Gene list
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COG category: Signal transduction mechanisms
Organism: Shigella sonnei Ss046, Ss046
Number of genes found: 161
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| Shigella sonnei Ss046, Ss046 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | SSO_1634 | conserved hypothetical protein | RecName: Full=Diguanylate cyclase DosC; Short=DGC; EC=2.7.7.65; AltName: Full=Direct oxygen-sensing cyclase; | chromosome | CDS | 1723836 | 1383 | + | 0.442516 |
| NA | SSO_3892 | putative transposase | SubName: Full=Putative transposase; | chromosome | CDS | 4101517 | 2109 | + | 0.440019 |
| NA | SSO_2585 | putative cytochrome C-type biogenesis protein | SubName: Full=Putative cytochrome C-type biogenesis protein; | chromosome | CDS | 2730236 | 2244 | - | 0.465241 |
| NA | SSO_1635 | putative enzyme | SubName: Full=Putative enzyme; | chromosome | CDS | 1725219 | 2424 | + | 0.503713 |
| NA | SSO_1329 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1403466 | 552 | + | 0.481884 |
| NA | SSO_2396 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2528169 | 486 | - | 0.530864 |
| NA | SSO_1345 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1419309 | 1629 | - | 0.506446 |
| NA | SSO_2473 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 2614318 | 735 | + | 0.47483 |
| NA | SSO_0248 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 270475 | 1281 | - | 0.570648 |
| NA | SSO_0871 | hypothetical bacteriophage protein | SubName: Full=Hypothetical bacteriophage protein; | chromosome | CDS | 926496 | 300 | + | 0.416667 |
| NA | SSO_1452 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1525791 | 714 | + | 0.42437 |
| NA | SSO_2436 | putative endopeptidase | SubName: Full=Putative endopeptidase; | chromosome | CDS | 2571789 | 459 | - | 0.51634 |
| NA | SSO_4515 | putative inner membrane protein | SubName: Full=Putative inner membrane protein; | chromosome | CDS | 4790045 | 348 | + | 0.448276 |
| NA | SSO_1606 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1687446 | 480 | + | 0.491667 |
| NA | SSO_1790 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1887275 | 1293 | + | 0.475638 |
| NA | SSO_2013 | conserved hypothetical protein | RecName: Full=Cellulose synthesis regulatory protein; | chromosome | CDS | 2107265 | 1710 | - | 0.516959 |
| aer | SSO_3210 | aerotaxis sensor receptor, flavoprotein | SubName: Full=Aerotaxis sensor receptor, flavoprotein; | chromosome | CDS | 3373179 | 1521 | - | 0.550953 |
| apaH | SSO_0057 | diadenosine tetraphosphatase | RecName: Full=Bis(5-nucleosyl)-tetraphosphatase, symmetrical; EC=3.6.1.41; AltName: Full=Ap4A hydrolase; AltName: Full=Diadenosine 5,5-P1,P4-tetraphosphate pyrophosphohydrolase; AltName: Full=Diadenosine tetraphosphatase; | chromosome | CDS | 59716 | 843 | - | 0.55516 |
| arcA | SSO_4551 | negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) | SubName: Full=Negative response regulator of genes in aerobic pathways, (Sensors, ArcB and CpxA); | chromosome | CDS | 4823203 | 717 | - | 0.51046 |
| arcB | SSO_3358 | histidine protein kinase/phosphatase | SubName: Full=Histidine protein kinase/phosphatase; | chromosome | CDS | 3529763 | 2337 | - | 0.504065 |
| argT | SSO_2368 | lysine-, arginine-, ornithine-binding periplasmic protein | SubName: Full=Lysine-, arginine-, ornithine-binding periplasmic protein; | chromosome | CDS | 2498777 | 783 | - | 0.507024 |
| artI | SSO_0848 | arginine 3rd transport system periplasmic binding protein | SubName: Full=Arginine 3rd transport system periplasmic binding protein; | chromosome | CDS | 899035 | 732 | - | 0.501366 |
