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# Pseudomonas fluorescens PfO-1, PfO-1

>Pfl_0637 PAS/PAC Sensor Signal Transduction Histidine Kinase
MSSGDKLFDRLLNRQTSTPPAVMDDPVVPGVGLQLHLDGEGQVIHLTGPL
RHVLAQQLSAARTPHLLDYLLPHSALAVEGVPADWQGQLLDLDFFSLAGP
PLHLRGWVQPQGDGWVLQLLDIGDLLSERRQAHSREQCQWLAAHIRDHLR
LCGLARLPQVLGEQLQCLSQRFQVPCLAVALLDEETEGWQIHQHYSAPDA
PRLWDMAQRLGTGLDSLNGAAPQRVLPAEHPRLSSVFGPAEGFAVPYRDA
HGVAAWLLFGCFSAQPHTAELSDHDWLQLAAAVAAPLLERLREHRHHLQL
ERLEILQSLLGTGWWEVFSDSAEVLLADALAVSLGLSAGRLPIQAWFARV
HPADREELRSRLQALQDEGQALELCVRLQPVDQAQPQWFRLQGQSLGIGA
ERRLVGFMLDISDIKNQQQQAAAAHARLDNLIASAPAVIYVQRYVEGALQ
PTFFSASLQPLLGWSLADCADGALVNHVHPDDRAAYFERTRQLLREGSVS
TRYRMLDTQGNTHWLLDEAKLLRDDLGLPVEAVGLWLDVTDATLAAERIK
TSEERYRILVEDSPAMICRYRPDLTLTFGNRPLAMYLECAPEQLPGVNLG
SWMSDEQREAFVQRLAQLTPDAPVSSAEINLRLPGREHAWWIWSDRGVFD
EQGRLLEVQAVGRDNTEVRRSQQQLTQSAKMATLGEMATGLAHEINQPLN
VMRMAIVNVLKRLGNGDVQIDYLTDKLNRIDTQVQRAARVVDHMRVFGRR
SEIEQHPFNPLDAIEGTLSLLSEGLRGKGVELRIGEANFQLQVRGYVDQL
EQVLINLMVNARDALLSKRESNRDFQPWIAVHAEHDEHVVRLWVEDNGGG
IDPRLLERIFEPFFTTKPVGVGTGLGLSVSYGIVENMGGRLSVRNGDDGA
RFCIELPIALDDQITSVARPD
>Pfl_4840 Two Component, Sigma-54 Specific, Transcriptional Regulator, Fis family
MNTSPRQKILIVDDEPDIRELLEITLGRMKLDTFSARNLEEAQALLHRET
FDLCLTDMRLPDGTGLELVQHIQQRYPQLPVAMITAYGSLETAINALKAG
AFDFLTKPVDLTRLRELVGSALRMPAPGNVCTSIDRRLLGDSPPMRNLRK
QIDKLARSQAPVYISGESGSGKELVARLIHEQGPRASQPFVPVNCGAIPS
ELMESEFFGHRKGSFSGAVEDKPGLFQAAHGGTLFLDEVADLPLPMQVKL
LRAIQEKAVRSVGGQQETVVDVRILCATHKDLDAEVAAERFRQDLYYRLN
VIELRVPSLRERREDIEALAGHMLKRLANGTGQPAARLHPHALEALKNYR
FPGNVRELENVLERAHTLCENRTIEAEDLRLSEGNGAAEAGIADLTQIDN
LEDYLESVERKLILQALEETRWNRTAAAQRLSLSFRSMRYRLKKLGLD
>Pfl_3135 Putative Anti-Sigma-regulatory factor (Ser/Thr protein kinase)
MTVRSSGTQPINIEQDVVLARQTARKLATECGMRLIDLTKLVTAVSELAR
NTMVYGGGGDMDWQILDDNHKVGLRLTFRDEGPGIPDIKLAMTDGWTSGS
GLGLGLTGAKRLVDEFELDTEPGKGTRITITRWT
>Pfl_0199 Transcriptional Regulator, Crp/Fnr family
MDKVWRERLLTGQWFSHLPSSFQDSLLAAARERRLAAGQRLFQRGDAPCG
LYAVLDGAVRIGAVSEQGKEALLSLVEAPHWFGEICLFDGQPRTHDAYAV
GPCTLLNIPQATLLKLLDEQPVYWRHLALLMSHKLRLTFINLEQLSLLPA
PARLAHRLLMIAEGYGELDPPRRVLQLPQEQLASMLSLSRQTTNQILKEL
QGQGVIGLSYGEIEILDAARLRALATL
>Pfl_2891 Periplasmic Sensor Signal Transduction Histidine Kinase
MFRILFRLYLVTIVSYSAAIYLVPDLVVMVFKQRFVTYNLDYSRGLQSLI
TKQFRAVPQDQWPALAASMDKDFQPLHIVLARIDDPGFTAIEQERLRRGE
NMVRVGDWGWRTLAVTPLNDEMAVQMVVPPDPMDVNLLYWSINVLIGASL
LACLLLWFRPHWRDLERLKGTAERFGKGHLSERTQIGPSSNIGSLAHVFD
TMAGDIENLLNQQRDLLNAVSHELRTPLTRLDFGLALALSDDLPQASRER
LQGLVAHIRELDELVLELLSYSRLQNPAKLPEQVEVSLDEFIDSILGSVD
EELESPEIVIDVLLHNQLERFSLDPRLTARAIQNLLRNAMRYCEKRIQIG
VQVCPKGCEIWVDDDGIGIPEDERERIFEPFYRLDRSRDRATGGFGLGLA
ISRRALEAQGGTLTVEGSPLGGARFRLWLPTPT
>Pfl_3355 Histidine Kinase
MTSIRRRTLTLIIGLMLAGLTVLSLFNLHDSNHEIAEVYDAQLAQNARLL
QGVMRMPLQGQEHADLYRAFNSALAEAVPKGDGHPYERKLAFQVWNAKGE
VLVHTASAPSFSTPPIQPGFSDVVDLNKRHWRAFVLEDRQNGLRIWVGER
GDVRADLVDRIVRHTLWPNVIGSLILAAMIWLAIGWGLKPLANMAATLRA
RHSGSLEPLQLTPLPSELEPMQAALNRMLAQIQEVLGRERRFIADAAHEM
RTPLAVLRVHAQNLLEAGTEQERRESLEFLIAGVDRTSRLVNQLLTMARL
EPKASAPAKQRIDLGDTVRNSLVQLTPWLLSKHLELAFDVNDQPFPVLAD
AATIDIALNNLITNAANFSPEQGVISVQLTRADGLYHLSVEDQGPGIDEA
DRARLFERFYSRGNPQGAGLGLTIVNTIATRLGGRITLENRVEGGLRATL
SIPAG
>Pfl_2251 PAS/PAC Sensor Signal Transduction Histidine Kinase
MRIDMTNEQERVIEDGPDRGSDATMPAPGVDSIIDSIPAMVAFMTPSGEL
EQVNRQIMDYIGAPLHELKKWQAGETVHPDDLPSVIAAWMHSVSTGTPYE
IEHRIRRADGVYRWFHVRGLPIRNSEGTITRWCVLQVDIDERRRDKALIA
SALAEVSASEERLRGIIDAVPGFVWSASPEGNVGFVNQRWCDYTGMSVEQ
ACGDGWTASIHPDDAPGLGGYWQALLQSGSAGEYEARLKRFDGIYRWFLI
RAVPQRDDTGRVVRWYGENTDIEDRKRAEVFLAKAQRLSATGTFSWRVST
DEITWSDEVYRILELDPDTPPGFEAIYRRVHPDDISSHREMIKRQRRKGR
DFEHEHRLLMPDGTVKYVRLVAHSIAHAPDGFEYIAALQDITQRRLAEEV
LSKARSELTHLARVASLGAVTASIAHEVNQPLAGIITNASTCLRMLGADP
PNVEGARETARRTIRDGNRAADVINRLRALFSKKSITIEDVNLNDAAREV
IAMLLGELQRNGVVLHPQFAEALPLVRGDRVQLQQVILNLIMNAAEAMSA
IHGRPRQLIVSTDLGSDENVYLAVKDSGNGVDPQDIERIFNAFYTTKSSG
MGVGLSISRSIIERHDGKLWASANDGPGATFTFAIPHSTDLPQTDNRDLA
DRTVEND
>Pfl_3305 extracellular solute-binding protein, family 3
MKRFAACLLSMLALTANAADLQLLTDNHPPLHFMQGNQLAGFGVDVVQAL
ATQTGDRIHLQQVPLLRALRMASDTPDTGVFTVLRTDERDDRYQWVGPLI
EVETALYARDNLQPPVHSLREADHLGRITVPRKWLVYSYLQGQDLNNLYG
VETPEQMMRLFSLGRTDFVVSDTWSKAALAREQGMEPGRLQYQIPLMKQN
TYIAFSPQTDPKQVARWQQALDTLRADGRLEQLRQRWLSNNLPR
>Pfl_0529 chemotaxis sensory transducer
MPVGRHDLCCDSVYKSAIKLMASEVEGFKVSAVLSLLQSRLLRPVFVTLG
IALLVQVLVAVALTRSTVTALEADLGTRLGADSQKLSGELEQAGREVTSS
LDNLSSSTRQRLTAGLSSRLKEEQAQLRATLEKDLKDSANDMAQLLASVA
PRAMWDSDVPTLSEFARRAQRNPNVLFVVYDDATGQHLTRYLNRENPINK
ALLEKGQGERALDKVLDAAKNDPSVYYLEASINPNGVEIGKVLMGVSTAS
VETDLAALDQRFSALIASSDQLVGDSLKGAAADSATAMQARLQSAQSTAA
EMKANTTSTVQDAAATLRWRIGMGLALVGAGVLLLLAVVLGHRVVNRLKM
LNAAMDDLAAGEGDLTKRVQINSKDEIGDMASAVNRFVDKLQPIVREAGD
VAQRTGVEIGAMTLRNAGADAAAGMQRDEVAESLRALSQMADEAQSESHA
MQAALKQVVDIRQATDENTRTSAKVGSLIEALAGQVDTGAKVIERLAQQS
EQIEVVLTVIHGIAEQTNLLALNAAIEAARAGETGRGFAVVADEVRALAS
KTQSSTGDIQAHIVALQQGAREAVEAIGQAGRQASEGLLVLRDSARLQQS
VQASVEQVHAAIGLATQAAAHQAQGAQAVRGRVETIHAQAEKAAQAVVET
TASGKVLDGLAAQLKASLGQFRA
>Pfl_4839 Signal transduction histidine kinase, nitrogen specific, NtrB
MIAEADNADSKQAQRLLRLYHLYRLSVGITLVLLISSNMDNRLLTSANDE
WLRNGSWLYLVLNILLVVFLENIRRPAQLFGLALVDILLLCGVFYAAGGV
ASAIGNLLIVSVAISNTLLRRRIGLLIAAIATLGIVGLSFLLSFSHPLSA
NDYLQAGTLGALCFAASLLVQGLMRRLEVSENLAEQRASEVVGLEALNAL
ILQRMRTGILVLDEQRRVQLANHSARVLLGQTHLEGDLIDEHSSALVERL
QLWLNNPTLRPQSLKIAGNGLELQPSFIALEQNPNRQTLVFLEDLAQIAQ
QAQQLKLAALGRLTAGIAHEIRNPLGAISHAAQLLQESEELDSADRRLTQ
IIQDHSQRMNRVIENVLQLSRRQQSAPQRLDLKPWLEQFVNESRERSGER
QHIHLHIGLGDFRTLMDPGQLTQILDNLLRNGWRHSALLHDPAEVWMTLF
IDPESTLAVLEVQDNGPGVPLDQQAHLFEPFFTTSSQGTGLGLYLSRELC
ESNQARLDFKSRQGGGCFRITFAHGRKQS
>Pfl_4653 Transcriptional Regulator, NifA subfamily, Fis Family
MSAKSLLTALLPLVSDLSRELPEGERYRRLLEAMRALLPCDAAALLRLDG
EWLVPLAVDGLSTDTLGRRFKVSEHPRFEVLLAGEGPTRFAADSDLPDPY
DGLVDGLDDHLEVHDCLGCPLFVDEKLWGLITLDALDPERFEPIELDALQ
AFASLASATVNAAERIERLATRAEDEHQRAEVYRQASGQQNREMIGQSKA
HKRLVEEINLVGGSDLTVLITGETGVGKELVAQAIHAASKRADKPIISLN
CAALPDTLVESELFGHVRGAFTGATSDRRGKFELANGGTLFLDEVGELSL
TVQAKLLRVLQSGQLQRLGSDKEHQVDVRLIAATNRDLAEEVRSGRYRAD
FYHRLSVYPLRVPALRDRGRDVLLLSGYFLEQNRSRMGLNSLRLNSDAQE
ALLTYTWPGNVRELEHLIGRSALKALGNCKVRPKILSLSAMDLDLPREVV
DNSPMPSEATAALPLISGDLRTATEQYQRQLISAALERNQDNWASAAREL
GLDRANLGRMAKRLGMK
>Pfl_2645 Response regulator receiver domain protein (CheY)
MSSPVSTILVVEDDAIVRMLIVDVLEELEFKVLEADGSEQALDILKDVNQ
HIDLMMTDVGLPIMDGRQLATEARNIRPALPILFASGYAETIEVPADMHV
IGKPFSIDQLRDKVKAVLECS
>Pfl_4292 Lysine-arginine-ornithine-binding periplasmic protein
MKKLVLLGALALSVLSLPTFADEKPLKIGIEAAYPPFASKAPDGSIVGFD
YDIGNALCEEMKVKCQWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKS
VDFTNKYYNTPARLVMKEGTQVSEGLAELKGKNIGVQRGSIHERFAREVL
APLGAEIKPYGSQNEIYLDVAAGRLDGTVADATLLNDGFLKTDAGKGFAF
VGPAFTDVKYFGDGVGIAVRKGDALKDKINTAIAAIRENGKYKAIQDKYF
DFDIYGK
>Pfl_2648 CheB methylesterase
MNSAADLPRVEAIVVGASAGGVEALLTMLGSLRAGFGLPIIIVLHLPEER
RSQLAEVFARRVALPVAEAIDKQDITPGTVYFATPGYHLSVEQDFSLSLS
LEDRLHHSRPSIDFLFESAADAYGPALAAVLLTGANHDGARGLAQVKRLG
GLTIVQDPDEAQVATMPRAALKTHQPDYILPIHGIGRLLVELERIAC
>Pfl_1252 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MEWLGLQFVAEQPESGQVILNCTHNPLLVLVAYLVACAASFATLDMAERV
AHAEEPGSQRIWRWIGATCLAGGIWAMHFISMLAFQAPIGIQYDLPVTLF
SLVIALLASWLAMHTLSTPQPSLLQYLKTAIVIGLGIAGMHYVGMAAIES
AASAYYDPTLFLASIVIAIGASFAALWVAGYLREGSGLHIQMLKYVAALI
LGAGILSMHFTGMAALQLVLPEGQLPTLASQTSHLQLGLTVALITLLILG
SAISAALADKKLQNKEHDLRRVNALLSQLDQARMSLQHVANYDALTNLIN
RRGFNQIFAEKLSQKTSEGGMLAVMFLDIDHFKRINDSLGHDAGDELLKV
IAQHIKGSVRSHEDVVARFGGDEFCILIGLRDREEARNLAQRIMLKMKEP
IELAGRRMVMTTSIGISLFPEDGSTCDELLKHADLALYQSKGAGRNGVHF
FDSNLKNRASLELQLEEELRHALRQENGLLLYYQPIFELKTGKVTKLEAL
IRWQHPVHGLLTPDRFIAIAENNGLIAELDNWVLRKACEDLGELSRHGCE
ELKIAWNCSPLNLAREELANEIEHALRSAGVAPERLELEVTENALMGNIA
NTLVLLRQIRALGVSLSIDDFGTGYSSLAYLKRLPLNTLKVDRSFILDIP
KATADMEIVQAIIVMAHTLHLQVVTEGVESLEQYEFLERSGCDFIQGYLL
SRPVPLAELRPVLEEINQRKHAHAVNPLSLARGTFAPVSLDPSAKSLVPH
AGASVVRPIR
>Pfl_5389 extracellular solute-binding protein, family 3
MRFLPGLICLLPLLSPLAHAELIDDVNDRGELRIALEANTPPFNFKDGDT
LTGFEVELGQLLANELDVRADFIVTDEADLLQGVESGKYDVALNHIALTP
ELKDRFDVSEPYTQVNAQLLAKKDEQPRPMVLVQTLTEEKPKIGPPVELA
IPFQKGNPAFHASLENALQRIRADGRLEALSKKWLSVQATEN
>Pfl_3344 UspA
MVLKLKRILLIAPGEMTQTPAFERACALALANGALLHIVAFDYVPVLAAA
GLFAPEAMAQAREGYLQVHRHWLEQQARFKRCIGLNVTTEVVWARSNLAH
VLEYVQDFHPDLVIKDTHYVPALDRAFHRPLDWRLLRECPAHLHLVTSAG
HARPMKILAAVDLSHLEELTQGLNDRILDLACTLAAGCGAALHLLNVGCW
AVIDDGAISVPTGSLDGSLKDAIEDAQQEAFEALAERYGIQSSCRHLLTG
IPQKVIGLFARQHAFDMVVLGMLYPDGTHRFIGSTVESVLNQAPCSLMIV
KPPQPCE
>Pfl_3957 Two Component Transcriptional Regulator, LuxR family
MTCNLLLVDDHSLIRAGVRALVLDIPGYAVIGEANDGSQLLEMVELLSPD
IVLLDISMKETGGLEALQRLRRVRPHAKVLILSMHTDPALIMQALESGAH
GYLLKDTTATELEHALEALRNNERYLSPAIAHTVINQALTRNLKQQPEVA
ESHNLTARQLEILRLIVRGKSTREIANGLGLSIKTVETHRSQIMKRLQIY
DVAGLVLFAVREQIISLDD
>Pfl_1543 Hpt domain protein
MADTHVDHEALSALREVMEDSYPELLDTFLADSENRLRELQQTADADALS
SVAHSFKGSSSNMGATRLAVLCQELEQHAKDKSPSEIIKLVADIHSEFAD
VRPVYVAERQRSLTH
>Pfl_4883 Carbon starvation protein CstA
MKNNNSLLRHLPWLLLAIVGACALGVVALRRGEAINALWIVVAAVAIYLV
AYRYYSLFIANNVMQLDPRRATPAVLNNDGLDYVPTNKHILFGHHFAAIA
GAGPLVGPVLAAQMGYLPGTLWLIAGVVLAGAVQDFMVLFMSTRRNGRSL
GDMVREEMGRIPGTIALFGCFLIMIIILAVLALIVVKALAESPWGIFTVM
ATIPIAMFMGIYMRYIRPGRIGEISVVGVLLLLGSIWLGGQIAADPVWAK
AFTFTGVQITWMLVGYGFVAASLPVWLILAPRDYLSTFLKIGTIVALAIG
ILVTMPELKMPALTQFVDGTGPVWKGGLFPFLFITIACGAVSGFHALISS
GTTPKLLDNETNARYIGYGGMLMESFVAIMAMVAASVIEPGVYFAMNSPA
AVVGGDVVSVATAVSNWGFAITPEALQAVAHDIGETTILARAGGAPTLAV
GIAQILHSVLPGENTMAFWYHFAILFEALFILTAVDAGTRAGRFMLQDLL
GSFVPALKRTESWSANLIATAGCVAMWGWLLYQGVVDPLGGINTLWPLFG
ISNQMLAGIALMLGTVVLIKMKRQRYIWVTLLPATWLLICTTTAGFIKLF
DANPAIGFLSLAKKYSDALANGQVLAPAKSVEQMQHVIFNAYTNATLTAL
FLFVVFSILFYALKVGIAAWGKKERTDKESPFQALPDA
>Pfl_2049 Putative diguanylate cyclase (GGDEF domain)
MGRTGGKGLSLARRLYASRILGLVLGLLCVSVAMYPLDPPAWVWALMLFN
GLVWPHLAYQWARRAKVPYHAEHRNLLIDAFLGGFWVAAMHFNPLPSATT
ISMMAMNNVAIGGLRFLLAGAAAQLLGVGVGLVVFAPAFVPMTTPAQLYA
CLPLLTLYPLALGWICFRQAYTLGLHKRELLALSRTDSLTGLLNHGAWKD
QLEIEFERCKRQQTGAAIALIDIDHFKAINDTYGHVAGDIVLRQLSKMLK
QNLRMADVAGRYGGDEFCVILPDLPLFNAAQAMEALRERFSFLVYEQNPA
LKVSLSIGLAALDPAHGDATRWLDDADQALYEAKAGGRNRVICCSDNNPR
REVFDSV
>Pfl_5308 Response regulator receiver domain protein (CheY)
MEQQSSALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADH
HPGIIFVDIMMPRLDGYQTCALIKNNNAFKGTPVIMLSSRDGLFDKAKGR
IVGSDQFLTKPFSKEELLDAISAHVPGFAAALPQ
>Pfl_3934 Periplasmic Sensor Signal Transduction Histidine Kinase
MMSLRLRLSLTLGAAFALIWALAAAWMLSDLRNQMMFSLDQRLVASARMV
AGLLEQLPAVPSKGEGTHFSAEQLNIPGGMACQVSSLRGEILARSHNNPE
QALEAQKMGFHDQMIDGAPWRSFTLARGDVRITTADRVIEREALNMSILL
AASVPVGVALLGCLCLLWLGIGQGLAPLNRLREALMRRNADSLEPLQLQS
FPSELKPLLETQNQLFQRIGKTIERERRLTGDAAHELRSPLTAIKTHLQV
ARMTDGSARDQSLARAEEGADRLHRTLEQLLLLARVEGSLSFDDGVQCSA
EQVAKLAIQDSASDQRQRIRLHLPEHLSAAPLQMPAVLSIAALRNLLDNA
LRHTPTDGAVDLSLETSANRVRFVVRDHGPGIAPDDLQHLTQRFWRNGQS
TGCGLGLAIVQAIVQRCACTLHFDSRPDGLRVELTMPLQPV
>Pfl_1052 chemotaxis sensory transducer
MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLKIEASENSVRDDAIPGV
YYSSMIRGAWVDSYLQTQELLGLKEGQGISSEDAADYKAFESRLQEQMAN
YRGTVVTDEDKLEFAAFEKYHDAYLKIQDAVLDLHKRNLEADAVKLFHEQ
LTPTWYSGRMKLNDIISENKRVADQAMANIDEAVAAAKVSMFVSLVVAVL
AAGFCGLLLMRAIMAPMNRIVQILDIMRTGDLSSRLNLERKDEFGAVETG
FNDMMTELTSLVSQAQRSSVQVTTSVTEIAATSKQQQATATETAATTTEI
GATSREIAATSRDLVRTMTEVSTAADQASVLAGSGQQGLARMEDTMHSVM
GAADLVNAKLAILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGE
YGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEE
VRRGMAEVQQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINHAL
VQLGDASSQTVESLRQASFAIDELSQVAVGLRSGVSRFKV
>Pfl_3785 Putative FecR
MMDTRDCACGQTTVRDDAARWFVRLQEPAVSADEQQRFDAWLNEHPQHRD
EFQLLQGLWSAADLLPAPRLKALCETPPARRERRPLLRYAVAASVVAVAL
GLGLFSGLNHPQGYSAEFATALGERKHVALPDGSMIDLNSRSRLQVRFEK
DRRLIELTEGEAMFSVEHDTSRPFVVEAGSGKVTVTGTRFDVRRDVTQTR
VAVEQGTVKVQGRDAADADFISLTAGLGTRVDAQGKVAPAYAVTPAELTA
WRSGRLVFNNASLSEVVEEVSRYRDKPLKVANPAVANLRLTSVFKSDNTD
ALLKALPSILPVAVRTLADGSQEIISK
>Pfl_2455 Response regulator receiver domain protein (CheY)
MFHSAIVSVVDDDELVLVSMDSLLRSCGYTVKTFNSAFAFLESSAPEQTG
CLISDIQMPGMCGVEMYEALAARKIHIPTIFITGKPGLPPEFSARVKTPE
GYFSKPFHTGALLACIEQALMRRR
>Pfl_3881 UspA
MPYHHILVAVDLTEECDPVIHRARELSVSNGAKLSLVHIVEPMAMAFGGD
VPMDLSQLQQQQFDQAKERLERLKHKYTELEGANCHLTYGQPRQEIHHFA
KEQQCDLIVVGSHGRHGLALLLGSTANDVLHGAPCDVLAVHLVKR
>Pfl_0048 EAL
MMVATRETLRSWFYRPWFLAMIAAVLSASLLITGGLFVAMRQVEQSESQE
MNAQGERFLARLEQLFGQLRESLDDLEAQPLRSCDDEMIATLQQVTFNYR
FVYEAAYMDATRICSNRPRQEGLSVIRPPDIKGPTYSYWLNTTTEPDENR
AALMLGRGNFRVATSRGHLTDMVDLSPGSSLLVVLDHGTRAIPVLGVPQA
WPPTEPWPPKTPNALQVTQSHLIYRMPTDNPEYQLVLISPRTGMHIPELW
WWMVPFCLVLGAFVGVLVFWIVRQRQSLDAELHGAIRRGELQVLYQPIFD
LDSRNCVGAEALLRWRRPDGTLTSPDLFIPMAENTGQIRQMTDFVLQRLL
EQLGQLLRANPQLYISVNLAACDVMVPRIGQVMARLLTLHRVAARQIAFE
VTERGLIDVVVARENLQALRDVGHQVLIDDFGTGYCSLAYLQTLPVDCLK
IDKAFIDALGHDAASSGVAPHIIHMAQALDLKVIAEGIEFESQAALLSSE
GVKFGQGWLFAHALSAVQFIELITRGRRLAGRRLDDEA
>Pfl_4515 Two Component Transcriptional Regulator, LuxR family
MNKVLIVDDHPVIRLAVRMLMERHGYEVIAETDNGVDALQLARDQMPDIV
ILDIGIPKLDGLEVIARLTTIAMPLKVLVLTSQSPGHFSMRCMQSGAAGY
VCKQQDLTELLSAIKAVLSGYSYFPNQALHTVRTSLGNASEADMVDRLSG
REMMVLQQLARGKTNKEIADGMFLSNKTVSTYKTRLLLKLNARSLVDLIE
LAQRNGLV
>Pfl_2647 MCP methyltransferase, CheR-type
MERSNPVERNSEIELRLLIEAIYLKYSYDFRDYSGASIKRRVQHALSQFE
CATISALQEKVLHDPTAFMQLLQLLTIPVSEMFRDPSHFLAIRQEVVPLL
KTYPSIKIWIAGCSTGEEVYSMAILLREEGLLDRTIIYATDINPRSLEKA
KQGIFSMENVRAYTANYQQAGGQRSFADYYTAAYGYAIFDKSLCENVTFA
DHSLATDSVFSETQLISCRNVLIYFNKKLQDRAFGLFHESLCHRGFLVLG
SKETLDFSGYSNQFEPLVKQERIYRKS
>Pfl_1912 Carbon storage regulator, CsrA
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKNVAVHREEIYQR
IQAGLTAPDKPQTP
>Pfl_0050 Putative diguanylate cyclase
MSDEAQRWKEKYLKSIEQQEKLERRWDARLDLLRRGLVRSTLAAEGTDRV
VDQCMKEMRDVVRTDDMDAGLAALLPRLEKAVLDSEQRRETRIEQVSTAL
TALVTQLQSLPLPREVAQPLKKFAKQLDGRVSQAREMPLLLSELSGLQGK
ALSQLATPTEPGRPGLLQRLFGSRDSEETPAQVAQAPAVTPSVQPEQPPV
THEAVPAPQAPVTSAEQVATAPVSPALIAAPVAEPSKAPEPIPEDFTEPE
VVAFEPARILTEAPSAPSEPEPVEPESKLQPFTPPPVFAPAVPTAINPDE
LILPGDTPPPVILDSLPLPEPIAQALAAIDPEQSEHDILYALPDSPEPSY
SSVARHIEDTLIGLLDDLTLPERHRPQAEAMRDRLKNGLNWYELLPILDD
LATLMLAITDSGQHEFEAYLQQLNERLEAFQSNLQAASEGHADNSSAARA
MDTQIREQVDGLQTSVQEAADLNDLKQVLENHLEGLLGTMDQHQKQRDAR
EQEVAGRLKSLAERVAHMEQEALGYREHLEEQRQKALIDPLTGLPNRAAW
TERLEHEIAQWQQHGNTLSLAMLDLDHFKRINDNYGHLAGDKVLKIIATV
LRKRMRGNDFIARFGGEEFVLLLPATPPAVGAKLLENLRASIEACPFHFK
GERVTITISMGLAAFRPGEHSDLVLKRADQALYRAKNAGRNRVELG
>Pfl_3625 Heavy Metal Sensor Signal Transduction Histidine Kinases (STHK)
MKPASLSLRLGLTVSILGALLVVFLAILAYFALTHELNALSRDSLEKKLE
QVEHSLTLYFDTGEISAKPHILLDQVMGHDNLTLTIYDLNNLRTPLLKSG
SGLTDPRVELKAVRATTDQLTHTDSADAEGAKFLTVSKLIRLKDGSSVPV
LLSMDNAHDQALLSAYLRSTLMALPLLLVFIGLTAWGAVQRGLAPLREFR
KVAARVTTQDLDHRLSVLNMPQELSELAQGINVMLDRLDSGVQQLSQFSD
DLAHELRTPINNLMGKAQVTLSRERSVEEYTNVLVSCTEELERVARIVSD
MLFLAQASQPAAHASFEPIALEEEASRVADLFSLTAQDKQIDLKIIGSAQ
VSGDRLMIQRAISNLLSNALRHCPSGKTVSLFIERAPNEVSLRVSNPGAG
IEAQHLPYLFDRFYRVDSSRTRSQGSTGLGLAIVHSIMTLHQGSAQVQSR
PGAMTIFSLVFPVTHPERH
>Pfl_0471 conserved hypothetical protein
MQLSDLKNAGRTPSLPLTVSLADAAGAADLQLLSLLRVLPGQRYVGAGVW
RGRAVLAKLLVGSKAARHFQRELEGVKLLAAQGMTTPLLLADGLKDGEGG
WLLFEFLEGAESLGDAWSKVESLPVLADEQSAVLAEALGAIGQLHGKGLW
QEDLHLDNLLRHGGQLYLIDGAGICAENAGQPLSRQKVLENLGVFFAQLP
KSLEPFTEELLVYYLLSNSEHALPLEALQKQIDKVRAWRLRDYLIKVGRE
CTLFSVKRGAFALRSIRREEEAAMLPVLEQADALLDQGHLYKTGGAASVG
KVEVAGRALVIKRYNIKNFAHWLKRFWRPSRAWHSWREGNRLAFLGIATP
KPLAVLETRFFWLRSKAYLITEHLAGPDIIERFAPYVESGEAPEAELQAL
DQLFARLIAERISHGDFKGHNLFWQEDRWALIDLDSMCQHGSLGSFAPAY
ARDRARFMRNWPENSALYQVIDQRLPKDVAGAA
>Pfl_3077 Sigma-54 Specific Transcriptional Regulator containing PAS, and Fis DNA-binding domains
MDAAMNTTESLKDYQRVRALAIRSLFEIIEQSSEGTVIVDRDANIVWMNE
RYARRFGLDSAAGAIGKPCESVIPGSLLREVVRTGRPILLDMQDTPKEPL
VVMRLPIHDDAGAVIGAIGFALFDELRTLSPMLKRYLSMQEELASTRSLL
RARQTKYNFAHFIGTSAASLEVKRRARRSASAESPVLLLGETGSGKELLA
QAIHGASPRAHKAFVSINSAAIPEALLEAEFFGTAPGAFTGADRKGRTGK
LQIAQGGTLFLDEIGDMPLPLQSKLLRVLQEKEFEPVGSNDVIQSDVRVI
AATSTDLEAAIKRGEFRADLYYRLNVLPIQVPPLRERLDDLPALSEAILE
ELRSQHELNREALELLGQHAWPGNIRELRNVLERAALLSDDLMLTADDIR
SAIGTFTPVERTLAPLPEPAINETFSQARERFDRQLIQSTLAQCGGKVIE
AAERLGLGRSTLYKKMIALGIAESQ
>Pfl_5306 CheW protein
MSESLTAFELLWQIDQRCRLLAADLPSQPARQDRWSGIGFRLGEHWYVTP
MGEVSEVLPELRVTQLPGVKPWVKGVANLRGRLLPVMDLCGFFGHELSPM
RKQRRVLVVEHQDVFAGLLVDEVFGLQHFEQDSFEPVSIRKRQGSKGEFV
KGYFRREQNWRVFSLFALAQSPSFMHVAV
>Pfl_3800 Putative diguanylate cyclase (GGDEF domain)
MVAPHNPVGYAHKKQGFRAFAPVVPAQDTLLPIPIHDPHQAPGGTLKRLP
LRKAAVLFIVAVCLCLSGLLYLQIEQSRRQDLANAQVSSANLTRAMAQQA
EDTFLAADLVMTSLVDWVQEDGYGAAQKPRLQRTFARRVQQLEQLHGMFL
FDREGQWVITSFPDLPRGNGVADREYFKFHQQNVSGVAHIGPAIRSRENG
EWIIPISKRVNDRAGNFQGVLLAGIKMSYFDKFFKSFSLDDNGTMFLGMT
DGTLLARRPFDESLIGTSLAKGEIYQKLLPNASAGTAMIDSVVDGVTRLY
GYRQLESYPLVVAASSSRDTILQGWYDRAFQSSVIVALVMLGVALFGWVF
IHQVRDGERIEKNLRKAQQALEQIATHDSLTGLANRRLFERSLEVEFARG
ARQSSPVSLIMLDIDFFKRYNDAYGHVAGDHCLTQVAQVVKNCCQRKSDL
AVRYGGEEFAVLLPDTDINGALAIAGQIRRSVMDKHITHSGSPTGYLTVS
LGCYAFIPTGNDSPELFIQRADAALYQAKNAGRNRAAVLSMDVGVGELMR
SDR
>Pfl_2459 Two Component Transcriptional Regulator, LuxR family
MNNNPISNNPSEPVVFIVDDDAALRESLGSLLRSIGLRVELFGSVAEFMT
YQRPDTLSCLVLDVRLQGSSGLDFQNELATAGINVPIVFITGHGDIAMTV
RAMKAGAVDFLTKPFREQDLIDAVCAAHSRDKQRRESGRHADELRARHGT
LTPREQTVMALAASGLMNKQIAGEIGLSEITVKIHRGQAMRKMGARSFAD
LVRMAEVIAALPAHR
>Pfl_3977 Possible Sensor with GAF domain
MIDLQQSGQGLEGYGMLAAQLESLLADERDFIANAAQFSAFLFNQLDDLN
WAGFYLNRNEELVLGPFQGQIACVRIPFGRGVCGAAAASLQTQRVEDVHA
FPGHIACDSASNSELVVPLVKDGRLIGVLDLDSPKLARFGADDQAGIEQL
AAIFLRLTDC
>Pfl_0328 conserved hypothetical protein
MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFA
QDENINGIATDIVREMFKRAGITYSLTLRFPWERVYKLALENPGYGAFVM
ARLPDREKLFKWVGPIGPDDWVMLAKADSKITLETLNDARKYKIGAYKGD
AIAETLTKQGLKPVVVLRDQDNARKLVSGQIDLWATGDPAGRYLARQDGV
TGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKDGVVDEIMGRY
L
>Pfl_5583 Transcriptional Regulator, Fis family
MFTQVPQPLLYAEALLAQFASLSRAADGAALLGDFVRGLAGLSGCELTQL
YLLDATHTSLGMNAECLDGVLQPRSAASLPADYNGEQLLQFALCQNRVVS
FDDLGGSLHETSFLPASSTPWQSLLCVPLVNQQKAVEGLLLCASRRHIDL
QGFADSLGQLGSFVLGQLHLLQRLRQPVDAAAPVVRSLPSASGYGLIGKS
AAMRQTYSLISKVLHSPYTVLLRGETGTGKEVVARAIHDCGPRRSQAFIV
QNCAAFPENLLESELFGYRKGAFTGADRDRAGLFDAANGGTLLLDEIGDM
PLSLQAKLLRVLQEGEIRPLGSNDTHKIDVRIIAATHRDLSVLVSEGKFR
EDLYYRLAQFPIELPALRQREGDILDLAKHFADKACTFLQRDPVRWSDAA
LEHLSGYTFPGNVRELKGLVERAVLLCEGGELLAEHFSLRLESAPAPEDH
CGLNLRERLEAVERNLLLDCLRKNDGNQTLAARELGLPRRTLLYRLGRLN
INLGDFDG
>Pfl_2762 GAF Sensor Signal Transduction Histidine Kinase
MVKHVTGMRFAAVARVTEKNWVACAVDDSIEFGLKPGDELVLESTICHEI
RQHRKPVIFGHASEHPVFSLHHTPSTYGLESYISIPIIKANGEFFGTLCA
IDSVPAHLDDPAIANTLTLFAQLIALSLDAQNNLEIAQAELVNAQEHGRL
REQFVAVLGHDLRTPLSAIRMSADLLETKTTDKRSLSLISAIRTSSTRMG
NLIENVLDFARGRMGSGIPIKRQLVDDLGNTLRLTLNEVQISHPRATFIE
LVDIPAGVYCDPLRISQLLSNLLGNAVTHGSLASPITVKADTEVDEIVIS
VTNQGPPIPPHLSPLLFEPFTRSEAGQRGEGLGLGLYIASQITTAHGGNL
SVVSTLESGTCFVARFPARLKCA
>Pfl_4552 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Response Regulator Receiver modulation
MKTPFPQTNRRILIVDDTPAIHADFRKILTPDTHGEADLNTLEQTLFGTR
QSPHLTFQLDSAYQGQEALKLVQNALDEGRPYALAFTDMRMPPGWDGLET
IEKLWAVDPNLQIALCTAYSDYSWEAMAERLEFGDQLLILKKPFDTLEIR
QMANALTWKWQLAQDAALKMLNLEQTIEARVHELLKVSRLLQYDSLTGLP
NSTLLGDRLTQSLAACRRHDKQLVVMFLGLDRFKRINNALGHPAGDEMLK
RVGQQLLACVRESDSVFRYGSDEFVVMLSDINHPQQSRSIAEKLLSAIRA
PQTIVGHDVSVTASLGISLYPDDGLEAIELIKKAETAMRSAKENGPNEIG
FFIEAMNQRAREQQSIESGIRQALQRHEFVLHYQPKIELASGRVVGAEAL
VRWQKPGHGWVYPSEFIPVAEDSGLIVPLSKWVLAEACRQTREWQQAGLP
PIRMSVNTSAIDFRQRHFVEGIEQVLAQTGLDPRLLELEITEGVLMQNVD
ATMSALNRLKALGVRLAIDDFGTGYSSLSYLRRFPIDVLKIDQSFIRGLS
HDSSDAALVGAIISLGKSLNLNVIAEGVETAQELAFLKDHHCEEGQGYYF
SKALPVDAFARLLASAQPGPWGVS
>Pfl_0288 Histidine Kinase
MLMTPTLPRRPRWRSLALLALCLAPLLWPLEHLAERYYRSELAGQNRQTL
DLYVANLLGTLHRYEVLPQILGDLPALRAVLGAPDDGVTQGNANRLLKNI
AAQTGAEVMYLMDTSGQTLAASNWDKHDSFVGRNFSFRPYFSEAMAGRLG
RFFGLGTTSAKRGYFFAAAVRNGEKIIGVLVIKVDLDHTESLWGKTPEQL
LVTDHNGVVILTSRPEWRFRATRTLSDAERSAITAIQPYPTREPRPLNLS
PTAWLPQTQDIAETGWSVSILAPRTLIDRPVRTVVAIGGATLLVVMLLLG
LMMQRRRHYLERIAFEAKARRELEGRVAERTSDLEGLNRRLKQEVLEREQ
AQQELVRAQDDLVQAGKLSALGTMSASISHELNQPLAAIRSYAENAEVLL
DHERTEDARGNLKLISELTGRMASIIAHLRAFARRDRHAPESVALQPALD
DALALLAKRRRSMDVELIRDLPAATLWVEAGETRLRQVLGNLLANALDAL
TEKGPPRKLWLSAESTDEGVNLYIRDNGPGFCMEALGRASEPFYTTKTRT
QGLGLGLAICETLMRAFGGELSFANHKQGGALITLRLRAGAPGVSLQPSE
DRSA
>Pfl_0122 Putative FecR
MPVDNLSLGRRAEPPQQVVRQAIHWLLRLRNNHGNPRLNRQCEQWRAEHH
DHELAWQRVQSLQAELTHNLRAVPGAQVAFNTLENSAQGLGRRQALKLLS
GALLMGSAGWLASDTSAWQQWSADYATATGERRGFQLPDGTRIELNTASS
VDLDYTAQQRLIRLTRGEIIVTCGGADAGAPIDRPLRVQSRHGSYEPFKA
RFILRQEDGCTRLSVTSGRVAIHSAGNSMEAIAGQSYLIDHHQIRPAPPL
DMDAGAWVDGLIVTRNMRLGDFLNEVGRYRQGFLSCASDIADLRLSGVFR
LEDTDKLLAILPQTLPVQLRYRTRWWVTLESVA
>Pfl_2907 chemotaxis sensory transducer
MSLRNLNIAPRAFLGFAFIALLVIVLGVFAVNRMSIIRQASLEMDSTQLP
SVTQLAVVTENVLRLRILSFRILVNRDPAGLQEAQTRIGVLVDKVRTAQA
SYAALPAGPQERALYQEFSTTLDNYVQAQNQMMELSRQDKLDEMRALINT
KIKDGTDKMGEQLNKLIAINAADAKTASTQAGEYYNSAITGIIAVSVIAA
LLTVLLAWLLTRSIVTPLNRAVAAAQTIAGGNLTKAIEVDGKDEPARLLE
ALAAMQTNLRKTIEQIAGSATQLGAAAEELSAVIEEASRGLQQQNDEIEQ
AATAVNEMTAAVEEVARNAVSTSEASNQSTHAAREGRDQVVKTVDAIQTM
THDVQNTAQMIEGLAAQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAG
EAGRGFAVVADEVRALAHRTAQSTQEIEKMVAGIQNGTGEAVESMQQSNQ
RTQTTLEMARAAGVALEQITQSIHQINERNLVIASASEEQAQVSREVDRN
LVNIRDLATQSAAGANQTSAATHELSRLAVDLNAMVARFVI
>Pfl_3041 Two Component Transcriptional Regulator, LuxR family
METFNVVIADDHPIVLLGVRELVERDRRFSVVGEAVCPDELIDLLTTWPV
DLLITDFNMPGDSRYGDGLKLVEYVTRHFPQVRVLVLTMISNPLILTRLQ
ELGVLSVIQKNQLHVEIEVALKAIAKGNTVRSKQPAPTSVLDNSADLDER
FARLSPKEHEILRLFVQGQGVNEIARGLNRSAKTISTQKVSAMRKLEVNS
DQELLAYCIERNLFN
>Pfl_2003 Periplasmic Sensor Signal Transduction Histidine Kinase
MQRLEEQKTSAPNLALAAIKSWGGQFNLLRWFSLASFFIIAAVALGLGYI
STRFVVTESVERDALLTAQFVQAIGDAEMRHANITPQRTMGEMLDPRQDE
NYPDVDPLSHAMARAEFLDHVEHLPDVLLATVYALDRTVIWSTNPELINV
KFEDDDELDESFEMKVPVSSSYHKIDDEKPEQRLSREPKYLFIENYIPMF
NADKSKVVAMVEIYKEPADLVDRIDRGFASIWAATILGGAAIYLGLFWIV
RRASTLLQSQQQQLISNETFVALGEMSSAVAHSLRNPLATIRSSAELAQE
IASPGAQRNIGDIISQVDRMSRWVRELLVSLRPMSDDGEAVDLLAAVEDT
LGAFDALIRRNGVEVRFTPQDCPPVVSQQVLLTQILNSLFANALEAMPRG
GVLSVEIETAQTGQVRMTLSDTGKGMSAQQQQLVFKPFFTTKQGGLGVGL
ALVKRIMERFQGSVMLTSREQEGTRVSLNFRVASGGEYGTQHSAGRG
>Pfl_4115 extracellular solute-binding protein, family 3
MLGLALLPGLSVAAGKCERLVVTGSPDAPPYLWQDPQNPKQLMGASADLL
QQVAKELGIKVDLLYAGKRSQALDEVRSGRMDMLADAPLTFNELENLDYI
HPPLLENDYLVWTRKGSTLVYTEARDLHGHTGGLSEKSRMTPAFGTFAEQ
QLTLTRTANLTQAFQKLLLGEVEYVLAGRYSGMAAAQALGMANDLLAFEQ
PIDRPGLFLAVSHNSACNDPWLRGQLAKKMTELPASGLTEAALQRNIERW
KAQQQQPPQPPVSAPKQ
>Pfl_0469 lipopolysaccharide core biosynthesis protein, putative
MAGWNLEPEYSDLAQHFGSLEAVFALQGERLTRDPLSEVIRVQLNGVNYY
VKRYVGAGKGLRRYLGKPRVKMEWQNLKRFAKWGIPTAEVVAWGLERNGM
AYDRGAMITRELPRTEDLSALAERNDPKLKDRAWVDGVSRQLAGYTRVMH
DHRFTHNDLKWRNLLIDDQAQLFLIDCPNGDFWRGFWLKYRITKDLACLD
KVAKYHLSNTQRLRFYLQYRQRDRLNAADKQRIRHVVRFFEGRE
>Pfl_4086 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MKQKRTLGTPRLLGIVWPFIAVVLFQALLGGVSLYVLSAVRGYVAGESLW
SKGQKDAIYYLNLYADSRDEAIYLKYQNAIAVPQGGHQLRLALDKQPPDL
QAAREGILKGGNHPDDVSSLIWLYLNFRHFSYLEIAIDRWTLGDAYLVEL
DGVAQEMHQRITANAATEADIRRWKDRIFAINDGVTPAAKAFSDALGEGS
RMILRLLLFTNLATALGLIVLALLRTRKLLKQRHAFAEALQLEKDRAHVT
LHSIGDGVITTDVSGAIDYMNPAAEALTHWKAEQASGLPLAALFNLLDDN
AQTEGLTLIEHILSGQLTGGSEHSKLIQRLDGSTVSVTLVGAPIRNAGKV
SGAVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEYRLEQALHNLT
RQAGRHALMFLDLDQFKLVNDTCGHAAGDELLRHICALLQSGLREGDTLA
RLGGDEFGILLENCAPEAAEKIAESLRQTVQNLHFVWKGRPFLTTVSIGL
VHVAQNPTTLEASLRAADMACYMAKEKGRNRVQVYHADDSELSLRFGEMA
WVQRLHMALEENRFCLYAQEIAPLGSAAGGTRGHIEILLRLHDEAGRMIL
PDSFIPAAERYGLMTSLDRWVVQNVFKVIAQCINDKCEGPLAMCAINLSG
