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# Shigella dysenteriae Sd197, Sd197

>SDY_0180 hypothetical protein
MPESRCYFYQDLMLPVLLDSLRGDWQANELARSLARLKAMDNNGLLRRTL
AAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYV
ALQLDEER
>SDY_1050 conserved hypothetical protein
MENQSWLKKLARRLGPGHIVNLCFIVVLLFSTLLTWREVVVLEDAYISSQ
RNHLENVANALDKHLQYNVDKLIFLRNGMREALIAPLDFTSLRDAVTEFE
QHRDEHAWQIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALE
VGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQP
WFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGM
SIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRE
LAFLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFG
SISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRL
YNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVL
SHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNE
KEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRN
RVFASDNT
>SDY_1684 hypothetical protein
MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE
FCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHD
AYKASDERLYVNKQNKNSRS
>SDY_4127 putative histidine kinase
MAHPGRHFFASARGRLLLLNLLVVAVTLMVSGVAVMGFRHASQMQELVQQ
QTVDDMTGSLNLARDTANVATAAVRLSQVVGALEYKGEAERLQETQRALK
SSLAQLANAPLAQQEAGLVTRIITRSNELQTSVGGMLERGQRRHLERNAL
LSSQYQNLSYLRHLQKVTHAQDDILLNEMNRLIVAAIATPAPQAIIHQLV
GVMSALPTHSDTPLVNTLLNDFNRELRKLAPLSAALEQSDLAISWYMFHI
KALVAILNGDINRYAEQVATLSGLRVAQSYQDLRSGERVIMIFALLAVVI
TAFAGWYIYRNLGTNLTAISRAMSRLAHGEADVTFPALQRRDELGELACA
FNVFARNTASLERTSRLLKEKTTQMEIAQTERQGLEEALLHSQKLKAVGQ
LTGGLAHDFNNLLAVIIGSLELVNPDSPDAPRIQRALQAAERGALLTQRL
LAFSRKQSLHPQAVELKTLLEELSELMRHSLPATLALEIEAQPPAWPAWI
DVSQLENAIINLVMNARDAMEGQTGIIKIRTWNQRVTRSSGQRQDMVALE
VIDHGSGMSQAVKSQVFEPFFTTKQTGSGSGLGLSMVYGFVRQSGGRVEI
ESAPGQGTTVRLQLPRALTAAKNLSPAAVEQASVSGDKLVLVLEDEAAVR
QTICEQLHLLGYLTLEASSGEQALDLLAASAEIDIFISDLMLPGGMSGAE
VVNAARKLYPHLTLLLISGQDLRPSHNPALPDVALLRKPFTRAQLAQALG
QIEG
>SDY_1802 conserved hypothetical protein
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIA
QLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLDRDNY
AGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNST
MKAVFDGLFTRVMLDKSFIQQQIMHRSFELFIRAIQAQISPCCNCIIAGG
IDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
>SDY_4134 putative transcriptional regulator
MMRSVTMKPVVLVVDDDTAICALLQDVLSEHVFTVSVCHTGQEAILRIEG
DPDIALVVLDMMLPDTNGLRVLQQIQKLRPTLPVVMLTGMGSKSDVVVGL
EMGADDYICKPFTPRVVVARLKAVLRRVGALAVNDEKSAGLSFNGWYLDT
MRCQLHNPLQQHVELTQGEYGLLLALAQNASRVLSREQLLAFTHSDSVEV
FDRTIDVLIMRLRRKIELNPHQPMLIKTLRGLGYVFAADVH
>SDY_2579 putative sensor protein
MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTA
IFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIH
RYLIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILGGMLCET
LTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEA
SAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITNTD
HVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM
LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRSE
QLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSR
YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC
CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI
DPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYI
PNQRTPVASQATLLL
>SDY_1961 hypothetical protein
MLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ
FHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYR
IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAV
NSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM
PLRDFPKWLAGSQPPPARHNGHITPIMPLR
>SDY_0506 putative response regulator
MIRVVLVDDHVVVRSGFAQLLSLEDDLEVIGQYSSAAQAWSALIRDDVNV
AVIDIAMPDENGLSLLKRLRAQKPQFRAIILSIYDAPTFVQSALDAGASG
YLTKRCGPEELVQAVRSVGLGGHYLCADAIRALRGGGQPAQALEILTPRE
REVFDLLVKGDSVKEIAFKLELSHKTVHVHRANVLGKLNCHSTIELVHFV
LDHHLLAGH
>SDY_3641 putative phosphotransferase system enzyme subunit
MQGIHFQENYIQRLPAGLSVEQIIRQLAQPLVAAELVVPDFADHVLKREA
TYPTGLPTEPPCIAIPHTDHKHVRHNAIAVGILPEPVEFADMGGDPDPVP
VRVIFLLALSESNKQLNALGWIMEMIQDTPFMQALLAMETTEIHTVILNK
MKERGEI
>SDY_4626 conserved hypothetical protein
MLILTIGLPDSKGFLWLANDKNYHMILVIIINERDETMLQRTLGSGWGVL
LPGLLIAGLMYADLSPDQWRIIILMGLVLTPVMLYHKQLRHYVLLPSCLA
LIAGIMLMIMNLKQG
>SDY_1423 conserved hypothetical protein
MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQLRTGPY
SVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEP
VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRD
GQIVDANLASLNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH
KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE
HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND
LYGHSKGDEVLCALARTLESCEVYWQ
>SDY_1420 hypothetical protein
MSVKLRLPHCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK
VSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA
>SDY_1980 conserved hypothetical protein
MLILIGWQFQVRQPSDYIMNKTEFYADLNRDFNALMAGETSFLATLANTS
ALLYERLTDVNWAGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVAR
NQVQRIEDVHAFDGHIACDAASNSEIVLPLVVKNQIIGVLDIDSTVFGRF
TDEDEQGLRQLVAQLEKVLATTDYKKFFASVAG
>SDY_1925 repressor protein CI
MNMKKKPLTPEQLEDAKRLKSIFNAKKKELGLSQESLAYELGVTQSAVSQ
LMAGINAINASHAAQLAKILNVKVGDFSPSLAKSIAEMALAIEEPLTRVP
AYEYPLLSCVQAGAFSMDDISYTAKDAIKWISTTTKASDRSFWLEVKGHS
MTAPQGGKPSFPEGMLILVDPEREIEDGDFCVARMNGDEFTFKRFIRESG
KAYLEPLNPRFDMIECNENCQFVGKVIKSQWNDETFD
>SDY_1629 conserved hypothetical protein
MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIGAELRLVHELSLFWPL
NGVMAGVFARYVWLNRLHYYAISYVAMLVYDVITTEWGLVSLAINFSNMM
FIVTVALLVVRDKRLGRNKYEPVSALRLFNYCLIAALLCAIVGAIGSVSI
DSLDFWPLLADWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIAL
IVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLV
ANSVIDISVGSPFSIPEMFSARLGIATMAICPIMVSFSVAAINSLMKQVA
LRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYG
HECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAE
KIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTC
LYRSKKDGRNRTALCVTVRKLSDIFIHSERFKCNVFYHFMFEEKSYFLN
>SDY_2541 conserved hypothetical protein
MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLV
SPFLRAEQTLEEVGDCLNLPSSAEVLPELMPCGDVGLVSAYLQALTNEGV
ASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQM
SPCNLKMAKAI
>SDY_0507 putative sensor kinase
MSRNLRHWVISLFIVLAWGTGWLMLWTLSFYLTNNGQQAVLFLPQGVYLA
LVILLSRRYWPALVLPPLLMMFWLHSEQLLNGYLMLATPVISLFPALLAQ
NFWHRFPLYWQRLTLLLATVTAASLLNTALLSPFMSGPIMLPGLTSFTGG
VLLTPFVYLIFEFLRQQHRYQLLGLDTHNPPLRTSLIIWCSLFFIIGIGT
QIVLSPEIERLLLIVVFLPNVVMAWKFGWQGGVLSGLLGSMMITIARQIG
VGFSNLVELEIFLATQALLGTGLGIAISRQQHLALNLHHYRQRLEAELAA
RRALAEKLIHTEEDTRKNLARELHDEIGQNITAIQIQSQLVKRARDPAQI