| artJ | SSO_0845 | arginine 3rd transport system periplasmic binding protein | SubName: Full=Arginine 3rd transport system periplasmic binding protein; | chromosome | CDS | 896620 | 732 | - | 0.454918 |
| atoC | SSO_2279 | response regulator of ato | SubName: Full=Response regulator of ato; | chromosome | CDS | 2396839 | 1386 | + | 0.488456 |
| atoS | SSO_2278 | sensor protein AtoS for response regulator AtoC | SubName: Full=Sensor protein AtoS for response regulator AtoC; | chromosome | CDS | 2395016 | 1827 | + | 0.484948 |
| baeR | SSO_2131 | transcriptional response regulatory protein | SubName: Full=Transcriptional response regulatory protein; | chromosome | CDS | 2236307 | 723 | + | 0.539419 |
| baeS | SSO_2130 | sensor protein (for BaeR) | SubName: Full=Sensor protein (For BaeR); | chromosome | CDS | 2234907 | 1404 | + | 0.534188 |
| barA | SSO_2943 | sensor-regulator, activates OmpR by phophorylation | SubName: Full=Sensor-regulator, activates OmpR by phophorylation; | chromosome | CDS | 3084784 | 2757 | + | 0.500181 |
| basR | SSO_4288 | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 4551594 | 669 | - | 0.530643 |
| basS | SSO_4287 | sensor protein for BasR | SubName: Full=Sensor protein for BasR; | chromosome | CDS | 4550493 | 1092 | - | 0.54304 |
| bglJ | SSO_4513 | 2-component transcriptional regulator | SubName: Full=2-component transcriptional regulator; | chromosome | CDS | 4788512 | 678 | + | 0.454277 |
| bolA | SSO_0418 | possible regulator of murein genes | SubName: Full=Possible regulator of murein genes; | chromosome | CDS | 443236 | 351 | + | 0.481481 |
| cheA | SSO_1229 | sensory transducer kinase between chemo-signal receptors and CheB and CheY | SubName: Full=Sensory transducer kinase between chemo-signal receptors and CheB and CheY; | chromosome | CDS | 1302515 | 1965 | + | 0.531298 |
| cheB | SSO_1234 | response regulator for chemotaxis | RecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; | chromosome | CDS | 1309338 | 1050 | + | 0.537143 |
| cheR | SSO_1233 | response regulator for chemotaxis; protein glutamate methyltransferase | RecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; | chromosome | CDS | 1308475 | 861 | + | 0.537747 |
| cheW | SSO_1230 | positive regulator of CheA protein activity | SubName: Full=Positive regulator of CheA protein activity; | chromosome | CDS | 1304500 | 504 | + | 0.515873 |
| cheY | SSO_1235 | chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components | SubName: Full=Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components; | chromosome | CDS | 1310402 | 390 | + | 0.492308 |
| cheZ | SSO_1236 | chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator | RecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; | chromosome | CDS | 1310802 | 645 | + | 0.533333 |
| chpA | SSO_2939 | probable growth inhibitor, PemK-like, autoregulated | SubName: Full=Probable growth inhibitor, PemK-like, autoregulated; | chromosome | CDS | 3080483 | 336 | - | 0.46131 |
| chpR | SSO_2940 | suppressor of inhibitory function of ChpA, PemI-like, autoregulated | SubName: Full=Suppressor of inhibitory function of ChpA, PemI-like, autoregulated; | chromosome | CDS | 3080818 | 249 | - | 0.485944 |
| citA | SSO_0572 | putative sensor-type protein | SubName: Full=Putative sensor-type protein; | chromosome | CDS | 612015 | 1659 | + | 0.500301 |
| citB | SSO_0573 | sequence similarity to Shigella regulator | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 613642 | 681 | + | 0.503671 |
| cmtB | SSO_3088 | PTS system, mannitol-specific enzyme II component, cryptic | SubName: Full=PTS system, mannitol-specific enzyme II component, cryptic; | chromosome | CDS | 3250661 | 444 | - | 0.427928 |