ITIGDDAFLHFLREQFDNYGVPPEMICFEITETSAIANLGSAIRFINELK
GLGCYFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVE
VINHIGHVMGKQTIAEFVETAQIEQALLEIGVDYAQGYVVERPQLFTCDS
LQSRPARPQPLLFKAPGTFR
>Pfl_4666 Putative diguanylate cyclase (GGDEF domain)
MIASRTPTVPGTTGRSELLLILGSLLSVIAIVCIVTFLLIREHANAQESA
TRGATTIAQLIDADVLRTVELYDLTLQGLIAAAQRDDLKDVSPQIRHLAL
FDRSTTARFKGDILLLDKHGEVIADSSRVDPLPGNFADRDYFLAHAFNRD
TGMFISRPFKPRCDCDDADQWRISFSRRISSNTGEFLGVAVASMKLDYFD
QLFNSLDIGIDSTLNIINNDGILLAQKPYLQSDSIGKSFAARPNVVRILR
DSSGNGSFNSISSMDHQQRLYTYSRVGNLPLTVIVALSSEEVFGAWRRTA
ILISSATGVLCAGLLWLTWLLARELRLRQRAERELAQLAATDALTGVANR
RMLDQSLRHEWFRAQRSGKPLSLLMIDADHFKAFNDRHGHQAGDQALREL
ARVITTNVRRPADLVARYGGEEFSVILAETDSVGAQQIAEHIRAAVEQLS
SVNEDQSPMTVSIGISTWTATSEISLEQLLFAADKALYQAKEGGRNRVVV
A
>Pfl_4266 chemotaxis sensory transducer
MSWLNDARLSTKLITAFAACAFITLGVGLLGSRGVTELSTSLRSVFGNNL
VAVANIAQTKIKAVGQTRDMYRLYVATAANLPQSTKDEFLASMSANQLAS
EKAFAEYRKTKLADDERAAGDRMEKAWPVYQAIVQKYLALMKAGDLENGR
ELLLGDLQKNYRVVMDELTIMTNSNDMQVSEAAKRSVLTESSAKTSLYIG
IVLAFVAAILLGLFISRLISRPISKAVESARSIAGGDLTQNIVSTGRDEA
GQLLTTLAEMQGSLKGTIQQIANAADQLASAAEELTAVTDNGSRGLIRQN
DEIQQAATAVTEMTSAVEEVARNAVSTSEASQATSREAGNGRDQARSAVA
AINHATTEIATSTTMVKDLAEKVRDIGKVLDVIRGIAEQTNLLALNAAIE
AARAGEQGRGFAVVADEVRALAARTQASTGEIEGMINDVRNSADEAVGAM
GKSQALVSETQSLAQATGQALELIADGISQINDRNLVIATASEEQAHVAR
EVDRNLVNIQDLSTQTAAGAHQTSASTQELSNLAASFNTMVSRFRL
>Pfl_2892 Two component Transcriptional regulator, Winged helix family
MPNILLVEDDTALAELISSYLERNGYSVSVIGRGDHVRERARLNPPDLVI
LDLMLPGLDGLQVCRLLRADSATLPILMLTARDDSHDQVLGLEMGADDYV
TKPCEPRVLLARVRTLLRRSSLGEPMTANDRILMGNLCIDLSERTVTWRE
QPVELSSGEYNLLVVLARHAGEVLSRDQILQRLRGIEFNGTDRSVDVAIS
KLRRKFDDHAGEARKIKTVWGKGYLFSRSEWEC
>Pfl_1531 conserved hypothetical protein
MSLVLQRIEETRVALVGALAERNWEAIGQLDLDCRSCMEDVLSEASLDEV
ALRDNLEELLHVYKQLLEVAMGERQAIVDEMSQITQAQNAAKVYHLFG
>Pfl_4658 chemotaxis sensory transducer, Pas/Pac sensor
MKINLPVTGRNVDVAPDANILSTTDLTSAITYANDDFIRISGYSRDELLG
APHNLLRHPDMPAQAFAHMWQTLKGGRSWMGLVKNRCKNGDHYWVSAYVT
PVTQNGAAVEYQSVRTRPDTRQIAAAERAYAQLREGRVARWPRLPSLSLR
AKIMALTSSLLALVLGMEAWLRPESMGIEAAALVAGSGACALGVGWLLRP
LEHLTERARLIADNPLSQGIYTGRRDQFGQIEFALQMLEAQVGAVVGRIG
DASQRLAGHAAQLVDHLHSSHTSTLAQQAETDQVAAAIHQMAASVAEVAS
HAQQASVAADMAGTETREGHLLVGESRSAVLRLAEELGRATEVIHQLEGH
SIEISGVLEVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRGLA
QRTQQSTNEIQRMISTLQNGARDAVLVMQQSSEHVDNSVEQAQRAARALD
GISGRVEQITEMSLQIAAAVEEQSAVSEDINRNIVSIRTACELTVDEGRQ
SQLNSQDVAGLAGDLRSLAREFWGRRQGA
>Pfl_1354 Two component Transcriptional regulator, Winged helix family
MRVLLVEDHLPLAESVAQALKSTGLTVDVLHDGVAADLALGSEEYAVAIL
DVGLPRMDGFEVLARLRARGKNLPVLMLTARSDVKDRVHGLNLGADDYLA
KPFELTELEARVKALLRRSVLGGERQQRCGVLAYDLDTRRFTLGDELLTL
TSREQAVLEALIARPGRVMSKEQLAAQVFGLDEEASPDAIEIYVHRLRKK
LDGHSVAIVTFRGLGYLLESRDA
>Pfl_1418 chemotaxis sensory transducer
MTIRNLRIGLRASLCFAVLASLLVVVGLFGLGQMKTLRESAAVIEEAWMP
SIESIHDTAANIASIRLESLRLITSTQAAVRERSKGLLTAQRQELLKRLD
DHKALIANDQEQAMLEGLSADTAKYLSILDQIIKQIDAGQNDQAYARLTN
ELAPQGTVLDKTLEQMITLNQQGADTAAKSAAAMYQQALWIVAMIIVIAL
IATLLLAWLLTRSITAPINQALNVARRIASGDLSGRIDSNGKDEAAQLLI
ALAEMQSNLRSTIRGISESAQQLASAAEEMSSVMEQSTRGLQQQNDQIEQ
AATAVTEMSTAVDEVAANAVSSAEASEASNEDSKHGHVQVSETISSIQEL
VSAVLGASEQAEGLATQAQDISKVLEVIRGIAGQTNLLALNAAIEAARAG
EAGRGFAVVADEVRSLAQRTQNSTEEIELMISSIQQGTSATVGALQSSAE
QASHTLRRANSAGQALEKITASISQINQRNLVIASAAEQQALVAREVDQN
LVTIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVTRFVI
>Pfl_4382 chemotaxis sensory transducer
MALNGFGEPGTFLPLSQQLIHSRERPMFDSLSIRLKIVLLSGLCLLGVVA
LIVGINIYQTNQNDELVSTSSSKMLTASVQDLLQAKAAEQAVQVQKTFGE
SLLVITALADQVKDMRVMAAKRSLDAGALREELNQSLKTAFERNSKVLGI
WLAFEPNGLDGKDSEFANDAARQSNEAGRFASYWSRAAGPSLNTIMVEDD
MNKTTLSVSGTPYNSWYTCPRDNKRTCLLDPYADTVGGKEMLMTTISVPL
LVDGKAIGVVGIDIALDALQAAAVNSQRELFNSAGHMLIVSGSGVLGAYS
TDATKVGKGITETLGAEGKDILQLLSAGTPKILEQGDLIRAVYPVDPIGN
SRAWGVVIDLPKQVLLADSVKLQAVLDDAQQTGMITALAVAVIAGLIGLL
LIWLTASGVTRPINSVAEMLKNIASGEGDLTQRLNYTKKDELGELVNWFN
RFLDKLQPTIAQIKQSITEARGTADQSSEIARQTSEGMQVQFREIDQVAT
ASNEMSATAHDVANSASNAANAAKGADQSAKDGMSIIERSTRDINQLADE
VSKAVTEVEELAVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESG
RGFAVVADEVRNLAKRTQDSVEEIRVVIERIQTGTRGVVATMHSSQTQAH
NNAGQIRQAVDALGKISDAVTVISDMNLQIASAAEQQSAVAEEVNRNVSA
IRTVTETLTEQATESAAISSQLNALASQQMKLMDQFRV
>Pfl_2133 Metal dependent phosphohydrolase, HD region
MTQTLERAIAIAATAHAGQLDKGGAPYILHPLKVMLRMSSLEERIVAVLH
DVVEDCGISLEDLRKEGFSEAVLAAIEAVTKVPGESYEDFVERAAQNPIG
RVVKLADLEENSDLSRIASPSWEDLERIEKYRRAIGRLRA
>Pfl_0006 Periplasmic Sensor Signal Transduction Histidine Kinase
MNNQRRHESRVPSQVQRLFRQLVREWVWISLVLLPLTALLSWRAQINLHD
PVPLMGAGLSVAMVACVLGLLLWRPRLALWLTLGGIACVLLTSAGLAETR
RWWSPTPAALGMLFGYLIWNWRRLSVVLTYFGWELARLDSEPKVFPERRR
AQFPSADRLQGQIMALEQAMSRTRDTRRFIADGLEYLPVATLISDPRGEV
LLGNRKARNLFDHTLVGEDVLDQLASLGYPELSTEPRPPLSELPLLEFRD
HKERSLRLERAALLPVDGDIPIGWLLSLTDLSAERAAEEQRGVLLRFLSH
DLRAPHSAILALLEVHRHQTGTDSPLFEQIERQVRRALELTDGFVLLARA
ESEAYQFQPSLFGMLVMDVLDQALPIAQQKLIELSSDMDEQSHERLIMAD
QGLLTRALFNLLENAIKYSPAGSTVDLRVSCHDDWLRCELIDQGKGIAAE
ELPDLFSQYRRFSSAQGIDGVGLGLSMVKAVVDHHGGRIECVSVVDRGTT
FRLELPLIAEEQA
>Pfl_4451 Putative diguanylate cyclase (GGDEF domain)
MTHNAIQRLLLKRFALAAATYGLALLLLWLAYFTGHYEDSLAGVAVGSAL
VVISQAILFAVFFSGCNLRFSDPSLTEAQVLLGLGWQTWLIAHLEEARGE
FLVFYVLILLFGLFHLSQRAFVRCAMLVFFSFCAITLWDGYHLHLHDPAL
SALQACILLIVLAWLVIYARFVQTSRQRMRQRRFALQAHQDTLRGMMRQL
EDLVATDELTGLFNRRHFLRLATRELNAMEPEVVHGLALIDLDHFKRIND
IHGHAAGDQVLQAFAGVAGACLRDGDVLARYGGEEFVVLLPDCNAERLTA
CCERLRIAFTDVELVGLNVKNLSLSAGMTLLELGDDLDDALQRADQALYR
AKRDGRNRCAAAWENVDA
>Pfl_1030 Response regulator receiver domain protein (CheY)
MRSLKILILEPNPFQLMALHQMLNAIGIYDVLTAPTLSSAKRSLERRGAV
DIAICNPQLKGGDGLALITHLVARQKARSLILLGMVAPSLLADLEVLMED
DGVRLLGSLPTPVSAVLMRKLLDRYLSSPRHPVSA
>Pfl_1055 CheW protein
MIPSDTLNVTHEDARAIDDCWNRIGIHGDKSCPLLDEHIHCRNCSVYSAA
ATRLLDRYALQQDERDPVAIQVETELKTRSLLMFRLGEEWLGLATRSLVE
VAPLQAIHSLPHQRSRALLGVANVRGALVACLSLVELLDLDSSAAPATGA
RIMPRMLIIAAQGGPVVVPVDEVDGIHAIDERILDAASRSGAQASAKYTR
GVLPFKGRSLRWLDEEQLLSAVSRSLT
>Pfl_3289 conserved hypothetical protein
MRLICFTENVPEVIMRLNEYEHELQRDLQSVASDLRWSAVDLKRIAEQLR
QSGNEADAQAVLRSCEVLQSDEERLQLYAREVKARAISRTKVH
>Pfl_3972 Putative diguanylate phosphodiesterase (EAL domain)
MIDGQPLACFQPFIDTATGRIAGVEALGRLRQADGQLASVGPLFADPRTP
AIALRRMDRQIRDNALSRLHEAPPDWFLSLNMSPRWISRLRADQALPSLK
QLARHGIDPQRIVFEITELGGNSQRLSEVVARYRDAGARIAIDDFGAGYS
QLDRVLALQPDILKLDMRLFQAAALGGPSSDVVKALAQMAEKTGCWIIAE
GVETAAQLNFALECGSRYVQGFLFARAQEAFFGADDFVECFAELRQSYVR
QKLAERSKLMFMRQQLSELMTILQTWAQARAPLSALPQLDAFPWLLRFYQ
CDRHGTQLTPNLEWRQSGWVADNRYLGHNWSWRPYFYHLLAEGWEERRLT
LSNTYRDATSNQYCLTAGQFFDNGERLLLIDIDAAGL
>Pfl_4497 Periplasmic Sensor Signal Transduction Histidine Kinase
MEFKQSLAQRIIIAFALMSALVAGAFAMGIVATVHLVEEKLISAGLGGDL
QRLLLMDNVSDWSHRPEPDQLFYFSGGPGDFELPKDLRHLDSGFHEVFRE
QLSYHAMVEVVDGRRYVLLQDQSDFEERERVLFAVVLVGFVLSLALAVFL
GWVLARKVMAPVVRLARQVRHRDQLLGLAPPLAPDYAADEVGELAVAFDA
TLGRLRQALTRERLFTSDVSHELRTPLMVLASSCELLLENPGIDQRGKAQ
VQRIARASEEMRELVQTFLMLARAQREDAGAAPQHNLSQVAESLLCLWRE
PIEAKGLQLIFEPGNPPDTRYNATLLNAVMGNLLRNALHYTEQGFIRLTL
NENGFVVEDSGVGIPEEKREAMFQPFVRGNEKRGEGLGLGLSLVQRICEN
QGWSVTLSTMEPNGCRFKVDLGKR
>Pfl_4766 chemotaxis sensory transducer, Pas/Pac sensor
MFNKRLKQELAALREELSSLLQVKESLESEMLVLTLEPDGRIQSVNQNFL
SEMLYKSHDLIGRAIEDIVPAHVKSDEFHHRFKAALTRGEHFAGAVRLSR
GNGEEAWLRSIVQPIRSSDGRIKHFSIFSSDLTRTIEASREHENLIGALV
RSTAVIEFDLSGNVLSANDRFLQGMGYSLAQIKGKHHRQFCEPEEYNSAE
YQNFWRRLNNGEFVAGRFKRVDSHGRTVWLEASYNPVLDANEKLYKVVKF
ATVITDQVNQEQAVADAANIAYSTSLQTDSTAQRGTRVVTEAVNVMRDLS
KHMQTAGEGIEALNEQSQVIGTIVKTISGIAEQTNLLALNAAIEAARAGE
QGRGFAVVADEVRQLASRTSQATEEIVGVVRQNQDMARNAVALMTDGKQQ
AEQGLALAAEAGTVIVEIQDGAQKVVDAVGQFANQLSN
>Pfl_4260 Histidine Kinase
MNQDEQALDFSTVIASTVHDMKNSLAMLMQAHSQWLARLPEAQRQGPEQG
VIDFEFAHLNGMLVQLLGLYKLGVNQMPLQPAYHELDDFIEAQLAAHQDV
FASRGIIATYEVDPLSPLGFFDRELIASVLGNCINNAIRYARESLLITVS
DEAGQLVLSINDDGDGYPAEMLERQSDYVQGINHSSGSTGLGLYFAGRIA
ALHQRNGVGGRTEIRNGGPLGGGVFSIYLP
>Pfl_3347 UspA
MSEQPRYMLVASPLMENNPAFDRAAALAKAAGAALHIVAFDYLEGLATAS
MVNEQALEQMRIGYIERHRQWLEERAHSMRKLGVTVTTEVVWVERPLQEI
LIHLKEQPMAALIKALEPESFLSRLMFTPLDIHLLRECPVPLHFVSHVGH
ALPRKILAAVDPFHRDGQYAGFNDRILREAAKLASLCNAELDVLYAHDLS
SISANEFGFDNASAFFSSSAAKSLFDAQAAAFRELAERNGIADERQHMVM
GNPAKVLCSYASGYDIDMIVMGRVGHRGADRLVGSTVEQLLYKIPCSVWV
APENLPD
>Pfl_4252 MCP methyltransferase, CheR-type
MSTGNLDFEQFRVFLEKACGILLGENKQYLVSSRLNKLMEQQGIKSLGEL
VQRIQTQPRSGLREQVVDAMTTNETLWFRDTYPFEVLKNKVLPEAIKAAP
NQRLRIWSAACSSGQEPYSLSMSIDEFERTNIGQLKMGVQIVATDLSGSM
LTNCKTGEYDSLAIGRGLSADRLQRYFDPKGPGRWVIKAPIKNRVEFRSF
NLLDSYASLGKFDIVFCRNVLIYFSAEVKKDILLRIHSTLKPGGYLFLGA
SEALNGLPDHYQMVQCSPGIIYQAK
>Pfl_2085 Periplasmic Sensor Signal Transduction Histidine Kinase
MNVALRWPRTLASRLSLIFLIGLILAQALSFGAQYYERYESAKNTMLGNL
ETDVSTSIAILDRLPAEERPMWLKRLARKNYGYLLSEGEPGTPLDPQDVP
IAVTSITDAIGEAYPLTFTDIPGPIKHFQGHLRLSDGSPVTIDVRPSMVP
LSPWLPVVLLGQLALMLACTWLAVRIAIRPLTRLANAVETLDPNAHPINL
DEKGPNEVAYAARAFNSMQARIAAYLKERMQLLAAISHDLQTPITRMKLR
AEFMDDSAEKDKLWNDLGEMEHLVREGVAYARSIHGSTEESRRTNLDSFL
DSLVFDYQDMGKEVQLSGKSDAVIDTRPHALRRVLVNLTDNALKFAGAAE
LLIQRDKSGLSIKVMDRGPGIAEEELAQVMEPFYRVENSRNRSTGGTGLG
LAIAQQLALALGGSLTLSNREGGGLCAELKLPLS
>Pfl_2554 chemotaxis sensory transducer
MPAFRTIQARYTLFLVLFILLLSVLTVVGISQLVAPKLRHTEEQVVLNRI
AEVAEQIQGELNKVQAQQRSITQTIPLLDSAAIDSVLPGLVDQYGELKVF
GGGIWPLPGQREAGRNKFSTFWHRDASGKLAVNTFWNSDAAPNYYDQSWY
KGGMQTPRGQCAWAAAYKDDASAEPRTNCAMAIQKNGSAWGVSTIDVTLG
FFNDLVARKEKDLNAEMLIVEADGKIISNSSRINGPIVLKNISELAGGST
FASQIKAGLQNREQAQRVEFDNHGEASTFFMRPIEGTPWFLATALPTKML
TAQRDDVLSSLSLLQIPLVILLVLLQVYAIRQLVSRMKALKANIDSLSSG
DADLTRRITIRAEDELGAIGHSVNTFIAYLQNMIGEVTQATGAMASSLDN
LQRTSAHTSQILLRHASETDQTVTAINEMSSTAESVAQNAAETAAFTQRA
NENADRSRIVVGEASSSVVALIDEVASATHKVESMQQDAQRITEILGVIG
AIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSEINE
MLSRLTQGVSSSVSAMENTQASCQSAADATARVNSGLDEMAGSVSHINSL
STQIATAAEQQSAVTEEINRSMVQIRHMVDELVESGQASELNTRQLLEAN
SRVSAIMGRFKVR
>Pfl_5643 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MIWGSLASGSACVCSVHVSGRMLTLIRTRTLPMTLSFDLSGPSLEPRVIR
KLYATQMAVERTRLLYQGSLLPTLFMLINGLVCAGLLWSPQRYFVVSVWL
VWLLSLVALRVIQVAAFDSAIPDRQAQPIWGRMFLLGSTMTGLTLAGAGI
ALVPADNFMQQAWVFGLIGAATLSASVAYAVSIPAFLSFTLPCLLPAIGY
LFWGGDELARGWGWLGLILLGSLSVVAWQVNRLIDRGLLRRFQNQHLIEH
LQQAQTRSEQLNQELAKEIEHRRCAESKLREAQVELEDRVAQRSRELDVA
NQALSKSEARLALALKASELGLWDWNLQTDEVHHTQIQELFGIDPEYVTG
LLRHLRPRLHPEDVPPLKRALIEHLKGRTEDYQIEYRVRHGDGHWVWIED
RGRAVERDENGRVIRMVGTRRDISVSKSLEAQQQLAATVFEAASEGIVIL
DPNYSLIAINQAFSRVTGYDIGDMLGRNVVELPCSRDARRHYVAIRHALE
QHGSWQGELVETRKNGELYPQWLQLNAVRDSRGNVSHIVGFFADLSARRE
SEERMRYLTHYDELTGLANRSLFRERLHEAHQRVRQGGRRSLALLHINLD
RFKLLNDSLGHEIADQLLQKMSRRLVNALPEADTIARLSGDEFAVLFDAY
GNLSSLARVATRLSSKLRLPLTVEGHELVVSASMGISMLPDNAREISALV
SQSNMAMQHAKHLGGNNFQFYTDSLQASTLERLQLENQLRKAIEDKQLNV
FYQPKLCLATGRLNAAEALVRWDHPTMGRVPPGDFIGLAEETGLIGPIGE
FVLRQACWQACEWQRQGLAPIRVSVNLSVHQLRQGKLVSLVRQVLEETGL
APHYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYL
KRIPVDYVKIDQAFIRGLGEGSEDAAITRAIIAMAHGLSLKVVAEGVERS
EQLAFLKAEGCDEVQGYLISRPVEAVGLAALLREQEKPL
>Pfl_0480 O-antigen polymerase
MQFSGFSSTSSRIFDFISLWILPVGYFLLLCALFFLPGRSLHHKLFYGLF
SIPTLIALCLRPRELKEMLREPVFIALLLFAGWALLSLCWGPQDEPIGGM
FKPPLHTLMLFAGCFLLVRYRSDILTPLLFAAALVALIATIAFLIPFMLH
FEPGARLIGGGAFDNPLLSSHLFGFFCAYWLSLSMTCKNRRLYWLSIPAM
LIMFMAVIGTGSRTPLVALTMAALWLSLICWNRRSLVLLGTLAIGGATVV
VLFSKMIIERGDSYRFEIWQQALEKIAEHPWIGHGYNAVLAIDPGVGYNF
QEPHSFALGVLYYVGILGMLPWLFFQAWGLLSSWRQRVQPLLIIASTWLV
FGIGAGLTEGGGIISRPKEHWFLLWIPLALIAALSINQRARRLLAMPVQK
LSATALQQLSSDAQVIEEDGLGPKVLRLSDGSFLKLFRHRRWYTSGSFNP
YSERFAVNSEQLRRMGIPTPQVLNLYRLDDGSSAVHYTPLPGHTLRQVLQ
GITAPAVRHALVERFGKFMASLHEQGVYFRSLHLGNVLVLEDGEFGLIDL
ADLRIYPSPLSLSLRQRNLRHMQRYTVDRRWLFEDHLEALLQGYAVTASK
SAVDNLHRQVLAGNTPARVH
>Pfl_5607 PAS/PAC Sensor Signal Transduction Histidine Kinase
MNQNWHGTLIRHMLLLVTGCLVIGLITGYYGWSLAAGLGLYLAWTLKQLL
RLHEWLRLHQPDEAPPDGYGLWGEVFDSIYHLQRRDQRVRGRLQAVIDRV
QESTAALKDAVIMLDSDGNLEWWNRAAETLLGLKTPQDSGQPVTNLVRHP
RFKEYFEQESYAEPLEIPSPTNDRVRIQLYLTRYGNNEHLMLVRDVTRIH
QLEQMRKDFIANVSHELRTPLTVICGYLETLLDNVEEVNPRWSRALQQMQ
QQGGRMQTLLNDLLLLAKLEATDYPSDNQPVHIDTLLQSIKSDAQQLSGS
KNQKITLEADTSILLKGSEAELRSAFSNLVFNAVKYTPAEGNIRIRWWGD
DQGAHLSVQDSGIGIDSKHLPRLTERFYRVDSSRNSNTGGTGLGLAIVKH
VLLRHRARMEISSVPGHGSTFTCHFAPAQVAQARVISAAE
>Pfl_1567 Two component CheB methylesterase
MAVKVLVVDDSGFFRRRVSEILSADPSIQVVGTATNGKEAIDQALALKPD
VITMDYEMPMMDGITAVRHIMQRCPTPVLMFSSLTHEGARVTLDALDAGA
VDFLPKNFEDISRNPEKVKQLLCEKVHSISRSNRRFSAYSAPAPAAAPTP
APIPAAAPSSFGSHSAPARPAPAPAPTRAPAASASSPAPKRKNYKLVAIG
TSTGGPVALQRVLTQLPASFPAPIVLIQHMPAAFTKAFAERLDKLCRISV
KEAEDGDILRPGLALLAPGGKQMMIDGRGAVKILPGDERLNYKPCVDITF
GSAAKSYSDKVLAVVLTGMGADGREGARLLKQGGSTVWAQDEASCVIYGM
PMAIVKADLADAVYSLDDIGKHIVEACV
>Pfl_0789 chemotaxis sensory transducer
MKSLLYPAVSLMNRLSFGMKFSLISVLFLVPMLVTNFYLVRDSYREFQGT
RVELQSLDLLGSSLTLRRDLETLNNLVQINVTLGQSGKAGNVEAQIASLE
QNVLARLQGLTPMTEDPEQIKFFEAKRDEMIAAFKNQQAENSLQSKSALI
GKLLGNAQVFSQIVASQAGLSRDNQSDIRQLTELITANTPAVTQALGEGR
AMGSYSLGQGFLNSSSSTRFDELLVQIEKLQAEYGLKLQDALGSSKAARD
SLSALADASKASLKQAGTLIEEQVVMAETLDAPWQGFYDQVTGLMDQTYQ
LDDATLKFLDTQLQQRLGQNRTHMVLQAVALSVVFVLIFYLYGGFYASTR
ATLKNLGAMMDKVAAGDMTVNFRANSRDELGELGEVFNGTVRKIHDLIER
VGHTVGEVERQAGQVENVSAQSNQAVAGQRTQIEQVATAMNQMSATSLEV
ARSAAAAVSSAHSVNDETISGRGLVESQQGSIAALASEIDQSVLVINQLA
SDSQSISRVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRT
LAKRTQQSTEEIEQMIAKLHGGVGAAVKAMGVSHQMANGTVGQSEKVQQA
LENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGERTAEGA
HQTEDASRALSAQVVELKQLISAFRV
>Pfl_3379 Two component Heavy metal response Transcriptional regulator, Winged helix family
MNILVVEDEPKAGNYLLNGLQELGYSVSLARDGADGLHLALEFDFDVIVL
DVMMPKMDGWEVLRRLRKETDTPVLFLTARDDIADRVKGLELGADDYLIK
PFSFAELVARLRTLTRRGPIHEEEQLQVADLQIDVLKRRVTRAGNRITLT
NKEFALLQLFAAHTGQVLSRSLIASRVWDMNFDSDTNVVDVAVRRLRAKI
DDPFPLKLIHSVRGIGYRFDTQP
>Pfl_0924 Putative FecR
MDFSAQVAEQAVHWLLEMQQGPLNPRQQQAWQQWIDAHSEHRRAWEHIQR
VNSRLRGLSSPLAHAALNAPKSGSRRQALKFLLILGAGSAVTWGMREHNP
LPSLLADYRSPIGQRRKISLGAGGQLQLNTASAADVRGDGLIRLLEGEML
LTATQSFEVQTAQGLLKTQGARINVRQFADRTQIALFEGRVELNAQGRAP
MLLPVARQLSFSTTGVSPAKPLDANSGAWADGMLVAAHMRLGDFLDELGR
YRRGQLHCDAKVADLLISGTYPLDDSERILDLLEISLPVKVKRFTRYWVT
VEAKV
>Pfl_1058 Putative diguanylate cyclase (GGDEF domain)
MNDLQIDDIKTDENAAMVLLVDDQAMIGEAVRRGLSNEENIDFHFCSDPH
LAVAHAVRIKPTVILQDLVMPGLDGLSLVREYRNHPATKDIPIIVLSTKE
DPLIKSAAFSAGANDYLVKLPDNIELVARIRYHSRSYMTLLQRDAAYRAL
RVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRSLRDQSQL
SLLMIDVDYFKSYNDTFGHVEGDEALRKVATAIREASARPSDLPARYGGE
EFALVLPNTSPGGARLVAEKLRQTVAALKIPHNAPAEGSSLTISIGLATM
VPESGSDCRLLISAADRGLYLAKNNGRNQVGIE
>Pfl_0261 Periplasmic Sensor Signal Transduction Histidine Kinase
MKTPVWFPQSFFSRTLWLVLIVVLFSKALTLVYLLMNEDVLVDRQYSHGV
ALTLRAYWAADEENRAKIADAATLIRVVGAGVPEGEQHWPYSEIYQRQMQ
AELGADTEVRLRMHSPPALWVRAPSLGDGWLKVPLYPHPLRGQKIWNVLG
WFLAIGLLSTASAWIFVSQLNQPLKRLVYAARQLGQGRSVRLPISDTPSE
MAEVYRAFNQMAEDVEQAGRERELMLAGVSHDLRTPLTRLRLSLELMGDR
TDLTDDMVRDIEDMDAILDQFLAFIRDGRDESVEEVDLSDLVREVAAPYN
QTEEKVRLRLEPIQPFPLRRVSMKRLLNNLIGNALNHAGGSVDVAAYVSG
DTSAPYVVLSVMDRGAGIDPSELEAIFNPFTRGDRARGGKGTGLGLAIVK
RIASMHGGNVELRNRSGGGLEARVRLPLGLMLPRDAV
>Pfl_1572 CheW protein
MNDKATAAKGSEDPILQWVTFKLDNETYGINVMRVQEVLRYTEIAPVPGA
PSYVLGIINLRGNVVTVIDTRQRFGLMSGEISDNTRIVIIEADKQVVGIM
VDSVAEVVYLRQSEIETAPNVGNEESAKFIQGVCNKNNELLILVELDKMM
SEEEWSELENI
>Pfl_2170 Putative diguanylate cyclase (GGDEF domain)
MALDPLTMLTISTALAAAAALYLAVEWRSIRESSLLFWSAGFATITVGSS
LALLRANGYPLIGIWFANGLLVVAHWLFLLGVARFTQQRLSRAWYLMFLL
WLALLLLPEDPSWSKIMLMANSLLVAALMLRASLLLRPHGKSLSVGAVQL
RYVLLIHGAFYFTKAIIAVIPGTLIDLASLRGEIIQISLVEGAMAIMLIA
LSMTGTERYRREKQIAELAARDPLTALYNRRALEVRAPRLLDEVSSARPG
ALLLIDIDNFKLVNDLYGHTAGDRLLIALSEMIRAVLPNGALAARLGGDE
FVMLLGDASHAQIMDLGSALREQFQQMTSQTYTTPQAVTLSIGAKVFDQP
PASLAALIEQGDSALYESKRGGRNRIQLADYT
>Pfl_4239 Periplasmic Sensor Signal Transduction Histidine Kinase
MHLIRSLRVRLMLAATTLAVLFMLALLPAMQGAFSLALQDSIEQRLASDV
TTLISAARVENNRLMMPAQLPDERFNLTDNRLLGYIYDREGHLVWRSKGT
QEEKINYTPRYDGLGNEFARIREANGQEFFVYDVEVKLLGGKSAAFSIVA
LQPVREYETTLEGLRENLYLGFGAALLVLLALLWIGLTWGLKALRRLSQE
LDEIEGGTLESLSEQHPRELLRLTGSLNRLLHSERQQRSRYRDSLDDLAH
SLKTPLAVLQGVSEDMAQRPEDRDQAWVLQTQIERMSQQIGYQLQRASLR
KSGLVRHQVRLRPVLQSLCDTLDKVYRDKHVRVAFDLPEHCYVPIEQGAL
LEMMGNLLENAYRLCLGEVRISVRESLDGIELCIEDDGPGVPPDQRARIL
ERGERLDRQHPGQGIGLAVVKDIIESYSAKLTLGDSPMGGAAFRIHFPAV
>Pfl_5282 extracellular solute-binding protein, family 3
MPLITQLFAVLVFACLSFAARGEKLRIVTEPWAPYVYEQDGKNLGLDYET
TAIVFKRLGIEVEWQFLPWKRCLSMLETGQADGALDIFHSDERDATLLYP
SEPLSDVEFVLFYANERPHPFRSLQDLKGLTVGTSPGYLYSPDFRESTLF
TREPAPTHEANFGKLVRGRIDLLITDRRVGQHLLDELGIRDKITENPTVI
SRQSQFLAVRRNAGMDLLVQRFGAELKRFKREPAYAELSARYGAAPALTA
PLGNATASGKTVEQQESGAQ
>Pfl_3935 Two component Transcriptional regulator, Winged helix family
MHVLVCEDDELIASGIVAGLTAQGLTVEHVNTASKARAILKVAEFDVMVL
DLGLPDEDGLKLLQQLRQQGLEIPVLILTARDSVTDRVDGLQSGADDYLL
KPFDLRELFARLQTLLRRVAGRSVNLIEHGALTYDPSSRETTLAGRPVDL
SRREQSLLQALLHNRGRVLSTEQLKDSVYGFNDELESNALNVHIHHLRSK
LGKGIVETVRGLGYRLGPADGGEPDK
>Pfl_3391 Two component Transcriptional regulator, Winged helix family
MDNLGFGRVLLVEDDERLAALIAHFLEQHGYEVRTVHRGDLAVAAFLEFK
PKVVVLDLMLPGQSGLHVCREIRSVSDTPIVILTAKEDDLDHILGLESGA
DDYVIKPIKPPVLLARLRALQRRQVPDSGVVSSLEFGNLIIDRSCREVRL
AGELIELTTMEFELLWLLASAAGKILSRDDILNRMRGIAFDGLNRSVDVY
ISKLRNKLKDNPREPVCIKTVWGKGYLFNPFAWEL
>Pfl_2196 Metallophosphoesterase
MLDPARSYDLIGDVHGCALTLEHLLDRLGYHKQGGVWRHPSRMAVFVGDI
IDRGPRIREALHIVHDMVEAGQALCIMGNHEFNALGWSTPAPPGSGKQFV
REHTPRHARLLHETLTQFENHPRDWHDFQQWFYQLPLFVDAGRFRVVHAC
WDAGLIEPLRGLFPDGCIDEHFLQASAVPGSFACTVFDRLLRGTDMRLPD
GLTMTSGDGLVRSFFRTKFWEDDPQTYGDIVFQPDALPEPVAQKPLTSSE
KNSLLRYGVDEPLLFVGHYWRSGKPAPIRPNLACLDYSAVLYGKLVAYRL
DQETRLDPHKFVWVDVERPEVLR
>Pfl_3956 Histidine kinase, dimerization and phosphoacceptor region
MTVFQTETASPSDRSARSEHPLAPSAMYASLKSITTWPPSRENARRFTLL
LCTGSALGSLLTYGLSAQLPLGLLLINVAAAGCVWTQHRLSRKSIKFQPQ
ELADRLLEVQENERHRLSRELHDDIGQLLTAAKLQSEWLKRRLPADMQEH
CSVLCETLEETLNKVRDVSAILNPRQLTSLGLEASLRAHLLKVLTNTSVH
WSLDCQQRLNGIPEEMAVAAFRITQEAVTNILRHAQAKNLLIRVQRLPQG
LTLLISDDGLGFSPAANPGREGQRGMAGMAERIEQLGGTLSVTSEPGKGT
QIEALFPWAPRALERASTNKVMR
>Pfl_4796 Cyclic nucleotide-binding (cNMP-BD) protein
MYLLGEQSAQADALINHLQSLPAQWLEGLVPCGPALELEATDDLLARLPD
DQLFLLTQGVITGRLDGRGLFYWHEGDLIGLQQGPEWADCTLYSDNPLTL
LPYRRSDLFQHVYGETSRSEQFLRYLLGQMALLAHAVAEFKPREFRSTNG
FKRVDAGDILIREGDDADHVFVIIEGHAEAFVNGHKVGDVPKDEIFGAMA
VFTGEPRNATVIAREASTVMLIPGDQFLSMTRTNPKIAHSLIESMALRID
QLNKQLTGFNSQT
>Pfl_2855 extracellular solute-binding protein, family 3
MKNFVIPAVLTSLMSCGVAVAAELPASIKEKGEIVVAIMPNYPPMDFKDP
ATNKLTGLDYDLGNALAERLGVKIKWQETGFEQMINALTTERVDMVLSGM
TDTAERQASVTFVDYFTSGPQFYTLQKNATTNEIIDLCGKKVGTSRRTTF
PAEIAAWSKENCEAAGKPAINVIGTEGSADARAQLRQSRIDAAMQGSETL
SYLKTQEKDMYKTVGQPISVQFTGLGVSKKKPELSEAVKVALQSMVDDGS
YNAILKKWDLELGAIKDVTINAGK
>Pfl_3354 Two component Transcriptional regulator, Winged helix family
MRLLLIEDDVALGEGIHQALGREGYTVDWLKDGSSALHALLSENFDLAVL
DLGLPRMDGLEVLRRLRGSGSNLPVLILTARDATEDRIAGLDAGADDYLI
KPFDLAELKARLRALLRRSAGRAQMLIEHAGISLNPGTQQVSYLGQPVVL
TPKEYQLLHELLSPPGRVMTRDHLTQLLYGWNEEAESNTLEVHIHHLRKK
FSTDLIRTIRGVGYLVEERR
>Pfl_5251 extracellular solute-binding protein, family 3
MPRLHRAFALIGLLLLGQSAAAEKLRLVFDVWPPFTDDTLVNGGLATDIV
STALARAGYASGYEQVPWARALMGVGEGRYDVLVNAWYNDERTKLGQFSA
EYLLNRVRFLKRKDAPIEYNNLQELHTYPIAVVRGYAYSAPFDADSALQK
VPVHNFAMAVRMLAADRVKLTLEDEYVARYYLARESPKVRNAVEFLPKPL
SENSLHILVSLKNPQHEQIVAGFDKAIASMKADGSYDKLLRQHGM
>Pfl_4876 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MSNVTPPASVSSTQPAPGSSLRGTLKGALATLVLLLLALLFWQLLDQLRE
TQKNQRQYTIDYTADLAAQVSLNMALNAQIALNLLPIVEQPQSADEQQAL
LRKLQKSLPDLRSLALLSPSGKILSDSATDSQDADYLSDLVRRSRAQAHY
FSNDDDGSVVHLLLHQASGSTRGYWALRLTPTFFKALTKQGETGIRPLWL
VENRINHQIISRDEAMPIGSTSVLTPDDLANSVLTVPLSSSDWQLRGLFD
RQHVLEQLLPAFIGKCLLGLALSLLPFIALLNMRRRQRQVHEGRRRYQDI
FEGTGVALCVLDLSGLNQLFEKAQIQTSDQLKAWLDQPAQRLQLLQELRV
TEVNQVALQLLNVNSCDHAWQLLIDGQPHSQCAIGNQVLDAVLQQQKQLE
LEIKLPDINGRDQHLWLVLRLPQEQHDYKAVILSINDITSRKLIELSLLE
REGFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQTLGYNRTELHQMGEY
FWEILLHPEDADYYHRSRQMQRHAGYSQLLQCQLRFRHRDGKWRRFDIRE
QALARDKHDQVTRIIGVAKDITEQIEASESLRDSEQRYRMLAESISDVIF
STDSQLSLNYVSPSVQAVLGYDAEWIFQNGWQSTIANPQQLSGIYHLMDR
VSKALGKPEQLVTLRSQVQTQMFLFDCLRADGRKIPIELRLVLVWDEHGA
FEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEA
FSRVSGYAVSEVLDQLPNMLTVDEQQDAHLRYVLKQLHQHSTWEGEVWLK
RRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYD
ALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHAA
GDRMLKDMATRLLACVDDDDTVARMGGDEFTLLLQHRSSREMALNRAIHV
AEQILGSLVRPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYH
AKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGD
GKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVISEACRQ
LKTWHQSRVRVPKVSVNISARQFSDGQLGTRIATILKETGLPPACLELEL
TESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLK
IDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREH
GCDEVQGYLFGRPMPAGRFEAQFSNDALFMFD
>Pfl_3340 universal stress protein family
MGQYQRLLLVADQTLHQTPAMLRAVALAKASGAALDVRVFAEPAPVVHLW
EDKIDEVGYQRYLRHHRRWVADQLEQLSEQGLKVTVNVVFTTHALLDILR
AVADLKPDLLIKDVTLEPLLKRVFITPLDCHLLRECPVPVHLVNEVRYSL
PHRIVAAVDPFDPETQISGLNDTIIQTANALAAQCDAPMHLLYAYDLSPA
FNGDAPLIGAGWGVDFVEELRQSLHQAFINLADRYGIPPERRHFVMGLPV
PVISEFVEQYLADVVVMGTVHRAGIDRLMGSNTERALYSVPGSILAVGPV
VRTEVQSPGSDERSL
>Pfl_5581 FHA domain containing protein
MELVFEMLNTKQFVPTELCQRTFKQAGGVIGRGEDCDWIIPDRKRHLSNH
HAIVSYREGTFFLTDTSSNGVQDGDSGARLHKGEPVRIEHGSTYVLGDFE
IRARLVRDPATFDGEVGLPRAAGSIIPDDAFLDLDPLKSLEQQERVYSEF
EEMLAPVTDPEDSRQRADYARIDMESLMVPELIVEPKPEPAPAPKAVERQ
SETFWDKFGAALGVNVKNLSHDEREALALNAARLLRQSIGGLQQSLRTRS
ELKNELRLAQTTVQGTNKNPLKFAVDPSEALDILLQPNKPGHLPAEQAIS
RAFRDLQAHQVALLTASRAAVRGTLEHFSPEQLTLRFERDNKPLLATAGG
RWRAFNRYHHALRQDDDWSERLLARDFAQAYEEQIRLISTLHTDHQG
>Pfl_2860 HPP
MLARWLPAAINTRPTEWSRAAIGMALGTLFSVWACSQVFGIEVAYHLIGP
LGASAVLLFAVSSGALAQPWSIIGGYLCAGVVALLVAHVLGRTLGSACLA
AGMALILMCWLRCLHPPAGAVALTMVLADPMTIAMDWKALEPVMLSAACL
LLAALAYNNLTHIRYPKRPAEPAPAVAPVDIQAITAEDLKLALADMEAFI
DVTPEDLEQLIHASERHARRRSIGEVLAGRR
>Pfl_2162 Multi-sensor Signal Transduction Histidine Kinase
MNPQDKEAFEELLANCADEPIRFPGAIQPHGLLLTLSEPDLSIIQISANV
ETLLARPAQELIGQPLQSLIGDAHAAQVREALQQAALSDAPPLHFRLNGT
AFEGLLHRHQDVLILELEIHVENFQPRNVAGTETHLGRMLARLQKAQSLQ
ALYDISVKEIQAMTGYDRVLIYRFEEEGHGQVIAEASDPSMEVFNGLFFP
ASDIPEQARELYRTNWLRIIPNADYQPVPLVPKLRPDTQTPLDLSFATLR
SVSPIHCQYMKNMGVLSSMSISLLKGDKLWGLISCGNRQPLHVPHELRTA
CQTIGQVLSLQISAMEALEVSRQREEKLEALALLNQAMIDSPQNVFDGLA
NQPQVLMALANAGGIAIIEDKQLHRYGNCPEPEEIRALHKWLQERGEPVF
ASHHLASVYPPAAHYQQVASGVLAMSLPKPVDNGVLWFRPEVKENINWSG
DPRKPLDLENSDAGLRLRPRTSFEIWKVEMAGISTKWSHGDLFAANDLRR
SALENDLARQVRREQEAVRARDELVAVVSHDLRNPMTVISMLCGMMQKAF
SSDGPHTSRRISTAIDTMQQAAGRMNTLLEDLLDTSKIDAGRYTIAPQKL
DVAQMFEEAQSLLAPLALDKDISISFEADPDLSIHADPERLFQVLSNLVG
NAIKFTPRLGTVDVYAKSVGDDIVFTVRDSGEGIPKDHLPHVFDRYWTVK
EGNPTGTGLGLYITQGIVEAHGGQIVAESEPGQGSEFRFTVPRLD
>Pfl_4480 conserved hypothetical protein
MGFVHKLAWLGAVLLLSFGQANAAITEKDDSKAAIALLEKALAYYHDNGD
KAFAAFSRQGEFVDKDRYVFVVDTKGVMLASGGPSSALIGRDVSEVLGPD
LQKSFKDALKVPEGNGIQQAEYRWQNWSDGKVERKHVYYQRIGQRILAVG
YYLPRASAEQAKALLDKAATDLAKDEKGTLSAINSLKGGYLQDDLYVFVV
NLDNKRYVAHGTNLRLINTDFAKVDDPEGKPVGEPILALIGKQDEGEYEY
RWKNPVTGKVEDKHAYLKKVGNMLVAVGYYSA
>Pfl_5127 PAS/PAC Sensor Signal Transduction Histidine Kinase
MMRFCCLWVIGCLAFPLMGWAAPAPPSHLARLSASEQQWLAQHNELRVGL
VLQAPYAQYDRRLQRLSGANVEVMKALARALNVELSWRNFQDLAQLEAAA
RDGEIDIAPGLTQTPGGLRLWQFSDPYMRVPQLVVSDQKSSATVELEKLD
SQTRVAVRMPGVTADYLRGNYPHLNLQGVPMERQALQLLLSQQASYAVVD
EAQLGRLSAEPEFAGLVVVGDIGLPQLLRIGTRRDWPELAGIVESALRAI
PAKDLERLHAQWLQPKYPRLSESPGFWQNLSLLFAVLLLSCVAIVFWQRR
QQRSLEQRLFDAREDIALRAASEEALRLTQFSIDQSTVGILWVNWDSHVR
YANRAAENMLGYPQGAIIDRPLIDFEPGLHMDRWLNLWKRARASEEGPLS
FETNCVRADGSVLPADVSLSFLRFRDGEYLVVYLTDVTERRRALAALQES
