiver (CheY-like) modulated CheW protein | chromosome | CDS | 1595770 | 975 | - | 0.428718 |
NA | Tcr_1404 | diguanylate cyclase (GGDEF domain) with PAS/PAC sensor | chromosome | CDS | 1517642 | 918 | + | 0.436819 |
NA | Tcr_0226 | multi-sensor hybrid histidine kinase | chromosome | CDS | 268082 | 3057 | + | 0.405626 |
NA | Tcr_0749 | Chemotaxis phosphatase, CheZ | chromosome | CDS | 820065 | 654 | + | 0.397554 |
NA | Tcr_0188 | two component, sigma54 specific, transcriptional regulator, Fis family | chromosome | CDS | 220890 | 1359 | - | 0.437822 |
NA | Tcr_1062 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 1135679 | 1701 | + | 0.399177 |
NA | Tcr_1127 | cyclic nucleotide-binding domain (cNMP-BD) protein | chromosome | CDS | 1216424 | 492 | + | 0.406504 |
NA | Tcr_2068 | multi-sensor hybrid histidine kinase | chromosome | CDS | 2283449 | 2847 | - | 0.415174 |
NA | Tcr_0135 | response regulator receiver domain protein (CheY-like) | chromosome | CDS | 169139 | 399 | + | 0.441103 |
NA | Tcr_1208 | hypothetical protein | chromosome | CDS | 1320819 | 237 | - | 0.396624 |
NA | Tcr_1203 | two component transcriptional regulator, winged helix family | chromosome | CDS | 1316283 | 702 | - | 0.408832 |
NA | Tcr_0116 | hypothetical protein | chromosome | CDS | 146912 | 1272 | - | 0.426887 |
NA | Tcr_1487 | transcriptional regulator, Crp/Fnr family | chromosome | CDS | 1607358 | 723 | - | 0.412172 |
NA | Tcr_0227 | response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain) | chromosome | CDS | 271150 | 2532 | + | 0.421801 |
NA | Tcr_1494 | putative signal transduction protein | chromosome | CDS | 1618054 | 840 | - | 0.417857 |
NA | Tcr_1933 | uncharacterized conserved coiled coil protein | chromosome | CDS | 2121532 | 291 | + | 0.446735 |
NA | Tcr_1382 | two component transcriptional regulator, LuxR family | chromosome | CDS | 1495687 | 699 | - | 0.420601 |
NA | Tcr_1383 | Hpt sensor hybrid histidine kinase | chromosome | CDS | 1496459 | 1929 | - | 0.394505 |
NA | Tcr_1139 | dual specificity protein phosphatase | chromosome | CDS | 1231991 | 423 | - | 0.465721 |
NA | Tcr_0361 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 409119 | 1806 | - | 0.435216 |
NA | Tcr_1658 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | chromosome | CDS | 1812381 | 849 | + | 0.442874 |
NA | Tcr_0379 | diguanylate cyclase (GGDEF domain) with PAS/PAC sensor | chromosome | CDS | 428792 | 1623 | + | 0.39618 |
NA | Tcr_1612 | CheA signal transduction histidine kinases | chromosome | CDS | 1765507 | 2085 | - | 0.458993 |
NA | Tcr_1784 | putative signal transduction protein | chromosome | CDS | 1948807 | 858 | + | 0.400932 |
NA | Tcr_0702 | protein tyrosine phosphatase | chromosome | CDS | 771374 | 489 | + | 0.431493 |
NA | Tcr_1095 | response regulator receiver domain protein (CheY-like) | chromosome | CDS | 1177900 | 357 | - | 0.434174 |
NA | Tcr_2180 | PAS/PAC sensor hybrid histidine kinase | chromosome | CDS | 2400551 | 4233 | + | 0.44035 |
NA | Tcr_2024 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 2234385 | 1998 | + | 0.404905 |
NA | Tcr_0570 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 642390 | 2025 | + | 0.427654 |
NA | Tcr_1820 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 1995265 | 1800 | - | 0.462222 |
NA | Tcr_0758 | response regulator receiver (CheY-like) modulated CheB methylesterase | chromosome | CDS | 827222 | 1131 | + | 0.463307 |
NA | Tcr_0066 | periplasmic sensor hybrid histidine kinase | chromosome | CDS | 80285 | 2166 | + | 0.400277 |
NA | Tcr_0109 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 138843 | 1386 | + | 0.455267 |
NA | Tcr_0077 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 96879 | 2826 | - | 0.451522 |