| cpxA | SSO_4081 | probable sensor protein acting on arcA | SubName: Full=Probable sensor protein acting on arcA; | chromosome | CDS | 4317644 | 1374 | - | 0.546579 |
| cpxR | SSO_4082 | transcriptional regulator in 2-component system | SubName: Full=Transcriptional regulator in 2-component system; | chromosome | CDS | 4319014 | 699 | - | 0.513591 |
| creB | SSO_4548 | catabolic regulation response regulator | SubName: Full=Catabolic regulation response regulator; | chromosome | CDS | 4819620 | 690 | + | 0.552174 |
| creC | SSO_4549 | catabolite repression sensor kinase for PhoB | SubName: Full=Catabolite repression sensor kinase for PhoB; | chromosome | CDS | 4820309 | 1425 | + | 0.541053 |
| crp | SSO_3488 | cyclic AMP receptor protein | SubName: Full=Cyclic AMP receptor protein; | chromosome | CDS | 3648119 | 633 | + | 0.49763 |
| csrA | SSO_2840 | carbon storage regulator | RecName: Full=Carbon storage regulator; | chromosome | CDS | 2980051 | 186 | - | 0.494624 |
| cstA | SSO_0549 | carbon starvation protein | SubName: Full=Carbon starvation protein; | chromosome | CDS | 589425 | 2106 | + | 0.5717 |
| dksA | SSO_0157 | dnaK suppressor protein | RecName: Full=RNA polymerase-binding transcription factor DksA; | chromosome | CDS | 174346 | 456 | - | 0.526316 |
| envZ | SSO_3535 | protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC | SubName: Full=Protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC; | chromosome | CDS | 3697210 | 1353 | - | 0.570584 |
| evgA | SSO_2460 | putative positive transcription regulator (sensor EvgS) | SubName: Full=Putative positive transcription regulator (Sensor EvgS); | chromosome | CDS | 2596923 | 615 | + | 0.403252 |
| evgS | SSO_2461 | putative sensor for regulator EvgA | SubName: Full=Putative sensor for regulator EvgA; | chromosome | CDS | 2597542 | 3594 | + | 0.409293 |
| fecR | SSO_4464 | regulator for fec operon, periplasmic | SubName: Full=Regulator for fec operon, periplasmic; | chromosome | CDS | 4736878 | 954 | - | 0.590147 |
| fliY | SSO_1197 | putative periplasmic binding transport protein | SubName: Full=Putative periplasmic binding transport protein; | chromosome | CDS | 1275810 | 801 | + | 0.496879 |
| fnr | SSO_1799 | transcriptional regulation of aerobic, anaerobic respiration, osmotic balance | SubName: Full=Transcriptional regulation of aerobic, anaerobic respiration, osmotic balance; | chromosome | CDS | 1896871 | 753 | + | 0.50996 |
| frvA | SSO_4070 | PTS system, fructose-specific IIA component | SubName: Full=PTS system, fructose-specific IIA component; | chromosome | CDS | 4306628 | 447 | - | 0.50783 |
| frvR | SSO_4067 | putative frv operon regulatory protein | SubName: Full=Putative frv operon regulatory protein; | chromosome | CDS | 4302358 | 1749 | - | 0.498571 |
| glnE | SSO_3190 | adenylylating enzyme for glutamine synthetase | RecName: Full=Glutamate-ammonia-ligase adenylyltransferase; EC=2.7.7.42; AltName: Full=Glutamine-synthetase adenylyltransferase; Short=ATase; AltName: Full=[Glutamate--ammonia-ligase] adenylyltransferase; | chromosome | CDS | 3351049 | 2841 | - | 0.560014 |
| glnG | SSO_4040 | response regulator for gln | SubName: Full=Response regulator for gln; | chromosome | CDS | 4270770 | 1410 | - | 0.565957 |
| glnH | SSO_0791 | periplasmic glutamine-binding protein | SubName: Full=Periplasmic glutamine-binding protein; | chromosome | CDS | 837422 | 747 | - | 0.485944 |
| glnL | SSO_4041 | histidine protein kinase sensor for GlnG regulator | SubName: Full=Histidine protein kinase sensor for GlnG regulator; | chromosome | CDS | 4272191 | 1050 | - | 0.552381 |