EARLQGIAANVPGLVFRLERAPVTGQIDFAYISEGSESLVGYAPAAIAHR
DMGLRSLVHPDDRAAYHQTQDQALDTDSDWSWQGRILTRQGEQRWAEIKA
ITRQLEGGSYVWDGIVWDITESKRIELELAASREQLRELSAHLESVREEE
KARIAREVHDELGQMLTVLKLETSMCELAYAQLDPGLNERLNSMKRLIAQ
LFQLVRDVATALRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLAP
LSDAKAIGLFRILQEALTNVMRHAQAHTVELTLTQEGDELCLTVSDDGVG
FVAAAGRPTSFGLVGMRERVLIMGGQLSLDSEPGEGTTLSVRVPLDEEK
>Pfl_0190 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain
MVNNNQKDSSPPQWPEAAQTLMALMHAQGEVARLSEREQLFSSLLVSVNA
VLWAFNWETRQVLYVSPAYERIFGRSAGLLLADYNQWRDSIYPDDLEYAE
RSLAEVLHKGAVEDREYRIIAADGQVRWISDKCFINRQDEPGQPVIIVGI
AEDITDKKQMETELQRLATTDVLTQSSNRRHFFECAHREFEQARLQGAQM
AFLLLDIDDFKVINDTYGHPEGDNVLQRIAECGRASLRRGDLFGRIGGEE
FAAVFPGCAPDMAMQVAERLQREIQRLSFNHADQTFGITVSQGLTSLTPE
DESLDTLFARADAAMYEAKRQGKNRIISA
>Pfl_2237 Transcriptional Regulator, AraC family
MTSQCRVPTYVMQQRSEMMDFYIRDKKGRRAETSPHRHEYFQIQINLGGD
TVQHIGNAVRPFPRNALAFILPHRVHVIPHPADSNFMVINFSQTFLLPHL
QCDPMDLEEVSILLAPELSPFRFQEHLDFILGDEDFNEVCGLIEQMRGLD
ENRQFGTREVLKGLLLQLVGKVCVLYAEPLKRLAEENAAQASRRDALSRM
FEYLRKNIADPDLNLIKVAAATYLSPTYLTHWLRKEIGKTFTELVLERRM
HAARNYLLNGTRPVGEVARLCGFADEAYFSRRFRQIHGQPPGQFRRRQLD
PDTPQSPVDA
>Pfl_4197 Two component Transcriptional regulator, Winged helix family
MNDEQKDDKRWSIRALIVDDDVPIRELMIDYLARFNIHASGVTDGAAMRQ
AMQAEHFDVVVLDLMLPGEDGLSLCRWLRAESDIPILMLTARCEPTDRII
GLELGADDYMAKPFEPRELVARIQTILRRVRDDRSEQRANIRFDNWRLNS
VLRQLIADDGLVVPLSNAEFRLLWVFIERPRRVLSREQLLDAARGRSIEA
FDRSIDLLVSRLRQKLGDDPKAPQLIKTVRGEGYLFDARDIG
>Pfl_2398 Protein tyrosine phosphatase
MRVLFMCTANSCRSILSEAMFNHLAPAGFEAVSAGSFPKGQVLPRSLTTL
QAAGISIAGLSSKGNEAFEDNPPDIVITVCDKAAGEACPVYFGPALKAHW
GLEDPSDVVGDERTIDAAFRATLAQIETRCRAFLALPFAELDRDALKREL
DRISTL
>Pfl_2310 Transcriptional Regulator, AraC family
MQNAFAILCQGDERHRPHTLDALLAGVAPLLPMLDVIPNAAIFIKDVQAR
YVLANRTLVQRCGLKDLKPLLGKTSAQVFPAQLGPGYTEQDRRVLEEGLV
LEDQLELHLYGSREPGWCLTHKRPLYNRDGEIIGLAGISVDLQSAAETHP
AFQRLAAVDEHIRAHFNRRVTLSELTRIAGISVAQLERYCKRVFHLTPRQ
MIQKVRLDHAHRLLLTELPITEVALQCGYTDHSAFTRQFKASTGFTPRQY
RQATER
>Pfl_2702 Periplasmic Sensor Signal Transduction Histidine Kinase
MIGRMLRRDTLSRRIALTIVAAMLASLLLNALFVQVAGIWARPPIERTGL
LEQIAATTRVIEAAPATLRPQLASAASSPMLEVLWKPRRVDFGLPGEGEQ
VEAGKVPALRQLLGDDRQIDVFNPDDWPAGSPRAHYMALVRLADDSWLSF
TPPERSWGLSLNVRIAVIVALGLVATLLVAWLATRQLAQPLQRFAHAARR
FGGDLKAPPIHLEGPHEIRQAIVAFNTMQAQIQHFIGERTHMLAAISHDL
RAPLTRMRLRSEFMEDLDHQGKLIRDIEEMQSMINAALAFFREDTHLEQS
TAFDLSELLQTIVDDYRDQHIDIDFSGPAHVVYDGRPLGIKRVIVNLLDN
AVKYAQRPSVALSSDDTSIRIEVIDEGPGIPEDALERVFDPFFRLETSRN
RDTGGVGLGLSAARGIIREQGGELSLRNRRSGGLRARVELPHR
>Pfl_4240 Two component Transcriptional regulator, Winged helix family
MKLLVVEDEALLRHHLQTRLTESGHVVESVANAEEALYQTGQFNFDLAVI
DLGLPGMSGLDLIRQLRSGGKTFPILILTARGNWQDKVEGLAAGADDYLV
KPFQFEELEARLNALLRRSSGFTQSTIVAGPLLLDLNRKQATLDEQPLAL
TAYEYRILEYLMRHHQQVVPKDRLMEQLYPDDDERDPNVIEVLVGRLRRK
LEGPAGFKPIDTVRGLGYLFNERCT
>Pfl_4192 chemotaxis sensory transducer
MISAVQGRFANLGMAKKLGIGFVLVLLLTALVAAIGVWSLQTISQRFDGL
KQMSSLNSGLLKVRLLEQDYALHGNPKTVDALHEGVDGLIAMANGLKAQS
SANVPVMSDVEQSLVAYRKAFDEFVSLSQAKDLALEMASWSVSSVANNLD
VLQAGLADDGAYTLKDSEGKDGAQFIEQAGQVSQVSRLMLQAMNEARVRL
DQSRKGDDSAGQGNIEQAAQAQAQAEQLKSTVKDEGYLTVLNEVSGHIAG
FSDKLAEYTGLLAQEKTVYQQLHQRADEVVARVDQAYVAQDGAMQGELKK
NSVLIIGSSALALLVGLIAAWVITRLIVAPLRSVIHVAQQIAAGDLSATI
EVTRRDEIGQLMLAMQQMGAGLSTIVSGLQAGIEQLASSAQSLSAVTEQT
NLEVSSQKEETEQVATAMNQMTATVHDVARNAEEAALAAQTADGKVESGQ
QVVRQSMARIEQLADSATSASSSIESLSAEIQNIGTVLGVIKSVAEQTNL
LALNAAIEAARAGEQGRGFAVVADEVRALARRTQQSTEEIERLVSALRSA
AHSSVQQIQSSGELVKLAVSDALQTESALGSIAAAVSLIQQMNQQIAAAA
EEQSSVAEEINRSVTSIRASADQSSIAMRGNAASSVELAQLGSELRGMVG
HFRL
>Pfl_1833 chemotaxis sensory transducer, Pas/Pac sensor
MRNNQPITQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFSREELIR
APHNLVRHPDVPAAVFSHMWGTLKQGLPWMGIVKNRCKTGDHYWVNAYVT
PVFEGNQVVGYESVRVKPTAEQIRRAEALYQRINQGKSAIPSSDKWLPIV
QDWLPFILVSQLSFMIGATLNSQWGFALAAGLSVPLGLLGLQWQQRGLKR
LLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILSQEARLKTCLTRLQDTA
EHLTDQAKQSDALAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHVQ
RTADATQEANRLTGRGRDIAGETREAIQRLSVVVGETGLTVTQLAKDSDE
IGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT
SESTGQIHALIAKLQQTASSAVQTMEAGHRQAEEGVARVLEADQALVGIS
EAVANITDMTTQIAAATEEQSAVAEEISRNISNISELADQTSEQAHNSAL
LSEELTKTANTQYSLVERFNR
>Pfl_1029 Possible Sensor with PAS/PAC domain
MTKDVAMRFFSGLKPALCWWFLLGGFGLAQWAEAAHLAKHSEALESVQLI
ELDEHERQWIRENPRVVVASVQYPLYLFQDEHGQWSGLNNDVLKHISTMT
GLQFVHQESFSTDHMLERLQSGVADISTTLAMNDERKVFLDFSHAFGGAG
WVFVGHSDEPAIQSLATLTKRVLVLPARHALEDSIRRDYPSIQIRSVKTY
AEARALVESGEAYATIENEIGAQLFPSGLLKVGGLVEGKWEADHLAVRKG
MPELLSILNKALGAFSGAELRAMRLKWLGGVSPVPAPSIGARMIEWGCWA
MGAVGLFGLLSLLWNRRLAAQVKQRREAEKDLGDQLAFQHALIDAMPDPV
FVRDLQGRLIMCNRSYEDALSVRQEQVLGRMLFEFDALPQATALMLHDEF
IAQLGTRKTRFSKRQLMFKSGPRQIYQWTVPFYSADGKLRGLLGGWTDIT
ERRKESGCRCLH
>Pfl_3152 SOS-response transcriptional repressor, LexA
MYSMTTLTPRRTAILTFIRERIAEHGQPPSLAEISEAFGFASRSVARKHV
LALTEAGFIEVNPHQARGIRLLGQPARPELLEVPVLGRVAAGAPIGADAD
LHNRLMLDPALFSRTPDYMLRVQGDSMIEDGILDGDLVGVRRNPEALNGQ
IVVARLDGEVTIKRFERVGDAVRLLPRNPAYQPIVVRADQDLAIEGVFCG
LVRQG
>Pfl_3975 Multi-sensor Hybrid Histidine Kinase
MSSRLMSFLIAWSACLGFCTSSTAASPASQDFTLLGRSADRSVQALFDPS
QVAWAHTRNELILGTSAPDYPPFDMTASGHDYEGFTADYAVLVGQAIGLP
IRVKRFASREAAIRALIDGHIDMLGTANGFEAENADIVLSRPYAIDQPVL
VTREGETRTLTEGLAGMRLSMLYHYLPLDDVKAMYPKALITSYPSYQNAI
NAVAFDQADVFLGDTISTHYMISKGYLNNIRMANFGKHEAHGFSFAVHRN
NPQLLAIIDTVLKAVPGSERENIAKRWSVGSDTLLTDQKLQLTKREEQWL
KKHSVVSVVVNEAFAPLTFFDSDGNFRGISADLLELIRLRTGLRFEIRRS
RSDAEMIKQVEHHQADLIAALLPTAQREETLNFSRPYLENSYVLLTRKAA
DSPTHLGQLKRKRLAIAQGNPMIEYLRSEFPRIQLIETPDTFSAVALLDE
GQVEGAVNSLVIANYFIASRTFEHPLQITTTIGTRQAAFSLATARDNTEL
SSIIDKSLMSITPEELGIINGRWRGYSSVSQGTWRQYQRFFYQVIGGACL
LLLLSLLWNAYMRRQIKQRKAAERALNDQLEFMGSLVNGTPHPIYVRDRQ
GLLQSCNDSYLQAFNARREDVIGKSVMQGALNNAFEAQTYQADYQRVMAE
GRPLVLDRPLQIGNRQLTIYHWILPYRDSSGEVQGIIGGWIDISERRELL
DELRAAKERADDANRAKSTFLATMSHEIRTPMNAVIGMLELTLKRMDQTH
PDRSGIETAYHSAKDLLGLIGDILDIARIESGRLSLTPERINLIDTVGSV
VRIFEGLARQKQLSLAVSVSPPELNVDVHLDPLRFKQVLSNLISNAIKFT
EAGHIRITLDVLPTDDPERSMVQLTVQDSGIGITTQDQSRLFEPFAQAAN
GGQRTFSGAGLGLVISRNLCEMMGGKLRLSSLPGIGTQVSVSLPVVILPA
QVARAEDEPEIQASLIPLTVLVVDDHPANRLLMCQQLEYLGHRFCIAEDG
QQGLEQWKNGEFDLVIADCNMPVMNGYDLTRAIRKHETLTRRPACTVLGF
TANAQPEEILRCKQAGMNDCLFKTLSLNSLSEWVNSVQPLFRAPVFNLQG
LTLLTGGNPSQTHRLLAELLNSSRLDRQELQALSLTRDPPALAIIAHKIK
GAARIVQASRLIDSCEALEQACQQALPGDEIERRCQASRLAILELEQALE
QQLNRISQSKVTRA
>Pfl_3856 Heavy Metal Sensor Signal Transduction Histidine Kinases (STHK)
MRRLSLSGRLVLLFAGCTAVVSLVAGVVFNRASEGHFIELDQQLLEGKLL
SVRQTLRSGSDAAHITDELSQQGDVSLRISSSEGQRWFGRSLHTPANLPQ
QPGLATINDNGTDYRLLNAALEPGKPDSPQLTLLLDITHHQHFLQRMQHL
IWLTVGLSALATALLGAWAARSGLRPLRRMSAVARGISAQSLNARLPDAR
MPAELAELAHSFNAMLGRLDDSFQRLSAFSADIAHELRTPLSNLLTQTQV
TLTRPRPLEDYREALHSNLEELQWMAQLVNDMLYLAKADHGLLVPKREPL
ELAEEADALLEFFAPLAEDAQVSLSRDGAGRFEGDRAMLRRALSNLLDNA
LRFTPAAGEVRVKVVEQAKFLSVTVENSGEGISVELLPRLFDRFYRADPA
RQEGSSEHAGLGLAITQSIIRAHGGQIHCESAQGWTRFVIELPKND
>Pfl_3253 Periplasmic Sensor Hybrid Histidine Kinase
MKFEKNTELDQANLRIIIASIALVYMAVLGFLPGQRFDTYLPVVTYISLF
LLASVVLRQVIVRWPGHYPARRIFGMLHDYTGTSFGLVVGGEAALPIYAV
MVWVNLGNGMRYGSRYLAIATVLALLALLAVYRLTPYWQAQPFMVLMLMI
TSTVIPVYAHLLLERTRKASEEAVAANLEKSRFLAQASHDLRQPIHSIGL
FTACLRESRLGEEERRLVDSIDRSLLNVSQLFRSILDLYTLDNGRILPRL
QTLELGEWLADLIRQNAEAARWAGVELRLRPCEHWVRTDPALLATMVQNV
LSNCFKYGAHRPVLIGVRKRGAGLAIAIYDRGSGIAEEHLPKVFEEFYRV
RQLRDKDVEGVGLGLSIVRRLGQLIGVDVAIRSRLGHGTAVTLYGLPLAS
PQVPVNREEARQVGLLTGLKVCLVEDDRNVLLATSALLERWGCLVQAELS
GQGLVTDCDIIVADYDLGSHSTGIECIDEVRRQRGYAVPAMIITGHDIEK
IQAALHDRQIAILSKPVRPAELRATLRALRDRQTEAVSAYTDSPA
>Pfl_0623 Putative diguanylate cyclase (GGDEF domain)
MTEPEDPSRERLKHHFAQRVIHQARQILEIWQRLQRSEWSTADLAELSEA
NLRLLRFAERFEQPEHTQLARHISQSLEAVDANRGRLSSGLITDLNRLMQ
RLSRTGLRHGDQLDQTFLPPLRKPIYVMLQDHDRAERLAKQLEFFGLSAQ
ALDSVSAFRSSMVERLPAAIVMDVDFSGAGVGLKLAAEAQQGLEEPLPLL
FFSLHETDTPTRLAAVRAGGQEFLTGTLEASSLLEKIEVLTCVAQYEPYK
VLIIDDSRAQALHTERLLNSAGIVTRTLIEPIQAMAELADFQPDLIILDM
YMPACTGTELAKVIRHNDRYVSVPIIYLSAEDDLDKQLDAMSEGGDDFLT
KPIKPRHLITTVRNRAARARNLKARMVRDSLTGLYNHTHILQLLEDCSFR
ARRENKPLSFAMLDIDHFKRVNDSHGHPMGDRVIKSLALFLKQRLRKTDF
IGRYGGEEFAIVMPDTDIEAAHKVLDEIRQRFAEIHYPAQPQDLWCTFSA
GVVEMHDDSDSLMMASQADEALYRAKGEGRNRVQTARDSKQSATFSSDST
QSVITV
>Pfl_1323 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain
MESRDSAPLASYIDLLLDAVCAVDKQGRFVFVSAASERILGYRPDELIGQ
SMIDYVYPADRERTLAAASDIMGGEPKHNFENRYVRKDGSVVHILWSARW
SEVDQLRIAVARDITERKLAESRQAALYAISEAAHAAEDLLALFKRIHLI
IGEWLPALNFSVALYDEHCAQLNFPYHVDDDELQPEQPGTVTGRLCAEVI
RSRQPILLTPDCPHAPPEFAALVAGQQSPCWLGVPLSSKDRTIGALIVKS
LAGGERYTERDKELLQYVCAQVATAIERQQLHARLRRMAQYDQLTQLPNR
ELLRDRLKAALNHAREQSGHMALLYVDLDRFKQVNDTFGHGVGDMLLQAV
ANRLKGCVRETDTVARIGGDEFVVLLHSVHAADDADSVAEKIRQVLVQPM
RLDGHNLHIEPSIGVARYPEHGDEEQQLFRHADQVMYAAKRQNHKRLDS
>Pfl_0047 Multi-sensor Signal Transduction Histidine Kinase
MKLAMKLRTRLFLSISALITVALLGLMLGLVSVMQMAGTQEALIRNNFVT
LDLGLKLRQTLGDQLIMMLAEKPDPVAFEASKQHYFQLLDEGIAQEQKDD
DRQYGFSQAKADYLSFLQAFDISRDPAAALSGGGDLRERFNTLRNGLITE
HKHALNNINSVQHAARDRALLIAGLLGLVGLAVLIIGFVTAQGIARRFGA
PIEALAKAADNIGQGNFEVTLPVSSAMEINLLTRRFGLMAEALREHQATN
VDELLAGQQRLQAVLDSIDDGLLMIDRQGRLEHLNPVAQRQLGWDSDRFG
EGLGTALQRPELDAQLQLVLRGGTLERAPEDLSIEVDGESRLLTYSLTPV
SHTQGHILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFG
LFRERAKFPEESRESDLLDTVNEEMQRLMQLINDLLNFSRYQSGLQKLTL
APCSIEELLERARLRFADSAAQKGVALNVEAQGSLPRLQADQAQLDRVLD
NLIDNALRHTARDGLIRLQARRHGERVIISVEDNGEGIAYGQQGRIFEPF
VQVGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQGTQFYMALAV
>Pfl_4261 Response regulator receiver domain protein (CheY)
MLSYHQKSFLIVDDFSDFRSSVRSMLRELGVKDVDTADTGEQALKMCAQK
SYDFILQDFHLGDGKKNGQQVLEDLMMEKLISHEAVFVMVTAETSQAMVL
SALEHEPDAYLTKPFNRSGLAQRLERLEQRKTLLKPILQALDRGKPMEVL
NACIALCKQDIRYSPLCLRYRADALRDMNQNEALERLYDSIIADRPLPWA
FAGLGKLLFKRGQVSQAKGVYEKALKVFPMMPALYDGMADVLVAEGDTKG
AQQVLEEAIRLSPLAVRRQALLGKLAMANEDFDTASRAYRQAVNQGAQSR
FKDPESNLGLAHALISKGSERGLDTRTRLEINTTLSAVAKENPTDPGLQI
RARLMKATSLLLNDAETAEKLTEQALMRLDGMEQFMSPEAALLVAKQLQM
LGQAEAGTSMLKSCAEIYGDDPTVMKDIAKLTDDPTILSSSNAAADLNRQ
GVRVYKTGNLVEAREVFRKALKMQPKNISIALNMAQSLLHGTDTNVPSAE
LEECRACLKLVGLMPDTDARYPRYQKLKSKAFGE
>Pfl_0640 Two Component Transcriptional Regulator, LuxR family
MVSFGPGMEWHVNKLTSAVKVLVVDDQALIVEELCEFLESSGYRCVPCES
SSEAVTRFSEDPAIGLVLCDLHMPDMDGIELVQALQGVSGKSRAFEAIML
TGRADKQDVIKALRAGIADYYQKPVDLDELLEGLRRQETVLQERQKTLQL
GHLNQKLQDLSSSIDDLYQDLDKVRRGPAPAAQTVAEGDSAEIPAIFEQL
SPRQLDVARLVGKGQTNYQIACELGITENTVKLYVSQVLRLTHMHNRTQL
ALALAPGSSSAVRRGVTAH
>Pfl_5703 Periplasmic Sensor Signal Transduction Histidine Kinase
MNLALRWPRTLASRLSLIFLIGLILAQALSFSAQYYERYESAKDAMLGNL
ETDVSTSIAILDRLPAEERPMWLKRLARKNYGYLLSGGEPGTPLDPQDVP
IAVTSITDAIGEAYPLTFTDIPGPKKHFQGHLRLSDGSPVTIDVRPSMVP
LSPWLPVVLLGQLALMLACTWLAVRIAIRPLTRLANAVETLDPNTNAIQL
DEKGPNEVVYAVRAFNAMQARITTYLKERMQLLAAISHDLQTPITRMKLR
AEFMDDSVEKDKLWNDLGEMEHLVREGVAYARSIHGSTEESRRTNLDSFL
DSLVFDYQDMGKEVQLNGKSDAVIDTRPHALRRVLVNLTDNALKFAGAAE
LLIQRDRNGLSIKVMDRGPGIAEEELAQVMEPFYRVENSRNRSTGGTGLG
LAIAQQLALALGGSLTLSNRDGGGLCAELRLPLES
>Pfl_4654 CheW protein
MSSNKARADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLTKLPESHPHV
KGIATLRGASLSVIDLSRAIGERPLEDPNGGCLIVTDVSRSKQGLHVQAV
SKIVHCLTTDIKPPPFGSGGSRAYITGVTSVDGTLVQVLDIEKVIHGIAP
AQIEMAPTELSMEDAEVLGNARILVVDDSQVALQQSVHTLRNLGLQCHTA
RSAKEAIDCLLDLQGTAQQINLIVSDIEMSEMDGYAFTRTLRETPDFAHL
YVLLHTSLDSAMNSEKARLAGANGVLTKFSSPELTHCLIEAAKHVAAQGH
>Pfl_4245 Two component Transcriptional regulator, Winged helix family
MEQEAWQVLIVEDDQRLAELTREYLQANGLRVEIEGNGALAAARIIKEQP
DLVILDLMLPGEDGLSICRKVRDRYDGPILMLTARTDDADQILGLDLGAD
DYVCKPVRPRLLLARIQALLRRSDTLEAPAGNPRRLQFGPLVVDNALREA
WLSDSGIELTSAEFDLLWLLVSNAGRILSREEIFTALRGIGYDGQDRSID
VRISRIRPKIGDDPDHPRLIKTVRSKGYLFVPEACAELPL
>Pfl_5303 CheW protein
MHERQHSQRASQLTGLLLPLADRNLILPNVAVAELIDYQSSAFDLDTPPW
YLGRVTWRERQIPLLSFESACGNKIVIGERARIVILNALGGRPELKFIAL
LVQGIPRSYKLDSQLSYVDVPLCALEQAAVQVGEQVAKVPDLLALETLLV
DAGLV
>Pfl_5704 Two component Transcriptional regulator, Winged helix family
MEHVDHILIVDDDREIRELVGNYLKKNGLRTTVVADGRQMRSFLEANTVD
LIVLDIMMPGDDGLLLCRELRSSKHRATPILMLTARNDETDRILGLEMGA
DDYLTKPFAARELLARINAVLRRTRMLPPNLVVTESGRLLAFGRWQLDTS
ARHLLDKDGTLVALSGGEYRLLRVFLDHPQRVLSRDQLLNLTQGRDADLF
DRSIDLLVSRLRQRLLDDAREPAYIKTVRSEGYVFSLPVEILGAPA
>Pfl_4663 Two component Heavy metal response Transcriptional regulator, Winged helix family
MRVLIIEDEEKTADYLHRGLTEQGYTVDRARDGVEGLHLALESDYAVIVL
DVMLPGLDGFGVLRALRARKQTPVIMLTARERVEDRIRGLRDGADDYLGK
PFSFLELVARLQALTRRSGGHEPVQVSIADLWIDLISRKATRAGTRLDLT
AKEFSLLSVLARRQGEILSKTAIAEMVWDINFDSDANVVEVAIKRLRAKL
DGPFDEKLLHTIRGMGYVLESRGVQ
>Pfl_4423 Multi-sensor Signal Transduction Histidine Kinase
MPLRQRLENLPVGQKLLAALLVLLTTVLLVANLTFISAAYYISQESMAPQ
ALQTIGRLVSNPSLVAEALQSPQSAERLLKELDSYSPLRAAALYDGKGER
LAQLQHGDKLNLPERYRHIEAWQLTEFRSNQLITLPRPGTAPGHLLLVAS
SELPVAFYTGTLTASLGILIFSVLLWLVIARQIKRLITRPIHQLEELSRQ
VTREENYALRASRGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAA
YDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL
IALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFEPLKPFLPQLKQTV
EQHTVAKIERVTWFKDDEPKHYALTFYPLMGGAGRGVVIRIDDITQRLSL
EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPDLPKNL
EQAEQLGIELDTVNRYLQGREVPQLLDGIQQAGARAAKIVTHMLSFSRRS
NRQMAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPALGPVPG
TANELEQVLLNLLKNAAQAIHQREDDSEPGRITLRTRLNPPWAEIQVEDN
GIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSA
PGQGTCFTLRLPLAQPAPIAAETNQLPR
>Pfl_1056 CheA Signal Transduction Histidine Kinases (STHK)
MTPEQMRDASLLELFSLEAEAQTQVLSAGLLALERNPTQADQLESCMRAA
HSLKGAARIVGIDSGVSVAHVMEDCLVSAQEGRLFLRPEHIDALLQGTDL
LMRIATPANGPQPADIEAYVALMGGLLDPAAPAVVPAAQSAPPMAEFQLQ
PLPVVEPAPVEVSVEVTEPEPAPRKSKRTTEGGERVLRVTAERLNSLLDL
SSKSLVETQRLKPHLATMQRLKRMQNNGLRALESLNVHLKEHALSLEAQE
ALEDARRLLAESQQLLAEKNAELDEFAWQASQRAQVLYDTALACRMRPFA
DVLSGQVRMVRDLGRSLGKQVRLEIEGEKTQVDRDVLEKLEAPLTHLLRN
AVDHGIETPQERLLKGKPEEGLIRLRASHQAGLLVLELSDDGNGVDLEKV
RRSIVERQLSPAETAAQLSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDA
VQHMVRQLRGAVVLEQTAGEGSRFYLEVPLTLSVVRSLVVEVGDEAYAFP
LAHIERMCDLAPEDIVQVEGRQHFWHEGRHVGLVAASQLLQRPASQNSGE
TLKVVVIRERDAIYGVAVERFIGERTLVVLPLDERLGKVQDISAGALLDD
GSVVLIVDVEDMLRSVDKLLNTGRLERIARHGNQAAEAARKRILVVDDSL
TVRELQRKLLLNRGYDVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGI
ELVSLLRRDNRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDA
LLDAVVELIGGARA
>Pfl_2810 PAS/PAC Sensor Hybrid Histidine Kinase
MSDPLKSAPEKFNQEGEMDTLKHLSREALESEVKRLRAALQSTEVDNERD
ITARLHASQAALARSEARQRAVFESAVDFAMVVTDLGGYITEWNCGATNV
LGWSAEEVRGQSAACFFTPEDRAAGRVEQEMQRALVEGRAYDERWHLRKD
GERFWASGELMPLYDEDQTHLGFVKILRDRTQEHLYGRAIIETKERYRLA
VMATSDAVWDWDLQTNQIIWNQALQQAYGFALENVDPSGDWRFARIHPQD
QARVQASIHAAIEGDGTTWSAEYRFCCQDGSYAEVLDRGHLIRNQSGQAE
RMIGAMLDLTRSRSAETALRRSEERFSTILETIESAFAIVKVKFDANDEP
VDYYFVEANPAFERQCGVNLRGKWVTEFAPNLERFWFETYGHVAKTGEPA
NFENYANTFERWFDVRAVRVGDPADRQIAILFNDVTERRAAEDRLRASEA
IARENVERVQLALAAGAIIGTWHWDLLTDRFAIDEGFAQVFNLDPALGRE
GLSLEQVITSVHPDDRDSLTTAIDEAISRGGAYSHQYRVRREDGRYQWIE
ANGRVECAEDATPLRFPGVLIDVEERRTVEAERDRAIAALRSLNDTLEQR
VSSRTAELMQAEEKLRQSQKMEAVGQLTGGLAHDFNNLLAGISGALELMG
ARINQGRLNEVDKYMVTAQGAVKRAAALTHRLLAFSRRQTLDPRPTDVNT
LMTGMTELIQRTVGPSILLETIGSSVLWPTLVDASQLENALLNLCINARD
AMPDGGRITIETANRIMDAETAGALDMPEGEYVCLCVTDTGTGMSADVIA
KAFDPFFTTKPLGQGTGLGLSMIYGFAKQSGGQVRVHSQVDRGTTMCIYL
PRHRGDPVQSHDDKHIAPALVPKASETILVVDDEPTVRALLTEVLGDLGY
NLLEAGDSVAGLKVLQSNVRIDLLITDVGLPGGMNGRQLADAGREIRPNL
TTLFITGYAENAVIGAGQLGPGMQVLTKPFAVDTLVARVSELMCSRCE
>Pfl_4540 Two Component, Sigma-54 Specific, Transcriptional Regulator, Fis family
MNNDLSVLIVEDDPHVLLGCQQALTLEDIPCIGVGSGEEALEQVGDNFAG
IVISDIRLPGIDGLELLTRLKQRDRSLPVVLITGHGDISMAVGAMQKGAY
DFMEKPFSPERLVDVARRALEQRSLNREVSSLRRQLAERDSLEGRIIGRS
PAMQNLRELIANVADTSANVLIEGETGTGKELVARCLHDFSRRHTKQFVA
LNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHADGGTLFLDEVESM
PLPLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDESSKAGEFR
SDLYYRLNVVTLELPPLRERREDILQLFEHFTQQSALRFDRALPELDNQT
LSSLMSHDWPGNVRELRNVAERFALGLPAFKKTGAGSAGQGLAFAEAVEA
FERNLLSDALQRSGGNLTQASLELGMAKTTLFDKVKKYGLSH
>Pfl_5575 Serine/Threonine protein kinase
MTEIESSVDDLLMSEEQANNLTYFAFAKQHNAEPALAPTKASVGALPDVL
AGRYHLERLLGAGGMGAVYRARDLLHEQFGDPDPYIALKILSEEFAESPD
ASALLYSEFALTRRLRHDNVLRPHTFEVDTDCQRAFITMELMRGLTLDKL
LCERPLGLPWKELRDIALPLLDALAYAHRRGVLHGDMKPSNVMLSEDGVR
LFDFGLGQAEEGILPGLPHLSRERFNAWTPGYAAPELLEGQPLSASADVY
GVACVIYELAGGKHPFRRLPSTQARDEHLERELQAPANLPTHCWPALRTA
LAFDAAERNISAEQLRDALGATSSWLQRLRLRA
>Pfl_1364 Sigma-E regulatory protein, MucB/RseB
MRAIPLLSLLLSGWFIVPAHADEAQDWLTRLGQAEQQQSFHGTFVYERNG
SFSTHNIWHRVQNGQVRERLLQLDGSAQEVVRIDGHTQCVSGTLIAGLGD
SPNSAARPLDPQKLKNWYELAVIGKSRVAGREAVIVSLTPRDQHRYGFEL
HLDKETGLPLKSLLLNDKGQLLERFQFTRLDTSEIPSDKDLQANSDCKTV
TLDSDKASAVKTAQVWRSDWLPPGFELTSSSSHKDPETKTQVNSLMYDDG
LARFSVFLEPLNGATVTDTRTQLGPTVAVSRRLTTPQGEMMVTVVGEIPI
GTAERIALSMRNDGAATSKQ
>Pfl_2653 Possible circadian clock protein KaiC
MRGHFLSTSNALISAKAATGIEGLDDILAGGLSRSHVFLLEGEPGTGKTT
VALHFLLAGARAGERSLYITLSETERELRQGAASHGWELNENIEIFELTP
PESLLNAEHHQSLLYSSDLELGEATKQIFEVVERFKPTRVVLDSLSEIRL
LAQSSLRYRRQILAIKHYFVRYDATVLLLDDLTTESLDKTVHSVAHGVIR
LEELTPNYGAERRRVRVIKYRGQKYRGGFHDFTIMGDGVHVFPRLVAAEH
RGDYPRLQLSSGIKEMDALLGGGIETGSSTLILGPAGTGKSLITMIFAAA
AVARGEKAALFIFDEELGLLFERMNNIGIDLKALQATGNLLIEQVDAAEL
SPGEFSHRVRRCVDEGDIKTVVIDSINGYQAAMPEENALVLHMHELLLYL
NRKGAATFMTVAQHGLVGDMQAPVDITYLADTVILLRYFEALGKVRRAIS
IIKKRTGSHESTIREYRISKRGMTIGEPLDAFQGVLRGVPTYLGASNPLL
KDDNL
>Pfl_5188 Putative FecR
MSPASSRPVPAHVLDAAIAWQLTLDSSTPLEREEFAKWHAANEEHARAWR
QLGMLDQRFSVAKGPARSALLQSREGIRRRVRKLGSGLASVVAVVGLALF
AGERYLPLDYWLADQRTSTGEQRTVRLADGTVLNLNTHSAVDVRFDDKQR
LIVLQEGEILVETGHGDARPFIVETAEGSMRALGTRFLVKREDAGTRLSV
LQSAVAAHPQSDPQEQILREGQQVLIRNNGLDSVVALTPGADAWTRGMLV
VDNARLEDLVHELGRYRRGHLGIAPEVADLRITGSFPLHDTDKALNALLP
TLPVQIEQHTPWWVTVAKADPKP
>Pfl_1887 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MPKSVDRIPPMPRIQAIDPRRSEQSWESAPQLLAALNGARLGAWYWDIER
GQISWSRGTQALFGFDPRQPLPEDLEYLDLLPPEDRAKTIRAFHAVIAGA
PLEQAMHHRIRWPDGSLHWLEINGSLLPDKHGRPRMIGVIREITHQRQRE
QALSSSEKRFATLFHLCPNMVLLTRQEDGLISEANQYFESLFGWPVQSAI
GRTTLELGLWVHPEQRAELVKKTKAKGELVSMEVQFRASNGQIHDGILSA
QKVELEGQPYLLSTFLDTTERKAAEHALKDSQERLDLALDSAQLGTWDWH
IPSGMLYGSARAAQLHGLEPKPFHESFEEFFEGVPGEERDSMRDAYRSLR
EGPAGNYQLTYRVQLPDGSSRYLESRARLYRDDNGVPLRMAGTLLDITDQ
VEREQRLVASEEKFATLFQVSPDPICVTRQETGEFIEINSSFSQTFGWSA
SDVIGHTAEEIGLWDASAKSLQRIERVIREQGLSNVAIIVQHKDGQSLTC
VISSRQISVGNQPCIVTTLRDITQQQRSEAALKASEEKFAKAFHSSPDAI
TITERDTGRYLEVNDGFCRLTGYRADEVVGKTVYQVGIWAEEKQRSALLA
ELQIKGRVHHQEMLGRNKRGEILTVEVSVEPITLNETACLLLTARDVSLL
KNAEAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDL
DHFKHINDSLGHPVGDTVLKIITARLEASVRMEDTVARLGGDEFVVLLSG
LEGTRNEVSAQVRELADTIRELLSEPMFLDGQRLQVTPSIGVALIPDHGS
TPTDLLKRADIALYRAKDSGRNTTQMYHNTMQKAASERLRMETDLRLALS
RGEFDVHYQPQIDARDNRIIGAEALVRWNHPELGAQSPTEFIKVLEDSGL
ILEVGTWILDEACEAFKQLIAEKLIDPLAFSLCVNISPRQFRQNDFVERI
EHSMSSHGLPCSLLKLEITEGIVIQNLEDTISKMRRLKKLGVSFAMDDFG
TGYSSLTYLKRLPVDTLKIDQSFIRDATTDPNDAEIIRAIVAMARSLELE
VIAEGVETPEQLAFLQGLGCHLYQGYLHSRPLPLEGLKGLLE
>Pfl_0867 Anti-Sigma-factor antagonist (STAS)
MTESAIRLDEASELQLSGVLDYRTGPDLREQGRALIKSCNAPALVIDCSA
VEKSSSVGLSLLLCFIRDAKAAGKAVSIRGMPEDMREIAQVSELTELLAQ
P
>Pfl_4091 BolA-like protein
MTMQQRIESTLALLQPEHLQVLDESHMHSRGLQTHFKAVVVSAQFEGLNR
VKRHQKVYGTLGELMGEFHALALHTYTPQEWAETGVAPASPTCAGGSKH
>Pfl_4198 Periplasmic Sensor Signal Transduction Histidine Kinase
MRARFDTLFGRLFGMLLVAIVLAHLLAFAWFRLYGPPPPPPPPEFSQNLD
GQQPAQDPRYPPRPPRPWFGGPIVPLTFQFISLIIAAWYGAKLLTRPIQR
LSDAAERLSEDLDSPPLDETGPREARQAAHTFNLMQHRIREQVQQRARML
GAVSHDLRTPLSRLKLRLENINDDKLQGQMRQDLDDMIGMLDATLTYLHE
QRTSEALQLMDVQALVESLCENAQDQGADVQVSGHCAPLQVQPMALRSCI
NNLMDNALRYAGQAHIELQDQREQLLIRVIDHGPGIAADKREAVFEPFFR
LEGSRNRNSGGVGLGMTIAREAAQRQSGQLTLAETPGGGLTAVIQLPRR
>Pfl_0375 extracellular solute-binding protein, family 3
MKKYLSMLLVGVTALVAVNAAQAGAIDDAVKRGSLKVGMDPTYMPFEMTN
KRGEIIGFEVDILKAMTKAMGVKLELVSTGYDGIIPALMTDKFDMIGSGM
TLTQERNLRLNFSEPFIVVGQTLLIRKELEGTIKSYKDLNTADYRITSKL
GTTGEMVAKKLISKAKYHGYDNEQEAVLDVVNGKADAFIYDAPYNVVAVN
KVGAGKLVFLDKPFTYEPLAFGLKKGDYDSLNFINNFLHQIHEDGTYDRI
HDKWFKSTEWLKDME
>Pfl_0260 Two component Transcriptional regulator, Winged helix family
MSSTAQTAEGEKILIVDDDPGLSSLLERFFVSKGYRARAVPNTEQMDRLL
SREVFNLVVLDLMLPGEDGLTACRRLRGANNQIPIIMLTAKGDELSRIKG
LELGADDYLAKPFNPDELMARVKAVLRRQAAPVPGAPGSEEENVTFGDYV
LSLATRELKRGDEVHMLTTGEFAVLKALVMNARQPLTRDKLMNLARGREW
DALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVPDGNSTK
>Pfl_4308 chemotaxis sensory transducer, Pas/Pac sensor
MIFNRHKTVLVDLQNTINQQAGLLEAINRSMAVIEFDVDGIVLRANDNFL
KTMGYTREQVVGQPHRHFCSPEFARGNQYTELWSRLKSGQFQSGTFERID
SQGRPIWLEASYNPIKDDSGRVVKVVKYAMDVTAKVQQESEANAKLQAID
RAMAVIEFDLDGNILTANQNFLTRMGYTLAELKGKHHRLFCPAQLVNSSA
YQDFWRRLNQGELFQGQFERVDKRGQTVWLEANYNPVYDAAGRLCKVVKF
ASDVTARVEQHEQDARSASAAYHISVATRKVAEQGTQVIQQAASEMREIA
DDIAESSTLIAQLGERSEQITAIVNTIRAIADQTNLLALNAAIEAARAGE
QGRGFAVVADEVRQLAARTSGSTAEISNMISLIQTETRQAIKSMDGTRGR
AAQGVELADQAGTVILQIRDGASEAVEAVSMFANERAPG
>Pfl_4172 Protein tyrosine phosphatase
MRVLFVCLGNICRSPTAEGVLRHKLREAGLADQVEVASAGTGDWHVGNPP
DKRSQAAAKLRGYDLSAQRAQQVSRADFASYDLILAMDNSNLRNLKALQP
STGKAELDLFLRRYAGVVDEVPDPYYDGDQGFEQVLDLIERACDQLLIEV
KGRL
>Pfl_2377 Protein tyrosine/serine phosphatase
MFPRFLCSLSVLSLSIAAVHAADLDTPRLQGIDNFRDIAGITTAYSTTHD
GTMRAGVFYRSNALTPTASDLATLNGLGIKAVYDLRTPSEIAGTPDTMIS
GATYQNIDIIGATTSGANITTVSFKSAADAIAMMQQTNRAFVSDAGMRGQ
LGVLFNELAGVDGAALFHCTAGKDRTGWTAAVLQSIAGVDDATIMSNYLA
TNDYTAARVAKTLAMMPPSMAAIYAPLLGVEASYLQAGLDQVSAQYGSMD
NYLKQGLGLSQETIYVLRGKMVEYNSLPGQAGLIGNAAAGAQLLQELQNS
KLSGTYSAYNYYLQSAIDAGTLSGVESTVGGQVHADAASYLLRQNAMIEQ
AAAPFASGTDLKVGQYRLWSTALAGYLGTDGSAHAQSSNEHSQGLMVGVT
QRFSEQLSARGGIGYSKGSVGGAGGETDTDFTFLDLGARYGFTSLERGLF
VDANISAGYVDYDSKRDLGGGLGSAKGDTHGNLSGATLALGYRMPMNDVV
LEPSLGVRVSRLDLSGFQEKGSELALNVDDIQETRRSAVANLDVSFAPMS
MGAWQLVPGVRVGYEHVLGDHQVDSEGHLLGLDIEQRAAFDNRDQFSGGV
NLMANLGALSLGAEVGASGGGDSHGFSGGLKASYQF
>Pfl_0340 Signal transduction histidine kinase, nitrogen specific, NtrB
MTISDALHRLLLDNLTTATILLDSELRLEYMNPAAEMLLAISGQRSHGQF
ISELFTESTEALNSLRQAVEQAHPFTKREAMLTALTGQTLTVDYAVTPIL
SNGATLLLLEVHPRDRLLRITKEEAQLSKQETSKMLVRGLAHEIKNPLGG
IRGAAQLLARELPEDSLRDYTNVIIEEADRLRNLVDRMLGSNKLPSLALC
NVHEVLERVCQLVEAESQGCITLVRDYDPSIPDVLIDREQMIQAVLNIVR
NAMQAISSQNELRLGRISLRTRAMRQFTIGHVRHRLVTKIEIIDNGPGIP
AELQETIFFPMVSGRPDGTGLGLAITQNIISQHQGLIECDSHPGHTTFSI
FLPLEQGATST
>Pfl_5307 Response regulator receiver domain protein (CheY)
MARILIVDDSPTEMYKLTGMLEKHGHEVLKAENGADGVALARQEKPDAVL
MDIVMPGLNGFQATRQLTKDAETSHIPVIIITTKDQETDKVWGTRQGARD
YLTKPVDEDTLIKTLNNVLAG
>Pfl_2646 Multi-sensor Hybrid Histidine Kinase
MSSPSSVDEQRFRKLLSRNVSLPLGVGVISAVFFVSLITYLLSVIQWVEH
TDRVINNANEAVKLTVDLETGMRGYLLSGDEHFLDPYETAKPRIAVALNT
LLELTADNPAQTDRLRRLQALQTEWATYAQSMIDLQRASGDYKSAVKAGK
GKRLTDEIRKQFEDVIETEQLLRASRNEDVRRTTIWSISLYLLFVAGISG
LLAYVGRRDLVNLSQSYGATLAAQEASAKRLEQQAWLRNGQTQLAEQVLG
QLTVNLLGRNILQFCAQYLGSAVAALYVREEHGGLKRVATYGFSREQEQQ
NQSIYSEEGLVGQVAQQARLIRLDSVPSDYFKVSSGLGEGLPRSVLVVPT
SDDERVNGVIELGFLRPLTDRDVALLELIAGNIGTSIEAARYRQRLQEVL
AETQQLNEELQVQQEELKTANEELEEQSRILKESQAHLETQQVELEQTNE
QLAEQAQTLAEQRDAMDQKNTELNQAQVQLEERAEELQRSSKYKSEFLAN
MSHELRTPLNSSLILAKLLAENPQENLSAEQVKFAESIYSAGNDLLNLIN
DILDISKVEAGKLEVMPENTSVARLADGLRGMFEPLAAVKQLAFSVQLQP
DAPSTLFTDRQRLEQVIKNLLSNAVKFTEHGTVSLTIAGQPDDRIAFIVR
DSGIGIAADQQESIFEAFRQADGTTNRKYGGTGLGLSISRDLATLLGGSI
SVSSAPGQGSVFTLVLPQHYREPGDAPVAPLTFSPPAAAPVMASAVAVSP
LASVEIPRFNDDRDKAPFNTRCILVVEDEPNFAHILYDLAHELGYQCLVA
HGADEGYDLAKEFVPDAILLDMRLPDHSGLTVLQRLKEHAGTRHIPVHVI
SVEDRVEAAMHMGAIGYAVKPTTREELKDVFARLEAKLTQKVKRVLLVED
DDLQRESIARLIGDDDIEITAVGLAQDALELLRTTIFDCMVIDLKLPDML
GNDLLKRMSTEDICSFPPVIVYTGRNLTRDEEADLRKYSRSIIIKGARSP
ERLLDEVTLFLHKVESQLSHERQKMLKTARSRDKVFEGRKVLLVDDDVRN