NA | Tcr_1039 | response regulator receiver domain protein (CheY-like) | chromosome | CDS | 1115279 | 1704 | + | 0.392019 |
NA | Tcr_2187 | two component, sigma54 specific, transcriptional regulator, Fis family | chromosome | CDS | 2411331 | 1371 | - | 0.464624 |
NA | Tcr_1588 | carbon storage regulator, CsrA | chromosome | CDS | 1737796 | 213 | - | 0.41784 |
NA | Tcr_1934 | hypothetical protein | chromosome | CDS | 2121886 | 465 | + | 0.427957 |
NA | Tcr_1041 | PAS/PAC sensor signal transduction histidine kinase | chromosome | CDS | 1118222 | 1593 | + | 0.383553 |
NA | Tcr_1292 | cyclic nucleotide-binding domain (cNMP-BD) protein | chromosome | CDS | 1408037 | 489 | + | 0.400818 |
NA | Tcr_1897 | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor | chromosome | CDS | 2075294 | 3513 | + | 0.446057 |
NA | Tcr_0090 | diguanylate cyclase (GGDEF domain) with PAS/PAC sensor | chromosome | CDS | 117097 | 1263 | + | 0.41726 |
NA | Tcr_0541 | two component transcriptional regulator, winged helix family | chromosome | CDS | 606637 | 693 | + | 0.440115 |
NA | Tcr_2131 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 2351864 | 1506 | - | 0.428287 |
NA | Tcr_0134 | cyclic-AMP phosphodiesterase | chromosome | CDS | 168336 | 780 | + | 0.434615 |
NA | Tcr_0189 | periplasmic sensor signal transduction histidine kinase | chromosome | CDS | 222272 | 2178 | - | 0.428375 |
NA | Tcr_1924 | multi-sensor hybrid histidine kinase | chromosome | CDS | 2108745 | 2706 | + | 0.399852 |
NA | Tcr_0653 | hypothetical protein | chromosome | CDS | 729525 | 1221 | - | 0.420147 |
NA | Tcr_0397 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 447584 | 1668 | - | 0.43705 |
NA | Tcr_0548 | BolA-like protein | chromosome | CDS | 613502 | 306 | + | 0.470588 |
NA | Tcr_1377 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 1491581 | 1236 | - | 0.445793 |
NA | Tcr_0776 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 848255 | 2595 | + | 0.414258 |
NA | Tcr_1762 | hypothetical protein | chromosome | CDS | 1923958 | 477 | - | 0.454927 |
NA | Tcr_1202 | periplasmic sensor signal transduction histidine kinase | chromosome | CDS | 1314680 | 1560 | - | 0.385256 |
NA | Tcr_1038 | anti-sigma-factor antagonist (STAS) domain protein | chromosome | CDS | 1114959 | 303 | + | 0.366337 |
NA | Tcr_0574 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 646989 | 2448 | + | 0.435049 |
NA | Tcr_0986 | BolA-like protein | chromosome | CDS | 1062703 | 222 | + | 0.405405 |
NA | Tcr_1222 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | chromosome | CDS | 1338962 | 2448 | + | 0.42933 |
NA | Tcr_0785 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 859604 | 1509 | + | 0.411531 |
NA | Tcr_0474 | PhoH-like protein | chromosome | CDS | 531188 | 969 | + | 0.432405 |
NA | Tcr_0728 | CheW protein | chromosome | CDS | 800466 | 558 | + | 0.430108 |
NA | Tcr_0431 | hypothetical protein | chromosome | CDS | 484358 | 534 | + | 0.397004 |
NA | Tcr_2179 | response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase | chromosome | CDS | 2399518 | 1047 | + | 0.427889 |
NA | Tcr_1669 | putative signal transduction protein | chromosome | CDS | 1822643 | 879 | - | 0.420933 |
NA | Tcr_0860 | diguanylate phosphodiesterase (EAL domain) | chromosome | CDS | 937269 | 1194 | + | 0.404523 |
NA | Tcr_1119 | putative signal-transduction protein with CBS domains | chromosome | CDS | 1207011 | 1848 | + | 0.423701 |
NA | Tcr_1518 | protein tyrosine/serine phosphatase | chromosome | CDS | 1654065 | 663 | + | 0.396682 |
NA | Tcr_1150 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | chromosome | CDS | 1246902 | 4401 | + | 0.395592 |