| hisJ | SSO_2367 | histidine-binding periplasmic protein of high-affinity histidine transport system | SubName: Full=Histidine-binding periplasmic protein of high-affinity histidine transport system; | chromosome | CDS | 2497774 | 783 | - | 0.48659 |
| hnr | SSO_1944 | Hnr protein | RecName: Full=Regulator of RpoS; | chromosome | CDS | 2044274 | 1014 | - | 0.487179 |
| hydG | SSO_4177 | response regulator of hydrogenase 3 activity (sensor HydH) | SubName: Full=Response regulator of hydrogenase 3 activity (Sensor HydH); | chromosome | CDS | 4421511 | 1326 | + | 0.567119 |
| hydH | SSO_4176 | sensor kinase for HydG, hydrogenase 3 activity | SubName: Full=Sensor kinase for HydG, hydrogenase 3 activity; | chromosome | CDS | 4420138 | 1377 | + | 0.547567 |
| hyfR | SSO_2572 | putative 2-component regulator, interaction with sigma 54 | SubName: Full=Putative 2-component regulator, interaction with sigma 54; | chromosome | CDS | 2714015 | 1992 | + | 0.52761 |
| kdpD | SSO_0646 | sensor for high-affinity potassium transport system | SubName: Full=Sensor for high-affinity potassium transport system; | chromosome | CDS | 683071 | 2685 | - | 0.579143 |
| kdpE | SSO_0645 | regulator of kdp operon | SubName: Full=Regulator of kdp operon; | chromosome | CDS | 682397 | 678 | - | 0.570796 |
| lexA | SSO_4223 | regulator for SOS(lexA) regulon | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 4481538 | 609 | + | 0.522168 |
| narL | SSO_1956 | pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes | SubName: Full=Pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes; | chromosome | CDS | 2058928 | 651 | + | 0.514593 |
| narP | SSO_2251 | nitrate/nitrite response regulator | SubName: Full=Nitrate/nitrite response regulator; | chromosome | CDS | 2365276 | 648 | + | 0.527778 |
| narQ | SSO_2549 | sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL) | SubName: Full=Sensor for nitrate reductase system, protein histidine kinase (Acts on NarP and narL); | chromosome | CDS | 2687798 | 1701 | + | 0.516167 |
| narX | SSO_1955 | nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator | SubName: Full=Nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator; | chromosome | CDS | 2057139 | 1797 | + | 0.532554 |
| nrfB | SSO_4252 | formate-dependent nitrite reductase | SubName: Full=Formate-dependent nitrite reductase; | chromosome | CDS | 4515234 | 573 | + | 0.539267 |
| ompR | SSO_3536 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 3698559 | 720 | - | 0.547222 |
| phoB | SSO_0376 | positive response regulator for pho regulon | SubName: Full=Positive response regulator for pho regulon; | chromosome | CDS | 402236 | 690 | + | 0.54058 |
| phoH | SSO_1039 | PhoB-dependent, ATP-binding pho regulon component | SubName: Full=PhoB-dependent, ATP-binding pho regulon component; | chromosome | CDS | 1122592 | 1065 | + | 0.522066 |
| phoP | SSO_1148 | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 1229800 | 672 | - | 0.46875 |
| phoQ | SSO_1147 | sensor protein PhoQ | SubName: Full=Sensor protein PhoQ; | chromosome | CDS | 1228340 | 1461 | - | 0.513347 |
| phoR | SSO_0377 | positive and negative sensor protein for pho regulon | SubName: Full=Positive and negative sensor protein for pho regulon; | chromosome | CDS | 402983 | 1296 | + | 0.529321 |
| pocR | SSO_2056 | pdu/cob regulatory protein | SubName: Full=Pdu/cob regulatory protein; | chromosome | CDS | 2154849 | 648 | - | 0.453704 |
| proQ | SSO_1330 | Activator of ProP osmoprotectant transporter | RecName: Full=ProP effector; | chromosome | CDS | 1404114 | 699 | + | 0.530758 |
| pspA | SSO_1836 | phage shock protein | SubName: Full=Phage shock protein; | chromosome | CDS | 1930967 | 669 | - | 0.490284 |