IFALTSALETKGAVVVIGRNGREAIEKLNEVEDIDLVLMDVMMPEMDGFE
ATMEIRKDPRWRKLPIIAVTAKAMKDDQERCLQAGANDYLAKPIDLDRLF
SLIRVWLPKMERI
>Pfl_1532 Sigma-54 Specific Transcriptional Regulator, Fis family
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSR
EVICVLIGTVNAPGALLGLLKTLSTWDEFLPVLLMGDNSSVDLPEDQRRR
VLSTLEMPPSYSKLLDSLHRAQVYREMYDQARERGRHREPNLFRSLVGTS
RAIQHVRQMMQQVADTDASVLILGESGTGKEVVARNLHYHSKRRDAPFVP
VNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDM
PLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEIGTFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAI
MSLCRHGWPGNVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQM
VDSLRSDLEERVAINGHTPDFTANAMLPPEGLDLKDYLGGLEQGLIQQAL
DDANGIVARAAERLRIRRTTLVEKMRKYGMSRREGDEQADD
>Pfl_2458 Periplasmic Sensor Signal Transduction Histidine Kinase
MSIIKRRAQLLCSDAFAWLCAIAVGSMIYITNAYLDLDVAPTLFYITLVF
MSANIFPVPVFLAVALGCLTLLTADFLVDEGYRDHRSIAGFVRCLIALTT
ISLLALRSKRATETLRRKEAFFLGAQKLTHTGSIGFIIDKKVSVSWSQES
SRIFEYSPDVTPTLALVKSRTHPDDLPVIDQVLEQFARRQELVEVEHRLL
MPDGRIKHVQMIASPLPRHRGRTQYAGALMDVTASKQSEEALFHSQATLA
HVTRLTSMGELAASIAHEINQPLAAVITSGESCKRWINRPEPNLEEARRS
LDRIIQNSVRVSDVIACIRALSRHSEVQRNVEVFDDIVSDSLTLMQHDIS
FHEVRPHARLGTHGARIKGDRVQLQQVIINLIINACQAMANVLDRARTLR
ITTSILHNEAVLEIADSGVGIAEDILPSLFDPFFTTKPTGLGMGLSICRS
IIEFHGGRIWVNSTEGVGTQFVFAIPLAALEHDQ
>Pfl_1481 Periplasmic Sensor Signal Transduction Histidine Kinase
MRSLFWRILASFWLAIALVAGLSILLGHMLNQDAWILSRHPGLNTLAAEW
TQTYEAQGENAAQDILEQRKRQYHIDVQVLNESGDPVVRGTFPRRAAAFE
ARQNNDDRRLPWRRLTDEFTSDKSGDTYLFIYRIPHPELDAWHRESLLWP
LSALGIALVVLTLFSLLVTFSITRPLSRLRGAVHDLGQTTYQQNSLAQLA
NRRDEFGVLANDFNRMGARLQSLIGSQRQLLRDVSHELRSPLARLRIALA
LAERASPEEREKLWPRLTRECDRLEALISEILVLARVDADNASAEDVDLN
ALLATLQKDAQLGSPEQTVRLEAEPALNLTGWPTMIERAVDNLLRNAQRF
NPVGQSIEMQASRQGERIVVSVRDHGPGVQAEHLSQLGEPFYRAPGQTAA
GHGLGLAIARRAAERHGGTLVLANHPQGGFVASLELPLVPGAVVQP
>Pfl_5709 Response regulator receiver domain protein (CheY)
MEKPLLVAVIDDDESVRESLPDLLNEFGFAVQAFSSARAFLTSAHVADTR
CLILDVAMPAMSGPELHKTLKLHGHAIPVIFITAQGDAGERQKLLRNGAV
ECLMKPFSEAQLLTALSAALPVD
>Pfl_3770 chemotaxis sensory transducer
MSLRQLSIQWKITLLAGLCLAGIVTLLVGLSLYRMEHSSELVKASSMEML
TESAQARIESQGEVQAAGIRQQFMDAYQYGHGFSRQVLFLREQAEKRFLD
AFDLREDMTRQVKSALQANPDLLGLSLVFEANALDGKDELFAGQAELGSN
DKGRFALYWSQPTPGKVTSMALPESDMADTSTGPSGQAANAWFTCPRTTL
KPCVIEPYFYVIDGQKVLMTSIVFPLMVNGKVIASLSVDINLNSLQAISQ
SASKKLYDGQTAVSIVSPAGLLAGYSPDANKLSQRLDAVDTTSGAELLRL
LASNQTVSSLHSNAQLKVLSPFQPIPGGPSWGVLLDVPEKVLVERAEALK
QQLDASNTSGTLIELSLGVLAALIGLLLVWLMARSVTKPILGVAHMLEDI
ASGEGDLTRRLAYDKKDELGQLAGWFNRFLDKLQPIIAEVKRSVQDARNT
ADQSSAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQAAEAA
KDADRATRQGLTVIDRTTASIDTLAADMSAAMVQVEGLAANSEKIGTVLE
TIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEE
TRQVIEQLQNGTQDVVGSMGNSHRQAQGSVEQVGQAVTALRQIGDAVTVI
SDMNLQIASAAEEQSAVAEEINNNVATIRDVTESLSGQANESARVSQSLN
SLANQQQSLMDQFRV
>Pfl_0468 Lipopolysaccharide kinase
MKLMLAEPFKSLWAGRDPFAEVEGLQGEVYRELEARRTLRTEVDGNGFFV
KIHRGIGWGEIFKNLLTAKLPVLGAGQEWKAIQRLQEVGVPTMTAVAYGE
KGSNPADQHSFIVTEELAPTISLEDFSIDWVKQPPQPKLKRALIAEVARM
TGMMHRAGVNHRDCYICHFLLHTDKPVTPEDFKLSVIDLHRAQTRPAITQ
RWRNKDLAALYFSALDIGLTRRDKLRFLKGYFQQPLRRILAEEAPLLSWL
EGKANKLYARKQRYGDAL
>Pfl_4084 Putative diguanylate cyclase (GGDEF domain)
MKSPSQTTAIDFDSAKLQRLGFGQQPPLLARPVSLAQLRQQMSLQLQTSL
EPQRILGLFFREVQRLVPLDALTYVHNGCDLRLEFGARGHHSASYRLSHE
GEHMGELVFRRNQRFSEQELGNLESLLSALLYPMRNALLYRAATQSALRD
PLTGAGNRIAMEQTLHREIEMSRRHLQPLSLLMLDIDHFKQVNDLHGHSA
GDDVLKAVAASIKGQLRNVDMVFRYGGEEFLILLSNTGRDAAAMVGERLR
QAAQAQDYYANNQLIELTVSLGCSTLLPGESADSLLRRADSALYVAKREG
RNRLTMAG
>Pfl_4884 conserved hypothetical protein
MSEHPSERRRFKRIAFDARTELSQGEYIWPVKLIDLSLKGLLIERPEPWL
GNPEQDFFVDIHLSEDVHIEMDVQLAHEDHGQLGFVCRHISLESIQRLRR
LIELNLTDETELERELGALIDV
>Pfl_4217 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
MVQVRAHQPINTDGSINLEAWLDHAVSVDLALDREALKEACEYARQAEQQ
SNAAKNLWSEGSGSFSTGLEIAEILADLKLDQDSLVAAVLYRGVREGQIE
LAAVSQRFGPVVAKLIDGVLRMAAISASLSPRQSMVLGTQGQVENLRKML
VAMVDDVRVALIKLAERTCAIRAVKTADDEKRNRVAREVFDIYAPLAHRL
GIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDRERFIADVMTQLKDE
LQATGVEADISGRAKHIYSIWRKMQRKGLEFSQIYDVRAVRVLVPEMRDC
YTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIR
THSMHEEAELGVCAHWRYKGTDVKSGSNHYEEKISWLRQVLEWHEELGDI
GGLAEQLRVDIEPDRVYIFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCR
GAKINGRIVPLNYSLQTGEQVEIITSKHGTPSRDWLNPNLGYVTTSRARA
KIVHWFKLQARDQNVAAGKTLLERELNRLGLPAVDFDKLADKANMKTAED
MFAALGAGDLRLAQLVNLAQQLVEPERGNEQLELIPRKATGYKPGKRGDI
QIQGVGNLMTQMAGCCQPLPGDAIVGYITQGRGVSIHRQDCASVLQLAGR
EPERIIQVSWGPVPVLTYPVDIVIRAYDRSGLLRDVSQVLLNERINVLAV
NTRSNKEDNTALMSLTIEIPGLDALGRLLGRISQLPNIIETRRNRTP
>Pfl_1355 Periplasmic Sensor Signal Transduction Histidine Kinase
MHKPSSLRWRLLWNLALLLVVLMLASGLSAYWNGREAADTAYDRTLLASA
RTIAAGLSQRDGSLSADVPYVALDTFAYDSAGRIYYQVNDINQKLISGYE
NLPGPPPGTPRTDSYPALARFYDAKYQGQNVRVVSLLKAVSEPNMNGMAE
IRVAETDEARVSMARSLAADTLLRLGMLAIGALLLVWFAVSAALRPIERL
RTAVEERQPDDLRPLPLVEVQHELWPLVRALNHFTERLRGQFERQAQFIA
DAAHELRTPLAALKARLELGLRSNEPQTWRDTLESSAQSTDRLTHLANQL
LSLARVENGARAIAEGGAQLLDLSQLARELGMAMAPLAHARGVALALEAD
EPVWLRGEPTLLNELLSNLVDNALAHTPPGGNVILRVTAPAVLEVEDDGP
GIPLEERDRVFERFYRRNQQVAGSGLGLAIVGEICRAHLAQISLHDGEQA
GLKVRVSFVAG
>Pfl_3814 extracellular solute-binding protein, family 3
MTPGKPIHYTGPHLHCTSPISMTIRKSTMIFCGLLAMAGAAQAQEPASHL
DTIQQQGQLRVCTTGDYKPYTFKRPDGGFEGIDIAMAQTLADSLGVKVEW
VQTTWKTLMPDMQAGKCDIGVGGISVTLERQKKAFFSNTLDVDGKIPLVR
CADQSKYQTIDQINQPNVRLVEPAGGTNEAFVHAFLPKAQLALHDNVTIF
EQLLDNKADVMITDASEALYQQKLKPGLCAVNPSQFMQYGEKAYLLPRDD
ISWKLYVDQWLHLSKVTGKYQKVLSEWIAVPAAQ
>Pfl_0658 Protein of unknown function RIO1
MKTPKRIEPLIEDGLVDEVLRPLMSGKEAAVYVVRCGNQLRCAKVYKEAN
KRSFRQAAEYQEGRKVRNSRQARAMAKGSKFGRKEAEDAWQNAEVAALFR
LANAGVRVPKPYDFLEGVLLMELVADEYGDAAPRLNDVVLEPDQAREYHA
FLISQIVLMLCTGLVHGDLSEFNVLLTPTGPVIIDLPQAVDAAGNNHAFS
MLERDVGNMASYFGRFAPELKKTKYAKEMWALYEAGTLHPASVLTGEFDD
PEDLADVGGVLREIEAARLDEERKQAIRAADDEPKGKSDEPPPPPWMQ
>Pfl_3918 Sigma-54 Specific Transcriptional Regulator, Fis family
MQLLTLPPSPALATSIRATAQVFEDPKSQALLAHLQQVAPSEASVLIIGE
TGTGKELVARHIHNLSNRRNRPFIAVNCGAFSESLVEAELFGHEKGAFTG
ALSAKAGWFEEADGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRLGSRKS
IPIDVRVLAATNVQLEKAINAGHFREDLYYRLNVVNLELSPLRDRPGDIL
PLTRHFIEAYSQRLGYGRVTISPGAEHKLRGYSWPGNIRELENVIHHTLL
ICRNGVIERDDLRLSNLRIDRPDDQHATADDSPEALLERAFQKLFEQQAG
ALHEKVEDALLRSAYRFCHYNQVHTASLLGLSRNVTRTRLIKIGELAVNK
RRPTENLQGERLIQLSI
>Pfl_1534 Two Component, Sigma-54 Specific, Transcriptional Regulator, Fis family
MGIKVLLVEDDRSLREALADTLLLAGHDYHAVGSAEEALNAVEREAFSLV
VSDVNMPGMDGHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADY
LVKPFEPKALLDLVARHALGSLVASDAEGPVAVEPASAQLLDLAARVARS
DSTVLISGESGTGKEVLARYIHQQSHRASQPFIAINCAAIPDNMLEATLF
GHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQAKLLRVLQERE
VERVGARKPITLDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP
LRERTADILPLAERLLAKHVNKMKHAMAKFSSEAQACLIGYPWPGNVREL
DNAVQRALILQQGGLIQPQDFCLSGPALFAPLPAVVPVAPVIREVEIEVD
SAGALGDDLRRREFQMIIDTLRTERGRRKEAAEKLGISPRTLRYKLAQMR
DAGMDVEGYLFAT
>Pfl_1053 CheW protein
MSEITAKRSAAPVAKQALFLLFRIGSERYALRATEVAEVLPRLPLKPIAR
APHWVAGVFAYRGTVVPVIDLSALTFGHPAQARTSTRLVLVHYRAEDSQP
AQWLGLILEQATDTLRCNPDEFQSYGLDNRQAPYLGPVREDAQGLVQWVR
VNDLLDESVRTLLFPTPPLDPARLEEQP
>Pfl_4458 Two Component, Sigma-54 Specific, Transcriptional Regulator, Fis family
MLNSVMVVDDESSIRSAVEQWLSLSGFEVQLFSRAEECLAALPAHFAGVI
VSDVRMPGLSGLELLAEVQRRDADLPVILLTGHGDVPMAVEAMRDGAYDF
LEKPFSPETLLGSLRRALDKRRLVLENRALHEQADNRARLDATLLGVSRG
LQTLRRQVLDLATLPVNVLIRGETGSGKELVARCLHDFGPRADKPFVALN
CAAIPEQLFEAELFGHESGAFTGASGKRIGKLEYADGGTLFLDEIESMPL
AQQVKLLRVLQEQKLERLGSNQSIRVDLRIVAATKPDLLDEARAGRFRED
LAYRLNVAELRLPPLRDRREDIPLLFESFAQSAAQRLGRTFPPLSGAQLS
HLLSHDWPGNVRELANVAERQVLGLDEPVQGIDPGQSLAAQQEAFEAQCL
RAALTRHKGDVKAVLEELQLPRRTFNEKMQRHGLTREMFIPD
>Pfl_4551 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation
MSAQPGPINRRVLIVDDTASIHEDFAKILKSATVTDDSLDETENLLFGDP
TSAPAAPRDPFELDSAYQGREALDKVEAALAAGRPYAMAFIDMRMPPGWD
GLETIERLWQVDPKLQVALCTAYSDYSWEDIDQRLALTDRLLILKKPFDA
IEIRQLASALTVKWQMTEDAAMKMNLLEQAVQARTRELSDANIIVQNSPT
ILYRLRGEPSFPLMYISHNITRYGHVAADLVGSANWAQTLIHPDDQPSVD
AAMGRVLDRHAEGASIEFRLRTGAGDWRWVENRYIPVRDHDGRLLEVEGI
ILDITERRLAEEKMNLLARTDGLTGLANRATLIERLHQAFAAARRGAAPF
AVFYLDLDHFKRINDTLGHPVGDLLLQEVAQRIKSNVRENDVVARLGGDE
FAILQLDVSDPTQSATVATKIRDALSQPYHLTGNALHTSVSIGICLYRST
SLDADSLLAGADMALYRAKETGRNQYQFYSEQITREVAERITLAEELTTA
LIQGGLKLDYTPEVDMHSGRILGMAAQVKWQHPRLGLLPASAFVPAAEKT
GAIIPLGRWILDHACWQMRQWQNEGVAPPVMAIRISLAQLKSGPELIYDV
LRTTARWELAPWDLRFDVTEATLAQTKWTHNDVLPRLSELGVKIAIDDFG
TEYSSFDYLKTYRVNHLKLSQSLIDSAAQDEGSANTLRAIVNFARDLAID
ISAEGVRPTDRDDALASSAPLKNVQGVCFREAISPEQAARLLKGGNATAP
LPREDEG
>Pfl_0087 Protein tyrosine/serine phosphatase
MFLTRFSSVLCLSLLALFGWTSAQAADTLASRPVEWAQPVEVQYNLFQMS
PTLYRSALPDDGAVPLLNNLKVVTVINFLPEADSNWLKAPGIHQVQLPYR
TNHVDDSDVLKTLRAIQSAEAEGPVLMHCKHGSDRTGLMAAMYRIVVQGW
SKEDALNEMTQGGFGESGHFRDSVRYVMQADVDKLRTALANGDCSTSAFA
TCSMKSWFQTVNLK
>Pfl_0005 Two component Transcriptional regulator, Winged helix family
MRVAILDDEPAELRRVEQTLQQMAEAGGQPWSLHSFESGEDLLRQLRRET
FDLLILDWQLPDLTGLALLRWTREHMEAPPAAIMLTSRDGESDIVQALNA
GADDYVSKPFRPNELKARVAAVLRRHSLQRNAAADVLRFNDLVFDDAELT
VTRDGKPIVMTEREYRLAHCLFSNLGRPLSRDYLYERFWPHEEMSTSRPL
DTHIYRLRNKLGLTADRGWQLLTIYGYGYRLESVAAGE
>Pfl_3136 Anti-Sigma-regulatory factor (Ser/Thr protein kinase and phosphatase)
MDMNISGTLTQVLVIEDSSQIGHARRTAQRLAEQHGFGESDAGRVALVAT
ELASNVLKHAGHGELHLRLLPRQGDDGIEMIAVDRAQGFDLDACMADGFS
TGGTQGIGLGAVARQADVFDVFADHRGAVLLARLYPRSDRQVDMPYGVSQ
HSLHDDPACGDVWHLATHGADVSALIVDGLGHGEDAERAARAGEKAFALN
PFGAPTLLMEDMHREMIGSRGGAVAFAQFHADRASLSFTGVGNIGASLIA
SDKSRGLASHPGIVGGQYRKAQPFDYAHVNGHLLIMYSDGLQSRWNLQDY
PGLVHRHPAVIATVLHRDFCRGRDDVTVLVVALESAHD
>Pfl_2295 Putative diguanylate cyclase (GGDEF domain)
MKRDTHLVVLLLLVIGCSLASLTVWKVLASRERALEEVDVHGLNLTQALV
TYSEGIVRQSSALLLGLVERLETEGSGPVQIQRISSLIDRQEPLMPQLSG
ITIYDSQGRWLMSSNRPIPAGANSSDRAYFIHHRDDPSPETFIGPPIQSR
TNQEWVITVSRRFNDARGEFAGVVAVTLGIENFLRLFGKIDVGQEGAIGL
SYTDGTLLVRYPFREQDMGRNFSKSPIYAKYLVDHSVGTASFTSSLDGVE
RLYAFRKSDRLPLITTVALGKREALAAWRTEALLSAVVVTGLLALTGLIG
WFLILDIRRRTQVEAELMGTQQQLLSSNRQLELLAMKDALTGLANRRCFD
VTLDLEARRAQRDGTSLALLMIDIDYFKLFNDSYGHVAGDDCLQRVGNVV
ETCVRRPSDLVARYGGEEMGVIMPNTDSEGAQIVAQLILDRLQQANISHE
SSPLGRVSVSIGIATAAGSRLTPVQGLIEAADQALYSAKALGRNRSVKLP
GLI
>Pfl_5352 Predicted signal transduction protein
MSQELTTEQIQQSLQGISVPAQPQIMVDLQMEQYMPDPDLETIAKLISQD
PGLSGSLLKIVNSPYYGLSNKITSIKRAVNLLGSRSIINLINAMSIKGEM
NDDTIVTLNRFWDTAQDVAMTCLTLAKRVGTEASDEAYALGLFHDCGVPL
MLQRFPDYMTTLEKAYANASAERRVVDTENDVYNTNHSVVGYYTAKSWRL
PEHVSAAIANHHNALAIFSDETSRNSQMKNLLAILKMAEHICASYRVLGN
QTEDFEWQAVGPLVLEYIGLSDYDFETLKQTIRELGAH
>Pfl_3133 Anti-Sigma-factor antagonist (STAS)
MAALQNSTLDAIKNNQVQLLGEWIKGLQDSGASRNLKEHDLQQQTREFLQ
LVVSGLENDSGTNITAPGWEGMRQFLEKLSHSRAQLGQDSQQTASFIFSL
KGPLFALLQNHYQDQPALLAEQLWEISELFDAFGLYTIRTFQKSREAVIK
RQQEELLELSTPVVKLWDGVLALPMIGTLDSQRTQVVMESLLQRIVDTGS
EIAIIDITGVPTVDTLVAQHLLKTVTAIRLMGADCIISGVRPQIAQTIVH
LGLDLQGVVTKANLADALKLALTRLGITLTKTV
>Pfl_0228 extracellular solute-binding protein, family 3
MKTAKALFALPLISLALLAGCNKTEEPAKPKVASESTAPAGYLDKIKARD
KLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEFVAVE
PASRIPFLQSDKVDLILANMTVTPERKEAVEFTNPNLKVAVQALVPQGSE
VKKLDDLATRTTIVTTGTTADIWLTKNHPDWKLLKFEKNSESLQALANGR
GDAYAQDNLVLFSWAKQNPGYRVLDEKLGAEAPIAPAVKKGNIELRDWVN
AELAKLGEEKYLLKLYDQYVRKELSDDTKPESVIVEGGKWQG
>Pfl_3405 conserved hypothetical protein
MSARLFLTFGFALLAGCSFFGPKVDLDSLTLDVAPKANDDTPIAVDFIAV
NDPDLLKQLSGISARQWFAEREQYQRDYRQLMSVWGLELVPGQFIDRQPF
PLGGKRAAGLLVFASYNTPGAHRLRLDDQSDAWLKFDSREMSLVSKEN
>Pfl_4372 Periplasmic Sensor Signal Transduction Histidine Kinase
MPRSLLGRMLLLTLLAVLFAQTLSSVIWVSQLRATQLEGLVTSARSLAHS
MTASVSYFRSLPVAYRPLVLDQLRSMGGTRFVVTLNDKPLGMEVLPVTPR
KAAVLKAVDEVLRQSLGQDTDILVTFVSPDDLRIFNAGLKLDELPRSWAH
YALTLEPVNPPVLVTQIQLAPGEWLYIASLLPEPYTSLEEQGLPTQQVWF
IVFTSGFLLLFIGLLVHWQSRPLKRLARAARDLSLGADVEPVAEGGGSEV
VEVGRAFNTMRERISRYLTERSQLFSAISHDLRTPITRLRLRVELLEDET
LQTKFGRDLDELELLVKGALQCVKDTDIHENIEPVDLNHVLDCLVEPYLA
PAGNGRVTQQGRALAAYPGKPLALKRCIGNLIDNALKYGQNAHLHIDDDE
SAFVLHVDDEGPGVPEQRLEQVFEPHFRLAGQQQGYGLGLGIARNIAHSH
GGEVTLQNLREGGLRVTLQLPRSAD
>Pfl_0820 Periplasmic Sensor Signal Transduction Histidine Kinase
MLAPVQLTSATRQNLWRLTFIRTLVLAAQAGSVGLAYWLDLLPLPWVQLV
MTLGCSILLCVFTAVRLRTSWPVTELEYALQLACDLVIHSALLYFSGGST
NPFVSYYLVPLTIAAVTLPWRYSVVLSGIALALYTLMLTHFYPLETLPVA
RENLQIYGMWLSFALAAAVITFFAARMAEELRRQEELRAIRREEGLRDQQ
LLAVATQAAGAAHELGTPLATMSVLLNEMQQDHHDPMLQEDLKVLKDQVK
LCKETLQQLVRAAEANRRMAVEMQDVTEWLDEALNRWHLMRPEASYRFQR
LGQGPLPRVAPPPDLTQALLNLLNNAADACPENLQVTLDWTAEDLTISIR
DHGAGVPLAIAEQIGKPFFTTKGKGFGLGLFLSKASVTRAGGSVKLYSHE
EGGTLTELRLPHGARGEQHE
>Pfl_2210 Transcriptional Regulator, LuxR family
MNLTGSLRNMENPHFYWQLGELIASTGNERFATNMFQLVDNLVPVNRVHL
SEWTLDERESSVVEIKALGSAGLPDTFPPPDPLQHPDDHPLLQQMIEMND
SLLIQLKASLQHRHPHHSVHQCNLVSRTSNRRCVISFYRPHTHRVFSLPE
LSFLKRLSDTLLPLIERHAHISRQAIARQPRAPQADQPQTPLQQVFDERL
ALGDITLSVREKEVCLGLLTGGTVPQMAERLRVKNSSIETYLKRAAAKLG
VSGRHGLAKWMAGA
>Pfl_5044 phage shock protein A, PspA
MTQSIWSKLFTALRGGANEVGEAIADQQALRILDQEIRDADSALSNARRE
LVTIMAKHKLSADRVSEYEAKIGDLEAKAVSALNAGREDLALEVAEAIST
LTNDLGVEKKQTDEFGTYADNMRKDINKAEARIKSLRQQVDMAKARESVQ
KAQVSASIASGGANGKLETAVGTLNRLQAKQQQRAAELSAADELADASTG
NDLDRKLREAGITPNEGSANAILERLKQKSAQ
>Pfl_2703 Two component Transcriptional regulator, Winged helix family
MDCANVSRLLIVDDDGEILSLLKKFFVQHGYQVDVAAHGEAMWAAIAQAR
PDTIILDLMLPGEGGLSLCQKVRAQMGIPIIMLTAMAELSDRIVGLELGA
DDYLTKPFAPQELLARVRALQRRVGENAPSGAEPSRPVMAFAGWHLDITC
RELRSPEGVMIPMSAGEFDLLLVLLEHPQRILTREQLIDLTHGQGHDAYD
RSIDVQISRLRRKIEPDSKRPDLIRTVRNGGYMFTAKVSRS
>Pfl_5012 conserved hypothetical protein
MTRRWLAIVVLTLLGAVAQAQDAPPSVIHLASEDWEDYTAADGHGLGWDV
LRKVFEPAGVTLDIRTVPYTRSVGLVQLKEADALVGSYRGEAEQVLYPKW
NFDSDHIYALGLASNPSPTQATLGKYRLAWVRGYRYETYLPNVKRFNQIE
RRTGILSMLKQGRADYYIDALTEIEAVVRNAADPSQYRYSHLAELPLYLG
FADTPQGRALMSIYDQRMEQLVKSGELKPIFERWKQPYPFE
>Pfl_0222 Response regulator receiver domain protein (CheY)
MSLETFGQPLLTFPDAEKSPLSIRAKALVFVDPRSRQLREEMAQLAPRSI
SVLIRGETGTGKELLARHIHRASDRSGLFVSVNCGAISPTYADAELFGYA
AGSYSGSASSRAGWFGSANGGTLYLDEIGDLPLPIQIKLLSALENHEVTR
VGAHQPSPVDVRLVAATSIDLAQAVAAGKFHERLYHYLSEGHLELPALRA
RVGDILSLAEYFLGIYSQRLDLPVPLISEAAQQVLEQHSWPGNTRELENV
IHFALLVSTGDEILPEHLNLPEVSGPQVQIERQVASVSLNGTVDERKALK
EWLLSLSEAL
>Pfl_0611 Periplasmic Sensor Hybrid Histidine Kinase
MRWLRIAIGFTVTLLTLLCMLPAQAAQGSGWSVLLDDQGNLQLSDIRSAR
YTNQFSPIELDRLTAAEPDGALWLRFRLAPGKHEQVLRIFAPDLSHLNLY
VLDGDRLIEQRDTGTAQPQAERPLPSSDFMLPLPQSDKPLDVYLRLVSDH
QLRPYITLQAAVMAAANHNQTLIYGLLFGCLAMLILHNLIRYAYTRSRSS
LWLAVCEGLLSLSLLLLLNLAGPWLPNWHAIQTPGAYLALLLTAPAGLMF
AYRFFAPLGPHPLNKLLIGDILFIVICSLLLLFVNTLPLNIITYALVALA
GLSMLLVGFYHWQKGYRPARLFVAAMVVFNIGTLIILPALLGLTLVAPQG
LIMTLMGFICISGLLMSIALGERQRSITESRFSISRDLAASNAEINAKAE
FLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAGNELLTLI
NEILDISRLESGQIELDDVQFDLNALIDDCLSIYRAKAEQQNVELISFIQ
PQVPRVISGDPTRLRQTLLSLLENALKKTEEGEVLVVVALDERSAGPRLR
IAVQDSGQPMDQEERDALMHAELHSKHFLSANRLGGNLGLVIARQLIRLM
QGEFGIKSGASQGSTLWLTLPLDPDRLEHPTSDLDSPLQGARVLVVDDND
TCRKVLVQQCSAWGLNVSAVPSGKEALALLRTKAHLRDYFDVVLLDQNMP
GMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIIARNSGIKRILAKP
VAGYTLKTTLADELNQRNRGQVVFQPQVASPAAPVKVPSDFRILVAEDNT
ISTKVIRGMLGKLNLQPDTASNGEEALQAMKAQRYDLVLMDCEMPILDGF
SATQQLRAWEVGNQRIRTPIVALTAHILAEHKERARQAGMDGHMAKPVEL
SQLRELIEHWVAQRDQQNRATTQPS
>Pfl_0287 Two Component, Sigma-54 Specific, Transcriptional Regulator, Fis family
MTIDNRIQVVLIDDDPHLRQALGQTLDLAGLKILPLSEAKGLAAQLERDW
PGVVVSDIRMPGMDGLELLSELHAQDPELPVLLITGHGDVPLAVQAMRAG
AYDFLEKPFASDALLDSVRRALALRRLVLDNRSLRMALSDRNELSARLVG
QSAPMLRLREQIGALAATKADVLILGETGAGKEVVARALHDLSSRRNGPF
VAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFLDEIE
SMSMDVQVKLLRMLQERVVERLGGNQLIPLDIRVIAATKEDLRQAADQGR
FRADLYYRLNVAPLRIPPLRERGEDALMLFQHYADEASARHGLPAHELQP
AQRALLLRHSWPGNVRELQNAAERFALGLELALDNTQPDGSPGTSVEITA
GGLSEQVENFEKSLIAAELARSHGSVRSLAEALGIPRKTLHDKLRKHGLN
FAGSGGHSDESE
>Pfl_2004 Two Component, Sigma-54 Specific, Transcriptional Regulator, Fis family
MEHSILLVEDDELLAENIQTYLERKDFEVTVCHSAEDALGQLESFMPDIV
LTDNSLPGMSGHDLIQKLRISAPDLKVIMMTGYGNVEDAVVAMKEGAFHY
VTKPVALPELKLLLDKALATERMERTLSFYQEREAQKSGVQALIGESAPM
LHLKNTIGQLLDAERRMANGDLPPVLVEGETGTGKELVARALHFDGARSK
GPFIEFNCASIPANLVESELFGHEKGAFTDAKDRRVGLVEAADGGTLFLD
EIGEMDLVLQAKLLKLLEDRTIRRVGSVKERKVNLRVISATNCNLEQMVQ
QGKFRRDLFFRLRIISIKVPRLYARGEDILLLARHFLASHGKRYGKPNLH
FSDQAEELLLSYTWPGNVRELRNMLEQTVLLAPNDTIAAHQLNVCMSLCD
ELPPQHQHEVPHTHFEPRPASNTESMNLPEVERDMVRKMLDKTDWNVTKS
ARLLGLSRDMLRYRIEKLGLARPDKRQW
>Pfl_2564 Putative FecR
MTQNTLSEAEYDAITDAAAHWCMRLHAVDCTAEERQAFEQWRDAHPLHAF
EYEAMLEIWEVAEHLPRPEPAPVVPIRQPASSWRRYAVAASVCALALPLA
AWAGWNLGWLPNSYQHFAATDNVRHVTLGDGSQVELNLNTELTYSNYKDE
RRVTLKKGEAFFEVSHDLGHPFIVRAAEGRIRVTGTRFNVWMYEDQVKVN
LIEGSVLVTSNARLSGDGLRLGPSMQARYKHGDDMPQISQTYANDHSLAW
RSGRLVLDNLSLNEALPQINRYLDKPLMLADNSTGSIRIGGIYNIKELNS
FASTLPKVLPVFLTRNKDGNPIINPMPQQPPKN
>Pfl_0203 Heavy Metal Sensor Signal Transduction Histidine Kinases (STHK)
MRARSIAWRLALAFAAVCALVLSAIGVFLYRSLAAEIAWRDDMALLGRLE
QVRALLADSDSLDALQARPRLYQNMLGNLDSLLLVQRADGSNVITINPRQ
RALPSVQAIPRDQPPQRRDVLTWQAADGVELALLSGQAQGPNGEALTVIA
GKVLSEREQMLGSYRLRLYLAVGLGAVLAFTLGLVLLRRGLRPLRKLSEA
LRGIDLRSLDQRVPTAGTPAELLEPVHALNGMLGRLDDGFQRLSQFSADL
AHEIRTPLHTLLASNGQALNYPRSSAEYQEVLASNMEEFERLKRMAENLM
FLARAEQAERALDLRTLELHEIGDELCDYFEALADDREIRLENTFSGELL
ADQQLLQRALGNLLANAVRHADAGSVISLRRRDEPGLCWLQVHNLGPVIA
DEHLGKLFDRFYRVDPSRAEPGDSGGLGLAIVQSIMRLHGGQVRVSSDAT
GTVFELGFVTSR
>Pfl_3845 Protein tyrosine phosphatase
MFKKILVVCVGNICRSPTAELLLRNALTPSAISVTSAGLSARVGEGMEST
ARQVLEERGHSAEGFKARQLTADIVNESDLILVMEKQHVNQVLKIASHAR
GKVFLLGKWQSEREIQDPYRQGQAAFIHAHALIEDAVSSWAQRLAR
>Pfl_3134 Anti-Sigma-factor antagonist (STAS)
MERIPILQMGDFLLVTIQVDMHDQLALTLQDDLSERISKTSARGVLIDIS
ALDMVDSFIGRMIGTISGLSKIMDAETMLVGMQPAVAITLVELGLYLPGV
STALNVERGMKLLQERVRQQ
>Pfl_3197 Putative FecR
MNIFRLTPAEPTPAERLQSEARDWLILLTSGRATVADARALRQWCAQSPE
HARAFEECKALWHLLQPAAEAMQAPRRFGRRAFLGGAIAASAALLLVRGT
IPGGFSGLGADYITEVGQQRRVEPADGLSLELNTQTRINQRSVDEGVQGF
ELVSGEVEVQTARLPMAMQAGGGWLRASRARFNLRNLDQQVCVTCLDGAV
DVEVEGRSLRLEPGQQLTYDAQQVGTMQSVDTAAVMNWRQQVLVFNGATL
SQMIDEINRYRPGMLLLLNRELGQRRVQARFSLDQLAGVGALIRDAYGVK
CTELPGGVVVLS
>Pfl_5126 Two Component Transcriptional Regulator, LuxR family
MIRVLVAEDHTIVREGIKQLIGLAKDLQVVGEASNGEQLLETLRNVPCEV
VLLDISMPGVNGLEAIPRIRALNHPPAILVLSMHDEAQMAARALKIGAAG
YATKDSDPALLLTAIRKVAAGGRYIDPELADRMVFEVGLTDARPLHSLLS
EREFSVFERLAQGANVNDIAQQLALSSKTISTHKARLMQKLNITSLAELV
KYAMEHKLL
>Pfl_1573 conserved hypothetical protein
MILEVAVIVLFLFWAGTLAMFLAYIKAQRVIAAQQAQGDALRDQRIRDLA
KRVDDYQNGNVRMGEALHELRAVVSPIPDKLSQLEQRDPSSLSFAQAAKL
VGMGASVDELTQSCGLTQAEAELMRKLHKS
>Pfl_5693 Putative Adenylate/Guanylate Cyclase
MNKLFGTFDMDTSITKSVRVSDSKLQTRMAAESASFEPVEQVHDYNVQNN
IRQLYGKPGISNAVIGGHPDFDHLVESRTREKGFVTSLFVDIQGSTRLGV
YYSPEMVFYFKNQIIKCAIECVLAFDGHVHRIMGDAVLAFFRGKGSANNS
AIDAINCGAVLVQYIREEVVPKLRERGLAEDVGIRVGIDYGSHEQVLWGM
YGYAGVSEVTATSFHVDVAAKLQQSAPRNRVMLGQSIVELLDLHDEVIEV
KRAMSGGEKTNLPFVSPNYKDVNGRPMNYRQYVLSQDRYSALLPYPEDAD
DPIRITSTIKREAGIQSDDHYFKCSRSVPLRQGIEFKALFFPVTQAEKVE
VRFRVENNGKQAEAAVNNGNHDTKVPAKRRDNGQYFARHWERSSYLGLHY
MFISVYEDDVLTHREQRYSLFIG
>Pfl_1784 Response regulator receiver (CheY) and ANTAR domain protein
MLRILLINDTAKKVGRLKAALTEAGFEVIDESGLTIDLPARVETVRPDVI
LIDTESPSRDVMEQVVLVSRDQPRPIVMFTDEHDPGVMRQAIKSGVSAYI
VEGIHAQRLQPILDVAMARFESDQALRAQLQARDQQLAERKRIELAKGLL
MKMKDCNEEEAYTLMRRQAMSRQQKLIQVAEQIIAMSELLG
>Pfl_2970 chemotaxis sensory transducer
MRFARVSIKWKITLLAGFCLLCTVVLLVGTSLYRMDTSLALVKSANSQML
EAAARARMEARGEQQAETTQRFFSDISNYGNQFTRQVQQLRDQATKHGAD
PQELRKDLNQLVHDGLKANPSLLSLYVVFAPDALDGQDARFADESTSGSN
EKGRFASYWSQKDSTDSYMAVPEKIIADTTPMLDGTPFNTWYSCPQQTLR
PCVLNPYFDDTSGQPLLMTTLAFPLIENGKVIAVIGADISLSRLQQLSLD
GSLQLYEGRGTLRIVSSAGLVAGDSHNPGSLGRTLESVQKDGADLLAMLS
SGKSQSLDTLTSLRILEPLKVIPEGKPWGLVLEVPRAILLEPALALHQEL
DERSLSGALWETGLAGGVALLGLIVLWLTARGVSMPILSVANMLRDIASG
EGDLTKRLDYQGSDELGQLAGWFNRFLDKLHPIIRDVKASVHDARATADQ
SATLSEQTSTGMEHQFREIEQVATASQEMSATAHDVATSAAQAAQAARGA
EQASSDGLAVIQQTTHLIDGLAKDMSLAVREVEGLAASSSKIGSVLDVIR
AIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRGLAKRTQDSVEEVRQ
VIETLQRGTSEVVNAMNNSHHQAQGSAGQVVQAVTALQRISGAVSIINDM
NLQIASAAEEQSVVAEEVNRNVASIRDVTESLSDQSKKSAQISQSLNHLA
NHQQQLMAQFKV
>Pfl_0973 extracellular solute-binding protein, family 3
MKMLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFS
VPDSTGKIVGIDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEID
ILSRNTTMTSSRDAGMGLKFPGFITYYDGIGFLVNNKLGVKSAKELDGAT
ICIQAGTTTELNVSDYFRGNGLKYTPITFDTSDESAKSLESGRCDVLTSD
KSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEWLAIVRWVGYA
LLNTEEAGISSKNVEAEAKSTKNPDVARMLGADGEYGKDLKLPKDWVVQI
VKQVGNYGEIFEKNLGKSTPLEIDRGLNALWNNGGIQYAPPVR
>Pfl_3040 Histidine Kinase
MPHANALLEKLANSSQRLNKGLLILGALALLLLGISYLGVQRMVEEQRDT
LQFHFARLMENVREQEAFLGDISRAGASGEYLPVTVASPMVQKLLPEEGP
NIYQGRGLPFSLPFSVKIDPQRIAPDQYPKVFALGSYLAAYYSAFWAASH
YQSPQVILLNGPDNFDIAVPATGRLRGAGPTQVGRFVKLMTQMNMQRHSQ
TSEQVLWAPYPFEQDNDGTPSLLAYVRMNLSKPTLRIEGANTWVVLGSLL
KLSQVNNIERLMEWSIYDNFTLITPNGTVLIGALKPNQMLDDGANLTRDG
LVFKLTSAGDQRWTAIYVISVQSFLDYALWPLLCLLALVLALLGSGRALN
RWYTDRVILPAQSAHASIAESEAFCRAVIDTAPTGLCVISRRNHQVLLEN
QLAQQWHDSGELISLLDQQAATGHGHAELEIDSRHLHVAFVATRYQGQDA
WLCALHDVTRHVEDSAALEVARQAADSANQAKSRFLATISHEIRTPLYGV
LGTLELLGLTALAPRQQEYLETIQRSSASLFKLISDVLDVSKIEAGQMNL
ELQPFCPLELTEDVVRSYGAFARGKGLQLYACIDAALPDHLLGDAQRIRQ
ILNNLLSNAIKFTDNGRVVVRVRVLQNSGGQARVQWQVSDSGVGISQAQQ
QQLFDPFYQVNEADSHAGAGLGLAICKWLCELMHGQLNVVSEPGLGSCFN
LQLMLECASDSLADCPAFGADSPAVYVRAPVAELAQHLMAWLNRFGLDCR
LVTNELPPPSALLVDLAPLASATAFAGQRIVAIAAGPNPAQVSGNGWQVD
ADDVRAIGWAIALAVHGAGQQRPPSRQASTRALNLRVLVAEDNAINAAII
KEQLEALGCSVVVAADGEQALAHWAPGRFDLLLTDVNMPVMNGYQLAAAL
REQDPTLPIIGVTANALREEGERCAAVGMNAWMVKPLNLATLRAQLQSHC
QITIAPIADAPPTLSPKMRELFVVTLRRDIQSTLSALDAANADSVAQQLH
SMAGALGAVQVATLASAFVELECRLTGMAVTPALAVEVRQQLARLSDLLD
ALE
>Pfl_5488 Transcriptional Regulator, LytR/AlgR family
MNVLIVDDEPLARERLSRMVSELEGYTVLEPSATNGEEALALIDSHKPDI
VLLDIRMPGLDGLQVAARLCERETPPAVVFCAGPDEFAVEALQASAVGYV
VKPVRTEHLHDALKRAERPNRAQLSALTRPAAESGNGPRSHISARTRKGI
ELIPLDQVVYFIADHKYVTLRHEAGEVLLDEPLKALEDEFGERFVRIHRN
ALVARDRIERLQRTPLGHFQLFLKGLNGDALIVSRRHVAGVRKMMQGL
>Pfl_4307 Putative diguanylate cyclase (GGDEF domain)
MENQRGKGLSFARRIYLPRSIGLGIGFFSVGAALYPLNMPGWLWALLLFN
GFLWPHVAYQCSTRSAFPYRAERRNLLYDSVCGGFWTACFQFNPLTTVTI
LSMMTMNNVAAGGVRLFWLGALAQLIGVLLGWSVFGVHFTLTATQTQVWA
CLPMLTLYPLALGMVCYRLAIKLAEHKRTLSALSRTDSLTGLLNHGAWKD
LLHLKFQQCRQHNSQAILALIDIDHFKSINDSYGHIVGDAVLRQLSHELK
FVLDESKLAGRYGGDEFCVILPNLPLSKAEALMEQLRQALDRYRHPDVSE
LRVSLSIGLARYQTSYADALEWFEDSDKALYTAKHTGRNTISVALTRSPA
>Pfl_4481 conserved hypothetical protein
MSMRNDAHDDFDDVPSLRADTLDDDDFPATARTTVHSRTPPAVKVKAAST
GPLWALVGALFFAFIGLAWWSFQQISLMEQQLVATQESFARISEEAAGRL
QDISGKVVASQTNVTTDSEALKQQIKQLQSALQDQSKQQQGVAGQASDLD
KRLAQMTAQTTEQQTANTQLQAQVKALSTELATLKSTPADTSKVDAQLKS
LDAQVKGFDAQFKSLGADITALKKQGNPSAAIDRLEQEIVILKSEQDNRP
AAAQGGTNTAEFDAFRGQMTRNINTLQAQIQNLQQQLNARP
>Pfl_3138 Multi-sensor Hybrid Histidine Kinase
MKHDIRLLIVDDNVATRYALRRRLERHGYEVLEAGTGGEGLALIASQSLD
ALILDVNLPDMSGFDIVRKLRADPGTALLPVIHVSAASIQTGDIITGLDA
GADAYLIHPVDPDVLLATLRTLLRVRDTENALRESEARFREIFVNVSAPI
AVLDADLKVHECNHAFSQLIQDNRDPQTLSECFAEDQSAILDELRLRLVD
GERWKGTLNMRVQGEVRETEWQISPYRTPKLSLVFVEDVTEHRHRERSHL
AQLDDTTTQLAKEVADRVRAESQLLQVQKMDALGKLTGGIAHDFNNLLTG
IITSLELIQKRVADGRTDKVQFYAEAALNSARSAASLTHRLLAFARQQPL
DTRPVDINRHVRSLEELLVRTIGERIALKLELTTKPAIALVDPIQLESAV
LNLVINARDALPRGGNIWVSTYAAYSHGDPNLADGSYVALSVRDDGTGIE
HNVIDKVFEPFFTTKPLGQGTGLGLSTIYGFARQSGGDAHIRSVARRGTE
VTIMLPATSDPTAVDVAPVTIDPQGSGEHVLIVEDMPAVRLFVTEVLEDA
GYRCTQAGDIETALERLQNDASIDLLLTDVGLPRMTGRELADVARGWREG
LPILFMTGYAETAINRQVFLGAGMDMLVKPFQISALLDKVRRTLDGA
>Pfl_5289 extracellular solute-binding protein, family 3