NA | Tcr_0197 | diguanylate cyclase (GGDEF domain) with PAS/PAC sensor | chromosome | CDS | 232788 | 1524 | - | 0.433071 |
NA | Tcr_0005 | periplasmic sensor signal transduction histidine kinase | chromosome | CDS | 4714 | 1341 | + | 0.444444 |
NA | Tcr_2048 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 2259617 | 2016 | + | 0.437004 |
NA | Tcr_0028 | diguanylate phosphodiesterase (EAL domain) | chromosome | CDS | 34455 | 768 | - | 0.38151 |
NA | Tcr_0968 | histidine kinase | chromosome | CDS | 1046564 | 1368 | + | 0.427632 |
NA | Tcr_1436 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 1552158 | 993 | - | 0.433031 |
NA | Tcr_1212 | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA | chromosome | CDS | 1325801 | 2151 | + | 0.453742 |
NA | Tcr_1920 | diguanylate cyclase (GGDEF domain) with PAS/PAC sensor | chromosome | CDS | 2101307 | 2682 | - | 0.423192 |
NA | Tcr_0169 | GTP-binding protein TypA | chromosome | CDS | 199697 | 1824 | - | 0.457237 |
NA | Tcr_1297 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | chromosome | CDS | 1413758 | 2676 | + | 0.383034 |
NA | Tcr_1080 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 1158842 | 2304 | - | 0.396701 |
NA | Tcr_0553 | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor | chromosome | CDS | 619145 | 2667 | - | 0.43982 |
NA | Tcr_0200 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 237128 | 1059 | - | 0.421152 |
NA | Tcr_1896 | putative phosphohistidine phosphatase, SixA | chromosome | CDS | 2074689 | 507 | + | 0.443787 |
NA | Tcr_1394 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 1506352 | 2523 | + | 0.402695 |
NA | Tcr_0751 | CheW protein | chromosome | CDS | 822812 | 510 | + | 0.417647 |
NA | Tcr_1271 | response regulator receiver (CheY-like) modulated CheW protein | chromosome | CDS | 1386807 | 978 | - | 0.399796 |
NA | Tcr_0905 | signal transduction histidine kinase, nitrogen specific, NtrB | chromosome | CDS | 982829 | 1083 | + | 0.42844 |
NA | Tcr_1765 | hypothetical protein | chromosome | CDS | 1926699 | 1212 | + | 0.430693 |
NA | Tcr_0380 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 430485 | 750 | + | 0.401333 |
NA | Tcr_1670 | putative signal transduction protein | chromosome | CDS | 1823524 | 894 | - | 0.447427 |
NA | Tcr_1108 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 1192097 | 1365 | + | 0.406593 |
NA | Tcr_0027 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 31286 | 2880 | - | 0.396528 |
NA | Tcr_1554 | PhoH-like protein | chromosome | CDS | 1701902 | 1410 | + | 0.439007 |
NA | Tcr_0195 | response regulator receiver domain protein (CheY-like) | chromosome | CDS | 229080 | 903 | - | 0.41639 |
NA | Tcr_0021 | diguanylate cyclase | chromosome | CDS | 25153 | 1272 | + | 0.41195 |
NA | Tcr_0035 | transcriptional regulator, NifA subfamily, Fis Family | chromosome | CDS | 42971 | 1695 | + | 0.454277 |
NA | Tcr_0205 | transcriptional regulator, LuxR family | chromosome | CDS | 242228 | 618 | - | 0.417476 |
NA | Tcr_1931 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | chromosome | CDS | 2116710 | 3870 | - | 0.4323 |
NA | Tcr_1611 | hypothetical protein | chromosome | CDS | 1764907 | 567 | - | 0.395062 |
NA | Tcr_1390 | anti-sigma-factor antagonist (STAS) domain protein | chromosome | CDS | 1503497 | 291 | + | 0.38488 |
NA | Tcr_1225 | anti-sigm factor, ChrR | chromosome | CDS | 1343671 | 663 | - | 0.464555 |
NA | Tcr_1937 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 2123210 | 2328 | - | 0.409794 |
NA | Tcr_1445 | PAS/PAC sensor signal transduction histidine kinase | chromosome | CDS | 1562513 | 1173 | - | 0.42029 |
NA | Tcr_1929 | HPP | chromosome | CDS | 2115134 | 972 | + | 0.453704 |
NA | Tcr_1234 | putative prophage repressor | chromosome | CDS | 1350314 | 462 | + | 0.441558 |