| pspC | SSO_1834 | phage shock protein | SubName: Full=Phage shock protein; | chromosome | CDS | 1930330 | 360 | - | 0.502778 |
| pspF | SSO_1837 | psp operon transcriptional activator | SubName: Full=Psp operon transcriptional activator; | chromosome | CDS | 1931787 | 993 | + | 0.522659 |
| ptsN | SSO_3352 | phosphotransferase system enzyme IIA, regulates N metabolism | SubName: Full=Phosphotransferase system enzyme IIA, regulates N metabolism; | chromosome | CDS | 3525652 | 492 | + | 0.520325 |
| ptsP | SSO_2986 | PTS system enzyme I | SubName: Full=PTS system enzyme I; | chromosome | CDS | 3135804 | 2247 | - | 0.538051 |
| ptxA | SSO_4377 | putative PTS system enzyme II A component | RecName: Full=Ascorbate-specific phosphotransferase enzyme IIA component; EC=2.7.1.-; AltName: Full=PTS system ascorbate-specific EIIA component; | chromosome | CDS | 4646958 | 465 | + | 0.554839 |
| qseB | SSO_3164 | quorum sensing regulator B | SubName: Full=Quorum sensing regulator B; | chromosome | CDS | 3323924 | 660 | + | 0.513636 |
| qseC | SSO_3165 | quorum sensing regulator C | SubName: Full=Quorum sensing regulator C; | chromosome | CDS | 3324580 | 1350 | + | 0.527407 |
| rcsB | SSO_2276 | positive response regulator for colanic capsule biosynthesis | SubName: Full=Positive response regulator for colanic capsule biosynthesis; | chromosome | CDS | 2391150 | 651 | + | 0.477727 |
| rcsC | SSO_2277 | sensor for ctr capsule biosynthesis | SubName: Full=Sensor for ctr capsule biosynthesis; | chromosome | CDS | 2392000 | 2802 | - | 0.509993 |
| relA | SSO_2941 | (p)ppGpp synthetase I | SubName: Full=(P)ppGpp synthetase I; | chromosome | CDS | 3081144 | 2235 | - | 0.53557 |
| rseA | SSO_2696 | sigma-E factor, negative regulatory protein | RecName: Full=Anti-sigma-E factor RseA; AltName: Full=Regulator of SigE; AltName: Full=Sigma-E anti-sigma factor RseA; AltName: Full=Sigma-E factor negative regulatory protein; | chromosome | CDS | 2853820 | 651 | - | 0.520737 |
| rseB | SSO_2695 | regulates activity of sigma-E factor | SubName: Full=Regulates activity of sigma-E factor; | chromosome | CDS | 2852864 | 957 | - | 0.504702 |
| rseC | SSO_2694 | sigma-E factor | SubName: Full=Sigma-E factor; | chromosome | CDS | 2852388 | 480 | - | 0.539583 |
| rstA | SSO_1552 | response transcriptional regulatory protein (RstB sensor) | SubName: Full=Response transcriptional regulatory protein (RstB sensor); | chromosome | CDS | 1631795 | 729 | - | 0.491084 |
| rstB | SSO_1551 | sensor histidine protein kinase | SubName: Full=Sensor histidine protein kinase; | chromosome | CDS | 1630490 | 1302 | - | 0.506912 |
| rtn | SSO_2232 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2343523 | 1557 | + | 0.504175 |
| spoT | SSO_3755 | (p)ppGpp synthetase II | SubName: Full=(P)ppGpp synthetase II; | chromosome | CDS | 3942593 | 2109 | - | 0.536747 |
| spy | SSO_1414 | periplasmic protein related to spheroblast formation | SubName: Full=Periplasmic protein related to spheroblast formation; | chromosome | CDS | 1489467 | 462 | + | 0.519481 |
| tap | SSO_1232 | methyl-accepting chemotaxis protein IV | SubName: Full=Methyl-accepting chemotaxis protein IV; | chromosome | CDS | 1306855 | 1602 | + | 0.535581 |
| tar | SSO_1231 | methyl-accepting chemotaxis protein II | SubName: Full=Methyl-accepting chemotaxis protein II; | chromosome | CDS | 1305148 | 1662 | + | 0.529483 |
| torR | SSO_1003 | response transcriptional regulator for torA | SubName: Full=Response transcriptional regulator for torA; | chromosome | CDS | 1076910 | 693 | - | 0.525253 |