MQKITLLGCTLALVFGAQAQASEVPLTGTLGKVASANSITLGYRDASVPF
SYVGDHTGQPMGYSVELADKIVERIKQQLALPELKVKYNLVTSQTRIPLV
QNGTVDLECGSTGVTAERQKQVAFSYGFIYVKGQLLTARDSGIQSFDDLR
GKNVVTTAGTTNERYLKSYNLDHKLNMFVISAKDHGEAFQMLQSGRAAAF
YMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRKDDPQFLALVNGV
LADLYSSGEINGIYRKWFEQPIPPKGLNLEFPMTRELKAIIARPTSDPVQ
>Pfl_5111 Transcriptional Regulator, Crp/Fnr family
MVGITPTPKIKNLDKLLMHCQRRRHAAKSNIICAGDRSDTLYFIIRGSVT
ILIEDDDGREMIIAYLNAGDFFGELGLFEEAGQEQQRSAWVRAKVECEVA
EISYAKFRELSQQDPDILYVLSGQIAQRLRNTTRKVGDLAFFDVTGRVAR
CLLELCKQPDAMTHPDGMQIKVTRQEIGRIVGCSREMVGRVLKDLEERNL
VDVKGKTMVVFGTR
>Pfl_4944 Periplasmic Sensor Hybrid Histidine Kinase
MRYLLMLLFCLPLLASAVEFDEFTQSLPLGRSLQVFEDPSGQASIADVRA
QAAAGNFKPHDKATLNAGYSRSAFWLKIDLHYRPTNPSAQRSWLLELAYP
PLDHLDLYLPDAAGDYRLVRQTGDALPFASREIRQNNYLFDLAFKPDQQR
TVYLRLSSEGSIQAPMTLWSSTAYLEDQPVRLYVLGVIYGVLLGMLVYNL
FIYLSVRDTSYLYYIFYIASFGLYQLSVNGAAVEYFWPDNPWWANAATPF
FIGCAGLFGSQFARSFLQTRNHSRWLDRLLIALIAFGAMVIGLSLMTSYG
LALRLATTLALTFTVVIFAAGILAWWRGLRVARYFIIAWSAFLIGGIVNT
MMVLGLLPNVFLTMYASQIGSAIEVALLSLALADRINAMREQQAQTLFDA
GQKLEVLNQQLAHSNKLKDEFLATLTHELRTPMNGVIGSLELMQTVELDP
ELEQYQQTAAGSARDMMRMVNGILTLTELQAGKLKATPGSFSLRGVVEAL
RMQFDGNASSKSLDFKVDVLPTLPDRLHGDSAKLAQCLECLLDNAIKFTR
VGGLALRVTGKPSTDNRLALSFAVIDTGIGFTDLGEATLYQRFFQLDGSM
TREYGGLGVGLAICRQLVELLGGKLTHRSEPGSGSRFQLDVEFELPEVEA
VPAFSRDTVRAPQDCTVLLVDDNSVNQLVMRGMLLKLGFRVRTADHGAAA
LDCLQRERFDAVLIDCQLPPLDGASLCCQIRDLPGCAHLPVFMIALGADR
EHCASGGSIDYLSKPVKFEDLQVAMQRRVLSC
>Pfl_3390 Periplasmic Sensor Signal Transduction Histidine Kinase
MLRLFLGLFLVMTVGLVAALQTVEHTFNALLDNQMQAYNREAVRGQAWSL
IEHMRDQQGAAREAQLEALRPHYGLTLSLVEADQLNLNDQEKAELAQDLL
VIRDDYTQFISNIDGGSQLLSIKLPPEPSLMPFYIAGAYLMLAVLLGIVL
YFWVRPHWRDLEKLRLAAERFGDNDLSVRIQLSKRSNIRDLAGHFNLMAA
RIEGLIANQRELTNAVSHELRTPIARLSFELDQLKQQPDASQNRELIADM
YADLGELEEMVSELLTYASLERGATVITRENIQAANWLDSVVGSVALEAE
AAGVQLLIVDCRVDEVRIEPRFMARAVINLLRNAIRYAEQRVEVSLVRVG
DQYEVQVNDDGPGVPLAGREKIFEPFSRLDASRDRRTGGFGLGLALVRRV
SQSHGGQVEVGDSPWGGASFRMTWAHLD
>Pfl_3012 conserved hypothetical protein
MAEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAY
ALFGLIRLRQAWEVLRYRRNIRRLPRYGLTSRQIPVSRKRLFMGRGFRWT
RLHTQRLVEAQDPAVAHYVEQPTRYRLARGLERRLEHAPFPFSTLARATA
WDSAFNPLRPLPQVGGSPLLHGVEPDETEVSLPLGERVGHTLVLGTTRVG
KTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEAKRAGRDKEFY
VFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFV
NIIARALIELGRRPDYLQIQRHVVNIDALFIEYAQQFFAKTDPKAWEVIV
QLEGKLTEKNIPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDR
TYFDKIVASLLPLLEKLTTGKTAQLLAPNYTDLDDPRPIFDWMQIIRKRG
IVYVGLDALTDAEVAAAVGNSMFADLVSVAGHIYKHGIDHGLPPSGNSSD
KLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGNR
AKAGQVIGNFNTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSD
PEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQAGGQLWKVRM
PLPKPSNDDAMPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQV
G
>Pfl_1864 Hpt Sensor Hybrid Histidine Kinase
MIWPLRFVLLSILMLASTVHATEAQRLEIVSRTRLEGVQIQLDEQDRQWL
RAHPVLRIGASWPDYPPFELTRKRHELEGLTADYADAIAQILNIDVEVWC
HANRASAMAALKAGEVDLLGTSNNFEIADPELMLSRAYAEDQPMWVTRLN
EALPDDLAGKRIAMVDDYLPASTIEEAYPKASLQRYRSILDALGAVAFGR
DDLYLGDFISASYLINTHFQNDLQLAGPSGLDANPFGFALARSNIRLKRL
VDKALLAIPMEQRLAMELRWSAGRADIAAQSRVSLSDSEQQWLDQHPVVR
VGAVDDFAPLTFFDTDGRFSGLVAQLLNLISQRSGLTFEVVRGQSLDRQV
EQLRNGELDLLPVMTPSRERETQMLFTRSYANSPFVLITESKAQAPRSLE
EMAGKRLALYRGNPLRDYLLEHVPQINLIELPSPADGTRALFDGRADATL
SSLLVARYQIDHQYRERLRIASTLGDQPARIAMATAPDAPQLQSILNKAL
LGIAPQEIDGLVARWSRNVVLQDSYWQRHREQILRGFAVAAGLLLLALGW
IAFQRRQIRQRQQWLQQLQEAKDAADEANRAKSTFLATMSHEIRTPMNAL
IGMLELALKRADEGVTDRQAIEVASSAGQQLLALIGDILDIARIESGHLS
LAPKRANLREVVASVCRIFEGLARQKQLLLHVELDERSDVEVMLDPLRFK
QVVSNLLSNAIKFTEAGEVSLCLRVFGEHGGLIEVGVAIEDSGRGISAED
QQRLFSPFVQVGDHRSVAHGGSGLGLVISRNLCRLMGGDLWMNSELNRGT
QVMLRLELPVLAPRVQKEEAAPAVAMTNSLAVLVVDDHPVNRLLLCRQLS
ELGHRPVDTDGGERALALWRGQSFDALITDINMQGLNGYELTRAVRQEEA
ATGRAPCLILGFTANAQIEERQRCRAAGMNDCLFKPVLLRELSQALMAAG
AETQVESLDESAVSEFDLSALLQLAGADNPLIEQLREEVRNSLRIDLQRL
EASGLDRDVLRDLAHHVTGGAHMIGAERVVSACRVLEQACRDDQPAAALT
AAIDSLRVAMHDLAQQLQA
>Pfl_1565 Chemotaxis phosphatase, CheZ
MEHNESSQGDFESTLKKHAVELVESLEKGKFGDAVQLIHELNQTRDRGLY
QEVGKLTRELHSAIVNFQIDPHMPQAEEVSQITDATERLGYVVKLTEAAA
NRTMDLVESATPVVNGLADEAQALSADWGRFMRREVGAEEFRELARRVDG
FLARSSADNRAVSSNLNDILLAQDYQDLTGQVIKRVTQLVTEVESNLLKL
VLMASQVDRFAGIEHDRAAMLAEKDPQKHLSQGEGPQIHADKREDVVSGQ
DDVDDLLSSLGF
>Pfl_3038 Periplasmic Sensor Hybrid Histidine Kinase
MRLKNYLHQISPVLSTPHAARRLLRIFALVLLAGILGGVYSFLLFTFNNE
ISQRRSYMSSAIAEAHTFFTGREALLESLSLSATRQTALSAPLSEEEIRL
LLGHPPGKQWSIWLTQRMRDFLQARKLNLLYVSSGADAQVWRLYNTTPMA
DDFPHEMLDRLETLKCDNNGALKEIWLTHNWQGHSQLYIFIRLDERDLDS
GWLGLEMDDREVSNALSDHSAGEFTMFNSQGMPLFSNSHKPPPGQNLPLL
RQQDFFGFVGDGWLPEQLVLRKQLKSSDRQLTYSIDLLAVLWALWPQLLG
ALAFCLASISLVWLLIRRLEHRFITPTLQRIQALVESELFSRDVIQTAPV
ALCVLRRSDARVVLENTLARHWLGECGQQLGPGWIRAAFADKSPCLTDYF
ETADGRHLYLSCAPTRYKGEDVLLCAFSDISARRQIEAALERARQSADAA
NEAKTLFLATMSHEIRTPLYGVLGTLELLARTQLDTQQKSYLRAIEGSSA
TLLQLICDVLDVSKIEAGQLALELSDFSIVALAQEVVQGYAAAAQSKGLQ
LYACFDPQLPDSLIGDISRVRQILNNLLSNAVKFTDSGRVVLRVNVLSRE
GERVCVQWQVSDTGRGIAHDDQAFIFEPFYQTRGNSHVIAGTGLGLPICL
RLTNLMNGTLRMVSEPGLGSSFSLTLPLEQRSGNTPPDIQPKLAGDIIYV
VSPVRELADSLAGWLRRWGARPQVGAPASQVPADGGVLLELYPTPMDQRS
ELRWSGPRVLASGAGACEPQCTVDGWIANLNDLAAIRQALRQAQGGAVIE
HQQTQTQALAPLHLHILVAEDNAINQLILRDQLQELGCTVALASDGEEAL
SLWQANTFDVVLSDVNMPRLNGYELAKTLRRLGCTTPIIGATANALRGEE
ALCLAAGMNHCLIKPFTLRALSIVLAPYQRVAHEVP
>Pfl_0339 Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family
MSRSETVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPD
VIISDIRMPGASGLDLLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAF
EYLPKPFDVDEAVSLVKRANQHAQEQQGLEVAPALTRTPEIIGEAPAMQE
VFRAIGRLSHSNITVLINGESGTGKELVAHALHRHSPRAASPFIALNMAA
IPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGDMPADTQ
TRLLRVLADGEFYRVGGHVPVKVDVRIIAATHQNLETLVHAGKFREDLFH
RLNVIRIHIPRLSDRREDIPTLAKHFLSRAAQELAVEPKLLKSETEEYLK
NLPWPGNVRQLENTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWE
QALRQWADQALARGQSSLLDSAVPAFERIMIETALKHTAGRRRDAAVLLG
WGRNTLTRKIKELGMKVDGGDDDEGDEG
>Pfl_4804 Transcriptional regulators, TraR/DksA family
MPTQAKQQASQTLSGFEPYVPKAGEEYMGAPMRAHFTKILTKWKLDLMQE
VDRTVDHMKDEAANFPDPADRASQEEEFALELRARDRERKLIKKIDKTLQ
LIEDEEYGWCDSCGIEIGVKRLEARPTADMCVDCKNLAEIKEKQVGK
>Pfl_0728 chemotaxis sensory transducer
MNSWFGNISVNLKLGLGFGLVLALTCILALTGWTSLGGLIDRSNWMSDIT
QLNAGLTKLRVVRLQYMLTNGDETAAQNVQTTLDGFAAQQQKLISSFKSP
ENVKLLKEQAATIAEYQTSLNKMRNAYRTGNTARDSMATSAATAYGLIEA
LSNRVQQMPLSDERFEQFQAVTAAKEAFILARYEVRGYTATANAETEQKA
VGQLDVAIASLKPLNTHFASTQQDALRQLETALTNYRSALQAFKNANTDA
VQARKEMTDQGATIVTLSEQLYQIQLDRRDAESAQARTLQLISTLLALLV
GIIAAFIITRQITRPLQETMAVVDRIASGDLSHNVIVTRRDELGVLQQGI
ARMGVTLRDLISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVA
TAMHEMTATVQEVARNAEEASQAAAAADGEAREGDKVVNEAIAQIERLAS
EVVRSTEAMSVLQQESDKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEA
GRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQNGTQQVAAVMNNSRALT
DSSVALTRKAGDSLENITRTVSNIQSMNQQIAAAAEQQSAVAEEISRSII
NVRDVSEQTAAASDETAKSSVELARLGGQLQQMVSHFRV
>Pfl_5255 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation
MECAQPQPGEGSSVLLIVDDYPENLISMRALLQRQDWQVITAASGFEALS
LLLEHDVDLVLLDVQMPGMDGFEVARLMRGSQRTRLTPIIFLTANEQSQD
AVIKGYASGAVDYLFKPFDPQILKPKVQALLEHQRNRRALQRLSQDLESA
RAFNASVLDNAAEGILVLGEDGLIRFANPAISRLLNAPVKELEGQEFLDF
LQKPHIPLWADSEFYASYKRGETLRLHDALLRTAPGQQVPVALSCAPLPS
EQHAMVVTVLDMSVVRHLHQQLEFQAVTDPLTGLLNRRGFYQTVENLLLR
GERTDSSWVLMYLDLDGFKRVNDSLGHDAGDRVLRWVSEQLKACLRPFDI
LARMGGDEFTALLDLEFPEQAAKIAEKLIERVSICQQIEGLDIALGASIG
IATYPDCGNNLDGLLRASDIAMYEAKRAGRQQYRFYDHEMNGRARSRLML
EESVRNAIENRDFNLVYQPQVAIGDGRIRGFEALLRWQHPSVGDVPPGLF
LPLLEEATLISRLGSWIYHRSAGQRKAWESEFSQDLVIGVSLSNTQFGLP
NLVTELRQVLERHGLQPHQMEVEVTEEALTINPDETRKQLKLLRNLGVRV
ALDDFGSGSCSLAHLRDLELDTLKLDRHLIARLPDSSRDASLVRTVIDLC
KEYGLLVIAEGVETVEQYQWLQAHGCEYVQGFLVARPLVAEDTARFTEPF
DWSALAG
>Pfl_0692 Putative diguanylate cyclase (GGDEF domain)
MRRDKSTGRPTLGSVIGRGNLIVALVAVAMASVSLTLLGVLALRVYADHN
LHLIARSISYTVEAAVVFNDKAAATEALALIASTEEVADAQVLDTQGQLL
ARWQRPENGLFSELEMQVARVILEKPINLPILHQDREIGRILLIGHGGSL
MRFLLSGLAGIILCTAISAWVALYLAQRQLRRIIGPLHSLAAVAHAARSE
RALDRRVPRAKIAELDNLGNDFNALLDELEDWQTHLQSENETLAHQASHD
SLTGLPNRAFFEGRLIRALRSAHKLNERVAVLFLDSDRFKDINDNFGHAA
GDAVLVAVANRVRAQLREEDLVARLGGDEFAVLLTPLHKTEDAERIADKI
LASMDTPIALPGDSSVVTSLSIGIAVYPDHGVTPGTLLDAADAAMYQAKR
LSRGAQSTAGSEHPVDPVQTRS
>Pfl_2250 Response regulator receiver domain protein (CheY)
MGTPLLVSVVDDDESVRESLPDLIKEFGFAVQAFASAQAFLASPYLDLTH
CLILDVAMPGMSGPDLQRELLRRGYRIPVIFITAHSDASEQAKLLNSGAV
ECLFKPFSEAQLLKALSAALPLD
>Pfl_5304 CheA Signal Transduction Histidine Kinases (STHK)
MGDRHDYVALEWVKGEIAETLRQAHQAIEAVLDDPQSVPGLGECLACIHQ
VHGSLQMVEFYGAALLAEEMEHLVEALQNDRVSHRDEALHLLLQALGQLP
IYLDRVQGARRDLPLVVLPLINDLRSARGESRLSETSLFSPQLPELAPLG
EETLALLEPAELPNVLRKLRQMLQMALVGLLREQDDQTHLAYLAKVFTRL
EAISGNSPLSPLWQVASALVEGMREGRIANSPALRSLFKDADKELKRLLE
QGMPGLNQPPPPELLKSLLFYIAKAEHPTGQMLTMKDRYSLDDALPDSAM
VDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHASDLDS
LLAPLRQIADTLAVLGFGQPRKVIIDQLAVVLSLAQGQREPNDATLMDVA
GALLYVEATLAGMVGTVEPESPEDSRLPTTDLTQIHQIVIKEARICLQQA
KDMIVDYIDADWDRQQLQSLPALLTQVRGALAMIPLARAASLLEACNGFI
REHLLLDPHEPGWQQLDSLADAITSLEYYLERLSGDPQAPSEHLLDIAQK
SLASLGFFPDEEPGEPHVPVLDDVLSPSEALVMQDLQELDDPQIVQSLAE
VLASPVSAVNPPAQTTPGSLLPPPADEEPVDDELREVFLEETGEVLEVLS
EYLPRWSAEPDDRAALSELRRAFHTLKGSGRMVRALVLGELAWAVENLLN
RVLENSVEPGPAVRQLLADTLLLLPDLIAEFATNGQRQRHDVDQLAARAH
ALAKGDTPLPAEDVEDVAALDPLLLEIFRNEAETHLASLNRFLDQAAEHV
PLQASDELQRALHTLKGSASMAGVSPIAELAAPLDKLAREFKAHQLALDL
DEVELLLEAEGLFRVGLRQLKHDPLAPIVGAQSLIKRTETLLGERLESIL
NAPSSAVRVKRDPQLINNFLAQGMDILLDAENLLQRWQQHPGERQELSAL
LDELTTLGEAAHLADLLPVDVLCEALLDLYGAVEESSLAVSERFFHEAQQ
AHEALINMLDELAAGQEITPQPQRIRALHELLDESLDPSSMGLIRSDGSR
TLSIRELGSATAELQQHSADSGPDDEIVEIFLEEAVDILDSAGQALQRWL
KDPENGAPLSSLQRDLHTLKGGARMAEVTAVGDLAHELEGLYEGLVDRRY
SHSEALDRLLRQSHERLAQFLEQLHRHQPLDPAQDLIEAIRRFRQGPSAS
PETPTASVTQDGPGHDPELLEIFLEEGFDIIENSGAALLRWQAEPGNRQE
VETLLRDLHTLKGGARMVEIGPIGDLAHELEYLYESLSAGTLQGSAELFA
LLQRGQDRLAQMLDAVRAGQPCPPADRLISAIQNFSHPLVVQTPAPVPSV
AVKVEPAAPAPEAGADMVKVSAELLDDLVNLAGETSIFRGRIEQQVSDAQ
TALHEMETTIERMRDQLRRLDTETQGRILSRQQVDAERLGYEDFDPLEMD
RHSQLQQLSRALFESASDLLDLKETLDRRTHDAENLLQQQGRINTELQEG
LMRTRMVPFERMLPRLKRIVRQVAEELGKDVAFSVGNAEGEMDRNVLERM
AAPLEHMLRNAVDHGLESAEVRLAAGKPAQGQISLDLSREGGDIVFDIRD
DGAGVPLDAVRHKAIKRGLLAPDAEISDREVLQFILQPGFSTAEKITQIS
GRGVGMDVVHEEVRQLGGTMSIDSVPGQGVHFRIRLPFTVSVNRALMVQC
GEDQYAIPLNTIDGIVRVLPNELDGHFRLDPPSYQYGGQRYELCYLGELL
KTAPRPKLSGQSLPVPVLLVQCNDRHIAVQVDTMAGTREIVVKSLGPQFA
SVQGVSGATILGDGRVVLILDLLAPIRAMQARLPQRPTSHEIESEPQKPL
LVMVVDDSVTVRKVTSRLLERHGMNVLTAKDGVDAMLLLEEHMPDLMLLD
IEMPRMDGFEVATQVRHDERLQHLPIIMITSRTGQKHRDRAMAIGVNDYL
GKPYQESVLLESIALWSKKHA
>Pfl_4758 chemotaxis sensory transducer
MQAFLSPGIRLLGRFGFARKFQLLFLLFILPLAGSLLMIGQDYRDKLNLI
AGERAGVRQLLALDALDNLLAAQRDRAARWRATETNRQPTPATLAAVAAF
DGVQPAVAQATLELGNALQAEGAESETLTRYQALQAALNGLDSKSLSGVG
WWPDGYDRFTNALSALQALREQIAMDNRLILAPWLETYLLTQISTQHAPD
LIERVGRLAAVGQASVVSGQFTLQSRLQLRDLRSRIGDAREQLVKTASLL
EARLPPALQGWAGQYHDSLKQLDAGLKVLDDGVFGGSINLKPEEFERSLD
ALLGNLATLRQQSLVSLDQRLDDYHGSAIRQFIVVAAVFGFLLLAALYLF
VCLQASIRRSASGITLLAEALRDGNLSLQVPVVGRDELASISTALNVAVV
QLRTSLLGVDHETSQLSNAVRSLNDHSSGALSEVEAQQLQISQIAAAATQ
LAATSQGVAQSCEQASGSAQHTRRIAADSSRDSQRTTASIQQLNQRLNET
AAALGRVSEQGQQIQLVVDTIRGVAEQTNLLALNAAIEAARAGEQGRGFA
VVADEVRSLSQRTQSSTAQIAGTVDSLRNTVNEAVSLMEAACGQAQSDAE
AVTGLGERLGEIASAVQSVTDTLAQIATAVEEQASTADEVSGNIQQVDQA
AVRLLEGARAVNLAADTLSQGSHALSANTGRFQLR
>Pfl_2649 Response Regulator Receiver Signal Transduction Histidine Kinase
MLSNIQAKLLIVDDLPENLLALEALIKREDRTVYKALSADEALSLLLQHE
FAMAILDVQMPGMNGFELAELMRGTEKTKNIPIIFVSAAGRELNYAFKGY
ESGAVDFLHKPLDIHAVKSKVNVFVDLYRQSKAMKQQVEALEQSRREQEA
LLLQLQSTQGELEQAVRMRDDFMSIVAHEVRTPLNGLILETQLRKMHLAR
DNAAAFTLDKMHAMVDRDERQIKSLIRLIEDMLDVSRIRTGKLSIRPSRF
DLAQLVGSLLENFAQQIEAAETEVSFTAAEPVEGQWDEFRIEQVVSNLLT
NALRYGGKSPIQVRVYREGNEARVEVQDQGIGISEENQKRIFQQFERVSA
KTVVAGLGLGLFISEQIVAAHGGSIVVESKINEGALFRVCLPLQENGKTN
ATSE
>Pfl_4104 Carbon storage regulator, CsrA
MLVLSRVVGELISIGDNITLRVLAVNGSSVRFGVEAPEQVGVHRAEVYER
IQRKQASGKGR
>Pfl_5305 chemotaxis sensory transducer
MIKAKTGKPAEGSRSRSQIIVLFIALIVFIMLLFANFAYLNTQANYDKQY
IGHAGELRVLSQRIAKNATEAAAGKAAAFKLLSDARNDFAQRWGYLKKGD
PATGLPPAPSVVRPEMRAVQLDWERLLKNTDAILSSEQTVLSLHQVAATL
AETVPQLQIEYEKVVEILLQRGAPAAQVAMAQRQSLLAERILGAVNTVLS
GDENSQQAADAFGRDAARFGQVLNGMLQGNPALKVSQVEDRDARARLSEI
SELFQFVSGSVDEILETSPELFKVRESATNIFSLSQTLLDEASHLASRFE
NLAGGRSTDTIGGYVLGLLALASIILIGMVMVRETNRQLRETAEKNERNQ
NAIMRLLDEIEDLADGDLTVTASVTEDFTGTIADSINYSVDQLRDLVATI
NLTAGQVAAAVQETQATAMHLAQASEHQAQQISEASTAISDMAQSIDQVS
ANAAESSAVAERSVEIANKGNEVVHNTIHGMDNIREQIQDTAKRIKRLGE
SSQEIGDIVSLIDDIADQTNILALNAAIQASMAGDAGRGFAVVADEVQRL
AERSSAATRQIETLVRAIQTDTNEAVISMEQTTTEVVRGARLAQDAGVAL
EEIEGVSKTLAALIQSISNAAQQQTSSAGQISLTMNVIQQITSQTSSGST
ATAESIGNLAKMASQLRRSVSGFTLPTTPAPVADKA
>Pfl_1419 Isocitrate dehydrogenase kinasephosphatase
MPQQWPATDIARLILDGFDDYREHFRRITDGARERFEQARWQDTQTASAA
RINLYEEKVGETVARLREYFEPDTLMDVTCWPLVKSAYISIIDLRFDDEL
SETWYNSIFCSLFSHDLISDGCMFIHTTRPSLRRARAAQTRTYKPQGQIS
GMLASIFADYRFSEAYADLPGDLLRLEAQLRENLPDWVCKDPELSVELFS
SVLYRNKGAYLVGRIYTNDDQWPLVIPLLHREGRGIQIDALITDEAEVSI
IFSFTRSYFMVDVPVPAEFIGFLKRILPGKHIAELYTSIGFYKHGKSEFY
RALINHLANTDDQFIMAPGVRGMVMSVFTLPGFNTVFKIIKDRFSPSKNV
DRATVIEKYRLVKSVDRVGRMADTQEFADFRFPLSKFEPACLAELLEVAP
STVSLEGETVLIRHCWTERRMTPLNLYLDNANEAQVREALEDYGLAIKQL
AAANIFPGDMLLKNFGVTRHGRVVFYDYDEICFLTEANFRHIPAPRTPED
EMASEPWYSIGPLDVFPEEFPPFLFADAAQRKLFDQLHGELYNADYWKGL
QEAIRAGKVIDVFPYRRKGLDNE
>Pfl_4244 Periplasmic Sensor Signal Transduction Histidine Kinase
MNSIFLRIYGGMCAALILVAVLGVLALHLLNQVRSEQYRERLAHGTFSLM
ADNLQPMNETERHRALLVWERLLGIPLALKTFTQTDLDLTQRTRVQRGQA
LVEQTGPHAAKVYRLVSDKDQLVLVGEVQQISEQLARATIYLLADELVRV
PVGEQPKRLAQLKEDKGFGFDLRLVTVSDADMDEDQSRRVSEGDTVMALG
KGGDSIRVFAGMVGTPWVLEIGPLYQMNPYPPEWLVLIAALGLTLIGLIV
YLLVRQLERRLRGLEAAATRIAKGSLETRVPARGADSVGKLAAAFNGMAE
HLQQLLAIQRELVRAVSHELRTPVARLRFGLEMIGSATTPQALEKYREGM
DHDIEDLDKLVDEMLTYARLEQGSPALTFQRIDLDALVNQVIEELAPLRA
EVTVQRGLCLSAADCDDAWVEAEPRYLHRALQNLVSNAMRHARSKVTVSY
QVGQMRCRVDVEDDGPGVPETAWEKIFTPFLRLDDSRTRASGGHGLGLSI
VRRIIHWHDGRALIGKSKSLGGACFSLSWPRNQERR
>Pfl_3519 Two component Transcriptional regulator, Winged helix family
MTRILTIEDDAVTAREIVAELSSHGLDVDWVDNGREGLDRAVSGNYDLIT
LDRMLPELDGLAIVTTLRTMGVATPILMISALSDVDERVRGLRAGGDDYL
TKPFATDEMAARVEVLLRRQNSNGAQPTTLQVADLQLDLISHEARRAEQV
LTLLPTEYKLLEFLMRNSGQILSRMMIFEEVWGYHFDPGTNLIDVHIGRL
RKKIDPPGNVPLIRTVRGSGYVIAEPV
>Pfl_2592 Sigma-54 Specific Transcriptional Regulator, Fis family
MSEAPALRRLLVVDPCDDCHRLLPGLRAVGWDVDSCSLENAADRSCDVGL
LRLQPFHLERPEAVKELISRSGTEWIAVLNQEVLRLQNVGDFVCEWFFDF
HTLPFDVSRVQVTLGRAFGMARLRGQGTIHVDQQEHELLGDSKPIRELRK
LLSKLAPTESPVLIRGESGTGKELVARTLHRQSQRHSKPFVAINCGAIPE
HLIQSELFGHEKGAFTGAHQRKVGRIEAANGGTLFLDEIGDLPLELQANL
LRFLQEKHIERVGGSQPIPVDVRVLAATHVDLEAAIAKKRFREDLYYRLN
VLQVVTAPLRERHGDLSMLANHFSHFYSHETGRRPRSFSEDALIAMGKHD
WPGNVRELANRVRRGLVLAEGRQIEARDLGLISQQSIAAPMGTLEDYKTR
AERQALCDVLNRHSDNLSVAAKVLGVSRPTFYRLLHKHQIR
>Pfl_4222 Multi-sensor Hybrid Histidine Kinase
MQEKGVLKKLGIKGRVLLLTLLPTSLMALVLGGYFTWTQQSDLQTQLMQR
GEMIAEQLAPLVAPAMGHGDAELLERIATQSLEQPDVRAVTFLAPDRSPL
AHAGPTMLNQAPSGDSAHLLRRSGNDATRYLLPVFGKHRNLAGELIPQES
DRLLGWVELELSHNGMLLRGYRSLFASLLLIGAGLAGAALLALRMGRTIN
RPLSQIKQAVAQLKDGHLETRLPPLGSQELDELASGINRMAGTLQNAREE
LQHSVDQATEDVRQNLETIEIQNIELDLARKEALEASRIKSEFLANMSHE
IRTPLNGILGFTHLLQKSELTPRQLDYLGTIEKSADSLLGIINEILDFSK
IEAGKLVLDHIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLSLV
GDPLRLKQILTNLVSNAIKFTREGTIVARAMLEEENDDSVQLRISIQDTG
IGLSNQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVD
STPGEGSEFWISLNLPKTRDDAEDLPAAPLLGRRVAVLENHELARQALQH
QLEDCGLDVTPFNTLESLTNGVTGAHQTDQAIDLAVLGITSNDMPPERLN
QHIWDLEHLGCRVLVLCPTTELTLYHLSVPNPHSQLQSKPACTRKLRRAL
SDMVNPRQSRSEPGEPLSSRAPKVLCVDDNPANLLLVQTLLEDMGAKVLA
VESGYAAVKAVQSESFDLVLMDVQMPGMDGRQSTETIRQWESERHCTPLP
IVALTAHAMANEKRALLQSGMDDYLTKPISERQLAQVVLKWTGLALRNQA
PDRGGESLLGNQELPILDHEEGLRLAAGKADLAADMLAMLLASLEADREA
IRTARDHQDQNALLERVHRLHGATRYCGVPQLRAACQRSETLLKQDDPKA
SAALDELERAINRLAAQAKISA
>Pfl_0896 Possible Sensor with PAS/PAC domain
MINASLMQMVINASNDGIVVAEREGKDDNILIYVNPAFERLTGYTSEEIL
YQDCRFLQSGDRDQENLALIRDALRNNGSCREILRNYRKDGTPFWNELSL
STVKNVDDGQTYFVGVQKDVTVQVKAQQRVAQLEAQVAALEAELAALKAT
NGANKTAN
>Pfl_3327 Transcriptional regulators, TraR/DksA family
MTKDKLLAMPADDYMNAEQQAFFQELLQNMKVETHERIEQNRIAIESLDT
PADPADAASVEEERTWLVNAIDRDQRMLPQLEQALERIKEDSFGWCDDSG
EPIGLKRLLISPTTKYCIEAQERHEQIDKHQRQA
>Pfl_1482 conserved hypothetical protein
MRKTLIALMFAAALPTVAMAMPQDGGPMGGPLDGPRHGGQMHGMHGKGPY
SQLDLSREQREQIRKIMGEQMHERKQTVEKYLEKLSPADQKAMKDEMAAN
HKKAESDVRAVLKPDQQKKFDEIQKKQAERRAEWAEFKAWKAQQPQKAQ
>Pfl_1182 Two Component Transcriptional Regulator, LuxR family
MATYDILIADDHPLFRSALHQAVTMGLGPDVRMVEVASIAELETRLTEKA
DWDLVLLDLNMPGAFGFSGLVMLRGQYPQIPVVMVSAQEEASVMVKSREF
GASGFIPKSSDLSVIQEAVRKVLDGDVFWPPQAFEAVSVSDEAKAASDGL
ASLTPQQFRVLTMVCEGLLNKQIAYELSVSEATIKAHVTAIFRKLNVRTR
TQAALLLQQLESIPSQ
>Pfl_0967 Lysine-arginine-ornithine-binding periplasmic protein
MKKFPLITGLALSLLACSSAFAAEKTLRIGIEAAYPPFASKTDKGEIVGF
DYDIGNALCAQMQVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKK
SVDFTHKYYFTSSRLVMKEGASVDDQYASLKGKTVGVQRATTTDRYATEV
FEPKGINVKRYGNNEEIYMDLAAGRLDAIFADTIPLTDFLSMPRGKGYAF
VGPELKDPKYVGEGAGIAVRKGNTELVSQLNTAIDGIRASGEYQKISEKY
FKSDIYGD
>Pfl_1533 PAS/PAC Sensor Signal Transduction Histidine Kinase
MPQASQMSSVPESSGQLPSVEQASRQGLEQAFALFNQMSSQLTDSYSMLE
ARVTELKGELAVVSAQRMQELAEKERLANRLQNLLDLLPGGVIVIDGHGI
VCEANPAAIELLGLPLEGELWRHVIARCFAPREDDGHEISLKNGRRLSIA
TRSLDAEPGQLVLLNDLTETRHLQDQLARHERLSSLGRMVASLAHQIRTP
LSAALLYASHLTEQELPVATQQRFAGRLKERLHELEHQVRDMLVFARGEL
PLTDRVTPNALMQSLQAAALTHVQDLPIRWQCDSHAGELLCNRDTLVGAL
LNLIENAIQASAGEVRLKVHCYTRDNTLRLCVSDSGSGIDAAVLARLGEP
FFTTKVTGTGLGLTVVKAVARAHQGELQLRSRVGRGTCAQVILPLFSAVQ
GAE
>Pfl_1210 extracellular solute-binding protein, family 3
MKKALLTLSALALCMAAGSALAKEYKELRFGVDPSYAPFESKAADGSLVG
FDIDLGNAICAELKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTEARE
KVIDFSSELFSGPTAYVSKKGSGITDDVASLKGKTVGYEQGTIQEAYAKA
VLDKAGVKTQAYQNQDQVYSDLTSGRLDAGIQDMLQAELGFLKSPQGADY
EVSKPVDNHLLPAKTAVGIKKGNTELKALLDKGIKALHDDGKYAEIQKKH
FGDLNLYSGK
>Pfl_4487 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVAGDAER
ILDMFRDPSTQAVYSLDREMGMQVIEGLFQDDAVRQASIGHPNEAMLAQK
SRELQHSNSRWLTDLILGQERTFTTQLVGRGPYSEYYGDLSITLDTATYG
QGFIVSSVIIFISGVLRALAMGLVLYLVYHWLLTKPLSRIIEHLTEINPD
RPSEHKIPQLKGHEKNELGIWINTANQLLESIERNTHLRHEAENSLLRMA
QYDFLTGLPNRQQLQQQLDKILVDAGKLQRRVAVLCVGLDDFKGINEQFS
YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELA
QSILDDLEAPFALDHQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLA
KTRSRNRYQFYIASVDSEMRRRRELEKDLRDALLRDQFYLVYQPQISYRD
HRVVGVEALIRWQHPEHGLVPPDLFIPLAEQNGTIIAIGEWVLDQACKQL
RDWHDQGFVDLRMAVNLSTVQLHHAELPRVVNNLLQMYRLPPRSLELEVT
ETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIISEG
CHEGQGYHYSKPLPARELSIYLKQAQRSNAAIL
>Pfl_5150 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MPRLASVLFLLPLMIWTATADALTLNDEERSWLAAHPDLRLGVDASWPPF
EFRDDQSRYQGLAADYIDVIRQRLAIKLTPIEPVSWTVVLEQAKNGTIDL
LPGIMSTPERQSYLSFTRPYLDFPIVILAHVGGPQPHKLEDLYGLKIAVV
ENYAPHELLRTHHPDLNLVAMPNVSSALQALATDEVDAVVGDLASSVWSL
RQLKLDGLYVSGETPYRYQLAMGVPRDNKMLVGILDKVLADMSPEEISSI
QEHWVGNVLDHRTFWSDLLIYGLPGLSLLVIVLAVVIRINRRLSSEIARR
IDLEQELRSSEYHYRGLVESLSAIAWEARISDFTYSYVSPHAEDLLGYPL
SHWLIPGFWRNIIHPADLTRAQSFCDHEVLAGRDHSLDYRVITADGRCLW
VRDIVSLIEHGHEPVMRGLMIDISETKRTEEALRLSEQKFASVFQQCPDI
LVIARLSDGCLLEVNEAFEEQIGLKAEEVIGQTATELNIWGIPGVGPGLL
QRLQAGSIRNLEMPFRRNNGQVFTGLISAEPFELDTTPALVVVVRDITQL
KETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFSRITGFNS
AMSVDRSALDLGIWVNLNERKQMLDLLHRDGFVRDFSCHIRRSDGQIRLC
EVSSRPLPIGDEDCMLTIARDITERHLMQEKLQQAATVFESTAEGVLITD
TQQHISAVNRAFTEITGYSESEALGHTPRLLASGLHDSAFYAAMWHQLTD
EGHWQGEISNRRKNGELYPSWLTISAVRNRDKFITHFVAVFADISSLKHA
QAKLDYQAHHDPLTGLPNRTLFESRLLTALNSQQENGGQGAVLFLDLDRF
KHINDSLGHPVGDLLLKGIAVRLKEQLRDIDTVARLGGDEFIILLPGLQQ
PGDADNIATKLLNCFGAPFQAGEHEFFISASIGTSLYPRDGCDVATLIKN
ADAAMYRSKAKGRNRVESYTRDLTAQASERVALEHELRRAIEREELYLYY
QPKISLDDHSLVGAEALIRWRHPNFGEVPPEHFIPLAEENGMILQIGDWV
LETACRQMFEWGQIYESLGPLSVNLAGAQLRQPNLLGRIEQLLKDNRLRP
ELLQLEITENFIMSQAEEALAVLHQLKHLGVQLAIDDFGTGYSSLSYLKR
LPLDILKIDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTVIAEGVETQAQ
QQFLAAEGCEQIQGYIVSLPLPPEEFAATFLRISVSDFSDSTAEKPSL
>Pfl_3140 PAS/PAC Sensor Hybrid Histidine Kinase
MQFLSDSHGCDGWQGEMAGRIRAFDWSRTDLGPLETWPASLCSTVQLMLA
SPLPMVMLWGHAGYMIYNDAYSRFAGGRHPYLLGSPVELGWPEVADFNRH
VVDTCLAGGTLEYRNKVLVLLRDGVPEDVWLDLYYSPVANDAGVPSGVMA
MVVETTELVLSERLRQAAEDAYRADNERVRLALNAGALLGSFVWDVRNNV
LSADERFARTFSFPPDQDLTNLPQHITEAHIHPDDRSWVQECVENAVRTG
EPYNAEYRVIRADGSFLWVLASGCCEFDEQGQPFRFPGVLIDIHERKIAE
ESLLKFTRNLEQRVADEVGARLSAEEQLRQSQKLESIGGLTGGVAHDFNN
LLQVIAGNLHLLARHEPNNANVQRRVSASLAAVERGAKLSSQLLAFARRQ
PLSPAVCNPRQIFEGVGELLQRALGETIQIDVQLPEDPWHINVDRNQLEN
AILNLAINARDAMKGEGTIVLGASNLSLDRAFCSGKGIVPGDFVRVSVSD
SGVGIAPHILEQVFEPFFTTKADGQGTGLGLSMVFGFVKQSGGHVEIDSQ
VGQGTRVQLYFPRSLRAVGQAAPSVETPLTGGHETILVVEDNEAVRTSAV
ELLREEGYRVLTAGNGDAAMQMLMEGARVDLIFTDVVMPGLIKSSDLAAW
AKVQMPPVAVLFTSGHTRDIISRNHQLSPDTHLLGKPYGPEALLQMIRSV
LST
>Pfl_4211 Periplasmic Sensor Hybrid Histidine Kinase
MIFRRWDINTRTQLISLGPALLLTLLLISFFTFVRIQDLRQELNHTGQLI
ANQLAPATEYGVISGNNEVLESLLKATLATPNVRFLEVQDSANRILSYVE
QPADAHNRPHQVEVFQAPVRLQRIALHNDFFQDGKSSPGVASEDYLGRVI
VGLSNDAFSQRQQEILLKAGILALFALLFTFVLARRLAGSLSQPIRDIGN
AVKAIQDGDYKTPLPIVDDTELGALSQHINNLAQALEQASREQHQAMAQL
IQTREEAEKANNAKSDFLAMMSHELRTPMNGVLGMLQLLETTDMTEEQVE
YAALASESTEHLLKVINDILDFSRIERSELELEHIPFNLAEVIGACAQSF
QHSAAQRGLALQLRIPEDLRDLQVQGDPTRIRQILVNLVGNALKFTEQGR
VSIEAQWQSLDHELLWFTCAVRDSGIGISPESLELMFNAFQQADSSISRR
YGGTGLGLPIARTLAERMGGTLRAQSEEGRGSVFTLEIPLALYKQALPAL
AAPRTLNGASHGEGRNVLLVEDNPVNQTVIEAMLRSLGFTVSVATDGVQA
VRSAGDNRFEAILMDCRLPLIDGYEATRRIRQLPGCGQVPIIALTANALQ
GDRENCLAAGMNDYLAKPFKHNDLQQILQRWVQ
>Pfl_3423 Possible Sensor with PAS/PAC domain
MSRDVLTTETNRRQLQQIIAGLSDGVILLELDQTILWANEAALAMHGVSR
IGELGNNAGEYVERFNLRYRNNHTLTPEQYPISRVATGETFSDVLVEVSP
RSDEERTWVHSVRSMVLTDRDGDIESLVLIMSDVTDWANAEQRFEKTFNA
NPAPAVICRLSDLRYIKVNPGFLEMTGYTRDQVIGASTYELDILEQAERK
DLAIQRLRDVATIPQMQAELRLPDGGSKQVIVAGQPLVLNDEDCMLFSFV
DMELRHKAEVALRQSEERFAKAFRLTPVPILICSADEQRLIDVNQAFLDT
LAYESDDVLGKTVAQLDFIDEPAERARLLAALEKTGRVDRVDMRIRRKDA
ELLECAMSADTVNIQDAVCYLLVLMDITERKRTELELVAAIEEVMKDASW
FSRTLIEKLANVKKVNSPQLPSVSFTDLTARERDVLALICEGLADKEIAA
RLKLAPNTVRNHVATVYSKLDVHSRSEAIVWARERGLFSGGGRGQR
>Pfl_1789 Putative diguanylate cyclase (GGDEF domain)
MSLHPVRPKILGFISEDVSAWLVGVLVLLAGGILTGLLAWGTLNQFHSQL
RQRFQLLANERYSRIEERFQDQEQRLDGLRRFFANSESVSRAEFDGYTHP
LLLRTQAYSFALRVSGAERAAFEQRVRDEGLSTFSVRELNARGELQLASA
RDEYVVVLYSQTQSRLGSPLGYDLLAQPLRRSTLERADQLRSLAVSQPMH
LVGIEPAYARGVLLVAPVLREGEPRSYGYVMAVISMRQLLADGLPDAFHD
YLSVRILDLSTTDQHEVLFESTNEPAQSDLSATRLVRMADHDYQVDILPS
EAFMQANHSSVGSVVVLGGLLSLLLSALLYVLVSQRQRALRMVELRTQEL
HEREQELRGTHGQLRGVLNAATQVAIIATDLRGVINTFNPGAEQMLGYHS
NEVVGHMTLENLHFPRELVARAAELSARYGKAIPTCQAMLVEGGEVGGHE
AREWTLVRKDGSHLPVNMLATPVLDEQGLWVGHLAICIDITERKRVHEAL
AARDVLLKKLSAHVPGGIYQFKMEFDGRFSVIYASDGIREIYELEPDVLL
LNAEAIFTRIHPQDVSRVRKSIRASADNLSPWREEYRVQLPERGLRWVRG
EATPEELPGGGVLWHGYISDISDLKRVEEELRALSVTDSLTGIHNRRYFQ
ERLTTEMARVERGGGELSVIMLDIDHFKRINDQYGHAVGDRVLQAVCERI
GHRLRRTDVFCRLGGEEFMVLCPDIDGDHAHMLAEELWHSLRSAPIDVVG
VVTASFGIASWRPGEGADALLLRADSGVYAAKQGGRDRVERHMN
>Pfl_3083 PAS/PAC Sensor Hybrid Histidine Kinase
MNAVPNTNDAQTLIARTDWSRSPLGAAGTWPQSLRTAVDIVLHSPMPMLL
LWGPQLTQIYNDGFALLAGNKHPHAFGQPAHQIWPELRDFTDPIYSAVLQ
GQVRTYSERRFTLQRDGQESDFWLDLTYSPIRDESAQVAGILVTAIETNE
RRRIALELQQRSENSLKAQRESEERLQLALAATDAVGTWDWDIGEDRFIA
DAHFAQLHGVDPALAGQLPISEYLHGVHPEDRAMIARSIKHCITHGTEYA
EEYRLLQANGELRWVFARGRCYKDHHGRPTRFLGAALDLTERKHTEQALR