NA | Tcr_1904 | putative signal transduction protein | chromosome | CDS | 2084741 | 819 | - | 0.416361 |
NA | Tcr_0861 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 938462 | 999 | + | 0.411411 |
NA | Tcr_0730 | positive regulator of sigma(E), RseC/MucC | chromosome | CDS | 802746 | 504 | + | 0.430556 |
NA | Tcr_1851 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 2026630 | 1863 | - | 0.393988 |
NA | Tcr_1888 | diguanylate phosphodiesterase (EAL domain) | chromosome | CDS | 2064862 | 1203 | - | 0.416459 |
NA | Tcr_1504 | SH3-like region | chromosome | CDS | 1630840 | 675 | + | 0.376296 |
NA | Tcr_0165 | Hpt domain protein | chromosome | CDS | 195568 | 354 | - | 0.392655 |
NA | Tcr_0753 | hypothetical protein | chromosome | CDS | 823763 | 282 | - | 0.429078 |
NA | Tcr_0777 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 850912 | 2139 | - | 0.411407 |
NA | Tcr_2008 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | chromosome | CDS | 2211915 | 2112 | + | 0.434186 |
NA | Tcr_1613 | CheD, stimulates methylation of MCP proteins | chromosome | CDS | 1767604 | 576 | - | 0.413194 |
NA | Tcr_0754 | response regulator receiver domain protein (CheY-like) | chromosome | CDS | 824075 | 363 | - | 0.407714 |
NA | Tcr_0769 | response regulator receiver (CheY-like) and ANTAR domain protein | chromosome | CDS | 839956 | 645 | + | 0.418605 |
NA | Tcr_1064 | hypothetical protein | chromosome | CDS | 1139443 | 828 | + | 0.410628 |
NA | Tcr_1089 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | chromosome | CDS | 1170767 | 2004 | + | 0.398204 |
NA | Tcr_1021 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 1099052 | 903 | + | 0.45072 |
NA | Tcr_1580 | hypothetical protein | chromosome | CDS | 1728628 | 1020 | - | 0.371569 |
NA | Tcr_1714 | UspA | chromosome | CDS | 1874715 | 453 | + | 0.452539 |
NA | Tcr_0152 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | chromosome | CDS | 183549 | 1899 | + | 0.445498 |
NA | Tcr_0106 | serine/threonine protein kinase | chromosome | CDS | 136378 | 1365 | + | 0.415385 |
NA | Tcr_1243 | transcriptional regulators, TraR/DksA family | chromosome | CDS | 1358730 | 429 | + | 0.41958 |
NA | Tcr_0500 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 559229 | 1377 | + | 0.42992 |
NA | Tcr_1446 | sigma54 specific transcriptional regulator, Fis family | chromosome | CDS | 1563701 | 1101 | - | 0.414169 |
NA | Tcr_0470 | two component transcriptional regulator, Fis family | chromosome | CDS | 527184 | 600 | + | 0.416667 |
NA | Tcr_0542 | histidine kinase | chromosome | CDS | 607345 | 1308 | + | 0.422018 |
NA | Tcr_1444 | two component, sigma54 specific, transcriptional regulator, Fis family | chromosome | CDS | 1561137 | 1380 | - | 0.426812 |
NA | Tcr_2144 | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA | chromosome | CDS | 2364715 | 2160 | + | 0.449074 |
NA | Tcr_0004 | two component transcriptional regulator, winged helix family | chromosome | CDS | 4046 | 672 | + | 0.447917 |
NA | Tcr_1999 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 2199589 | 1218 | + | 0.436782 |
NA | Tcr_0755 | CheW protein | chromosome | CDS | 824494 | 531 | - | 0.451977 |
NA | Tcr_1143 | diguanylate cyclase (GGDEF domain) | chromosome | CDS | 1238105 | 1599 | - | 0.382739 |
NA | Tcr_0759 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 828565 | 1221 | + | 0.44226 |
NA | Tcr_0323 | conserved hypothetical protein | chromosome | CDS | 361477 | 783 | - | 0.408685 |
NA | Tcr_0906 | nitrogen metabolism transcriptional regulator, NtrC, Fis Family | chromosome | CDS | 983948 | 1464 | + | 0.45765 |
NA | Tcr_1329 | hypothetical protein | chromosome | CDS | 1443972 | 459 | + | 0.429194 |