| torS | SSO_1001 | sensor protein torS | SubName: Full=Sensor protein torS; | chromosome | CDS | 1073082 | 2715 | - | 0.541068 |
| trg | SSO_1721 | methyl-accepting chemotaxis protein III | SubName: Full=Methyl-accepting chemotaxis protein III; | chromosome | CDS | 1823714 | 1641 | - | 0.511274 |
| uhpA | SSO_3623 | response regulator, positive activator of uhpT transcription (sensor, uhpB) | SubName: Full=Response regulator, positive activator of uhpT transcription (Sensor, uhpB); | chromosome | CDS | 3793153 | 591 | - | 0.58714 |
| uhpB | SSO_3622 | sensor histidine protein kinase phosphorylates UhpA | SubName: Full=Sensor histidine protein kinase phosphorylates UhpA; | chromosome | CDS | 3791651 | 1506 | - | 0.570385 |
| umuD | SSO_1174 | UmuD | SubName: Full=UmuD; | chromosome | CDS | 1252592 | 420 | + | 0.483333 |
| uspA | SSO_3730 | universal stress protein | RecName: Full=Universal stress protein; | chromosome | CDS | 3911462 | 435 | + | 0.491954 |
| uvrY | SSO_1204 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 1281990 | 657 | + | 0.496195 |
| waaP | SSO_3777 | lipopolysaccharide core biosynthesis protein | SubName: Full=Lipopolysaccharide core biosynthesis protein; | chromosome | CDS | 3961927 | 798 | + | 0.474937 |
| wzb | SSO_2114 | probable protein-tyrosine-phosphatase | SubName: Full=Probable protein-tyrosine-phosphatase; | chromosome | CDS | 2208099 | 444 | - | 0.538288 |
| yaeG | SSO_0175 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 197365 | 1176 | + | 0.526361 |
| yaiC | SSO_0360 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 386508 | 852 | + | 0.537559 |
| ybcZ | SSO_0521 | putative 2-component sensor protein | SubName: Full=Putative 2-component sensor protein; | chromosome | CDS | 553764 | 1449 | - | 0.520359 |
| ybdQ | SSO_0559 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 600442 | 429 | - | 0.496504 |
| ybeJ | SSO_0609 | putative periplasmic binding transport protein | SubName: Full=Putative periplasmic binding transport protein; | chromosome | CDS | 648130 | 909 | - | 0.490649 |
| ybeZ | SSO_0614 | putative ATP-binding protein in pho regulon | SubName: Full=Putative ATP-binding protein in pho regulon; | chromosome | CDS | 654443 | 1080 | - | 0.54537 |
| ybiI | SSO_0782 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 827060 | 267 | - | 0.520599 |
| yccY | SSO_0989 | putative phosphatase | SubName: Full=Putative phosphatase; | chromosome | CDS | 1063873 | 459 | - | 0.51634 |
| ydaA | SSO_1800 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1897775 | 951 | + | 0.502629 |
| ydeH | SSO_1593 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1674401 | 891 | + | 0.445567 |
| yeaG | SSO_1379 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1452269 | 1935 | - | 0.500258 |
| yeaI | SSO_1377 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1449251 | 1476 | - | 0.382791 |
| yeaJ | SSO_1375 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1446804 | 1440 | - | 0.458333 |
| yeaP | SSO_1367 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1441595 | 1155 | - | 0.465801 |
| yecG | SSO_1222 | putative regulator | RecName: Full=Universal stress protein; | chromosome | CDS | 1297168 | 429 | - | 0.454545 |
| yedV | SSO_2026 | putative 2-component sensor protein | SubName: Full=Putative 2-component sensor protein; | chromosome | CDS | 2119522 | 1359 | - | 0.395143 |
| yedW | SSO_2027 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 2120880 | 843 | - | 0.431791 |
| yegE | SSO_2120 | putative sensor-type protein | SubName: Full=Putative sensor-type protein; | chromosome | CDS | 2215710 | 3318 | + | 0.525015 |
| yehT | SSO_2171 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2275575 | 735 | - | 0.496599 |