QSQTELQLIINAMPILISYVDHEERFRLNNAAYLDWYGLTPQELYGRTIR
EVIGEEAYFLRAPYIAEALAGRPCSFSLYTPHRDGSQRHALMNYLPRHGA
DGAVNGFYIFVIDETERKKTEEALRNLNETLEERVSARTEQLAQANQRLQ
NEMFERERAEDALRHAQKMEAVGQLTGGIAHDFNNMLTGIIGSLDLMQRY
IASGRADEIGRFTDAAVSSANRAAALTHRLLAFSRRQSLDRKTIDVNELI
HSLEDLIRRTKGDPIELKLRLADNVWPVSTDVSQLENALLNLVINARDAM
PDGGELLIETANVYLDGNDITTLEPVKAGDYLMLAVSDNGTGMTPSVRSK
AFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGHVSLDSLPGQGTCVRLYLP
RLYALEAEQPAIEAVAEAPAVATGETVVVVEDDPAVRMLVMDLLKELGYR
AHEAEDAKGALPLLESDLRVDLLVTDVGLPGMNGRQMAEIARQHRPGLKV
LFMTGYAQKAAERQGFLEDGMDMVAKPFSIEQLAGKIRTMISQNP
>Pfl_4535 extracellular solute-binding protein, family 3
MRIVPHILGAAIAAALISTPVFAAELTGTLKKIKESGVITLGHRDASIPF
SYIADASGKPVGYSHDIQLAIVEAIKKDLDLPNLQVKYNLVTSQTRIPLV
QNGTVDVECGSTTNNVERQQQVDFSVGIFEIGTRLLSKADSKYKDFDDLK
GKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF
MMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGDEPFKKAVDDA
IKATYASGEINKIYEKWFMQPIPPKGLNLNFPMSDELKALIANPTDKAAD
DKKS
>Pfl_3849 Response regulator receiver (CheY) modulated Serine phosphatase
MPGLCPACYANLILAPFAHMPKTSATLLIIDDDEVVRASLAAYLEDSGFS
VLQASNGQQGLQVFEQDTPDLVICDLRMPQMGGLELIRQVTERSPQTPVI
VVSGAGVMNDAVEALRLGAADYLIKPLEDLAVLEHSVRRALDRARLLLEN
QRYREKLEKANRELEASLNLLQEDQNAGRQVQMNMLPESPWAIDEFRFAH
QIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTR
LLFESKRNGTLPEFKPSEVLGHINRGLISCKLGKHVTMVGGVIDEETGLL
TYSIGGHLPLPVLYTPDSVRYLEGRGLPVGLFNEATYEDHVLELPPTFSL
TLMSDGILDLLPEPTLKEKEAALPQKVKSAGGSLDGLRQVFGLATLGEMP
DDIALLVLSRNL
>Pfl_4664 Heavy Metal Sensor Signal Transduction Histidine Kinases (STHK)
MSSNSIALRLSGMFTLVALLVFLLIGGALYQQVDKGLGLLPEAELDARYS
VLESALNRYGTPEHWVKINAKLKLLGEEDKRIRFWVVSGNPGYEFGEPDA
LIRAFAQGPLGMRDLQLPDHPYPLKVLLTELPAKDQRPPLRFMIGIDTET
FHQTQHQLLIALVSLAVIGVLLASALGYWVARIGLKPLIKLSHEAQRLAP
PLRAGRLRLSPLPPELEQFVESFNSTLERVEQAYSRLESFNADVAHELRS
PLTNLIGQTQVALTRGRSAEHYFEVLQSNLEELERLRSIINDMLFLASAD
QGSKATKLTSTSLADEVATTLEYLDFILEDAQVQVRVSGDARVQIEIAHL
RRALINLLSNAVQHTAPGQVIEVKIAAEEHQVSIGVANPGLPIASEHLPR
LFERFYRVDASRSNSGNNHGLGLAIVKAIALMHGGDVFVRSDRGMNTFGI
HLPV
>Pfl_0651 Response regulator receiver domain protein (CheY)
MSFSHTPRQQLLLVDDEEDALLELAELLEGEGFVCHTATSVKLALHHLTR
HPDIALVITDLRMPEESGMSLIKRLREHTSRQHLPVIVTSGHADMEDVSD
MLRLQVLDLFRKPIYHVRLLETLDNLFPKPRVNVS
>Pfl_5591 hypothetical protein
MTRFAGFILLFVSLYGCAAQQVYNNHVYMENRCGQPLEMKVSNSSNMHSL
DRTLTVAAGARALVASFASYGEDVIEQIPSNYQLTIDDAAGSKSIDATQL
KQRLAVVEKVTEGTQREWTIREASICP
>Pfl_2709 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MDISSRATSLPTLQGSVTRRLAVAVGALFIAGVMAATAALLGIATQLDED
DVNDVRFYSARALENRITASKNYITSYAYWTTAYERLSGTVDTNWAYTEQ
NMGKTLFTSDGYDGLFVLDRERTKYAVVRGQMLDAQLPQFLQLSANSLVE
QVQSQPDLTKPVSTYSLFEDWPALVTAAAILPNDERPVGDPQKTSVLVFV
DNLTPTKLRKIGSGYGLNNLSLAPDGTIDPGQPRVPLDSTGYSLVADLER
PGRHLLWSLLPTLGPALLVLMALTVWFFRHALRSSRYVDDSFEAMQASNQ
ALLASNRALEASEERFRAVAEAASDWIWEVDEALSITYLSTRFSAVTGYP
QAQWIGKHIGHLLVCDTTPLDLWLKKLDEESNASDLRCTYRDREGQQRHC
RLSARPIVESTAVVGYRGTASDITDEVAAHAQIQHLSLHDALTGLPNRNK
LSRYLDDALLLKEHAPPLSVLMIDLDNFKPINDSLGHPAGDAVLQEVAGR
LRECTRDHDIVARLGGDEFVVVLCGMDTHQEIDRFCTRLIGSLHQPILFE
QQPLHIGASVGIALSRRHGYVASELIRCADIALYQAKSEGKNTWCYFEAH
MSDQIQTRRQMEDDLRRALTNNEFVLHFQPRYKVDGKEIVSVEALVRWQH
PVKGLLGPDLFIPLAEQTDLIVPLGRWVLREACETALTWPADILLSVNLS
PAQFAISDVVEDVREVLVGTRFPASRLELEITENVMLNDTDGALTTMTAL
KELGVRLNMDDFGTGYSSLGYLRAYPFDGIKIDKRFIASISTGANDRAVV
QAIIGLGKAMGLTVTAEGVETEEQLDILGKDQCNEVQGYYMSRPIDRAAF
ASLLQASRAAAVDPSRQRKGRVT
>Pfl_2601 chemotaxis sensory transducer
MPGHRNVVGCWRWFITRKRIRSDSVMNSLRSVSISRRLWLILIVAVVMLL
TLGVLMLKQIHDDLYHAKAQKTQHVVQTASGLLTYYQGLEAAGTLTRDVA
QKQALTAIRGLRYDQNDYFWINDLTPVMVMHPTNPKLEGQNLSAIRDPDG
FAVFNEMVAIAKAKGAGMVDYRWPKPGASEPVAKTSYVKLFEPWGWVIGS
GVYVDDVQAEFQGQVIKASVVGLVIAVIMALLVILIARSIVRPLQETVNA
MANIASGESDLTRSLDTHGQDEVTQLAHHFNAFTAKLRRVIGDLQVSASA
LGQSSSELGNDAAQAQQRSQQQSQQMELVATAVNEVTYGVQDVAKNAEHA
ASEMRDAEAQAQQGQINIDGSLQQIDKLSGTIDQAVEVIRTLATESTQIG
SVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQK
STAEIQTMIESLQNHSEAAVKVIGDSSKASQLTIEQAGLASASLNAIGQA
LRNLNGLNASIASATLQQAHVVEDINQNVTQAAGLSHSTALAAEQSSVAS
VKLGQLSEQLNGLLRQFRV
>Pfl_3508 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain
MTQLWISFAIVVVLLVVIAVLIRRVRALRQQLAEYRELLTRAAEGQNIRQ
DGDADRFKRSQYFARIGTWDWEVDTDRLYWSDAIFGMFGFKIGEVTPSYA
LFCSCVHPDDRARVRAGELRCLETGENHDEEYRVVWPDGTIRWLRETGNV
VRNDHDAVIKMMGVVRDITEEKASASYLQHLAHFDPLTGLPNRLVLEERL
SEALEHARMTETRVALVFIDLNGFKAINDRYGHAAGDRVLITTATRLKRI
LRVSDTVARIGGDEFVVILQGLAPGLNLQDEARSICQKIFIELSPPIPIG
NEQRHIGTSLGVAVFPDHAPTMDRLLHIADLAMYEAKRSGNNQYRLGGGQ
TLSHGRAD
>Pfl_0378 chemotaxis sensory transducer
MYRWLAESLGNVSVKRKLGIGFGLVLLLTLLITFTGWTGMSGIISRGDKL
GFISSLNELTKDLRLARLDYEARRGEQGPGAVNDLLGKLDSGLQSARGMI
EQPSDVAMIDQQLAAVAEYKRAFADMTQATVQREDARSKLGASADNAVAK
VSEVEKSLLQGDSVAQFNSVIELSKLLQQARYQVRGYTYSGKAEAEQPAL
DAIAAALNNLESLPSKLPEQHIANLQQATESLKAYRAAVSQFRDSQVNNA
KAMARMTAQGDILLDVSKKLTESQTIVRDTDAAHAKNMLMIATLLALAFG
LLAAWAITRQIIIPLEQTLKVAERVAAGDLTHNLVSLRRDELGQLQRSMQ
SMTQGLRELIGGISDGVTQIASAAEELSAVTEQTSAGVNNQKIETDQVAT
AMNEMAATVQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLAAE
VGHSTEAMGELKRESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAG
RGFAVVADEVRSLAQRTQKSTEEIEELIVGLQNGTQQVATIMDNSRTLTD
SSVELTRRAGGSLESITRTVSAIQAMNQQIAAAAEQQSAVAEEINRSVLN
VRDVSDQTSAASEETAASSVELARLGTHLQTLVGRFKV
>Pfl_5185 Cyclic nucleotide-binding (cNMP-BD) protein
MVMSKADAFTQAGKTAVLQNIQGTLQFLQRFPPFNQMEHAHLAYLVEQCQ
LRFYGQGESIIKPADGPVEHFYIVKQGRVVGERPHTAKGGTETTFEITTG
ECFPLAALLGERATRTEHLAGEDTFCLQLNKLAFIKLFALSNTFRDFALR
GVSSLLDQVNQQVQQKAVETLGTQYSLNTRLGELAMRHPVTCSSSTPLRE
AVKLMHEQQVGSIVAVDEHKAPLGIFTLRDLRHVVAEGVGDFSEPIERHM
TRSPFYLSPDHSAFDAAIAMTERHIAHVCLVKDRRLCGVVSERDLFSLQR
VDLVHLARTIRSAQRVEQLVTLRGEIGQLVERMLAHGASSTQITHIITLL
NDHTVCRVIELTLAEKGDPGVPFSWLCFGSEGRREQTLHTDQDNGILFDA
RDAAHAAEIRGKLLPIAQQINTSLAQCGFTLCKGNVMAGNPQLCLSRAEW
ARRFAAFIREATPENLLGSSIYFDLRVVWGDEQGCEQLRRGILDQVGDNR
LFQRMMAENALRNRPPVGRFREFVLTRKNGEKATLDLKIQGLTPFVDGAR
LLALAHGIDANNTLERFRQLVDKEVIDRLDGAAYEEAYHFIQQTRMQQHQ
LQTRENLPYSNRVDPDSLNHLDRRILRESLRQAQRLQSSLTLRYQL
>Pfl_4221 Two component Transcriptional regulator, Winged helix family
MTPVSIGQPRILSIEDDPVLGAYVHEHLGRSGFQVTWCQNGSEGLSIARR
QPFDVVLMDILLPGLDGLNVLTQLRQSHSTPVLLMSALGAEADRISGFRL
GADDYLPKPFSMAELHVRIEAILRRVALDRRPTAVAAVVPVGGLRFDDEQ
CEVFYLDQPAGLTRSEYRLLETLNRNDEEVLSKAFLYQHVLQRGYAAHDR
SLDMHISQIRRKLKSVGYTEREVRTVWGKGYVLSAVDESV
>Pfl_5576 Protein serine/threonine phosphatases
MLVASPWRSAARTDPGKVRSRNEDAFLDTPQHGLWVVADGMGGHQGGDIA
SQLIVASLAELPQHEDFDERLKAIRQCLHWLNRRLGQELTVTAGRHDSIM
GSTVVALLVDGNRAACIWAGDSRCYMWRGQRLYQLSKDHSLQQQLIDEQQ
MSVEQAAAHPAAQALTRAVGAAEQLTLDVLELEVYPGDVFLLCSDGLYQG
LSSDALGNALSLAAPHVALERLFDGALRGAARDNLTAVVIRQ
>Pfl_1541 Anti-Sigma-factor antagonist (STAS)
MSVVTEVSADKKKLTISVKGRFDFAKHQEFRQSYEKEQPESVIVDLKEAT
YLDSSALGMLLLLRDHVGGDDSEIRVVNSSSDVKKILAISNFDKLFDIS
>Pfl_4343 chemotaxis sensory transducer, Pas/Pac sensor
MFNLHHKADLQEIERFSCALTEANAKLAAISRSMAMIEFTPEGIVLDAND
NFCKTMGYSADEVRGKHHRIFCEEAFYRSEEYAKLWRDLARGEPISGTFL
RLNKSGREIWLEASYMPVYGPDKQVRSVIKVAADITARVNKEKEEESMLA
AIGRSMAVIEFTPEGNVITANDNFLKTMQYSLNEIVGHHHSLFCHRVEAE
SAQYKAFWASLNRGEYHSHRFERKNKSGQTVYLEASYNPLFDAKGRLYKV
VKFASDITHQMTTLQTAAESAHSTSVQNDACAQKGSQVVQQTVQIIQDIS
RDLNEAALSIDAVSKQSDIIGTIVQTIRGIADQTNLLALNAAIEAARAGE
HGRGFAVVADEVRSLAARTSQATVEIVDVVRKNHELSLSAVSSMQSSLSR
TGLGVELANEAGDAIREIQQGSRHVVDAISQFNETLRLE
>Pfl_2650 Response regulator receiver domain protein (CheY)
MSVDAQDVVLVVEDEPVILMVLTDYLSGQGYRVLQAENGEQAFEILASKP
HLDMLITDFRLPGGISGVQIAEPAVKLRPDLKVIFISGYPQEIRETGSPI
TRRAPILEKPFDLDVLQEKIQELLA
>Pfl_3125 Putative FecR
MRPDETLIDEAAQWMALLQSGHVSLQERAAFDAWRTADSRHQQIIEQMGG
GLNLLRHANLRGLPRESVLHSLNAPSSRRRFLSGSLSVLGIAVLAGLLGR
RYGWLPEAGELSTGTGERREFTLADGSALTLNARSRVVPRFNNIERLLDL
RSGELLIDVAKNLARPFVVETEHGRMRALGTKFLVQRGEDSTRLVMLHSQ
VEVVTASGARQVVEAGESLLFNAQEILALEPGNGQESAWVQGRLEVRDRP
LSEVIDSLRSYRRGILHLSPEVAGLRLSGLYPLDDSDRTLQLLERSLPIR
VTWHNPYWVSIEARL
>Pfl_0579 Histidine Kinase
MRLSEFILANIDAIVDEWEKFAATITPPADHLDSAGLRDHASAILRAAAR
DMSKPQSRDEQVAKAKGEGPEKSPSLDEAGASHGELRHTVGFDLVQMTSE
FRHLRAVVIRRWVEHIELPDTTCFQDMIRFNEAIDEALAESTAAYAEQVN
RSRDIFLAILGHDLRAPLQAVSMSTELLMRKTTLEGDALTCALNIKQGAR
HMAAMVSDLLELVRSRLGRSLPIEPAPMDLADAARAAIAEACAGNPDSDP
TLNTEGDTRGVWDAGRIDQLLQNLIGNALQHGSDPREVIVTLKGEARQVL
LTVHNYGPPISEEAIGTIFDPLVRSADEELGQPSTSLGLGLFIVKEVVTA
HGGTIEVSSSAANGTLFSVMLPRQV
>Pfl_0202 Two component Heavy metal response Transcriptional regulator, Winged helix family
MRLLVVEDEAKTANFIAKGLGESGFAVDVALNGLDGRYFIEQQEYDLIIL
DVMLPGLNGWQLLQLIRQRGATPVLFLTAKDAIEDRVRGLELGADDYLLK
PFAFAELLARVRTLLRRGPLREAESYNIADLEIDVLRRRVSRGGQRIALT
NKEFALLHLLASRQGEVLSRTLIASQVWNLNFDSDTNMVEVAVRRLRSKV
DDPYMPKLIHTVRGVGYQLEAPDDAR
>Pfl_4951 PhoH-like protein
MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFE
LIGEPKHTTSAENLIRRLYRETKGSELSPDTVHLFLQESAVEQLDNHAPA
EASVALRTKKGMIRPRGLNQLRYVKEILGNDINFGIGPAGTGKTYLAVAC
AVDALEREQIRRILLVRPAVEAGEKLGFLPGDLSQKIDPYLRPLYDALYE
MLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQNTTVEQMKMF
LTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPK
DVVRHPLVQRIVEAYERFETRLADEAPKDTRHDA
>Pfl_3393 UspA
MQAIRSILVVIEPEHAESLALKRAKLIAGVTQAHLHLLVCDKKHDHAGML
SVLKAALLADGYSVTTEQAWNESLHETIIDVQQAEGCGLVIKQHFPDSPL
KKALLTPADWKLLRHCPTPVLLVKTAGSWKDKVILAAVDVGNADGEHRHL
HTTIIDHGFDIASLAKGHLHVITAHPSPMLSAADPTFQLKETIEARYREQ
CRAFQAEFDIDDEHLHVEEGPADVLIPFMAHKLQAAVTVIGTVARSGVSG
ALIGNTAEQVLDQLESDVLVLKPQEVEDHLVELAVKH
>Pfl_3772 Two component Transcriptional regulator, Winged helix family
MRLLLVEDHVPLADELLAGLQRQGYAVDWLADGRDAVYQGSSEPYDLIVL
DLGLPGVPGLEVLAQWRAGGLTIPVLILTARDSWAERIEGLKAGADDYLT
KPFHPEELYLRIQSLLRRSKGQANQPTLKAAGLHLDEGRQCVVRDGADIQ
LTAAEFRLLRYFMLHPEQILSKSHLAEHLYDGETERDSNVLEVHVNHLRR
KLGKSVIETRRGQGYLFGGQAS
>Pfl_1981 Response regulator receiver domain protein (CheY)
MVNKVLVVEDEQLLAQNLQDYLSAQGLEVRIAHDGAEGIGLAETFAPDVL
VFDYRLPDMEGFEVLDAVRQNRTCHFVLITGHPTAEVCERARQLGVSHIL
FKPFPLAELARAVCDLLGIQREAKPGASPSEGFVERRQSRTESFPLQLYD
GSWVLADRRRNRSEAMAPDDDQMLTGE
>Pfl_2176 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
MLVPGKPANEAVRIQALQDLKLLDTAPEERFDRLTRLAKRLFNVPIALVT
LVDKERQWFKSCVGLDTTETPRSVSFCAHAILRDELMLVPDAREDERFHD
NPLVTGEPNIRFYAGYPLTVPSGNKMGTLCLIDTKPRDLDEEERALLRDL
AGMAEQELMAVQMASMDELTLLSNRRGFKMLAQHALDACARLEKPATLLF
FDLNDFKQINDLYGHAEGDSALKTFADVLRIAFRESDVVGRLGGDEFVAL
LTGSSHVETTAIMARLKEILEERNATLHRGYAIRFSVGQIEYNPQRHESV
DKLLADADAAMYEHKQALKRC
>Pfl_1398 Cyclic nucleotide-binding (cNMP-BD) protein
MSEPTLLNNEIRDWLMDCGLFDQLQLADFAAASGYFSISTVAEGEAIFRE
GDAGSFMCIIHTGQVAVQKTGGDGQVVTMATLRSGRAFGEMAVLDGERRS
ATCVAASNCQLLNLGKDSLEKMLNDAPKIAAKIIRALAVSLSKRLRMADG
QLAAQQI
>Pfl_0046 Two Component, Sigma-54 Specific, Transcriptional Regulator, Fis family
MESATEHQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALLQR
QVFDLCFLDLRLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQ
AGAADYLVKPCSPDQLRLATAKQLEVRQLSARLEALEGEIRKPKDGLDSH
SPAMKVVLETARQVAGTDANILILGESGTGKGELARAIHGWSKREKKSCV
TINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADGGTLFLDEIGD
FPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRF
REDLLYRLNVITLHLPPLRERAEDILTLADRFLARFVKEYARPARGFSDE
AREALLGYRWPGNIRELRNVVERASIICPQERVEISHLGMAEQPANNAPR
VGAALSLDELEKAHIGAVLATAGTLDQAAKTLGIDASTLYRKRKQYNL
>Pfl_4317 chemotaxis sensory transducer
MLQKSLRAQILALLSGSLLAMLLIALACFHFLSNGVQNYSQLIAGPLHTS
QLIDEANLQFKVQVQEWKNVLLRGKQPADLAKYWGQFEDRQRDVQNILSE
LANQKGLDPALKTRIERLREEHRLLGAAYQKGRDAYVATGADPTAGDAAV
KGVDRAASDQMSELVAELRKQGTEQSAQISASADRTVWLGLLVMLASGLL
IGLLSLWLVNRNLVEPISKLIDYVTQLSKGRLVERVASDRQDELGNLAAA
ANTLRDFLAETFNHLQRSAKDLDSASGELNAIATLMAGGTNEQFNRTDQV
ATAMNEMSATAQEVARHAADAARAADDADQSAQQGEKVMQSTIHSITQMR
GEIANTATVIRRLEADSGRIGKVLEVIRGIAEQTNLLALNAAIEAARAGE
AGRGFAVVADEVRNLAQRTAESIIEINQIIHSVQTGAVDAAQAIDSGQTR
SDESVEQVTQAGAMLERITHAVEAIRDMNRQIATAAEEQTSVAEDISRNL
TEITSIASTNLDNVQRTESASQNLHGLSGQLNDVTARLSV
>Pfl_3827 Response regulator receiver domain protein (CheY)
MAEHFSALITKHVQTDLAIETGSYASSYQPNEYHGLYRAIFIVIDSPQAL
EDNLALVENLRSDNLKPIICAVITGRGAFNKIKYFLAGADFCLKLNTLSD
ESAELLGEFFDSEEWQRDISLVLDSTRICLSDTSKKLDISFAEMKILQAF
AQTGNHILSHDEIAGIMGLNTHFYDPRALEKSISRLRGKIKDVYGTNAIQ
SIRGYGYRLMRGLISTP
>Pfl_2376 Fe2+-dicitrate sensor membrane component-like
MNLQSPQDADDEILNQAAHWCLRLQDDSCTPDERQAFQQWIQISPRHAFE
YAKMLEVWELSDQLPDEREKSKKRKATTLPCSFEEFQRNLAQRN
>Pfl_0244 extracellular solute-binding protein, family 3
MILSALRRNLLVGSLGLALSAGLLGQAVAGEQLQQIKDKGVINVGLEGTY
PPFSFVDADGKLSGFEVELSEALAKKLGVKAKIQPTKWDGILAALESKRL
DVVVNQVTISEERKKKYDFSEPYTVSGIQALVLKDKAAALNIKSAADLSG
KKVGVGLGTNYEQWVRANVPGADVRTYDDDPTKFADLNNGRTDAILIDRL
AALEYAQKAPKTVAAGEAFSRQEAGIALRKGEPELLAAVNKALDELRADG
TLEKLSKKYFNADVTQ
>Pfl_2920 Putative diguanylate phosphodiesterase (EAL domain)
MPLTVRPRRKRSTRIIVTLLCGLLPIVLGSAILYMQAGRALQQSSQHTAE
EALRQFELMLDNTAQAARELLPLAGQTCETVKLALREQVTRRPFVRSTNL
VWDDNLYCSSLFGNFKEAVNPGDYAQGKLWLMNGNPVTPDTALLVYRLSE
GRGGALTTLDGYHLSNILRLIGRHTLLLLQVGNNWLCADGKVHQGALPAL
PVAQSTLHSSHYAFSVTAAFPEGETWRYMKDEYPPLFSLLMFFGAVSGAI
GYIVQKRSTSPSHEMLRALEAGEFIPYFQPVVHGDSKQWSGTEVLMRWNH
PKEGLVRPDLFIPFAEHSGLIVPMTRALMQQTAVVLGPLSSTYTAPFHIG
INITASHCNDLELVEDCREFLSAFQPGSISLVLELTERELIEPSDITHQL
FAQLRAMGVKIAIDDFGTGHSSLGYLRTFNVDFLKIDQTFVAMIDKDALS
RHILDSIIELSTKLDLGIVAEGVETQAQCDYLAAHHVNFLQGYLFGKPMP
AADFIEALTHH
>Pfl_2279 Two Component Transcriptional Regulator, LuxR family
MDVEPAPERNPESIVFIIDDDAPLREALGSLLRSIGLRVELFGSVADFMQ
YQRPDLPSCLVLDVRLQGTSGLVFQQALADANIHLPIIFMTGYGDIAMTV
RAMKAGAVDFLEKPFREQAMIDAVVAAHTRDRSRREYELRHHELRTRHGT
LTVREQAVMALAVSGLINKQIASAIGLSEITVKIHRSQAMRKMRAQSFAD
LVRMAESLGINH
>Pfl_4004 UspA
MIRSMLYATDLGLYAPLVMQHALAMARTFNADLYVVHAVEPMGLFAESVL
QSYLDEQALNEFHSQGLKTVIANIEQRVLDSFREELGDEGEQDLQRIRAV
RVLQGDPSQVILDQVQKLSVDLLIVGSHSHGVGAETPLGRTAARLLQLSK
VPVYLVPLVERRRREDR
>Pfl_3520 Periplasmic Sensor Signal Transduction Histidine Kinase
MSLPNPSDGWRSSSSRLLALYSSLFVAWSAILMGVMYFEVSGYLDNLAKH
SLMQRQHLFKHFRGDQLEEALAASMTFDIRGIDAYGLFDAQHRYLGGALQ
KIPEGLPLDGKIHMLSECADSDDPTLPADSCDAVATPTRDGRWLVLLRDN
GSLFAVTRIILHALLWGVSLTIVPGIIGWHLLRRRPLRRIRAIQASAQSI
VAGDLTHRLPLSNRRDELDMLAAIVNAMLDRIERLMNEVKGVCDNIAHDL
RTPLTRLRAQLYRMQQQAGEGSPEAAQLDLVLAEADTLMARFRGLLRISE
LEDRQRRSGFVELDPVLLLQELHEFYLPLAEDDELRFELNMPETLPMLNG
DRALLFEALANLLSNSIKFTPAGGTVVLRGVNDAGHTRIEVHDSGPGIPE
SEREAVFQRFYRAEGGQPQNGFGLGLSIVAAIVNLHGFSLEVGRSDLGGA
KLVLDCRQSLISQS
>Pfl_0347 GTP-binding protein TypA
MIENLRNIAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEK
ERGITILAKNTAINWNGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVD
AQDGPMPQTRFVTKKAFEAGLRPIVVINKVDRPGARPDWVLDQIFDLFDN
LGATEEQLDFQVVYASALNGIAGLDHTAMGEDMTALYQAVVDHVPPPAVD
RDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTPVVAISADGKRRNGR
ILKLMGHHGLHRVDVEEAAAGDIVCISGFDELFISDTLCDINNVEAMKPL
TVDEPTVSMTFQVNDSPFCGKEGKFVTSRNIKDRLDKELLYNVALRVEEG
DSADKFKVSGRGELHLSVLIETMRREGFELALGRPEVIIREVDGVKQEPF
ENVTIDIPEESQGKVMEEMGLRKGDLSNMVPDGKGRVRLEYNIPARGLIG
FRNQFLTLTNGAGILTSIFDRYAPVKSGHMSGRQNGVLVSVETGKALTYS
LETLQARGKLFVEHGQEIYNGQIVGQNSRDNDLGVNPTKGKKLDNMRASG
KDETIALVPPVRFTLEQALEYIQEDELCEVTPKSIRLRKKILDESERTRA
AKKAKA
>Pfl_0855 PTS IIA-like nitrogen-regulatory protein PtsN
MIRLESILTPGRSLVNVPGGSKKKALEQIANLIAREVPDLEMQDVFEALI
AREKLGSTGFGNGIAIPHCRLKGCEAPISALMHLDAPIDFDAIDGAPVDL
LFVLLVPEAATDAHLELLRQIASMLDRKDVRDRLRSAPSNEALYQVVLEE
QNRP
>Pfl_3303 Two component Transcriptional regulator, Winged helix family
MDHINHILIVDDDREIRELVGNYLTKNGLRSTVVADGRQMRSFLEANTVD
LIVLDIMLPGDDGLVLCRELRAGKHKAIPILMLTARDDQTDRILGLEMGA
DDYLTKPFAARELLARINAVLRRTRMLPPNLLISETGRLLAFGRWRLDTT
ARHLLDEDDTMVALSGAEYRLLRVFLDHPQRVLSRDQLLNLTQGRDADLF
DRSIDLLVSRLRQRLLDDSREPTYIKTVRNEGYVFSFAVEMLAES
>Pfl_3855 Two component Heavy metal response Transcriptional regulator, Winged helix family
MKLLIVEDQPKTGQYLRQGLTEAGFNTELVADGTTGQQLALSGDYALLIL
DVMLPGRNGWQILQAVRSAGLETPILFLTAKDTVEDRVHGLELGADDYLV
KPFAFSELLARVRSLLRRGSSTPQETSLRLADLSLDLIRRRVERSGQRID
LTAKEFALLEMLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRL
KIDDDFPNKLIHTVRGMGYVLEERAD
>Pfl_5377 PTSINtr with GAF domain, PtsP
MLNTLRKIVQEVNSAKDLKAALGIIVLRVKEAMGSQVCSVYLLDPETNRF
VLMATEGLNKRSIGKVSMAPNEGLVGLVGTREEPLNLENAADHPRYRYFA
ETGEERYASFLGAPIIHHRRVVGVLVIQQKERRQFDEGEEAFLVTMSAQL
AGVIAHAEATGSIRGLGRQGKGIQEAKFVGVPGSPGAAVGTAVVMLPPAD
LDVVPDKTITDIDAELALFKTAIEGVRADMRALSAKLATQLRPEERALFD
VYLMMLDDASLGSEITNVIKTGQWAQGALRQVVTDHVNRFDLMDDEYLRE
RASDVKDLGRRLLAYLQEERQQNLVYPEKTILVSEELTPAMLGEVPEGTL
VGLVSVLGSGNSHVAILARAMGIPTVMGLVDLPYAKVDGIEMIVDGTRGE
VYTNPSEVLRKQFTEVVEEEKQLALGLDTLRDLPCVTLDGHRMPLWVNTG
LLADVARAQKRGAEGVGLYRTEVPFMINQRFPSEKEQLAIYREQLAAFHP
QPVTMRSLDIGGDKSLSYFPIKEDNPFLGWRGIRVTLDHPEIFLVQTRAM
LKASEGLNNLRILLPMISGIHELEEALHLIHRAWGEVRDEGTDVPMPPVG
VMIEIPAAVYQTKELARMVDFLSVGSNDLTQYLLAVDRNNPRVADLYDYL
HPAVLQALQTVVRDAHAEGKPVSICGEMAGDPAAAVLLMAMGFDSLSMNA
TNLPKVKWMLRQIHLSKAKDLLAELMTIDNPQVIHSSLQLALKNLGLAKM
VNPAAVKPL
>Pfl_5610 Response regulator receiver domain protein (CheY)
MSKISVLVVDDASFIRDLVKKCLRNYFPGIRTEDAINGKKAQAMLAKEAF
DLVLCDWEMPEMSGLELLTWCREQDNLKTMPFIMVTSRGDKENVVQAIQA
GVTGYVSKPFTNEQLLTKVKQALNKVGKLDTLMNSAPTKMNSAFGNDSLS
ALTGGKAAVVGSAPAAAAANPFAKPAAAAPAPAAAPQRGLLNSPPVKAPA
ASSAPAGGRGQGQLRLPSGTQQCVIKALSIKEALLVVKRTDTLPQILDSA
VLDLEQGDNAEIARLNGYLHAVVAHEPKPDSDWLQLTFRFVDQDAQKLDY
ISRLIARGTAQKHFVPGA
>Pfl_3974 Two Component Transcriptional Regulator, LuxR family
MNSVFIVDDHPVIRLAVRMLLEHEGYKVVGETDNGVDAMQMVRECMPDLI
ILDISIPKLDGLEVLARFNAMSSPFKTLVLTAQCPTLFGIRCMQSGASGY
VCKQEDLSELVSAIKAVLSGYNYFPSQALNPVRHDDVRYAELELFKSVND
RELMVLQLFAQGRTNKEIAKGMFLSNKTVSTYKKRLMQKLKAKSLVELIE
MAKRNALV
>Pfl_4457 Periplasmic Sensor Signal Transduction Histidine Kinase
MLPTSRTLRLSLYTLLIIAGAALAATLAIRHAERQALEEDAARANQQLAL
YANSLHTLIDRYRALPAVLALDPQLRAALAGPVSTEQQTALNLKLEKING
AAQSSTLELLDRTGLAVAASNWRLPSSYVGHNYGFRPYFSQTRTQGTGRF
YAVGVTSGIPGYFLSSAVLGDNGEFLGAMVVKLEFPELEREWSQGSDTLL
VSDARGIIFIANQPGWRYRLLHPLSPADYREIKATRQYDKQSLVPLTHLA
LRSFDDNSDLRRVEGPQGTADYLWESLPLTAEGWTLHLLRRPQLSFEDQR
NAGLAAAGVWLALVFLLLFLNQRWRLAKMRQRSREELEQLVEERTRDLRT
AQDGLVQSAKLAALGQMSAALAHEINQPLTAQRMQLATLRLLLDHGRVDD
AYKALKPVDDMLTRMAALTGHLKTFARKSPSGLRERLDLATVVDQALQLL
DARLRDEQVSLVLHLTRPAWVRGDAIRLEQVLINLLRNALDAMQGKPCKR
LEIRLDADEQLWRLSVIDNGGGIADEHLGQVFDPFFTTKPVGDGLGLGLA
VSFAIVHESGGRLCVENGDNGAVFSLTLPIDLEAHI
>Pfl_4373 Two component Transcriptional regulator, Winged helix family
MSSVNKSILLVDDDQEIRELLETYLTRAGFQVRATADGAGFRQALNEAPS
DLVILDVMLPDEDGFSLCRWVRQHPRQAQVPIIMLTASSDEADRVIGLEL
GADDYLGKPFSPRELQARIKALLRRAQFGQERGGSEVLAFDEWRLDMVSH
RLFHADGEEVILSGADFALLKLFLDHPQEILDRDTIGNATRGRDLMPLDR
IVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAANVVAGNGH
>Pfl_3137 Histidine Kinase
MTESPTLNNAEQAALIAQLQSETAALREELDETNQGVLALYAELDTQAEQ
LRQASDLKSRFLSYMSHEFRTPLGSILSINSLLADELDGPLSPEQHKQVA
FVSTAARELSDMVDDLLDLAKIEAGRISISAAWFDMFDLFAALRGMFRPI
VDATAVDLIFEEPVGLPRLYTDDKKLAQILRNFISNSLKFTTRGEVRISA
RLEGEGKVRFAVSDTGIGIAAELHGTLFEDFSQVDSPLQKRLRGTGLGLS
LCKRFAELLGGEVGVESTPGVGSSFFVIIPLALAQENVDET
>Pfl_3254 Two Component Transcriptional Regulator, LuxR family
MACRIIIADDHPLFREALLRTVQRLLPEALIEEAGDLDTVLALLPAGDEP
DTLILDLRFPGLTCVTQLAELRRCLPRTTLIVVSMVDDEALIGEVMAAGI
DGFIGKNIAPDEIGQAIRAIREGEVLVKFAPSGLLPLDTCTALTPRQQEV
LRLIAQGKTNKEIARELDISPFTVRIHVSSLLRVLNVPSRAAAAVKYSGA
G
>Pfl_2833 Periplasmic Sensor Signal Transduction Histidine Kinase
MDFKQSLTKRIVIVFASMSALVAGVFALGIVATVHVVEHKLTATTLMGGL
HRLLAMDDISRWSHRPEKSELFFFEGGPGAMALVPSLAALSPGFQEVMFE
GDGFFAMVEMVGGRKYVLLRDQESLEQRERLLFIVVAVGFILSILLAIVL
GRLLARRVMAPVIRLARQVRHRDQLLVLAPPLHPDYAADEVGELALSFDQ
TLGRLRETLSREKLFTSDVSHELRTPLMVLGGACELLLANPSLDTRSAAQ
VNRIARASHEMRQLVDTFLMLARAQEDTGGDICVSLGEVARVQAEIWGRL
IREKGLEFFCDINPAGTARYNQTFLQSVMGNLLRNAWHYTDQGFVRLTVG
ECGFVVEDSGIGIPEERRQAMFQPFVRGDERRGEGLGLGLSLVQRICNRE
HWQVDLTTREPHGCRFTVLLKTDAQDAGGQPRAVPAA
>Pfl_3943 periplasmic binding protein
MHDRYFFGEWGVLKSSPIRMAAGLMLAALAALWVLPAPAAQVVRVGAAHF
PPYTIRPENGADTGLLPELVAALNSAQSDYRFELVPTSIPRRFGDFKDGR
TDMAIFENPEWGWKDIPHTTVDMGLEDAEIFVAQNKPGRQQNYFADLKGK
RLALYSGYHYEFANFNADPKYLAETYSATLTYSHDSNLLMVLRGRADIAL
VTRSYLFDYLLRNEKVRDELLVSQRIDQIYHHYAILSPKAPITGEAFGRL
LQGLRDNGQMLKIFDPYKIAVVPVAHQ
>Pfl_3529 Response regulator receiver domain protein (CheY)
MCPISTSSAHLPGGLILVVEDDPLILEFLCEILQEEGFKVEPQTSADAAS
VYLEEHAPEVALLLTDITMPGTLNGADLANLVGERWPDKPVMVMSGYETP
ETSGVKHPVAFIKKPWAIGQLLDCVDGAFKSKAPRLH
>Pfl_0447 chemotaxis sensory transducer
MSLRNMNIAPRAFTGFALIGGLMLILGVFALNQMSKIRGAAEDISSSSVP
SIKNLDEFTQLTLRLRVLSYRLLVNREPDVQQKTMDLLDMRNQQIRKAQT
DYEPLIGSPEERAAYDQYVQLLGQYRQIEDRMKTLSRNNQVDELRNLLNT
QLLDNSEAINTVLNRLMQINGQQISETNQQAADQYSSAFNLVVTLLVIAT
GLTFLFAWLLTVSITKPIAKALDAAETIAEGNLTQPIQVDGTDEAGRLLA
AMAKMQSKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQ
AATAVNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERM
SADVQSTATLIGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAG
EAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNSTE
RAESTLNIARGAGLSLDTINTAIVEINERNLVIASAAEEQAQVAREVDRN
LVNIRDLSVQSATGANQTSAASNELSRLALDLNNMVGRFSL
>Pfl_1630 chemotaxis sensory transducer
MSIRSLNIAPRAGLGFGVLALMVFALGAFALLQMSNMRAQSDEVDNNWLP
SVMAVGEMSQDMLRLRALTMRLLLNRDPQALDQNVAKLNDLRGVLSEAQQ
RYDSLIALPEERALFDRFKVAEHKYLEFQAQVMTLSAQGRVEEAAAILNG
QMSPLADEIAVTLRELVELNKHNANLATEAARLVFTNSRVWVGVMIGITA
LITVALALLLTRSIVLPLSQSLSVAEVVAGGDLTGDISISGKDEPARLLH
ALKSMQHNLRDTIRQISESSSQLASASEELSCVTEDATRGLHQQSLEIEQ
AATAVNQMTAAVEEVASNAVATSVASRESDRIAQHGREQVQQTVSSIELL
ADDVTANAAQVEDLAQKVYSISKVLDVIRSIAEQTNLLALNAAIEAARAG
DAGRGFAVVADEVRALAHRTQQSTQEIEQMIGGIQQGTDSAVSSMQQSNV
RARSTLELAKAAGVALEEIASAFTLINERNLVIASASEEQAAVAREVDRN
LMNIRDLAMQTSAGANQTSAASQELSRLAVGLNSMVARFSV
>Pfl_1054 MCP methyltransferase, CheR-type
MSSDQRFFDFLKERIGLDVASVGPAIIERAVRQRITLSQTVNADEYWQTL
QGSRDEQQALIEAVIVPETWFFRYPESFATLGKLARKRLGELNNMRALRI
LSLPCSTGEEPYSIAMALLDAGLKPHQFKVDGMDVSPLSVDKARRALYGK
NSFRGQELDFRERHFSAENEGYRVSESVREQVRLHVGNVLDPSLLVNEPP
FDFVFCRNLLIYFDQPTQQQVFAVLKRLTHVDGVLFIGPAEGSLLGRLGM
RSIGIPQSFAFSRHSEPQPEPLPMPTAIPLPLPVRQPLRSTPPTPVRNRP
FAGVTPLPATAKSTNPDATTLLANIAALANEGKSAEARAACEQYLRSHEP
VAQVFYWLGLLSDVAGSALEAQGFYRKALYLEPQHPEALMHLAALLQAQG
DTAGARRLQERAARSGRTADSERKR
>Pfl_2909 Transcriptional Regulator, CdaR
MFELDHDLAQDIVDRAMAILPYNVNVMDSQGLILGSGEPERINTRHEGAQ
LVLANGRVVEIDAQTAVHLKGVQPGINLPLLLDQRLIGVLGITGEPEQLR
TYAELVRMTAEMLVGQRNQQSEQQWRRQRCDDLLALLLSEAGDSPRLVDE
AQQLGLKPQLTRVPYLFELGLEHGPGQTVEALSAWLMSRYPDSWCVSSAK
SSLLWCRPASQNVEHDRLLEKLDGLGWNILRIAVGGQADGLTGLRRCYRR
VGDLLAYGREVLPRSRLLTLNRYRLPVMLWRHRNDDALDELLKPLRKVIA
KDSNGQLLATLRSWCDHDGQSQACADALGIHRNSLRYRMERIAELSGVDP
LKLDGMLALYLGVQLLPQTDDLSK
>Pfl_1811 Transcriptional Regulator, Crp/Fnr family
MSEPVKLRAHNQANCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKG
EFLFRQGDTFDSVYAVRSGALKTFSLSDTGEEQLTGFHLPSELVGLSGMD
TEKHPVSAQALETTSVCEIPFERLDELALQLPQLRRQLMRVMSREIRDDQ
QMMLLLSKKTADERIATFLVNLSARFRARGFSANQFRLSMSRNEIGNYLG
LAVETVSRVFTRFQQNELIAAEGKEIHILDPIQLCALAGGSLEV
>Pfl_0930 Putative FecR
MNNTERVVPTPAQEQAAFAWLSLLHDRPSTGDQLTFSQWLHADPAHAEAY
AQAQVVWELSEGPARTLADEDALALQGLLNAMDQPRRVPVRRWAGALAMA
ACLLLMISLGTGWQPQRWIDDLGADYVSAPGEIRTVILADQSQVTLDADS
AIAVDFSHGERHVQLRRGAGFFSVTHTGDPFVVEAEKGQARVLGTQFEVR
LQPQGAQVTVLSGRVGVTPSRDGQQQVLTAGQQVAYGAGTAEKLHAVDSE
AQLAWRQGWLTYYKSTLADVVQDLRRYYPGRIVLLNDELGARKVSGSFPS
KDPQAVLNSLQGVLGLEQHQVLGKLIILR
>Pfl_0264 Putative diguanylate phosphodiesterase (EAL domain)
MTKFPSSLTSPQSGCQGCQQSEPLGFDFSFAYQPIVDLRDKSVYAYEALV
RGTAGEGALTVLDQVTEDNRYRFDQLCRTRAIEGAAGLNMQTHLSINFMP
NAVYRPELCIRSTLEAAKKHNFPVDRLIFETLESEHVDNYRHLTNILREY
REFGFKTAIDDFGAGYSGLNLLADFQPDLIKLDMALIRDIDHDRVRQAIV
RGIVTICAELGVTVIAEGIESAGERDFLADCGIFLMQGYWFARPAFKALA
QVSPEAWTR
>Pfl_4498 Two component Transcriptional regulator, Winged helix family
MRILLVEDNRDILANLADYLGLKGYTVDCAQDGLSGLHLAATEHYDLIVL
DIMLPGIDGYTLCKRLREDARRDTPVIMLTARDQLDDRLQGFKSGADDYL
VKPFALSELAARVEAVMRRTQGGGRRALQVGDLSYDLDTLEVTREGKLLK
LNPVGLKLLAVLMQKSPHVLRREILEEALWGDDCPDSDSLRSHVHQLRQV
IDKPFAKPLLHTVHGVGYRLAEGRDGV
>Pfl_5168 Putative diguanylate cyclase (GGDEF domain)
MPSLCHDGSELLPLPRSSAVRFSHFLPSLLLLLAGLAAAYVKDLNVFFTS
LFNVLPTLVLLLGGSYCAVYRRQRELFLMVTVYIAYFLLDTQTDYYRDNG
KVREDAAVVFHLVCLLLPLLFGLFAAWQERTHLFQDMIARFAVLLAFGSV
ALGLEQSYPQALLMWLSEIRWPALHGAWMSLIQLSYPVFISAFLLLAWQY
WRNPRPLHAAQLVGLLGVFWMLPKTFILPFTLNIMCSQVMLMIAAAVAHE
AYQMAFRDELTGLPGRRALNERMQRLGRNYVLAMSDVDHFKKFNDTHGHD
VGDQVLRLVASKLSKISGGGRAYRYGGEEFALVFAGKTLEECMPHLEVIR
ESIASYNIQLRNQESRPQDDQQGRQRRSGSGASSVSVTVSIGVAERLEQR
TPEEVLKSADQALYSAKGAGRNCVMAFGQNRRGAVRMDSAAG
>Pfl_3039 Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation
MKSPSLLIVEDHPFQHLYLQNLFNELGVFDLEFARDGEEALRRLKNREFD
LVLTDLLMPGMDGVQFIQGLAAQPSRPALAIMSAASRRMLMGASLVASNL
QVKVIGLISKPVNSAALRCLIDQLQALRQDVPIAAQAGIDRQSLVRALDN
GELQAWFQPKKALDNGRIVAAEALVRWAHPEHGTLLPGAFLPALIACDLE
EHLLWRVLEQAMAAQAVWRQQGYDIPVSINLPTHLLNSHDLPDRILAFVL
QHNGLPARICFELMECSVPDDISNFYAGACRLRIKGFGLSQDDFGKGYSS
YMNLVSAPFTELKIDRALVQGCNRNAELAQALTSIVTLGRQLGLTVVAEG
VETAQELALLRKIDCTQVQGFLISHAVSSEQFQQLLCHDGPANVW
>Pfl_4715 chemotaxis sensory transducer
MKFKSIQFSVAALAGAIVLSVVAALVLYALFSGARTQEMVQQRTQAQFEQ
VIEQRLTSLAQTQVSQIQRELEAPLLIAGGLVRVNALLGTPGADGQPRLN
VSREQLISLIKENVEKNPKILGTYIGWEKNALDHNDAAYVGTQVVGIDPA
NGRFLPWWFRNDDGTLGLDKLVDVDDQKVLSTGVRASEYYLCSKETKKSC
VIDPAPYKVGDKIVMLASFIEPIMLNGAFQGIVGADLSVNFIQEMLLGAN
QKLYSGAGQMALIGSNGRIVAYTKDPGKFGEKVSDILDAQQIANMANLKR
GEVTYTVNKEQGRIELYLPFGIGQTDARWTLMLQLPLDAVMADLQKLQGD
LDAQRKSDTFGMAMVGLIIAGLGLLVIWLVGHGIARPLKQMVTMLDDIAQ
GEGDLTRRLTSDRKDELGSIAKGFNTFLAKLQGMITQVVASVQSVSDSSE
HTADIAIRTNIGIQKQMAEIDQVATAVQEMTATAQDVARNATQAAQAASH
ADQAASQGMQIVRDTSNSIGVLAVEIGKAVNVVQTLAKDSENINAILIAI
RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQ
SMIQQLQQGTRDVVRVMEDSQNRTDESVQHAAKAAEALETITQAVSVIND
MNTQIASAAEEQSAVADDINRNVINIGQVANEVAGGADESSSASADLTKL
AEQQRRLINQFKV
>Pfl_3979 Histidine Kinase
MVQHPMDIKFTHRLSYKQARLTVLVGFILGTLLSLLQIGIDYASEDASIN
REILSLLEISHNPASRIAYNIDAELAQELTLGLLRSPAIISARLTDNNQT
VLASVKRPELQSGYRMISDFLFGAKRQFEDRLYLDHLPNESLGTLSLEVD
TFAFGSRFLRRAEVTLLNGFARSLILTGILLALFYVMLTKPLVRVIRELS
GRDPRSAEPTTLECPGGHANDEIGVLVKVANQQFENIATEIQQRRNAENR
LTDYLAQLEDIVSARTAELKAINARLSQSNQELEVARSTALDMAEARSAF
LANMSHEIRTPLNGLLGMIALSLDGPLNAEQQQQLSIAHDSGKVLVELLN
DILDLSKFDAGQLELEHIPFDLGSLIEDTANLLSQNAAPSVELTCLIDPH
FPALVLGDPTRVRQIVSNLLSNALKFTRFGRVDVRLSTWKDGVRIEVCDT
GIGIAQEAQVKIFQPFTQAGAGITRQYGGTGLGLALTYNLCEAMQGRLTI
SSEVGFGSQFCAELPLPCHTRAVIPPPLHGKVLAITNAVSGLAELLESLL
PVWGLTYEQRTLDDPLLGLSPDVIITDCPECLFGLRPAVTAPILLVTAYG
SFMPGEEATALAPLQQQARPLARNALYQNLRRTLQPDLTTIDRARLESVP
SQRRGRVLLVEDNPVNQLVAKGMLGKLGCDVVVAAHGVEALDQLEHDEFD
LVLMDCNMPVMDGYEASRQIRQSGRWPHLPIVALTANAMSEERERCRAAG
MSDYLAKPFRREELAALLDQWIPTTTVL
>Pfl_5551 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
MPSIDALADRLSTYLGNDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPL
AVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDGV
SKLTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVL
SGEKRRRIAKETLEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQ
AVKRARGNRKEIVNKIEESLGHCLAIDGIQGEVSGRQKHLYGIYKKMRGK
RRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKA
NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPK
GTHARARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIME
LPKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAP
GARPNPAWLNFVVTGKARTHIRHALKLQRRSESISLGERLLNKVLNGFDS
ALEQIPAERVKAMLTEYRLELIEDLLEDIGLGNRMAYVVARRLLGEGEQL
PSPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRN
ISEIRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAAD
GNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVIRITRMR
A
>Pfl_5708 Two Component Transcriptional Regulator, LuxR family
MHSTHLIVPARTAAPMTEPLPIVFVVDDDVSVRESLELLIRFSQWQPQLF
ESAQAFLGQPRSPVPSCLVLDINLPDLNGLDLQATIARRYPDTPIIFITG
YGDIPLTVRAMKAGAVEFLTKPFNDDVLLAAIANALEKSRSLLGQEDQLR
TLRTAYATLTPREQEVMTKVVAGQMNKMIACDLAISEITVKAHRGKVMRK
MKARSLAGLVKMAALLAMPLH
>Pfl_2691 PAS/PAC Sensor Hybrid Histidine Kinase
MSENKKSAAIEDMRFRLLIDAVVDYAIYMIDPEGIITSWNSGAKRFKGYE
EAEILGEHFSRFYTDEDRANGLPQRALDTAIREGRFEGEGWRVRKDGTHF
WCHVVIDPIFSPSGQLLGFAKITRDLTDRKMAEETLKQSEQQFRLLVQGV
TDYAIYMLSPEGRVTNWNPGAQRIKGYKPDEVIGQHFSMFYTPEDREAGE
PQRALETAVREGRFENKSWRLRKDGTRFLAHVVVDAIRGDTGTLLGFAKI
TRDVTEATQAQQALEKTREALFQAQKMQAIGQLSGGIAHDFNNLLTVILG
NLEIVRKRVGDDPKVSRLLENATQGALRGVSLTQRMLAFARRQELKTEPI
EIPKLVQGITGLLRSSLGPGIRIETQFPEDLQAVLADSNQLELAVLNLAT
NARDAMPEGGSVTISAEPEVVLEQNDSTLAAGRYVCLRVNDTGEGMDAET
LASATDPFFTTKGLGKGTGLGLSMVHGFIEQLGGRFILKSTQGQGTTAEL
WLPVAIDGVVAKPLGPMVSTDSVPRLSVLVVDDDSLVLTSTVLLLEDLGH
RVLSATSGAQALELFDQGEVIDLMITDMAMPQMSGAQLAHAVRLLKPDLP
IILATGYAERLEGFAAGLPRLSKPFNQLNLVEIIARSMK
>Pfl_5515 chemotaxis sensory transducer
MSQPRARIASQLGLALAVILAIVISGSTVFALRSLDTANLATREEHLASE
ARLLADQLSTFHGTLRESTQRLSGLFEKRFSAGLSIHPSEPVNVAGTQAP
GLHLGSEVLNNNFKEVDEFKQMTAGVATLFVRSGEDFIRVSTSLTKQDGT
RAIGTVLDHAHPAYAKLMAGQGYVGRALLFDRSYMTQYTPVRDSSGKVIA
VLFVGFDYTDAQNAQFDNLKRFRIGQTGSLALLDEKNQWLVAPAGVQALD
QAIPVVNDLAKAPGKGRFWSDKSEDFYSIAVPFEGGPWSVVASMPKAEIR
AVTWSVGTQLAIGSLLAMLLAVGSVVWLLRSKLAPLGDLVRQAEALGAGD
LSVRLNVSSNDEIGQLARAFNQMSQALSTMVEHIRRASEEVNRRAQALSG
LSGGAYEGMEQQSGEITSMAGAVEEFSATSLNIADNMGNTQRLAQENAQQ
TQIGRTSMEEASSSLEQIAGALNTTATVINTLGQRSQEIGGIVSVITSIA
EQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRQATDEISSMIH
SIQQETGNAISNMEQGNLLMQEGLSRNANVASALARIDEQSRSAGQQFAA
ITTATQEQSSTATLLSSNLQSIAMANSEQREVVSNLAITAKELEGLAADL
RQEVDRFR
>Pfl_4220 Periplasmic Sensor Signal Transduction Histidine Kinase
MSDLPGRHSLFWKLACLLVAFCLLMIWLSWSWGWYMEQRNQFLSDDARRT
LSRYAAEAERAWQQGERDGIDSWLQSMELREAGWVGVIGGNLQSLGSQPF
NAQELQHLTFLRGLDWPIHKRGRPWLRVPFPTDPTAGSLVIELPERFLPG
KYRVFWRVITNGVIPGLFTLLLCVGLYRLLVVPLNNLREQANAWRADELN
VRLSSGITQRPDELGELARAFDSMSERLQSTVALQQQLLRDLSHELRTPL
SRLRVASESEQQLQPLRERIGREVDVMQRLVEDTLQLAWLDTERAPLPDE
AIQIQALWEMLTENACYESCCPVGQLQCGVEASCWVRGNLNTLAQALENI
LRNAIRHSPPGGIVRLDGRREGDYWHLWLEDEGGGVADADLERIFSPFIR
LDGSRPGDDGFGLGLSIARNAVQRQGGTLWAENGPSGLRLNLRLVAEDSA
VIPEVFAGKPDPTVDMGRPQIV
>Pfl_2802 extracellular solute-binding protein, family 3
MKTPTHLTLGLALAVSCSAAFAGPTLDRVTQKGELTGVLMESYPPFSFLN
DQNQLDGFDVDVAKAVAERLGVKLKLETPSWDVIAAGRWNGRYDICVCSM
TPSKARAEVFDFPVEYYQSPAVIVVNAKDKDIATGKDLSGKKVGVISAST
YEAYLNKDLVIEGAEDKPLSYPFDNVQIAPYDNETVAFQDLALGTGVRLD
AMVTNLITARERIAQDPRFKIAGDPLYAEPNVVAVEKGDPQWNAKVTEVI
AQLKTDGTLSKISRKWIGSDISQ
>Pfl_3771 Periplasmic Sensor Signal Transduction Histidine Kinase
MRSIQRRLSLGLISVLVVVGVLLAQTSLWLFEVGLQRYLEAGLRNDSESL
LVALVRGPQGLQLDERHLSPAYQRPFSGHYFRIDFADSHWRSRSLWDQDL
PLLERSGLHSNLQLGPDGQQLLVLRSDYRRLGQSISISVAQDYTPVRESF
QRMRQIGLGLGLAGLLLILLLQRLTVRRALRPLEKAREQIAQLQQGQRSQ
LDEQVPAELEPLVAQINHLLAHTEDSLKRSRNALGNLGHALKTPLAVLLS
LASSERLDAHPELRKILKEQLEQVQQRLNRELNRARLSGDALPGALFDCD
AELPGLLSTLNMIHGEHLELSYVAPPGLQLPWDREDLLELLGNLLDNACK
WADAEVRLSVLERTDGFALSVEDDGPGIPELQRAQVFSRGTRLDEQTDGH
GLGLGIVRDIVDTWGGLLVLGESEWGGLKVVIELPKR
>Pfl_2811 TspO and MBR like proteins
MVTFLIFLIACGAAATTGMVFQPGQWYAQLNKPKFTPPNWVFPVAWTTIY
LLLAWVGYRLTMIPGSEMVLALWAAQIALNTLWTPVFFGAQRIVAAMLIL
VLLWLVVAVMVVLALRLDVITGLILFPYLAWLCVAVALNFSIMRNNRAGY
GS
>Pfl_4378 Putative FecR
MTDTHRSPSPSSAQDAASAMDQALDWLIVLGSPDEEQTRQFHAWLAADPL
NAEAFARAQAIWDGPQIAQCAQNLAAKPKKVTVLTRLRPHWKPLATAAVL
LLGLFSFSDLPMRLQADHLTVVGERQRLQLEDGSKVLLNTNSAFSSTIND
QQRVARLYQGEAFFEIPASRSQPLEIDAGPVKASVRDTAFAVRYLDGVAQ
VRVQRGDVDLRATRDDARVRLSAGESIRIGPNGFDHPAKVDAATDLAWVQ
GRLIFENCPLNQVLAELRRYYPGFIINTNEQLADVAVTGNYRLDQPLDVV
RSLAHITSAKLQEFPALVILN
>Pfl_5459 extracellular solute-binding protein, family 3
MTKRYSALLAALFAGLMLSQAPAHADGLDDVVKRGTLKVAVPQDFPPFGS
VGPDMKPRGLDIDTAKLLAEQLKVKLELTPVNSTNRIPFLTTGKVDLVIS
SLGKNPEREKVIDFSRAYAPFYLAVFGPPDAAVSTLDDLKGKTISVTRGA
IEDIELTKVAPEGVTIKRFEDNNSTIAAYLAGQVDLIASGNVVMVAISEK
NPKRVPALKVKLKDSPVYVGVNKNEPALLGKVNEILTTAKADGALEKNAQ
TWLKEPLPADL
>Pfl_2652 Histidine Kinase
MTVTVPLSERALILAPLGRDSQVALMILNEAGYGGLITPDLATLCAELEP
GAGLLLIAAEALRGPELESLLSYLDQQPAWSDLPIVLLTHHGGSGQGPSS
QLSKLLGNVTFLERPFHPVTLVSLISTALRGRRRQYEARDRLIDLSNSER
RLQSTLETLEQQVEERTAQLRHNEEALRQSQKMEAVGQLTGGIAHDFNNM
LTGIIGSLELLRRRLARGRLDDLDSLIDLGVTSANRAAGLTHRLLAFSRR
QSLDSKAVQMNDLVQSMGELLQRSLNESVQLDMRLHKELWVAEADPNQLE
SALLNLVINARDAMPDGGNLVVETGNQVLERDFTDAYSNLEPGDYVVLSV
TDNGCGMPESVINRAFDPFFTTKPIGQGTGLGLSMIYGFSKQSGGHVSID
SKIDEGTTVKLYLPRFQGESLPHAPTDMEQAPDAVEGETVLIVEDDPAVR
VLVSAVLSELGYGFVEASDADGAVPILDSEQRIDLLISDVGLPGMNGRQL
AEIGRQYRPDLKVLFITGYAEHAAVRGGFLDPGMQMITKPFTFDLLTAKV
REMIRG
>Pfl_4431 chemotaxis sensory transducer, Cache sensor
MNKNLRFSHKILLAAALIVIAAFASFTLYNDWLQRNAIREDLDNYLNEMG
EVTADNIQTWLSGRILLIENAAQNIAINPEPAAVASLLEQKALTSTFMAS
YLGDATGHFTIRPDAKMPDGFDPRVRPWYKGAESSSTSTLTEPYIDAATG
QTIISIATAAKKAGQSVGVVGGDLSLQTLINTLSARDFSGMGYAFLVSAD
GKILVHPDKALVMKSLKEAYPQDTPRISSDFSEVTVDGKTRIVNFTPIKG
LPSVNWYIGLSVDKDKAFSMLSEFRTSAVIATVIAVAIIIALLGMLIRIL
IQPLHVMTRAMEDIADGEGDLTKRLTIQNQDEFGVLGTAFNRFVERIHGS
IREVSSATGQVNEVALRVVAASNSSMYNSDQQASRTNSVAAAINQLGAAA
QEIARNAAQASTQASDARGLAEDGQQVVERSIKAMNQLSSMLSASSSNIE
SLNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADE
VRNLAHRTQESAQQVQTMIEELQVGARESVSTMSDSQRHSQDSVEIANLA
GERLNSVTQRIGEIDGMNQSVATATEEQTAVVESINVDITEINTLNQEGV
ENLQATLRACSDLEQQASRLKQLVGSFRI
>Pfl_4808 Response regulator receiver domain protein (CheY)
MPHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIV
SDLRLPGAPGTELIKLGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPF
DHDEMLQAVARILRDRQSAPAAGEAAPAKSANGSGKSAIDNSNGEIGIIG
SCPPMQDLYGKIRKVAPTDSNVLIQGESGTGKELVARALHNLSKRAKAPM
ISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIG
ELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQ
FREDLYYRLHVIALKLPALRERGADVNEIANAFLARQSARINRTDLKFAA
DAEQAIRHYSWPGNVRELENAVERAVILSESPEISADLLGIDIELGDLED
DEFIGLPAQPAGNASNSSHEPTEDLSLEDYFQHFVLEHQDHMTETELARK
LGVSRKCLWERRQRLGIPRRKTGVASES
>Pfl_1782 Protein serine/threonine phosphatases
MALQLSFAEASATGPRAENQDALRLVTPAPALAASKGFLFAIADGVSQCA
DGGLAARSTLQALALDYYATPETWSVAQALDRLLLAQNRWLQANGGGQPL
LTTVSALVLRGRRFTLAHVGDCRVYRWHAETLQRISEDHVWDQPGMQHVL
KRALGLDQHLVLDFLDGELRDGECFVLLSDGVWAALGDTAIAGILRDQPD
LHSAAQTLVNAAHLAGSQDNASALLVRVDAVGEASLGDALIHLQQWPLPT
SLKPGQVFEGWRVQEVISRSQQSLLYRVLDGQGQAWLLKTLPAQLADDAQ
AGQALLAEEWFLKRVAGRHFPEVHSAGQRQHLYYVMREYSGTTLAQLFAQ
SGPLPLAQWQDLAERLLRAVGLLHRRQILHRDIKPENLHLGDDGELRLLD
FGLAYCPGLSQDAPSTLPGTPSFIAPEAFQGTAPSTHQDLYAVGVTLYFL
LTGHFPYGEIEAFQRPRFGVPVSAGRYRPDLPEWLAQCLERGVLADPLQR
YETAEEWLLALEQGERRSLNVRPRPLLEREPLKVWRTLALLALLGNLVLL
FLLFHG
>Pfl_4029 Two component Transcriptional regulator, Winged helix family
MSQTATILVIDDEPQIRKFLRISLASQGYKVLEAGTGAEGLAQAALNKPD
LLVLDLGLPDMDGQQVLREFREWATAPVLVLSVRASEGQKVQALDGGAND
YVTKPFGIQEFLARVRALLRQAPAGEAQQAALNFGPLTVDLAYRRVLLDG
VEVGLTRKEYAVLAQLARHPGRVITQQQLLKDIWGPTHTEDSHYLRIVVG
HLRQKLADDPTRPRFIVTEAGVGYRLLDNQVPSTIEISDGI
>Pfl_1356 Predicted signal transduction protein
MSELADKVQQDLVEAIDNDDLVLPTLPEVALQIRKAAEDPDISVSDLSKV
IGRDTALSARLIKVVNSPLLRATQEVTDLHTAITRLGVNYSSNLAIGLVM
EQIFHARSDVVEQKMREVWRKSLEIAGVSYALCRRYTQLKPDQAALGGLV
HQIGVLPILTYAEDHYELLSDPVSLNHVIDHIHPLLGDKLLRVWEFPERL
VELPGLYQDLKRESQQIDYVDIVQVASLYCHKDTDHPLARIDPFSVPAFR
KLGIDPENKALCTDLEESRSMFY
>Pfl_1944 Regulator of RNA terminal phosphate cyclase
MSSKRTVAIGFIGATLDRVGKGANRWNHWRPSVGLCQQPDVLIHRLELIH
GTDARDASLAERIREDIRQVSPDTEVRLHPMALRNPWDFEEVYGALHDFT
SEYTFDTEREDYLVHITTGTHVAQICWFLLTEARYLPARLIQTSPARRKS
EEEPATGTHALIDLDLSRYDRIASRFTHKRLEGLEFLKSGIATRNTAFNR
SIEQIERVAVRSKAPMLLIGPTGAGKSFLARRIYELKRSRHQMQGRFVEV
NCATLRGDCAMSALFGHVKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
ADEQAMLLKAIEEKRFFPLGSDKEVDSDFLIIAGTHRDLRSRVAEGLFRE
DLYARINLWTFDLPGLAGRREDIEPNIDFELERHAREYGQLVRFNLEARR
RYLSFASSREAAWLGNFRELSASITRMATLADSGRIDAAQVEEEIDRLRY
AWGLAQPAGATSDLPGDAETLDLFDRLQLKAVLEVCRQADSLSDAGRRLF
GVSRQAKAQPNDADRLRKYLGRFGIEWSQLRER
>Pfl_3954 CheW protein
MAGILDTVDQRTQLVGENRLEILMFRLAGRQLFAINVFKVQEVLQLPKLT
LMPQRHPFVCGVVNLRGQTLPVIDLSQAIGMRPLVPGPNSTIIVTEYNRS
VQAFLVGGVDRIVNMNWEAILPPPTSAGRQHYLTAISKVDDQLVEIIDVE
KVLAEIVPYNAKVSRDKLDDPVLERARGREVLLVDDSNVALSQLRDTLGQ
LGVKMHIASDGLKALNMLKAWADTGVNMTDKLLMVFTDAEMPEMDGYRLT
TEIRNDPRLRGLYVVLHTSLSGSFNDSMVKKVGCDNFLSKFQPDKLVDVV
RQRLMLDEVPA
>Pfl_0657 chemotaxis sensory transducer, Cache sensor
MNIKQKLTWAFAIIACLPVVLVATLVVLNLRSDARDDFVDSSGREIRQVS
NAMQLFFDGISQNVDYLAAQPLVKNADGSVRSRMSANASDTSDGEIDKQL
FALFEGLAKSHPAYSYVSYGLNSGGYAFWPGDPKMANYDPRTRPWYKTAM
ANPGKTLRTEAYYWAGDDAVLVSTVRAVANQLGAQGGVVNIDVSLKQLTE
IVKQIKLGESGYLMLMENTGTVLVDPKQPEHNFKRLDSLGDGYAQLAKAG
KGLVDIELNGERYMANVWPSEQLGWTFIGLIKQNDVMSSATKLTWLIAII
AAVLAVFFAVVGASFASLIVRPIRSVASGLEGIAQGEGDLTKNLDIRGSD
ETAQLANWFNQFLTAIRSLIQHIGGAAGKILATSQSSTRVSGDMAEAAGR
QREAVDMVSTAFHEMVATANEVARSCSQAAESADSGQRQAREGQQQIDAA
VHSVDQLSQELEQSAQSMQQLERDSNDIQSILGTIRSIAEQTNLLALNAA
IEAARAGEQGRGFAVVADEVRALAKRTADSTAEIDGLLGNLAKRTSAVTQ
QMRASLDVSQQSVARIGEARESFGQIRESVDVIRDMNTQIATAAEEQHQV
AEDINRHISQIHGDAQLVAELANSARLDSQSLAGLSNELDGLVRRFRT
>Pfl_0354 chemotaxis sensory transducer, Cache sensor
MTRNMKFSHKILLAAALVVAVAFACFILFNDYRQREALQSSTEASMQELG
SLTTSNIQTWLESRIQLLQSMSQQVVADGNAPASLKRIIDLPAYTGNFQL
SYFGGADGVMFSVPAGNRAPDYDPRARGWYKAANAAQQTIVTEPYIAASS
GKLVITVATPVQRQGQMIGVAGADIDLSSVSAIINSLNFGGHGHAFIVSA
DGKILIHPDSKLVLKTLAEAYPNGAPNVSPGLKEVEFDGKTQLISFTRVN
GVPSADWYVALVLDKDTAFSMLSEFRTSALIAMVIAVVIIIALLGMLIRV
LMQPLLTMGRAMHDIAEGEGDLTKRLTIHGHDEFGALGLSFNRFVERIHT
SIREVSSATGQVNEVALRVVAASNSSMFNSDQQASRTNSVAAAINQLGAA
AQEIAQNAALASQHSSDARSLAEDGQQVVDKTIHAMQQLSAKISDSCGNI
ETLNSNTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVAD
EVRNLAHRTQDSAQQVQKMIEELQVGARQAVGIMTESQRESESSVGIANQ
AGERLGSVTQRIGEIDGMNQSVATATEEQTAVVESINVDINEINTLNQEG
VENLQATLRACADLEQQAARLKQLVGSFRI
>Pfl_4554 Periplasmic Sensor Signal Transduction Histidine Kinase
MMKVSRRVSLLLLGLVTVLLASILVFLYLKSSSEQTTAYTESRDLIRQIK
QQDSLWENEILKARVALSHNYDPLISPMNEMNRLWERFDTMESGHGRSDS
QQWNEAHDSFLTAMQEKTRLVEQFKSHNALLRNSLAFLPTAEDDIQAQLA
DLSDLDKIQVHNIATDTYDLLLSALEFSQVTSDDKAADIVLGLNKLAVNA
QRLPQDFQAPIRILSNHISLILREQPIVNRLLEEIEAVPVAERLDNITTM
LNQDQQQAEKIDRKYHFYLLLFSVLLMLSLLWLAIRLIRSFAEINRVNAA
LQTANDVLEQRVDERTRELKNAQSELLDAARQAGMAEIATNVLHNVGNVL
NSVNISSDLISRKLRSSKAQGLGKAMQLINEHPDDLGHFLSEDPKGKLLP
GYLNQLVGAIAQEQQEMVDELNQMNKSVDHIKDIVATQQSYAGANSMTEP
LYINELLEDALRMNAGALTRHHVTVVKEYAEVPQVMGDKHRLLLILINLI
SNAKYAMSDLSNRPRTMTLGVKIVDDSFLEISVRDDGEGIAPENMTRIFA
HGFTTRKEGHGFGLHSCALAAIEMNGHLTAHSDGPGLGALFTLQIPLITV
TENA
>Pfl_5195 Periplasmic Sensor Signal Transduction Histidine Kinase
MTLGLRIFLVYVLFIGLTGYFVLNTVMEEIRPGVRQSTEETLVDTANLMA
EILRDDFKAGTLNQNRWPQLLRAYGERQPKATIWGLAKNQVNHRIYVTDA
KGIVVLDSSGVAVGQDYSRWNDVYLTLRGEYGARSSRSDPNDPNSSVMHV
GAPIRDNGAIIGVVTVAKPNSSLQPYVDRTERRLLGYGAGLIVLGLLLGA
VLSWWLSRALHRLTVYAQAVSEGRRVAVPHYRGGELEQLATAVEQMRTQL
EGKAYVERYVHTLTHELKSPLAAIRGAAELLQDEMSADQRLRFVGNIDSE
SARMQQLIERLLDLAQVEQRQGLEERVAVPLVALVDEVLQAQTARIAGRQ
LRIERAIPADLALLGEPFLLRQALGNLLENALDFTPPKGLLRFDAERVGE
EIVFCLFNEAAAIPDYALTRLTERFYSLPRPDSGRKSTGLGLNFVEEVVK
LHGGSLRIENLAGGVQVQVHLP
>Pfl_4555 Response Regulator Receiver Signal Transduction Histidine Kinase
MSELSNRRILLIDDMPSIHEDFRKILAPAPAHSAKLDEMEAALFGVPAKP
RQAPFELDSAYGGEEGLAKLNLALQEQCPYALAFVDMRMPDGWDGARTIE
ELWKQDPQLQVVVCTAYSDYSWDELLDRLHAHDRLLILKKPFDNIEVQQM
ANTLLTKWQMTERASLQMHHLEHLVDQRTAQFRQASEALQREIDERKQLE
GQLVQSEKLASLGQLAAGVAHEINNPIGFISSNLGTLDGYFQQLLAMLGA
YHTAGQNLPAEAAAQLQQLRERLELDYLLEDIPTLIRESKEGIGRVGQIV
RDLKDFSRVDSHQEWQWANLQQGIESTLNIVAGELKYKADVVKEYQDLPD
IECLPSQINQVIMNLVVNAAQAMGPERGTITLRTGVQGETAIIEVADTGS
GIAPETLQKIFDPFFTTKPVGQGTGLGLSLSYGIVKKHGGDISVRSTLGA
GTTFRVQLPLRQTRPAA
>Pfl_0821 Two Component Transcriptional Regulator, Fis family
MSDEIQVEGEELPHLLLVDDDATFTRVMARAMARRGFRVSTAGSAEEGLT
IAQADLPDYAALDLKMDGDSGLVLLPKLLELDPEMRVVILTGYSSIATAV
EAIKRGACNYLCKPADADDVLAALLSEHADLDSLVPENPMSVDRLQWEHI
QRVLTEHEGNISATARALGMHRRTLQRKLQKRPVRR
>Pfl_0470 Lipopolysaccharide kinase
MTDFLSAEDRALLERHGLGTFDALWSKQLDAVDEPNTDGGGWSSVFRLDL
EGHGYYLKRQCNYLTRTLHAPFGEPTFAREFRNISRYNKLGIPALQAAFF
GERKVNGEVRAILLTRALDGWDDLDSLLQRWSDLDAAQQSAILKSCGLLA
RHLHGMRQVHGCFYPKHIFLRAEGDGYQAQLIDLEKTRPLLFGMRDRVKD
LEPLLRRAPEWSEAQLRELLAAYLDQSTDSSLVDSWVTRLTARRSRKETR
>Pfl_2297 Putative diguanylate cyclase (GGDEF domain)
MPGRNTQAPTPDQAPRATRKGVKAGSTFRLTVSFMLMVVVAFLAVESWRT
WRDYRSVFASARDSVTNLARATAQHAEDTIRQVDVLTAGLAERVEGDGLQ
NLDVARIHKLLVQQSKIMPQLHGLFIYGPDGHWIVTDKEVTPETANNADR
DYFQYHRTHEDRRVRIGQVVESRSTHDLIIPISRRLNNPDGSFAGVLLGT
VKVSYFVDYYGDFRIDDKGALVLAMRDGTILVRRPFITSVVGKSLANSEI
FKTYLPNANQGIVQIRAVVDDTERLYGYRALTTYPLVVEAGLSRDSIVAP
WRQDLLKNGFVLVFLILVLACFGLIVLSQLRQRMAMEREIRSAHKTMRDM
ALTDSLTGLGNRRRLDAALADEIRLARRQGSPLSLIMLDVDYFKRYNDQY
GHAAGDDCLIAVGDGIRKAVKRPSDLAVRYGGEEFTVLLPNTDSAGAIQV
AEDILQTIRSLELEHAGHPLGYVTASAGITTRYPVDDAVTPATLLKAADT
CLYQAKQQGRNRWCSAQASRQIQPIAAMPRTDR
>Pfl_2734 Two component Transcriptional regulator, Winged helix family
MENPGLVKTLLVEDDQRLAKLITKFLARHGFAVQVVRRGDQALAAIAELK
PQIVVLELLLPDQNGLHLCRRIRDGFDIPIIILTAKGDDRDQVLGLESGA
DDYVVKPVKPSVFLARLRALLRRHIPTKQPTALDILEFGQLSIDRSGRVV
SLADQRIDLTTMEFELLSLLASAAGTLFSRDEILNRIRGIPFDGINRSVD
VHISKLRGKLNDNPRNPELIKTIWGRGYLFNPFAWEA
>Pfl_3828 Response regulator receiver domain protein (CheY)
METSTTLPRKYFVVVTNSSASQRELESILSSERFNSFGTSQAQMFIEGVA
SPSSTPMLMEFTYPRGTRKHVARSIEHDTQRILATLESEWLAAQSAHSFH
NSTAMSEDPTDTSRTIESDAPCTEAWHLDNDQGALTKEGVEISLTGLETA
LVRKMLHHEDRVVSRDDLILSIGREPEQYRGLEMCLSRLQDKFKNASNGE
RLFRAVRNRGYCLIQEVVA
>Pfl_5137 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
MATYAVGDLQGCLEPLKCLLQQVAFDPALDRLWLVGDLVNRGPQSLETLR
FLYGMRESLVCVLGNHDLHLLAAAKNIERLKKSDTLREILEAPDCAELME
WLRQQKLMHYDEQREVAMVHAGIPPQWSLRKALKYAEEVETALRDDNLLP
PFLDGMYGNEPAKWDSDLKGVTRLRVITNYFTRMRFCTAEGKLDLKSKEG
LDTAPPGYKPWFQHKERKTRGLRIIFGHWAALEGNVHEPGICALDTGCVW
GGSLTLMNVDSGERLSCKCDEHGAALPTVAPLITESSPVSAPR
>Pfl_3342 UspA
MSQEPRLLLIAPPSMHHTPAFDRALALAQALQRPLHIVAFDYLQALAVVG
LFAPEQVAVARDAYLEKHRHWLEEQATRMRGHGIVVTSEVVWVQDPYAEI
LQFINEMPLVMIIRDAHEESVLKRVFFTPLDWQLLRDCPIPVHLVTNALN
PRPRHVLAIIDVLRSEDQDLVFNDQIIDAASKLAEVCNARLQLLHVYDWT
AAYAQDFGFGALPLATGIYEALGTAQHEAFAAMAERHGVSNECRHFIEGV
PVPAICRFVEEQNVDVIVAGTVQNKGMNKLLGTTAEQLLHRAPCSVLAIK
PGRGL
>Pfl_3848 Anti-Sigma-factor antagonist (STAS)
MSTGRIQFAEQDGTFVLKFVGEVRLTLCSALDATIEKIFTALNFNAIVID
LTETRSIDSTTLGLLAKLSILSRQKVGLLPTVVTTHEDITRLLQSMGFEQ
VFNIVNHPVPCPECLDDLPDQDQSEEVVRIKVLEAHKILMGLNDSNREAF
HDLVNALERH
>Pfl_2064 Lysine-arginine-ornithine-binding periplasmic protein
MKKLVMFGALALSMLSLTAVAEDAKPIRIGIEAGYPPFSMKTPDGKLAGF
DVDIGDALCEQMKVKCTWVEQEFDGLIPALKVKKIDAILSSMTITDDRKK
NVDFTIKYYHTPARFVMKAGSGVKDPLTELKGKKVGVLRASTHDRYATEV
LVPAGIELVRYGSQQEANLDMVSGRIDAMLADSVNLSDGFLKTDAGKGFE
FVGPTYEDAKYFGGGAGIAVRKGDTELAEKFNTAINEIRANGKYKQVQDK
YFDFDVYGH
>Pfl_3326 chemotaxis sensory transducer
MTRDGSLVAALPAPVVLPKNRWLTPTLQSIALMLLLAGMSLGEWPLYVSM
PLAVLIVWLPRLRSRAVPDAQPVDSSSAMSELTRDLSYTTSHNALSAAGV
AFSVKELAGKLQSQLDAAAQIVNNAEVMIATEQATSQLSREALGAASEAH
HSSAAGRTELVDSISRMHQLSQRANASRELIEALSQRSDDIQRVTLVIQS
IASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAARTATATGEVGEM
VADIQQRTAQVVEQIRQLSDDLHTGVEQVEHTGQHLENIARLAAGVESQV
GEIARGAETNREQLDSLFAAIEQMRSDLAISDQQTRRLADAAVQMEGQAE
TISERLAEVGLDDYHQRIYDLAREGASQIAARFEADVEQGRISLEDLFDR
QYQPIPDTQPAKFQTRFDRYTDQVLPAIQEPLLPRHEGLVFAIACTQQGY
VPTHNQAFSQPLTGDVQVDTVNNRTKRKFADRTGIRCGSHQQTVLLQTYT
RDTGELMHDLSVPIMVKGRHWGGLRLGYKPENPR
>Pfl_3768 chemotaxis sensory transducer
MRLSLKAKVLSLAVLPVLLFALVISLTTLFILQEQARNEVQQTRERLLGD
AKATLASYVAVAMTTIKPLYDAAAPGDADARAQVIKLLSSIKYGKDGYFF
GYDSETVRLFKANDPEGVGKSFKDNRDPNGVYVNRDLVKVAKDGTHYLQY
SSPLPGNAQVLVPKLGYTEYLAKWDMAVGTSVNLDGIEAQVAVVEAKVQE
RMQGVVLSIVGVAVVVLLVIAVAGMLLANTILRPLTLMKANLDDIAAGEG
DLTRRLTITSQDELGELAGSFNRFVDKIHGLVRQITEMTSQLTGLVTQVS
DQAQRSDQAMERQRHETDQVATAINEMSAAAQEVAKSAQNAAVAAQQTDE
EGQTAKRVVAGSIKQIHALVDDIRSSGVSLDSLQQDVSSIVGVLGVIRSI
AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQISTQEIQGMI
DRLQAGTQSAVEAMRRSSEAGDGTSAQANQAGASLDAMADLIATINSMNA
QIASAAEEQTAVAEEINRSVHQIAVAVDNVADETQLGAQTSRSLAELGQR
LGKLVGQFRI
>Pfl_5710 PAS/PAC Sensor Signal Transduction Histidine Kinase
MSNEFDRVVDALPGLAFTTREDGSVDCVNHAWCAYTGHSAHQVADAGWLS
AVHPEDLSGTINAWKNAVHSGQPYRKELRLQRADGTYRWFVSDGKPMRDD
QGMILRWWVISVDIDEQKRDKALIARTLAEVSASQDRLNTIINAIPGFVW
SATPDGSVSFVNQRWCDFTGMSLDEARGDGWVRAVHPDDAGPLAQRWGAL
LQTGEAGEYETRLRRFDGDYRWFIVRAVPQRDAWGAVTCWYGENTDIEDR
KRAEMLAASRAIEHRLSEETLSKVRSELAHLARVASLSAVTASIAHEVNQ
PLAGIITNASTCLRMLGADPPNVTGALETARRTIRDGNRAADVIYRLRAL
FSKKDITLESIDLNEAVREVIAMLLSELQRNGVTLHPELADHLPQVKADR
VHVQQVILNLILNAIEAMKTMTGRTRHLHVTTGLDEHRQVCFAVEDNGCG
FDPLDAERLFTAFYTTKTTGMGIGLSISRSIIEQHDGVLWACLNNEAGAT
FQFTLPPVTDTKEGI
>Pfl_1566 CheA Signal Transduction Histidine Kinases (STHK)
MSFGADEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHT
VKGGAGFLQLNELVECCHIAENVFDILRKGERRVDAELMDVVLEALDAVN
SMFSEVRDRSPITAATPELLAALARLAEPQSADEAPASPVAEMIEELVVE
GDSGDITDNEFEQLLDSLNAVKAEAEAPAAAAPASTGAASDEITDAEFES
LLDQLHGKGQFAADAVAPAAAAPAAPAAGDSSDITDDEFEALLDQLHGKG
NFAVDALESAIASVPAPAAPAAAAAGSDLITDHEFESLLDDLHGKGKFTD
VATGAVVTAGNASAVAAPAAKAPAAAAKPAAKTPEPKAEPAKPAAAAPAP
ARAPATPPPEKPTTEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLN
SGDESMQKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQL
KKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIESPEEREASGK
ARGGKVILAAEQEGDHILLSISDDGKGMDPNVLRAIAVKRGVMDKDAADR
LSDTECYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIYST
KGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLDLSTTNV
VDGQEVVIVRDKALPLFYLKRWLVSSAAHEEQREGHVVILSVGTQRIGFV
VDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSMLKRYA
ARRI
>Pfl_1057 Two component CheB methylesterase
MKIAIVNDMPLAVEALRRALAFEPAHQVVWVASNGAEAVRLCAENTPDLI
LMDLIMPVMDGVEATRRIMAESPCAIVIVTVDRQQNVHRVFEAMGHGALD
VVDTPAIGGGNPQEAAAPLLRKILNIGWLIGEKTARSRPAPAAPRSTASR
QRLVAIGSSAGGPAALEVLLKGLPRHFSAAIVLVQHVDQVFAAGMAEWLA
SASGLDVRLAREGEPPQAGAVLLAGTNHHIRLLKNGTLAYTAEPVNEIYR
PSIDVFFESVANYWNGDAVGVLLTGMGRDGAQGLKLMRQQGYLTIAQDQQ
SSAVYGMPKAAAAIDAAVEIRPLEKIAPRLLEIFPK
>Pfl_0460 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(s)
MKSQPDAASRMVAEVVTQLPVPSRLGMLRFERLNEASWAMLFLDPNCERQ
FGQPAVELCALVGSPYASLMEPEARYQLHDAIQQQLGQSPHYLVRYTLHT
AAGALSILELGEAYKQHNRHLLRGYLLAVDNVFDETPSLPSVDLETQNSR
LQIALELNQRAQQEQLQHLERVRAQQDLILLLARQRYSSQNSLQEAAELI
TRCACDIYEIDCASLWNLEGQKLVPISAYHRATQEYILPDVIDVSGFPDY
MDALHGSRAIDAHNAMRDPRTREMAEALRPRDVNAMLDASIRVDGQVVGV
LCLEQTGVTRAWQSDEIAFAGELADQFAQVINNHNRRTATSALHLFQRAV
EQSANAFLLVNCDGVVEYVNPSFTAITQYTTEEVHGQRLSELPALENLSE
LLFDAPSALAKSNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIG
IYEDITQTKLAQQRIERLAYTDNLTNLGNRPAFIRNLDERFARDSDTPIS
LLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLSPSGSLARFASNEF
AVLLDDTDLATGQQIANQLLATLDKPMFVDNQLISVTGSVGLACAPLHGR
DPQTLMRNAGLALHKAKANGKHQVQVFTEALNAEASYKLFVENNLRRALT
QNELDVFYQPKLCLRSGRLLGMEALLRWNHPERGMIRPDQFISVAEETGL
IIPIGKWIARQACRMSKALTAAGMGNLQVAINLSPKQFSDPDLVASIANI
LKEEALPANLLELELTEGLLLEATEDTHLQLDQLKRLGLTLAMDDFGTGY
SSLSYLKKFPIDIIKIDRSFIHEIPDNQDDMEITSAVIAMAHNLKLKVVA
EGIETAEQLAFLRRHRCDVGQGYLFDRPIPGGELIQALKRYPRGPLSL
>Pfl_1363 Anti Sigma-E protein, RseA
MSREALQESLSAVMDNEADELELRRVLNALDDVETRETWARYQIARAAMH
KDLLLPRLDLAAAVSAALEDEATPAKVSRGPWRSLGRLAVAASVTVAVLA
GVRLYNQDEIAGVELAQQSNQPVLATPQVKGPAVLAGYNESSEATGPMAN
GVLQGQPGWHDQRLPGYLRQHAQQAALKGTESALPYARAASLENR
>Pfl_0450 chemotaxis sensory transducer
MQFWRRSIQWQLILGMGTALLVSILIVVGIYTLVVNRLAQSYLVEQALPS
SIEATRNDIERILVQPLTAAKDIASNTMVRDWLANGEDSAKTAGFAQYLE
GIRAEHKAFTALIIGTESNHYITEKGLDRTLSRDKPADAWFYSFLDSNQP
RTLNIDNDGATGELALFIDLKVEQAGKVVGVAGLGLSMKELSELIHNFSF
GERGKVYLVRSDGLIQVHPEAQFSGKRTLSEQIGVSAAQAVMGHKVAANS
SFQRDGEDFLAFSLPLRDLGWTLVAEVPRSQIYAEARRAMWMSSGIGLVV
ALVCLALVIWLAQGLVRPIRQVTAALVAIGSGGGDLTHRLDSSRADELGD
LARGFNRFLDSQRGMIGEVLTTSVRLRVAVGQVARVVDNTAERSGRQQEM
TDMVATAVHEMGLTVQEIAQNAGNAALASQTARDEAMQAREVVGGSIRHI
ESMSDEIGVAAGAVGELAHQVASIDQVLAVIRGVSEQTNLLALNAAIEAA
RAGDMGRGFAVVADEVRTLARRTQASTDEIQQMIGSLKQGAENAVSSMRT
GQAATGTGVESSQRTGASLTAITGQVERISDMNHQVATATEEQSAVTEEI
NRNVQGISDLARATAGEVRACREDCQMLQRLADDLARQMGGFKLS
>Pfl_4833 chemotaxis sensory transducer
MLLRQLNIAPRAALGFALIAVLVALLGVFALGQMSSIRDSEVAVETQWLP