| yehU | SSO_2172 | putative 2-component sensor protein | SubName: Full=Putative 2-component sensor protein; | chromosome | CDS | 2276291 | 1686 | - | 0.50949 |
| yeiL | SSO_2219 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2328121 | 660 | + | 0.45 |
| yfhA | SSO_2637 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 2791443 | 1335 | - | 0.54382 |
| yfhK | SSO_2639 | putative 2-component sensor protein | SubName: Full=Putative 2-component sensor protein; | chromosome | CDS | 2793645 | 1491 | - | 0.525822 |
| yfiN | SSO_2761 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2914897 | 1050 | + | 0.493333 |
| ygaA | SSO_2853 | putative 2-component transcriptional regulator | RecName: Full=Anaerobic nitric oxide reductase transcription regulator NorR; | chromosome | CDS | 2992013 | 1590 | - | 0.557862 |
| ygaG | SSO_2831 | conserved hypothetical protein | RecName: Full=S-ribosylhomocysteine lyase; EC=4.4.1.21; AltName: Full=AI-2 synthesis protein; AltName: Full=Autoinducer-2 production protein LuxS; | chromosome | CDS | 2975442 | 516 | - | 0.515504 |
| ygeV | SSO_3020 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3173703 | 1779 | - | 0.456998 |
| ygiM | SSO_3192 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3355455 | 621 | + | 0.523349 |
| yhdA | SSO_3393 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3574179 | 1941 | - | 0.504894 |
| yhdW | SSO_3409 | putative periplasmic binding transport protein | SubName: Full=Putative periplasmic binding transport protein; | chromosome | CDS | 3592110 | 918 | + | 0.5 |
| yhjB | SSO_3871 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 4079178 | 603 | + | 0.47927 |
| yhjH | SSO_3866 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4071882 | 771 | + | 0.53048 |
| yhjK | SSO_3862 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4065488 | 1956 | + | 0.525051 |
| yihK | SSO_4043 | putative GTP-binding factor | SubName: Full=Putative GTP-binding factor; | chromosome | CDS | 4275322 | 1698 | + | 0.534747 |
| yiiO | SSO_4083 | Uncharacterized periplasmic protein | SubName: Full=Uncharacterized periplasmic protein; | chromosome | CDS | 4319859 | 504 | + | 0.5 |
| yiiT | SSO_4092 | putative regulator | RecName: Full=Universal stress protein; | chromosome | CDS | 4327334 | 429 | + | 0.433566 |
| yjaI | SSO_4175 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4419475 | 567 | - | 0.516755 |
| yjcC | SSO_4241 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4499914 | 1587 | + | 0.446755 |
| yjdG | SSO_4301 | putative 2-component transcriptional regulator | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 4569741 | 720 | - | 0.491667 |
| yjdH | SSO_4302 | putative 2-component sensor protein | SubName: Full=Putative 2-component sensor protein; | chromosome | CDS | 4570457 | 1632 | - | 0.501838 |
| yjiY | SSO_4487 | putative carbon starvation protein | SubName: Full=Putative carbon starvation protein; | chromosome | CDS | 4759352 | 2166 | - | 0.55771 |
| ylaB | SSO_0444 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 469658 | 1161 | - | 0.485788 |
| ylcA | SSO_0522 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 555202 | 684 | - | 0.552632 |
| ynaF | SSO_1749 | putative filament protein | SubName: Full=Putative filament protein; | chromosome | CDS | 1856156 | 507 | + | 0.475345 |
| yojN | SSO_2275 | putative 2-component sensor protein | SubName: Full=Putative 2-component sensor protein; | chromosome | CDS | 2388461 | 2673 | + | 0.493453 |
| yqeH | SSO_3006 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3159793 | 693 | + | 0.37518 |
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