SIRGGDEIREIMLRIRTISLRMALDQDPANIATYRSQMDTRDRELSEKIA
AYDRLVTTPEGQQLYDQFKKTFAAYRTGIAQSFTLAEQGKRDELTKLLLV
DMKTVVDGSGKQLNDLADLFARQVAAESQNSAAHYETSRTIVSLFIALAA
LATVALAMLLTRSIVRPLSAAVDAAEHVARGDLTRPIETHGNDEVSRLLK
ALATMQQNLRETLQGISGSATQLATASDELSAVTHDSTQGLQQQNNEIEQ
AATAVNEMTTAVEEVARNAVSTSDATRQSSESAQLGQERVSETAGAINAL
ASEVEHTGELVQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAG
ESGRGFAVVADEVRALAYRTQQSTQEIEQMVQGMRNGSSLALESMQASAS
RAATTLVLAERAGEALQTITASVNEIHERNLVIASAAEEQAQVAREVDRN
LVNIRDLSVRSAAGADQTNASSHELSQLANALQGMVRRFQL
>Pfl_4030 Osmosensitive K+ channel Signal Transduction Histidine Kinase
MSDSGRADALLAELPRDGRGRLKVFLGAAPGVGKTYAMLQAAHSQLRQGV
KVIAGVVETHGRAETEALLGGLPQLPLVRSEYRGVTLEEMDLDGLLAARP
KLVLVDELAHSNAPGSRHAKRWQDIQELLAAGIDVYTTVNVQHLESLNDQ
VRGITGVQVRETLPDWVLQEAYELLLIDLPPRELLERLREGKVYVPEQAR
AAIDAFFTQTNLTALRELAMQTAAAQVDNDLAQGYRQLGQAAPAVRGRLL
VGVDGDAQAERLVRHASRVAQRRHLPWSLVHVDNGSVRDEQSRLRLQSAQ
QLAERLGGEVVLLRAGEVAKTLIQHAAERRASLVLVGQSRPRLRRRLFGG
GLAARLLRQAHGLEINVLDSDQEQHQPRPRSAPTLVWFDYALALVATVLA
SALAWAVSSVLPLPNISLVFLAAVLLVAVRSSLGPALACAALSFLTYDFL
FIPPNFSFSIQREEDVLTLLFFLLMAALTGNLAARQRRQLQALRDTQEET
TELLDLSRKLTAATDRQAVVSAAAQHLNGWSDLQLCLLNRDGQGGWKVET
GGPLQFTESERAAADWAWQHDQPAGMGTGTLPFGRWWWWPLSVEDGPLAL
LGVCAKEGQTLSGQRRRLLTALSQPLAQALARAQLADDLEAARLHGETEQ
LRSALLASVSHDLRTPLTSMRGSIDSLLALGEAIPLEDRRELLEGTRDEA
ERLDRYIQNLLDMTRLGHGALKLARDWVSPADIVGSALNRLRAVLSSLQV
STDVPAELPLLYVHAALIEQALVNVLENAARFSPSHGRLQLRAGADDSEV
FFSVSDEGPGIPVDERAKIFDMFYTAARGDRGGQGTGLGLAICQGMVGAH
GGRISVGDGIDGRGTCITLHLPLQTQPGMDDEA
>Pfl_4273 Carbon storage regulator, CsrA
MLILTRRCAESLIIGDGEITVTVLGVKGNQVRIGVNAPKEVAVHREEIYL
RIKKEKDEEPSH
>Pfl_1564 Response regulator receiver domain protein (CheY)
MNKDMKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTAIPVLNSGSI
DFLVTDWNMPGMTGIDLLRHVRADEKLKHLPVLMVTAEAKREQIIEAAQA
GVNGYVVKPFTAQALKEKIEKIFERIG
>Pfl_3624 Two component Heavy metal response Transcriptional regulator, Winged helix family
MRILVVEDELKAAEYLHQGLTESGYIVDHAVNGADGLHLAQQQVYDLIIL
DVNLPELDGWSVLEQLRRTHSTRVMMLTARGRLADKIRGLDLGADDYLVK
PFEFPELLARVRTLMRRSENIPVPQVLKVADLELDPGRHRAFRGTQRIDL
TTKEFALLHLLMRQSGEVLTRTQIISLVWDMNFDCDTNVVEVSIRRLRAK
IDDPFDSKLIHTLRGVGYVLEARE
>Pfl_3067 Two Component Transcriptional Regulator, LuxR family
MVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLIKARELKPDVVLMDV
KMPGIGGLEATRKLLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYLTKG
AGLPEMVQAIRLVFAGQRYISPQIAQQLAIKSFQPTNDSPFDALSEREIQ
IALMIVGCQKVQIISDKLCLSPKTVNTYRYRIFEKLSISSDVELTLLAVR
HGMVDASL
>Pfl_4253 CheW protein
MAGVMDSVNQRTQLVGQNRLELLLFRLDGQQLYGINVFKVREVLQCPQLT
LMPKSSPVVCGVANIRGATIPILDLAMATGSGALKDKNSPFVIITEYNTK
TQGFLVRSVERIVNMNWEEIHPPPKGTGRDHYLTAVTRVDNQLVEIIDVE
KVLAEVAPTPEAISVGVVDVETQSKALSLRVLTVDDSSVARKQVTRCLQT
VGVEVVALNDGRQALDYLRKLVDEGKKPEEEFLMMISDIEMPEMDGYTLT
AEIRSDPRMQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDLASRV
VDRIKAADIS
>Pfl_3092 extracellular solute-binding protein, family 3
MHRRPSLFKACVFVLAASSAVMGIAQAADSKLDSVLARGKLIVGTGSTNA
PWHFQGADGKLQGFDIDIARMVAKGLFNDPSKVEFVVQSSDARIPNLLTD
KVDMSCQFITVTASRAQQVAFTLPYYREGVGLLLPNNSKYKEIEDLQAGG
DGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAVNSGRADAAATD
QSSVKYLMVQNPGRYRSPTYAWSPQTYACAVKRGDQDWLNFVNTALHEAM
TGVEFPTYAASFKQWFGVDLPSPAIGFPVEFK
>Pfl_3660 Putative prophage repressor
MCFVGRRRPRMVPHMDKWIELVKAKMSELNVTQVELGERVGMSQGGIGHW
LNKRREPGITQMNRVLKALGMEYLEVAVVIREPQIDADDEMPLAQKYNPY
FRYPVSEWNAPIEARESQPAYSSAKDKRRFELTDYHARGPAFWLTVMGNA
MTAPTGQSIGEGMMILVDPALEAEPGKLVIAQWPDSDEAIFRKLIEEGGQ
RYLAPLNPTWPKALLTDECRIIGVVVQATAKY
>Pfl_5518 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MTTPVEPLRLLLLAEEPAWTALLRECLAPLGSAAVLISAPSWESVSSLFE
ENRHAVLLTVPALQPAPGRCSLPTVLLLEHEPATAPDGVSDWLVFDALDT
DMLRRCLRHVRERGVLENTLQRLAEQDPLTGIANRQGFQTLLTARLAEND
GRGLALGHLDLDNFRHANDALGHQAGDRLILQVVARLKSQLEIGDQLARL
GSDEFALLIDTRRAPQRAEWMAERITEALAEPYWVDGESLLIGSSLGIAH
ARAQGGADPLMWHAHIAMQQAKSTQGCTFHIFNERINRNARSMADLESEL
RRALRRDELELHYQPRLNLQDGQIVGLEALVRWRHSERGLLPPSEFVPLA
EQSGLIVPLGYWVISRALRDMQALRERGLPALHMAINLSFRQFQDSQLLP
TLSRLIAERGVEAQWLEFELTETAVMRRSDLVKQTMDALGRLGVRFSLDD
FGTGFSSFVHLNSLPITLLKIDKSFVGGMEQREENRKLVHAMINLAHNLH
LEVVAEGVETREQLDLLRGFGCDQVQGYLISKPLPLAELVEYLVVDASQP
PLGIVV
>Pfl_0189 Predicted signal transduction protein
MTAVDLPAVPRVLIAEADPWSRDLLKQVLLNVRCDARLDLCADGQEAMTL
LSEVPYDLAIVDWELPGVDGLSVLRSVRQRKRNPPLPFILMSSRNDSASV
REALPLAPTAYLAKPLNMESLTERLQGLLLNAGEEVFCEVPALAPGMTLS
VFLERRREQADGAPLMTDVQVAVKRSLNPNGLDLKLLEEEIRTDPQITAV
LIAAANSAAQHHGAPVQTLAQALHRLGTGQSMNLILGLALKRSARLSDPC
LADYAERYWGLSLHTAEYARTLARLLDLDQERCYCAGMLHRLGDLALLRC
LQEWKQAGGELDELEEVGDALAEFGAAYGSALRTRWRLPLELRELIASVY
QLGGGVYSREALVMNMAAQMARLTEHEGVEELAKSRTARLLKIGLPELMR
MRK
>Pfl_3797 Putative FecR
MSSSMINPQILGEAADWLVQLHSGTATPSDHQAIAQWRSRSAEHAMAWQR
AEALLGDLRSVPANVAIQTLKRASRKEGLSRRQTLTRLGLLLMAGPLGIA
SQHVPWQQWAADQRTAVGEQKNLQLPDGTQLVLNTDSAVDITFSPIERRV
LLLNGEVLINTAADASARPFIVETPQGVARALGTRFCVRTEGSRSLVSVL
EGQVQITPQLLKQSAILQAGERQRFKLNSFDSSETFDTASLAWDKGMLLA
SNMRLDELLGELSRYRRGVLRCHPDVAAMRVSGAFSLRDTDASLRLLSDT
LPLNINSLTRYWLSVEPRV
>Pfl_4199 Predicted signal transduction protein containing EFhand domain
MIGSVSNYTSYTSSTSTQNARSQQLQKELFAKLDSNGDGAVDQDELGSAL
SQKSNDGLLVSLSKQFGDLDSDASGSLSAEEMTAMAPPPPPPGDQAPNTE
LADALISALDADGDGAISSDELSNGLTSAGSTADSSKIFSALDKNEDGVV
SQDELAASLAPPPPPPQATSDELFSQLDADGDGSVIATELNSALQASDST
SSNNTDNAAALLKVLDSDSSAGVSSDELKAALHAGRERPDDERTASNTQT
TTEALNRMIANLSKQYSLENTASVGKYLNVAT
>Pfl_3676 Serine/Threonine protein kinase
MHTLAQLRAGELSRITRLDLAEGLTEFPPEIFNLADTLEVLNLSGNALSS
LPDDLHRLTRLRVLFCSDNQFTQLPACLGQCQALTMIGFKANRITQVPGA
ALPPNLRWLILTDNAIETLPTELGERPLLQKLMLAGNRLNTLPPSLSQCH
RLELIRIAANQLTELPQWLLTLPSLTWLAYAGNPLETEADAAALDKAPLI
DWSALQLEQPLGEGASGVIYRAQWQPANQPATSVAVKLYKGEMTSDGSPL
HEMNACITAGLHPNLIRVEGRIDQHPDGQQGLVMQLIDPSYRNLAGLPSL
ASCSRDVYADDCRFSADVALRIARGIASVAGHLHRRGITHGDLYGHNILL
NDQGDCLLGDFGAASFHAMADTPETRALQRLEVRAFGILLGELLTRIDSG
LSDEQRQVLEALEQRCCQPDVLARPGFGEISQALQHA
>Pfl_3380 Heavy Metal Sensor Signal Transduction Histidine Kinases (STHK)
MKIAGTYSLTLRLALVFAVLAFAALGGLGAALYNQLEAALIRRDDIQLVS
RVDQLRTFLNDSNTLELIKNKPALFQNMLGNREALLTIGAPGQPPLLVVN
PGNLATPNLPAVPIDHPMALSDVQHLPSVDGVPFSAVAATIDSGDLGNLQ
VLTGRLMTERTAMLANYRLSVYGLASLAAIVLALVGCLLVYRGLLPLRRM
ARHAHGIGIANLGERLDRQGTPRELQPMIEAFNAMLDRLDRGVAQLSQVS
TDMAHELRTPINNLLGETQVALQQNRSVDAYQQLLASNVEELERLARMLD
NMLFLARTDPASALSQRQELDASDEMQRIADYFEGLAADVGVTIEASGSG
VIWAEPMLLRRALANLCANAIKYGAADSTLQVEAIAETDGSYLRVRNQGT
TIPAEHLSRLFERFYRVDPSRERSAQSNGLGLSIVATIMQLHQGRYSVSS
ADGITCFELFFPARETRDAGA
>Pfl_4539 Periplasmic Sensor Signal Transduction Histidine Kinase
MKCDPTLYRATPPSLAVKPRLIRHLFLPPLVIALMIGLGYIGFWTSEHFG
IRSLGENGQRQLELHARAVESEISKYTYLPSLLELESSVSLLLDDPTPEH
RQTVNDYLEGLNRRSRSRAIYVMDTTGRVMATSNWRDVDSYLGEDLSFRA
YFQNAIRGQPGRFYGIGSTNGEPGYYLAHGLEEHGKIIGVAVVKVRLEAL
EERWQRARLEAFVSDENGIIILSSDPARRLKSVIPLSDETKEKLARSLQY
YWFPLNELQPLARETLSEGVEKLTFPANSEVPSQQDGDEENISYLAQTRP
LSDTPWNFTLLTPLQDLRREAINQGILVAVAFALVAFLLIAWNERRKVIA
TRLAAREALQEANNQLERRITERTADLRASNDRLKSQIRERRQAEETLRR
AQDELVQAGKLAAIGQMSTSIAHELNQPLAAMRTLSGNTIRFLERGQLDV
ASTNLKTINDLIDRMGRITASLRSFARRGDDKGRASLGKAVDAALQVLGA
RVESASLQLHRQFDDVQVQIDQTRLEQILVNLIGNALDAMQAQPLPELWL
EGEEFNGKYRLRVRDNGHGIDAEARKHLFEPFFTTKPGEQGLGLGLTLSA
SLAAATGGHLGVEHPASGGTTFVLSLPLVSPTPAEPI
>Pfl_0311 extracellular solute-binding protein, family 3
MQNYKKVFLAAAVTLAFSAGAMAETLKMGIEAAYPPFNNKDASGNVVGFD
KDIGDALCAKMKVECSVVTSDWDGIIPALNAKKFDFLISSMSITDERKGA
VDFTDPYYSNKLQFIAPKDKEFKTDKDSLKGKVIGAQRATLAGTFMEDNM
PGVEVKLYDTQENAYLDLISGRLDGILADKYVNYEWLKSDAGKAYEFKGD
PVEESDKIGIAVRKGDPIREKLNAALKEIVADGTYKKINDKYFPFSIY
>Pfl_2249 Two Component Transcriptional Regulator, LuxR family
MSEVTPVVFVVDDDISVRESLELMIRFAGWQPRLFESAQDFLDAPRALVP
SCLVLDINLPDLSGLDLQTALADERYNMPIIFITGYGDIPRTVRALKAGA
VEFLTKPFNDDVILSAMADALQSSRVALEGEKNLRALLEAYKTLTPREQE
IMASVVSGRLNKLIAADLNISEITVKAHRGKVMRKMKARSLADLVKMAAL
ITPE
>Pfl_3345 Transcriptional Regulator, Crp/Fnr family
MAETRSYRDQYLKTACSRCSVLELCLPLGLNGGEIERLDTLIAQRLKVKK
GAALYRAGDPLRSLYAVRLGSFKTSVLSIDGREQVTGFQIAGEMLGLDAI
SSDLHTCDAFALEDSEVCPIPFGQLEKLARELPSLQHNLNRILSREIVRD
HDMLMILGNMSSDERLAAFLLNLSQRLSARGYSSRSFVLKMRREEIGSYL
GLRLETICRGIAHLRDQKLVEITGRDVTIQNMDGLKQLIVGCHRHPQ
>Pfl_4625 Histidine Kinase
MKELLDELPFEIAARLPIQLGRQSISSSMVAISELIKNSYDADSKKVKLT
FTNSKDNLPSLIIEDDGEGMSYEDVKENWLIIGTSHKTHQDISEKYRVYT
GAKGLGRLGADRLCKTLVLQTKQESDQAALELQIEWEAYENAEKPLSQIK
HKLYKHTSQIQDRHGKFPDNEKNSGTRVILQGLKDDWNLNLLTDLKKELS
LLISPFDETNDFSISIQSDFPEVNGNVSSSSAVEYARWVVDAELDGEIIN
ANFRYSDGREFKINSEEWKNWIKDRPPVPSSGPLKLKMYFIPWDAPGLKN
VDFTKRNWREFMNANQGIRIYRDRFRVRPYGEPTGKGDWLDLGIRRARSP
GGVKQGGWKVGPHQVIGAVFIGRKTNPLLEDQTNREGIVESEAFYDMRAF
CVKIIDRFELYAHQIAREEDDGSDTEEKKLLAKKAIADTTKEVEKLKESI
SKNLQETVDTGEQKDISANEPETLMVRIAEVESRLAEAAARSSELEIHLE
KKAEELEHEKDTLANLASLGILTVCFGHEAKEFTNLSLVNAKNLKDSFEK
GIFMLTPPYDEEFSNCLKTIISSTGFVRNFASFALGNIKPDKRKRRAVDI
GDVASGVFKALSASLERQNIETSVTCETKRKIIAFEIDLESIFVNLISNS
IWALKKTAVGERFISVNIHEKNDHITVSFADSGFGLESGTEEQIFQPMYS
TRLDRKGSVEGTGMGLSIVKSFVDNHTGGNISAISKGRLGGAEFLINIPL
NTNNKA
>Pfl_5184 Response regulator receiver domain protein (CheY)
MSDHDILSDAEREALSAVMLEPDLPPQRVLIVDDDKDARELLSEILALDG
IRCLTAASGETALKMLAEKPSIGLVITDLRMGNVDGLELIRQVRESVRAA
LPIIIVSGDADVKDAIAAMHLSVVDFLLKPIDTAKLLGLVRHELGIEP
>Pfl_2216 Transcriptional Regulator, LuxR family
MKHMNSHLFPQIGKVIASTGSRHFPRMLHDLILTQLAVDATHIRQMRVEP
VGRAQPRSEPECPKEATLTAETVYSELSTDPGSSDVPAPEPSTVTDASQL
HLTRRKDGYSYVISVYRCGPSKRFSARERSLLQDISPVLLPMVEKHIHAL
QPANADPEAQAAATEASLQGLETLRLRFCERVQQLGLSLSNREMEVCVGL
LAGRTAPELAERLQLKVNTVESYLKRAAIKLGISGRHSLMRWMYSPEDCP
AACDPSNAA
>Pfl_2100 chemotaxis sensory transducer
MSIKLRLVLLIATSLLTALIVSLVSYVGNQRMASAVSDNAVSMSALRNHM
EADMMHDALRADVYSAMLVGLSKSTSSADEVRSSVEEHAAHFREVLGENL
KLPVNPTIKSALEQIKPSLDTYISAGEQIVGLALENPESAQQHLGTFSTA
FSQLEEQMAALSELIETNTRQTSEGTEAAIHNANVALGIVLFASLLLLLF
QGRWVILSIMGPLKSASRIAESIAHGNLSEPIAEPSGKDEASALIRTLAT
MQRDLRDMIGVVRSNAHGVSGMSEQLSHGCHQVADSSQQQSTAAGTMAAA
ASQMTASIEEITRHAERALNMASQAESLAKNGGQVIHQVVSDMDDIARSA
QQSAQVIRTLDQESEGIFNIIQVIKSIADQTNLLALNAAIEAARAGEQGR
GFAVVADEVRNLAARTSASTQEIAAMVARIQNSTREAVSSMEAGVAQVDK
GMAVTADVERAIREILEATLSTTQLVNDITRTIGEQSQASNEIAHQVEMI
AGMSEGNSKVIGETANTTDELSSLAGRLAQSVDRFRL
>Pfl_4206 Possible Phosphohistidine Phosphatase, SixA
MKLWVLRHGEAEPYGSRPDSERELTAHGRQEVLSSAARLMGQPLTAIYAS
PYLRAQQTAQLVREALGFEPEIRTVEWLTPEVDPDRVAEQLVSVSNVLLV
SHNPLVGNLLSYLQHGAGYPPEKVSTAGLAELEHSELLIGSMTLNSLKHP
>Pfl_0963 PhoH-like protein
MDDHGRSPSSNQPILYVLDTNVLIHDPNALLNFEEHHVAIPMTVLEELDK
LKSGHHSVAAECRQAIRLIDKTLGDASPDDVEQGVPIQRGKGGPKGLLSI
LMSKQAESNLILPEHLNDNKIINQLIDLHTREPSKPVVLVTKDINMRLKA
RACGIDAEDYSTDQLVDDVSLLPNGYHNMTGSFWDRVSKVETRQDHGRTW
HQVQLIDNLPAVHINEFIIDEQGFVGWIKEIEEDKLLILDLHQEPLLHQE
AWGLKPRDIYQSLALYALLDPDIHLVNLSGAAGSGKTILALAAAIEQTMV
SKRYRRIIATRSVQGLDQEIGFLPGTEAEKMEPWLGAITDNLEALHMDDE
NTHGSVDYILSKVPLQFKSLNYIRGRSFQQSLILIDECQNLTPHQMKTII
TRAGAGSKVVCLGNLAQIDTPYLSATSSGLTYLTERFKDFPNGVHITLQG
VPRSILAEYAESHL
>Pfl_5196 Two component Transcriptional regulator, Winged helix family
MPHILIVEDEAAIADTLIFALQGEGFTTTWLSLGAAALEHQRQTPADLII
LDIGLPDISGFETCKQLRRFSEVPVLFLSARNAEIDRVVGLEIGADDYVV
KPFSPREVAARVRAILKRMAPRPVIEASSALFRIDPERVQISYRGQPLSL
TRHEFRLLQCLLEQPERVFSREQLLDALGVAADAGYERSIDSHIKSVRAK
LRLVRAEAEPIQTHRGLGYSYSPGNS
>Pfl_4550 Response regulator receiver domain protein (CheY)
MEEPSAPISPPRPKVLLVDDEEPILNSLRRLLRGQPYDVLLATSGAQALE
ILEQQPVNLVMSDARMPNMDGATLLARVHELYPATARIMLTGYAEPSAII
KAINEGQIERYISKPWNDEEMLLTLRQALEHQHLARERERLEQLTRAQND
QLKLLNSTLEKRVAARTAELQQTADMLDLAYEELKRSFLTGTEMFSLLAN
LRLPPTKQTNRQIIELVRCYCREHRFDEAASRDLTMAAALYNIGKLSWTD
SMMTTPSDLLHSTERDRYRAYPKQSESLLMTLDPMKDAARLILHHQEHWD
GTGFPDRLKGEAIPLGSRLLKLAVDFVELQRGLILERQMNSDEALLYLRQ
YAGKVYDPELIEDFVKVCATVSDITLIDPSVRVLGTRELAAGMILARNLN
ADNGMLLLNAGKVLSALLVDKLISFEAMEGAKYKVFVKVPEEGESVLLAQ
G
>Pfl_1336 Putative diguanylate cyclase (GGDEF domain)
MPLRSAFHSQRSLVLTLVALLGAGFLATSLLSYYASRASIRDNIVNTELP
LTSDTVYSEIQKDLVRPILISSMMSRDTFMRDWVVNGEKDSDQMTRYLDE
VMTHYGAYTAFFVSNSTHTYYHAKGVLKQVKIDEPRDAWYFRVRDMKDPY
EINVDPDLANKDNMTFFINYKVYDYNNRFIGAAGVGLTVDAVIKLIDKYQ
QRYQRSVYFVDTFGRLVLTGAEGGPEGARVGKSLTDLDSMKSLVSQLPKP
HSGSYEYSTHGQGHFLNVRFIPELNWYLFVDKREDGALSEIRQSLYLNLL
ICLLVTLIVLALVNRLIRRYQEKIHAQATLDSLTELPNRRGFDLLAAQAL
HEAHREPKPLTALLLDLDHFKVLNDTYGHMAGDQVLIGFARDLQSCLRHS
DIVCRWGGEEFIVLLKDTDGETGQKIAEKIRQHVEQHEYAYNGHTLNLTV
SIGATTLQPDDTLHSLLSRADHAMYRAKQTGRNRTCVEMPHSTYA
>Pfl_2452 Response regulator receiver domain protein (CheY)
MAGVLDGLPEISPGKAMSHTAVVSVVDDDESVRMALDSLLRSHGYTVQLY
PNAEAFLAMKAPPRPGCIISDIQMPGLSGIEMYDELCARGVRIPIIFITG
YQGRPPRVNAAFPEPLAYFPKPFPCGELITCIESAFNRAV
>Pfl_1542 Response regulator receiver domain protein (CheY)
MQPQEPLTILIAEDSAADRLLLSTIVRRQGHEVLTATHGAEAVEAFIRQK
PHLVLMDAMMPVMDGFEAARQIKKLAGENLVPIIFLTSLTESEALARCLE
AGGDDFLAKPYNQVILAAKIKAMDRLRRLQATVLQQRDLIAKHHDYLLNE
QRVAKAVFDKVAHSGCLSAPNIRYLQSPYALFNGDLLLAAYTPAGDMHVL
LGDFTGHGLPAAVGAMPLAEVFYGMTAKGYGLAETLREMNAKLKRILPVD
MFCCATLLCLSFQRRSVEVWNGGMPDGYLHCLATGERKPLAARHLPLGVL
SPQTFDDRTEVHSMAVGDRVFLLSDGVIDTCDANDQLFGVERLHKVFAAN
RQPDRLFEDIEQALQDFRGEARDDVSMVEVSLLEAEQVNPPAPVYSDSGQ
SCPLDWSVSFEFRGATLKRFNPLPYLLQLLLEVHGLRAQSGALYSVLAEL
YSNALEHGVLGLDSSLKRDASGFARYYEQRNARLEALQDGYVRVHLQVRP
EGEGGCLVVRVEDSGQGFDVSRVMERPLDGVRLSGRGVSLIRQLARNASW
SDDGRSARVEFFWEALA
>Pfl_2525 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MLIGSYSFTLVFISLCVAILASYTALDLTGRIATAKGRAVHLWTAGGAFA
MGIGVWSMHFIGMLAFKLPISLGYDISITALSLLIAVLSCGFALWLVSQP
KLPAWQLAFGALIMGAGISAMHYTGMAAMRMQPGIDYDPTLFGASLLIAV
GASAAALWIAFRLRQHSPYVRLFRAGAAIVMGVAIVGMHYTGMAAARFPD
GSFCGAALSGLNGNGLDNLVLITTLAVLAIALLTSILDARLEARTADLAH
SLTVANRELTQLALHDPLTGLPNRMLLDDRINQAMKKVNEQGGCFALMFI
DLDGFKPVNDAFGHHMGDQLLREVAVRLREDLRSLDTLARIGGDEFVLLV
RLAEPNDALGLAARQVGLIAQSFRVAEHDLQISASVGIALYPGNGESAQE
LLMNADAAMYHAKGGGKNGYSFFDVSMNSNARKQLQLLQDLRAALEHSEF
CLHYQPKFHAADGHPVGAEALLRWEHPVHGMLMPDTFIDLAEKTGLIIPI
GEWVLNEACRQMREWYVLGHTEWRIAVNLSALQFCHAGLVRSVAKALATH
HLPANSLTLEITETTAMSDADASMTVLQELSDMGVDLSIDDFGTGYSSLM
YLKRLPANELKIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVE
TDSQQDFLTQLGCDSLQGYLLGHPMPADRFLQNVARGKPLAVS
>Pfl_1863 Two Component Transcriptional Regulator, LuxR family
MGSALIVDDHPVVVGALRLVLESAGYTPIHVTGRGVDVVPMLREHAPKLV
VLDLKLDGFGGLEVLARIRAVGLVCNVVIFTSADPEHYLMRCRRAGAMAF
VAKSASMQHLQNAIKAVRSGYTYFPEMPVVNTGQSEAHRDERELIALLST
REMEIMLKLARGESNKHIALAMNLSHKTISTYKTRLMLKLGVSSLVVLRE
FVKRNGLLP
>Pfl_2000 Periplasmic Sensor Signal Transduction Histidine Kinase
MNMQSQSLPVEEGSQRLNSRKQPFNLLRWFSLISMAVIGTVAVALGAVST
RFVIEESVQRDALLTAQFIQAIASAEVRHVSIPNIRTMGELLDPRQDNDF
PDVDPQARASARGEFLDHIEHLPDVILANVYAPDRTVIWSTNPALVNTRI
HADEDLDRAFDQRIPVSASYHNVDKGREEQKFVVPPEYIFIENYIPLFDA
EGKNVTAMVEIYKEPKDLIARMERGLALIWLATALGGGLIYLGLYWIVRR
AAILLAAQQKQLIANETFVALGEMSSAVAHSLRNPLATIRSSAELALEFD
AGPAQKNIKDIIGQVDRMSKWVRELLQSLRPLNDDPEPVNLVAALHDSLM
AFEQQIAKAGVNVVFQPQQTPMVLSHPVQLTQILNSLLANALEAMDKGGT
LTITLEPSDSRGVSVMLSDTGKGMSEEQRSMAFRPFFTTKQGGLGVGLVL
VKRIMERFGGGVSLDSREGKGTTVRLAFQLIQ
>Pfl_2086 Two component Transcriptional regulator, Winged helix family
MEHVDHILIVDDDREIRELVGNYLKKNGLRTTVVADGRQMRSFLEANTVD
LIVLDIMMPGDDGLLLCRELRSGKHKATPILMLTARNDETDRILGLEMGA
DDYLTKPFAARELLARINAVLRRTRMLPPNLVVTESGRLLAFGRWQLDTS
ARHLLDKDGTMVALSGAEYRLLRVFLDHPQRVLSRDQLLNLTQGRDADLF
DRSIDLLVSRLRQRLLDDAREPAYIKTVRSEGYVFSLPVEVLGAPA
>Pfl_1483 Two component Transcriptional regulator, Winged helix family
MSELLLIDDDQELCELLSSWLSQEGFQVRACHDGQSARKALAETAPAAVV
LDVMLPDGSGLELLKQLRSDHADLPVLMLSARGEPLDRILGLELGADDYL
AKPCDPRELTARLRAVLRRSHPAAVSTQLELGDLSFSPVRGVVSIDEKEF
TLTVSESRLLEALLKQPGEPLDKQELAQIALGRKLTLYDRSLDMHVSNLR
KKIGPHPDGRPRIVALRSRGYYYSL
>Pfl_1804 conserved hypothetical protein
MRWAVGAILGISLSAMASQPPLRFVIADSWAMPMVQIERGRPTQGILYDM
MLSLATQVGIPAQFHVLPRARVQNAMEHGEVDVRCYAAQSWLPNQSGDYI
WSIPLLFQRDLLISRQDQPPSADPAHLPRQSIGTVLGYSYPTLQPIFDAD
RLWREDARNQEQVLDKLLAGRYRYAVSNQWALDWFNQRLLPGQQLQAVAV
LQEQKVGCYVRNDPNVPVQRILRTLLRMKMSGEIDDIIRLYTGKSGGEP
>Pfl_3976 Metal dependent phosphohydrolase, HD region
MPSPLRPEQRRFPLHVHISVMFTFLLLLTGVVLGLFNYRQTTQIILSSSE
KLFNRIEQDVRLDLQATYAPIRHLLSLLADNPAARSSGLEPRLALLKPFS
QSLTDNPDLASLYLGYGNGDFFMVRPLRTPALKTLLKAPDAAAFQVWSIE
HDASGQAHSQSLFFDQALSPVGRQDNPDDPYDPRSRAWYINARQQTEQIT
TEPYVFFSTHNVGTTLARRSGDDAVIGADLTLDALSATLIKHVVTPATEI
VLFDADGNAVAYPDSSRLIVDDRTARLAKAADLSPALNALLSGHQGNRLK
ADGRLWIVARSQLQEGGPKGLQMALLVPEDELLVDAYRMRWQGALITLAT
LLLCLPLGWLISRILVKPLHALVKEADAIRSFDFNFPVTRRSLVLEIDQL
SLSMARMKDTLASFFRITDSLTAETRFEPLLQRALFETVQIAQAQAGLIY
LRENDGNRMEPYGLVVDGASQALTAFDIQGRNLDATQGPEWFRQLASADT
VVSNLGFEQATDLRKVLLAMASPRVHLIGIRLHNRHNETVGLLVLLINDS
GTASDLEKLRPDRIAFLQAVSGAAAVSIESQRLQARQKQLLDAFIQLLAG
AIDAKSPYTGGHCQRVPELTLMLAQAAAASQAPAFSAYQPNEDEWEALHI
AAWLHDCGKVTTPEYVVDKATKLETLNDRLHEIRTRFEVLKRDAWVSYWQ
ALAMGGEERQLADLRDATLTALDDDFAFVAHCNLGSEAMAEADLQRLQGI
ARRTWTRTLDDRLGLSWEENRRQARTPAPPLPVTEPLLADKPEHLLERAE
GELIPENNPWGFKLDVPPYKYNRGELYNLSIPRGTLTREERYIINHHMVQ
TILMLSHLPFPGHLNSVAEIAGGHHEKMDGTGYPKRLKREDMSLPARMIA
IADIFEALTAADRPYKKAKSLSEALGIMATMCREAHIDAELFELFIRDGV
YLQYATRFLDPRQIDAVDPAAVLLKAGLAA
>Pfl_5606 Two component Transcriptional regulator, Winged helix family
MVGRSILIVDDEAPIREMIAVALEMAGYDCLEAENSQQAHAIIVDRKPDL
ILLDWMLPGTSGIELARRLKRDELTGDIPIIMLTAKGEEDNKIQGLEVGA
DDYITKPFSPRELVARLKAVLRRAGPTDGEAPIEVGGLLLDPISHRVTID
GRPAEMGPTEYRLLQFFMTHQERAYTRGQLLDQVWGGNVYVEERTVDVHI
RRLRKALGDAYENLVQTVRGTGYRFSTKA
>Pfl_0622 chemotaxis sensory transducer
MRLKLLTNLNTLLLVAVCVALGATLWWSQKALERPYLLMERYLGLSQQFQ
NVVARNVEDYLASGDALRLSSASQAIDDLQKELGELPPALADTLRPSLAD
LDGFSKTDLLAAGKLAGDPQALLLQAERELSASLDQLSTYAGGNATYLTP
LLIASQHLGKLSLARDKLVSSGRSELAADVEREVSNIRAQAQTIDALPLL
GVVASSESGSDDFAAMMGIESTAKAAAEDAGVGLKRELNSLLGRYPAELA
RTREQIQKRTDLSTATHQKIAAVQQAIAGLEPVVRAQHGQIQGEVRLMQG
VMIGLILLIALLIDTLQRRLARTLTNLAPALSTWAEGDFSRDIHLGKTNR
ELHDIEASLNRLRAYLVDLVGTIRGNAEQVAGSSRTLAELSNDLHSGAEH
QAGDTALIRDSLGELEATIQQVAGDARQAADASRHAGLAVEHGQQVIGQS
LTGLHALVGEVQGNAQMIEHLAEESATIGGVLTVIRSIADQTNLLALNAA
IEAARAGEMGRGFAVVAEEVRSLAQRTAGATAEIQTLIAGLQTAARQSVE
GMRAQVEHAEATANQAQSADGALDKIVGAIQTISDTAIRIADITAQQSGA
VSEIRDHSERIHQLGGDNLLRIGQGREQGENLLLLGGQLHTAVQAFRV
>Pfl_0124 chemotaxis sensory transducer, Cache sensor
MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIRQNLQSSVQQAGDL
TASSVQNWMSGRILVLENLAQNVAHQGKNADFPGLVDQPAFTSNFQFTYV
GQANGVFTQRPDAKMPDGYDPRQRPWYKQAVAADQTMLTPPYMAAVGGLV
VTIAMPVKKNGELLGVVGGDLSLETLVKIINSVDFGGLGHAFLVSGDGQV
IVSPDKDQVMKNLKDIYPNAGVRIEKGNQNVVLNGQERILSFTPVAGLPN
AEWYIGLSIDRDKAYAALSQFRTSAVIAMFVAVGAIAVFLSLLITVLMRP
LITMGRAMQDIAQGEGDLTRRLVVESKDEFGELGSSFNQFVERIHASISE
VSSATRHVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINQLGAATQEI
ARNAADASQHASGASEQADDGRQVVEQTIQAMTELSQKISLSCTQIETLN
ASTDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRN
LAHRTQESAEEIHKMITSLQVGSREAVTTMNASQASSEETVEVANQAGLR
LVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNVDVNQINLLNQQSVANL
NETLKDCDALSQQANRLKQLVDSFKI
>Pfl_0464 Glutamate-ammonia-ligase adenylyltransferase
MTLPALAELPAILLPLVSRSEQSFRAAVAQLEDDHGFSSWTPERWAQFAR
VSAASDFVIEQGVRDPFMLLSLVQSGELDRPFARGELCGQIAEAVSTAQT
EDELGRVLRRQRTRHQVRIIWRDLNRQADLVQTCRDLSDMADASIDQAYQ
WLYRRHCEQFGTPTGRRSGEPQQMVILGMGKLGAVELNLSSDIDLIFAYP
EGGETVGVKRPLDNQEFFIRLGQRLIKALDPITVDGFVFRVDMRLRPYGS
SGALVLSFNALEQYYQDQGRDWERYAMIKSRVVAGDQVAGEQLQEMLRPF
VYRRYLDFSAIEALRTMKQLIQQEVRRKGMADNIKLGSGGIREVEFIAQA
FQLIHGGRDLSLQQRPLLKVLSTLEGQGYLPPAVISELREGYEFLRYTEH
AIQAIADRQTQMLPDSAQDQARIAFMLGFSDWDAFHEKLMFWRGRVAWHF
AQVIADPDEDEGVESEVVVGGEWLPLWEEAQDEEAACRQLEEGGFADATK
ALKALASLRASPQLRAMQRLGRERLDAFIPRLLAQAVEHENPDLVLERVL
PLVEAVARRSAYLVLLTENPGALRRLLTLCAASPWIAEQITRFPLLLDEL
LNEGRLFKPPLAPELAAELRERLTRIPEDDLEQQMEALRHFKLAHRLRVA
ASEIAGSLPLMKVSDYLTWLAEAILEQVLALAWRQTVAKYGTPLRTDGTL
CDPGFIIVGYGKVGGIELGHGSDLDLVFIHDGDQQAETDGPKPIDGTQFF
TRLGQRIIHLLTAQTNSGQLYEVDMRLRPSGASGLLVSSLGAFARYQENE
AWTWEHQALVRARVLVGSKDVGQAFENVRAQVLGKARDLAKLQQEVSEMR
AKMRDNLGSKSTAAGTGANAFEATAPFDLKQDAGGIVDIEFMVQYAALAW
SQTHPALLRWTDNIRILEELEHEGLMPAEDASLLREAYKAYRSAAHRQAL
QKDAGVIPGDQFADERRQVMRIWRELGLS
>Pfl_4022 chemotaxis sensory transducer
MGAWLSNISLKYKFWAVNAVAFVTTLLLVLYAVQLEQQARSHAAQTSAQA
QAQLLKAWPVGQALPKSDQVLTFKRGEAPRLNDQPLLEITDSSGWIEISH
LPLFGENPLLGAEVFSRADGQQVAVIAYAPSLSQVFSERFANYAVAVFIL
MLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLAARVPLACKDEVGQM
ANAFNAMQAGYQRVVTTVANTARQLDVGAARLASSMNEVRHGMLGQQSET
DQAATAINEMTATVYHIAQHAGATRDLSQTADGLAGSGQQVVSRVQTSIA
GLSSGVQQTAEMIQRLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAAR
AGEMGRGFAVVADEVRNLAKRVQTSTDEITTMVSALQAGTRDAVDFMQES
SYKADDCVQQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQSQVAEEMN
RAVVSIRDVTENTVQQTVDSATTSNELATLAGELNKAIGQLKL
>Pfl_5139 Putative Serine protein kinase, PrkA
MSIFSHFQQRFESTRQEEFSLQEYLELCKKDRSAYVSAAERLLMAIGEPE
LLDTSTNSRLSRIFSNKVIRRYPAFEDFHGMEECIDQIVSYFRHAAQGLE
EKKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNA
TEDGAILEEDFGIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLYPSIL
NQIAVAKTEPGDENNQDISALVGKVDIRKLEEFPQNDADAYSYSGALCRA
NQGLMEFVEMFKAPIKVLHPLLTATQEGNYNSTEGLGAIPFTGILLAHSN
ESEWHTFRNNKNNEAFIDRIYIVKVPYCLRVSDEVKIYDKLLFNSSLAKA
HCAPDTLKMLAQFTVLSRLKEPENSNIYSKMRVYDGENLKDTDPKAKSIQ
EYRDAAGVDEGMNGLSTRFAFKILSKVFNFDPHEIAANPVHLLYVLEQQI
EQEQFQAETRERYLRYLKEYLAPRYIEFIGKEIQTAYLESYSEYGQNIFD
RYVLYADFWIQDQEYRDPETGEILNRVALNEELEKIEKPAGISNPKDFRN
EIVNFVLRARANNNGKNPTWLSYEKLRVVIEKKMFSNTEDLLPVISFNAK
ASKEDQQKHNDFVTRMVERGYTDKQVRLLSEWYLRVRKSQ
>Pfl_3550 Putative diguanylate cyclase (GGDEF domain)
MLKASLRSHLTLWFAGLSLLTLLSVGFYVGDIATEQMKRASGNALLSTAR
SAAALLGEQLRERQLEVYLLSRAPHLERGDLDNPAILKSMQLRTEARTEY
AWMGVTDAQGRVHQAVNGLLVGQAVQQRPWFQAGLRGEYTGDPHEAVLLA
KLLPGLPNGEPLRFIDFAAPIRNADGQVIGVLGAHAHWSWVTHIVESAAM
SHKGAEPDIEALIIDHDGKVLYPEALVGQQMPAKDPNSPGWVVGNGYLTS
EVTVPTPTGTALSWSIAVRQPLDTALQPARLLFYKLLLLGVFAAVAFGLV
AYYLALYLSRPIEQLARSAQKVQNNQPGAHFPLRHPVREIAQLGQSIDAM
TQSLLAKERELQETNASLEATVAQRTAALTLANAELLNLATHDGLTGVYN
RRRFDEKLTEYSLLFRRTGRPFALLLIDADHFKRINDTHGHAAGDDVLRQ
LAQLIQISIRSTDFVARYGGEEFAVLLPEIAKPDTPDIVAEKIRSAIAEA
DFPAVGPVTVSIGVSLADPADNTPTTLVKRADQQLYKAKAAGRNQVACQA
SLFEVSENG
>Pfl_0131 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MSLFKQLLIAICLFLVVAFTGSFMVSLESSRTQYVNQLRSHAQDAATALA
LSLTPNIDDPAMVELLVSSIFDSGYYSSIRVVDLKTDQTIVERNGIPAVT
NVPDWFVKLIGLEPAGGDALVSRGWEQAARVEVVSHPMFALAKLWQSALG
SLGWLLVCGAVSAVLGALLLRRQLKPLDYMVKQSHAIARREFLSLPDLPR
TPELRRVVLAMNQMVEKLKALFQEQAERSEKLRTESYQDNLTGLANRRYF
EMQLNARVSNPEQASSGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQL
SRECAKYPETQNLVTRIRGGEFAVLAPGMTREEALQLAQSLDSALSSLYA
TGATDVAAVASIGLAPFAHGDSPQAVLSLGDQALAQAEGQGEQNWACLDQ
SLVADVGDDHHAWHRLLDQALNQRRFELFFQPVVAAQDTQLVLHYKVLSR
LLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGHEESLALNL
SSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQAVLEQLTRRL
RELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRLFI
EAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG
>Pfl_0192 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MDGRMSATYRDALRAALLYLVLAVVWLQGTGYLLNSFFDSSDELLRWQLI
NGYLFVALSAGLIFLARARLFECLGIGARLRERQADRERLRQAAAVFDCT
REGVLVTDRQGLIVHVNRAFMEITGYQRDEVIGQQPSLFKSGHHPPGFYQ
AMFASLQARDEWSGEIWNRRKSGEIYPQWQTIRVIRDDDNRLSHYVAVFS
DISAIKDSEHELKHLAHHDPLTDLPNRLLFSDRAEQALASAQTHKRGCAL
LMIDLDHFKLINDSLGHTIGDRLLKAVAARLQALFGPGITLARLGGDEFA
VLLESCPQPAQAAALAQRILDALKEPFCLDGHELFINASLGISLFPSDAL
SAEQLLRNADAALFKAKSSGRNGYALYTEELTAHAQQRVEIAFELRRALE
QQELRVYYQPVHDLQTSRLIGVEALVRWEHPQRGLVSPAEFIPIAERTGL
ISEIDAWVMQQACRQMCQWQQAGVVLSFVAVNVSSRLFARRELYQQVAQV
LHETGLDPAYLELEVTESAVMDDPEVALEQMHRLRELGIRLAIDDFGTGY
SSLLRLKRLPVQKLKIDQGFVAGLPWDEDDAAIVRVIIALARSMGMQVHA
EGIEQVEQAAFLLGQACDLGQGYWFGRPVPEAQIDWNRAPLIG
>Pfl_3872 SOS-response transcriptional repressor, LexA
MLKLTPRQAEILAFIKRCLEDNGYPPTRAEIAQELGFKSPNAAEEHLKAL
ARKGAIEMTPGASRGIRIPGFEAKVDESTLPIIGRVAAGAPILAQQHIEE
SCNINPAFFHPRADYLLRVHGMSMKDIGIFDGDLLAVHTTREARNGQIVV
ARIGDEVTVKRFKRDGSKVWLIAENPEFAPIEVNLKDQELVIEGLSVGVI
RR