QSAASQINELARRIHLSTRQLLRQLRPPSALCGCHSL
>SDY_4327 aceK, isocitrate dehydrogenase kinase/phosphatase
MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKNR
IHLYDHHVGLVVEQLRCITNGQSTDAEFLLRVKEHYTRLLPDYPRFEIAE
SFFNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFYPEHGWE
ALLMRVLSDLPLRLPWQNKSRDINYIIRHLTETLGPENLSESHLQVANEL
FYRNKAAWLVGKLITPSGTLPFLLPIHQTDDGELFIDTCLTTTAEASIVF
GFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYRE
YLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDRFAPQKEMSA
AHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMELLLQEAAEK
ITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAA
ANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDEL
ASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRTDYWRALQN
RIREGHVEDVYAYRRRQRFSVLYGEMLF
>SDY_3256 aer, aerotaxis sensor receptor, flavoprotein
MSSHPYVTQQNTPLADDTTLMSATDLQSYITHANDTFVQVSGYTLQELQG
QPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWERANAV
PMVREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTGKRIHKGLVVRK
GWLSKLPSLPLRWRARGVMTLMFILLAAMLWFVAAPVVTYILCALVVLLA
SACFEWQIVRPIENVARQALKVATGERNSVEHLNRSDELGLTLRAVGQLG
LMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQTVATMN
QMAASVKQNSATASAADKLSITASNAAVQGGEAMTTEIKTMDDIADSTQR
IGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRS
ANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS
HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLED
AVTVLH
>SDY_0074 apaH, diadenosine tetraphosphatase
MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLR
YVKSLGDSVRLVLGNHDLHLLAVFTGISRNKPKDRLTPLLEAPDADELLN
WLRRQPLLQIDEEKKLVMAHAGITPQWDLPTAKDCARDVEAVLSSDSYPF
FLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESP
EEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWG
GSLTCLRWEDKQYFVQPSNRHKDMGEGEAVAS
>SDY_4662 arcA, negative response regulator of genes in aerobic pathways
MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINL
VIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDY
ITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRS
LIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRT
VDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED
>SDY_3391 arcB, aerobic respiration sensor-response protein
MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQV
ESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRER
DLSLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQL
EQQSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKP
ADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYY
DRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNG
IVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQ
LDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLR
QILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFT
LTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGN
SVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDL
PPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEE
STVTTEENSKSEALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVL
ESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQSPDLPAWEDNV
VEWIEEMKEEWRHDVEVLKAWVAKATKK
>SDY_2509 argT, lysine-, arginine-, ornithine-binding periplasmic protein
MKKLILALSLLVGLSAAASSYAALPETVRIGTDTIYAPFSSKDAKGDFVG
FDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQ
QEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANE
TWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDF
AFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGTYDKMAK
KYFDFNVYGD
>SDY_2405 artI, arginine 3rd transport system periplasmic binding protein
MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIVGFDVDL
AQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLF
TTPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITT
VPYDSYQNAKLDLQNGRIDGVFGDTAVVTEWLKDNPKLEAVGDKVTDKDY
FGTGLGIAVRQGNTELQQKLNTALEKVKKDGTYETIYNKWFQK
>SDY_2186 baeR, transcriptional response regulatory protein
MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYV
RQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGL
EIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRF
QASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRT
IDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRIV
>SDY_2187 baeS, sensor protein for BaeR
MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQR
LQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPP
HGWRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVER
LTRNTDINFDKQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGT
HKLAAGDFTTRVTPTSEDELSKLAQDFNQLASTLEKNQQMRRDFMADISH
ELRTPLAVLRGELEAIQDGVRKFTPETMASLQAEVGTLTKLVDDLHQLSM
SDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITVFGD
RDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFADSAPGVSDD
QLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
VSITVELPLERDLQREV
>SDY_3003 barA, sensor-regulator
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIE
PLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSN
FHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDA
KNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMR
DVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAY
HEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANM
SHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLD
FSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPD
NVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDI
SFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQ
CTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLA
KAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFC
HHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSG
HQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAH
AMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVN
EIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVG
ENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELL
ELLDEMDNVAREASKILG
>SDY_4101 basS, sensor protein for basR
MRFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRD
NRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVCRITRPLAELQK
ELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADV
AHELRTPLAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAG
QSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPESAADITVQGD
ATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDGGAVMAVEDEGPGIDESK
CGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAW
VRLKKDQNVANQI
>SDY_0298 bolA, possible regulator of murein genes
MTSQRCRRRYFMMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHF
KVVLVSDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQ
DTVFASPPCRGAGSIA
>SDY_2999 chpA, probable PemK-like growth inhibitor
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVP
CTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQ
LIKAKINVLIG
>SDY_4461 chpB, probable growth inhibitor, PemK-like, autoregulated
MVKKSEFERGDIVLVGFDPASGHEQQGAGRPALVLSVQAFNQLGMTLVAP
ITQGGNFARYAGFSVPLHCEEGDVHGVVLVNQVRMMDLHARLAKRIGLAA
DEVVEEALLRLQAVVE
>SDY_3000 chpR, PemI-like suppressor of inhibitory function of ChpA
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKE
PVFTLAELVNDITPENLHENIDWGEPKDKEVW
>SDY_4460 chpS, suppressor of inhibitory function of ChpB, PemI-like, autoregulated
MQMRITIKRWGNSAGMVIPNVVMKELNLWPGQSVEAQVSNNQLILTPISR
RYSLDELLAQCDMNAAELSEQDVWGKSTPAGDEIW
>SDY_3143 cmtB, PTS system, mannitol-specific enzyme II component, cryptic
MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDST
INNSPYYILAPGVAMPHARPECGTLKTGMSLTLLEQGVYFPGNDEPIKLL
IGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG
>SDY_3835 cpxA, histidine protein kinase
MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIE
QHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERS
EMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLVRPAS
SSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEV
AQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHEL
RTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQK
NALVSETLKANQLWGEVLDNAAFEAEQMGKSFSVNFPPGPWPLYGNPNAL
ESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIF
RPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
LPLYKRS
>SDY_3834 cpxR, transcriptional regulator in 2-component system
MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLL
DVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPK
PFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASF
DGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMH
ISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS
>SDY_4659 creB, catabolic regulation response regulator
MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQAPDV
MILDVGLPDISGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADD
YVAKPFSPREVCARVRTLLRRVKKFSSPSPVIRIGHFELNEPAAQISWFD
TPLTLTRYEFLLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIK
TLRAKLRAINPDLSPINTHRGMGYSLRGL
>SDY_3519 crp, cyclic AMP receptor protein
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAV
LIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY
KKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLN
LAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAH
GKTIVVYGTR
>SDY_2892 csrA, carbon storage regulator
MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQR
IQAEKSQQSSY
>SDY_0161 dksA, dnaK suppressor protein
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQ
LRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIE
KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA
G
>SDY_3672 envZ, protein histidine kinase/phosphatase sensor for OmpR
MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQQFNKVL
AYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLR
WAQHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLT
EIHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGI
IPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLT
RIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMAD
LNAVLGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAVANMVVNAAR
YGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTIS
GTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
>SDY_4477 evgA, putative positive transcription regulator
MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVI
IDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFV
SKKEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEIS
VMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQR
NKIG
>SDY_4478 evgS, putative sensor for regulator EvgA
MKFLPYIFLLCCGLWSTISFADGDYIEYRGISSNNRVTFDPLRLSNKELR
WLASKKNLVIAVHKSQTATLLHTDSQQRIRGINADYLNLLKRALNIKLTL
REYADHQKAMDALEDGEVDIVLSHLVASPPLNDDIAATNPLIITFPALVT
TLHDSMRPLTSSKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALAS
VSAGQNDYFIGSNIITSSMISRYFTHSLNVVKYYNSPRQYNFLLTRKDSI
VLNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEHEKQWIKQ
HPDLKVLENPYSPPYSMTDEIGSVRGVMGDILNIITLQTGLNFSPITVSH
NIHAGTQLNPGGWDILPAAIYSEDRENNVSFAEAFITTPYVFVMQKAPDS
EQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELD
ALVATQLNSRYMIDHYYPNELYHFLIPGVQNASLSFAFPRGEPELKDIIN
KALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSS
LLWGFYLLRSVRRREVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVIS
HNSAFEHYFTADYYKNEMLPLENSESPFKDVFSNTHEVTAETKENRTIYT
QVFEIDNGIEKRCINHWHTLCNLPASDHAVYICGWQDITETRDLIHALEV
ERNKAINATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEA
ISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFG
AIAASKSIALSCSSTFPEHYLVKLDPQAFKQVLSNLLSNALKFTTEGAVK
ITTSLVHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGS
GLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEITQQVAAVEAKAE
QPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSM
QHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLN
CGMNLCLFKPLTLDVLKTHLSQLHQVAHIVPQYRHLNIEALKNNTANDLQ
LMQEILMTFQHETHKDLPAAFHALEAGDNRTFHQCIHRIHGAANILNLQK
LINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQQND
>SDY_1097 fliY, putative periplasmic binding transport protein
MKLAHLGRQALIGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGT
YPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKR
IDVVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTAADLKGK
KVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLA
ALDLVKKTNDTLAVTGEVFSRQESGVALRKGNEDLLKAVNDAIAEMQKDG
TLQALSEKWFGADVTK
>SDY_1415 fnr, Fnr
MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKK
PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG
FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGE
IKGDQDMILLLSKKNAEERLAAFIYNLSCRFAQRGFSPREFRLTMTRGDI
GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNVA
>SDY_3236 glnE, adenylylating enzyme for glutamine synthetase
MKPLSSPLQQYWQTVVERLPEPLAEESLSAQAKLVLTFSDFVQDSVIAHP
EWLMELESQPPQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVR
IAWAQTLALVTEESILQQLSYLAETLIVAARDWLYDACCREWGTPCNAQG
EAQPLLILGMGKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFT
RMGQRLIKVLDQPTQDGFVYRVDMRLRPFGESGPLVLSFAALEDYYQEQG
RDWERYAMVKARIMGDSEGVYANELRAMLRPFVFRRYIDFSVIQSLRNMK
GMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQLIRGGREPSLQSRSLL
PTLSVIAALHLFSENDAKQLRVAYLFLRRLENLLQSINDEQTQTLPSDEL
NRARLAWAMDFADWPQLTGVLTAHMTNVRRVFNELIGDDESETQEESLSE
QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRG
RQVLDHLMPHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPA
ALKHLISLCAASPMIASQLARYPLLLDELLDPNTLYQPTATDAYRDELRQ
YLLRVPEDDEEQQLEALRQFKQAQLLRIAAADIAGTLPVMKVSDHLTWLA
EAMIDAVVQQAWVQMVARYGKPNHLNEREGRGFAVVGYGKLGGWELGYSS
DLDLIFLHDCPMDAMTDGEREIDVRQFYLRLAQRIMHLFSTRTSSGILYE
VDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQLT
AHFDAVRREIMALPREGKTLQTEVREMREKMRAHLGNKHRDRFDIKADEG
GITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMVL
TRAYTTLRDELHHLALQELPGHVSEDCFTAERDLVRASWQKWLVEE
>SDY_3875 glnG, response regulator for gln
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDV
LLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFD
YLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDV
FRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAI
PKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMPLDVQT
RLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHR
LNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTR
LAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
LLGWGRNTLTRKLKELGME
>SDY_0785 glnH, periplasmic glutamine-binding protein
MKSVLKVSLAALTLAFAVSSHAVDKKLVVATDTAFVPFEFKQGDKYVGFD
VDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKA
IDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANI
KTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNSQFKAVGD
SLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKWFGTEPK
>SDY_3874 glnL, histidine protein kinase sensor for GlnG regulator
MATGTQPDAGQILNSLINSILLIDDNLAIHYANPAAQQLFAQSSRKLFGT
PLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMP
DGMILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRG
AAQLLSKALPDPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIH
KVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVLLNIVRNAL
QALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTL
FYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIRK
>SDY_2508 hisJ, histidine-binding periplasmic protein of high-affinity histidine transport system
MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVG
FDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQ
QEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNE
YWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY
KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAK
KYFDFDVYGG
>SDY_1287 hnr, Hnr protein
MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGF
TPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRL
GVEDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNP
AAAAKLLQELQPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAF
YCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNH
LLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVP
LGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE
>SDY_3722 hydG, sensor HydH response regulator of hydrogenase 3 activity
MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSERQALEQVREQVF
DLVLCDVRMAEMDGIATLKEIKALKPAIPVLIMTAYSSVETAVEALKTGA
LDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVTASQFGMVGKSPAMQH
LLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAA
LNESLLESELFGHEKGAFTGADKRREGHFVEADGGTLFLDEIGDISPMMQ
VRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEANAGRFRQDLYY
RLNVVAIEVPSLRQRREDIPLLAGHFFQRFAERNRKAVKGFTPQAMDLLI
HYDWPGNIRELENAVERAVVLLTGEYISERELPLAIAGTPIPLGQSQDIQ
PLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR
>SDY_3723 hydH, sensor kinase for HydG hydrogenase 3 activity
MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAAARQTLL
EKGSVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQG
TIVMHSNSGMVGKQLYSPQEMQQLHPGDEEVWRRIDSADGEPVLEIYRQF
QPMFAAGMHRMRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFA
LATVLLASVLSFFWYRRYLRSRQLLQDEMKRKEKLVALGHLAAGVAHEIR
NPLSSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKP
THLALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRL
TQVLLNLYLNAIQAIGQHGVISVTASEGGAGVKISVTDSGKGIAADQLEA
IFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVN
ITRKDPQG
>SDY_0629 kdpE, regulator of kdp operon
MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLII
LDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLS
KPFGIGELQARMRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEV
HLTPIEFRLLAVLLNNAEKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLR
QKLEQDPARPSHFITETGIGYRFML
>SDY_4531 lexA, regulator for SOS regulon
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKAL
ARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQV
DPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARID
DEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGD
WL
>SDY_1275 narL, NarL
MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAES
LDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALK
RGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTE
RDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKL
KSRVEAAVWVHQERIF
>SDY_0885 narP, nitrate/nitrite response regulator
MPEATPFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANR
LDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALID
AGADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDP
FSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRS
RVAATILFLQQRGAQ
>SDY_2653 narQ, sensor for nitrate reductase system
MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLR
MQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYA
HLNANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLV
VAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPL
DTSLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHEAKRRLEVL
YQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNP
ELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQ
KHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQS
IMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK
LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDG
NHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTL
VSISFRSAEGEESQLM
>SDY_1276 narX, nitrate/nitrate sensor
MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKA
GSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQ
GLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIE
TVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQR
ANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSF
LWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF
TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQ
GRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHD
SIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT
TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL
QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDDGCGVPENAIRSNH
YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE
>SDY_3671 ompR, response regulator affecting transcription of ompC and ompF
MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFH
LMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGAD
DYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTR
EMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERS
IDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA
>SDY_0338 phoB, positive response regulator for pho regulon
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLI
LLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGAD
DYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMTGE
EPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIR
RLRKALEPGGHDRMVQTVRGTGYRFSTRF
>SDY_2022 phoP, transcriptional regulatory protein
MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIV
DLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVT
KPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKL
TAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKK
IQAQYPQEVITTVRGQGYLFELR
>SDY_2023 phoQ, sensor protein PhoQ
MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFR
LLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQR
DVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQDVREDD
DDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLS
ANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSL
VRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSV
SDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSA
LNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEI
SARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
EITEQYEGKIVAGESMLGGARMEVIFGRQHSTPKDE
>SDY_1979 proQ, activator of ProP osmoprotectant transporter
MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEM
NLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHAR
KQLEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKE
GAERKPRAQKPVEKAPKTAKAPREEQHTPVSDISALTVGQALKVKAGQNA
MDATVLEITKDGVRVQLNSGMSLIVRAEHLVF
>SDY_1940 pspA, phage shock protein
MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARA
LAEKKQLTRRIEQASAREIEWQEKAELALLKDREDLARAALIEKQKLTDL
IKSLEHEVTLVDDTLVRMKKEIGELENKLSETRARQQALMLRHQAANSSR
DVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAEL
KADDAISEQLAQLKAKMKQDNQ
>SDY_1938 pspC, phage shock protein
MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLA
LFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLRE
MERYVTSDTFTLRSRFRQL
>SDY_1941 pspF, psp operon transcriptional activator
MANFIMAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELI
ASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGR
FERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLV
CATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEHFSI
QMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSDY
PLDDIIIDPFKRRPPEEANAVSENTSLPTLPLDLREFQMQQEKELLQLSL
QQGKYNQKHAAELLGLTYHQFRALLKKHQI
>SDY_3385 ptsN, phosphotransferase system enzyme IIA
MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISDLAAKQLSLPPQVV
FEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAID
NQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELY
QIITDTEGTPDEA
>SDY_3046 ptsP, PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins)
MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCY
YLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIP
SVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQM
AAILSQSQLTALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQEYQA
STLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHLLS
DTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAVLSDNYLKERAVDLRA
LGQRLLFHLDDANQGPNAWPERFILVADELSATTLAELPQDRLVGVVVRD
GAANSHAAIMVRALGIPTVMGADIQPSVLHCRTLIVDGYRGELLVDPEPV
LLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTL
DVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATG
NLNILLPMVTSLDEVDEARRLIERAGREVEEMIGYEIPKPRIGIMLEVPS
MVFMLEHLAKRVDFISVGTNDLTQYILAVDRNNTRVANIYDSLHPAMLRA
LAMIAREAEIHGIDLRMCGEMAGDPMCVAILIGLGYRHLSTNGRSVARVK
YLLRRIDFAEAENLAQRSLEAQLATEVRHQVAAFMERRGMGGLIRGGL
>SDY_4364 ptxA, putative PTS system enzyme II A component
MKLRDSLAVNKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYYQAILDG
VEQFGPYFVIAPGLTMPHGRPEEGVKKTGFSLVTLKKPLEFNHDDNDPVD
ILITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRT
NAAA
>SDY_3213 qseC, quorum sensing Escherichia coli regulator C
MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLML
FAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLN
DGDNGEDIPYSYQREGFADGQLVGDKDQWRFVWMTSPDGKYRIVVGQEWE
YREDMALAIVAGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRD
PDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRS
PLTALKVQTEVAQLSDDDPQARKKALLQLHYGIDRATRLVDQLLTLSRLD
SLDNLQDVAESPLEDLLQSSVMDIYHTAQQAKIDVRLTLNVQGIKRTGQP
LLLSLLVRNLLDNAVHYSPQGSVVDVTLNADNFIVRDNGPGVTPEALARI
GERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW
>SDY_0857 rcsB, positive response regulator for colanic capsule biosynthesis
MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA
HVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLD
LDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKR
LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIA
LLNYLSSVTLSPADKD
>SDY_0856 rcsC, sensor for ctr capsule biosynthesis
MFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQRFIQRT
SDVMKELKYIAENRLSAENGVLSPRGRETQADVPAFEPLFADSDCSAMSN
TWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVE
RDTALKALHERINKYRDAPQDDSGSNLYWISEGPHPGVGYFYALTPVYLA
NRLQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKG
DPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLI
LNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNRKIVASA
PVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDV
LTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQA
SQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSS
LLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDY
LSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLIS
MMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNA
SLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVSKKWQGRAVVTFC
RRHIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTD
KAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSK
NHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLE
SGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES
>SDY_3001 relA, (p)ppGpp synthetase I
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHP
DASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVG
KSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVV
IKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELED
YCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVY
GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY
RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELG
VAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQ
VFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQD
RDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGD
IRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVE
GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPE
RIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASR
SDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>SDY_2813 rseA, sigma-E factor, negative regulatory protein
MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEV
LHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQ
LTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSL
GVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQ
AAVQVPGIQTLGTQSQ
>SDY_2812 rseB, regulates activity of sigma-E factor
MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYELSFISI
NKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPF
TLNGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARD
GTRYSYIVWMDTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQT
LAKANLPPLLSVPVGEKAKFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIE
SRLYSDGLFSFSVNVNRATPSSTDQMLRTGRRTVSTSVRDNAEITIVGEL
PPQTAKRIAENIKFGAAQ
>SDY_2811 rseC, sigma-E factor, negative regulatory protein
MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHT
IIVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLF
ASDVAALCGAVLGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRF
ETSSEDASQ
>SDY_1824 rstA, response transcriptional regulatory protein
MNVMNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRENPD
LVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACD
YMPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINR
VVTLANTEISLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRS
VDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE
>SDY_1825 rstB, sensor histidine protein kinase
MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMNSSLYLM
RSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEI
VALDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLA
FPVFIWMRPHWQDMLKLEAAAQRFGDGHLNERIHFDEGSSFERLGIAFNQ
MADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSDNLSAAESQALNR
DISQLEALIEELLTYARLDRPQNELHLSEPDLPLWLSTHLADIQAVTPDK
TVRIKTLMQGHYAALDMRLMERVLDNLLNNALRYCHSTVETSLLLSGNRA
TLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLAIVHSIALA
MGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA
>SDY_0903 rtn, conserved hypothetical protein
MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDV
QKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVK
DKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIW
YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSR
LMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV
GLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR
WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGV
KFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT
QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET
ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP
LPLDDFVRWLKKPYTSQW
>SDY_4082 spoT, (p)ppGpp synthetase II
MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPV
AVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGV
SKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSL
RPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKE
VVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLK
EQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKA
NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTT
AQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVEL
PAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKL
NEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQQGDGSIPP
ATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCR
NIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTT
TSNIQSLNTEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRN
RN
>SDY_1534 spy, Spy
MRKLTALFVASTLALGTANLAHAVDTTTAAPADAKPMMHHKGKFGPHQDM
MFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAK
AEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERP
AAKGKMPATAE
>SDY_0969 torR, response transcriptional regulator for torA
MPHHIVIVEDEPVTQARLQSYFTQEGYTISVTASGAGLREIMQNQPVDLI
LLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYV
TKLLELRELVVRVKNLLWRIDLARQVQPLTQDNCYRFAGYCLNVSRHTLE
RDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVD
VLIRRLRHKLSADLLVTQHGEGYFLAADVC
>SDY_1760 trg, methyl-accepting chemotaxis protein III
MRSARINMIQAGAASRIAEMEAMKRNIAQAESEIKQLQQGYRAYQNRPVK
TPADEALDTELNQRFQAYITGMQPMMKYAKNGMFEAIINHESEQIRPLDN
AYTDILNKAVKIRSTRANQLAELAHQRTRLGGMFMIGAFVLALVMTLITF
MVLRRIVIRPLQHAAQRIEKIASGDLTMNDEPAGRNEIGRLSRHLQQMQH
SLGMTVGTVRQGAEEIYRGTSEISAGNADLSSRTEEQAAAIEQTAASMEQ
LTATVKQNADNAHYASKLAQEASIKASDGGQTVSGVVKTMGAISTSSKKI
SEITAVINSIAFQTNILALNAAVEAARTGEQGRGFAVVASEVRTLASRSA
QAAKEIEGLISESVRLIDLGSDEVATAGKTMSTIVDAVASVTHIMQEIAA
ASDEQSRGITQVSQAISEMDKVTQQNASLVEEASAAAVSLEEQAARLTEA
VDVFRLNKHSVSAEPRGAGEQVSFATV
>SDY_4150 uhpA, response regulator, positive activator of uhpT transcription
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQV
CICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLS
KRCSPDELIVAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLA
QGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW
>SDY_4149 uhpB, sensor histidine protein kinase phosphorylates UhpA
MMKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRL
GLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFVLLMIGSLLTLLPVAL
ISRYRHQRDWRTLLLQGATLTAAALLQSLPWLWHGKESWNALLLTLTGGL
TLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWL
QLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWR
DHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLE
TEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQ
LSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVRHLEW
RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI
EDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRY
V
>SDY_1220 umuD, UmuD
MLFIKPADLREILTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSA
TYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ
LRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
>SDY_3567 uspA, universal stress protein; broad regulatory function?
MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGL
IDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIK
KYDMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE
>SDY_1104 uvrY, putative 2-component transcriptional regulator
MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRANAVDV
VLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAG
YLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASL
SERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVEL
THLAIRHGLCNAETLSSQ
>SDY_4060 waaP, putative LPS biosynthesis enzyme
MVWMVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAGKSY
FLKWHRGTTLKEIIKNLLSLRMPVLGADREWNAIHRLRDVGVDTMYGVAF
GEKGMNPLTRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVA
TMVRDMHAAGINHRDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRV
PRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFAAPLKDILKQEQGLLS
QAEAKATKIRERTIRKSL
>SDY_0179 yaeG, conserved hypothetical protein
MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGR
VVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVC
MTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGID
LNQPRVVAIVEVDSGQLGVDSAMAELPQLQNALTTPERNNLVAIVSLTEM
VVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFSGPGS
IARSYRTAKTTMVVGK
>SDY_0358 yaiC, conserved hypothetical protein
MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFTRRVRLPRAVGLA
GMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIY
NLKTDTVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLM
VVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLA
EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID
HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT
PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLK
SADLALYKAKKAGRNRTEVAA
>SDY_0542 ybdQ, conserved hypothetical protein
MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHR
FAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNEL
AEELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR
>SDY_0592 ybeJ, putative periplasmic binding transport protein
MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESS
VPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIP
LLQNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFAD
LKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAV
AFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMD
DTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDEMKALFKEPNDKA
LN
>SDY_0596 ybeZ, putative ATP-binding protein in pho regulon
MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLG
IEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHL
AIKEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDI
TFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGD
LSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDA
FIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHA
IEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAE
RKREEQEQK
>SDY_0796 ybiI, conserved hypothetical protein
MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGAPIPQAR
REAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
>SDY_0958 yccY, putative phosphatase
MDSNMAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVK
HPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTA
IAPEVRGKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRL
SR
>SDY_1413 ydaA, conserved hypothetical protein
MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTT
LLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGFPIEIKVVWHNRPFEAI
IQEVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPW
PEGGKALVAVNLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPV
TPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFGINENMTHVEKGLP
EEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK
PDQYQTPVELDDEEDD
>SDY_1590 ydeH, conserved hypothetical protein
MIKKTMEIDVILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYG
LCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQD
AHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ
LRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE
TVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAISHSEGHINITVT
AGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV
>SDY_1692 yeaP, conserved hypothetical protein
MQHYFYYIHSKHITSCFIFVDDVLSCLQRLNNQHLPAVSWSCSVSDQIIA
RVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFAR
NSQKMHIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAARNLGIT
TFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKE
ALVEQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIM
IAFIDLDNFKLINDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEF
LVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGIVEVDPET
TDADSALHAADIAMYQEKKHKQKTPFVAHPALHS
>SDY_1192 yecG, putative regulator
MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLA
APMLEDLRSVMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRK
YHFDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD
>SDY_1039 yedW, putative 2-component transcriptional regulator
MNQAVSITYDLWHIIFMKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGR
DGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVD
DRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDS
VSQSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSD
TNTVDVAIRRLRAKVDDPFPVMLPISRTCVFQ
>SDY_2164 yehT, conserved hypothetical protein
MEGRGMIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHK
LRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAINAFEEHA
FDYLLKPIDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRI
YLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQY
LVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL
>SDY_2163 yehU, putative 2-component sensor protein
MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVF
SIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRY
SMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVA
EMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKREM
FEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAI
TDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCS
LHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQL
LSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSE
QASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHL
MLEIEDNAGLYQPVTNASGLGMNLVDKRLRELFGDDYGISVACEPDSYTR
ITLRLPWRDEV
>SDY_2099 yeiL, putative transcriptional regulator
MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRSRLY
ATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKH
YRPLLLNDTLFLRKLCVSLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQ
EGDLYHEKHTQAAEYLGVSYRHLLYVLAQFVHDGLLIKSKKGYLIKNRKQ
LSGLALEMDPENKFSGMMQ
>SDY_2744 yfhA, putative 2-component transcriptional regulator
MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKV
DLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGV
FSFLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQA
RLVAQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQL
LESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLR
VLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLYYRLNVV
SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLITASWP
GNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFEL
NYLCKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE
>SDY_2746 yfhK, putative 2-component sensor protein
MLYLNFPSVSIRLFASDESNTLKRWPVFPRSLRQLVMLAFLLILLPLLVL
AWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLD
DPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLNNLAQLQCNNS
GPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQS
LVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSEL
RSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQV
VGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAP
LVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHY
GAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKG
AVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK
>SDY_2778 yfiN, conserved hypothetical protein
MANARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNIT
DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAQNA
QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFIDGDNFKYI
NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE
VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADH
NMYQAKHQRAEKLVR
>SDY_2906 ygaA, putative 2-component transcriptional regulator
MSSQNDYQSNGRYDNIYSQIDSEAKMSFSVDVLANIAIELQRGIGHQDRF
QRLITTLRQVLECDASALLRYDLRQFIPLAIDGLAKDVLGRRFALEGHPR
LEAIARAGDVVRFPADSGLPDPYDGLIPGQESLKVHACVGLPLFAGQNLI
GALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGD
AAPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVA
KAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKF
EMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLA
ATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQ
CRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARATRNGD
EVILEAQHFAFPEVTLPPPEAAAVPVVKQNLREATEAFQRETIRQALAQN
HHNWAACARMLETDVANLHRLAKRLGLKD
>SDY_2884 ygaG, conserved hypothetical protein
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPE
RGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRV
ADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERD
VRINSNEELALPKEKLQELHI
>SDY_3238 ygiM, conserved hypothetical protein
MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTV
NAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLCSRVPDLEN
QVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIV
AQKKVDAASVQLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKR
KDRWMN
>SDY_3214 ygiX, putative 2-component transcriptional regulator
MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVIL
DLTLPGMDGRDILREWREKGQREPVLILTARDALEERVEGLRLGADDYLC
KPFALIEVAARLEALMRRTNGQTSNELRHGNVMLDPGKRIATLAGEPLTL
KPKEFALLELLMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRK
LGSDFIRTVHGIGYTLGEK
>SDY_3427 yhdA, conserved hypothetical protein
MRLTTKFSAFVTLLTGLTIFVTFLGCSLSFYNAIQYKFSHRVQAVATAID
THLVSNDFSALRPQITELMVSADIVRVDLLHGDKQVYTLARNGSYRPVGT
SDLFRELSIPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIILM
LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPTTSSALD
TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQE
KVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL
LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIG
ICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR
TLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRD
TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL
TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV
YATGVRSRSGWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV
>SDY_3445 yhdW, putative periplasmic binding transport protein
MQCGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDNTKVKYTPLTA
KERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKA
GLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKA
LESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDD
EWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGK
DLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY
APPVR
>SDY_3539 yhiE, conserved hypothetical protein
MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKLIIDTYHN
HILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLE
ITYGKHLPHKNSELCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ
KFNIMYKLKLRRMSDIVTLGITSYF
>SDY_4545 yhjH, conserved hypothetical protein
MMIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVEL
LTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHG
LLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASM
CEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFS
QLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN
TAVLAL
>SDY_4549 yhjK, conserved hypothetical protein
MAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAI
LKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVT
RLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVT
IYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRL
HQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLE
QVVARKQTTALMIITCETLRDTAGVLQEAQREILLLTLVEKLKSVLSPRM
ILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS
IGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLT
EESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG
LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIILPLSVNLSALQLMHP
NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRV
ALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLA
QSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE
K
>SDY_3872 yihK, putative GTP-binding factor
MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEK
ERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVD
AFDGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVN
LDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVD
LDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAK
VGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPAL
SVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEET
EDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPY
ENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
FRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFA
LFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASG
TDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRA
NRAPKDD
>SDY_3833 yiiO, Uncharacterized periplasmic protein
MMRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSHMFDGI
SLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQA
EKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQW
QKSSSLKLLSSSNSRSQ
>SDY_3821 yiiT, putative regulator
MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGI
YFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQ
KEQCDLLVCGHHHSFINRLMPAYRGMINKLSADLLIVPFIDK
>SDY_3724 yjaI, conserved hypothetical protein
MSKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKR
NTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHN
DFYAQISALQQKLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDE
LRVKRDIAMAEAGIPRGAGMGYGGCGGGGHMGMGHW
>SDY_4237 yjdG, putative 2-component transcriptional regulator
MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPI
DLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGA
VDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQ
DPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLI
WLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
>SDY_4238 yjdH, putative 2-component sensor protein
MRHSLPYRMLRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQISDMTRD
GLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVV
TDMQSLRYSHPEAQRIGQPFKGDDILKALNGEENVAINRGFLAQALRVFT
PIYDENHKQIGVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCI
LVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDDRGEVTLINDA
AQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRL
LLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHE
FMNKLHVILGLLHLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGF
LISKINRATDLGHTLILNSESQLPDSGSEDQVATLITTLGNLIENALEAL
GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSER
GVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR
>SDY_4607 yjiY, putative carbon starvation protein
MPGFTMDTKKIFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASVS
VYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHF
AAIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRN
GASLGEMIKEEMGPVPGTIALFGCFLIMIIILAVLALIVVKALAESPWGV
FTVCSTVPIALFMGIYMRFIRPGRVGEVSVIGIVLLVASIYFGGVIAHDP
YWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVG
LALGIMVLNPELKMPAMTQYIDGTGPLWKGALFPFLFITIACGAVSGFHA
LISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLYFAM
NTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPE
QILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGIL
FEALFILTALDAGTRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVG
LWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTQ
YIWVTVVPAVWLLICTTWALGLKLFSTNPQMEGFFYMASQYKEKIANGTD
LTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYGFKTWLKVRNSDKR
TDKETPYVPIPEGGVKISSHH
>SDY_0393 ylaB, conserved hypothetical protein
MEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYR
VWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN
AYNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITW
ASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAI
ENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG
LSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESTVLTSEKIPQLLREM
INHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYS
SLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIET
SKQEEWLRQHGVHYGQGWLYSKTLPKEDFLRWAEQHL
>SDY_1458 ynaF, putative filament protein
MNSVITQKVSSGVTLYADTKTGGFMNRTILVPIDISDSELTQRVISHVEA
EAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEII
KKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLG
SNAAAVVRHAECSVLVVR
>SDY_0858 yojN, putative 2-component sensor protein
MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKS
YQIVDITHAIQKRVDTWRYVTWQIYDNIAATTSPSYGEGLQETRLKQDVY
YLEKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNG
QDNSLVLISTLPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFS
NVRRLAWQNGRYFTLRTTFNQPGHLATVVAFDLPINDLIPPGMPLDSFRL
EPNATATGNNDNEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGT
LLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTESLPNTAVNNEL
RILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTM
AEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ
AQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQAD
VLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQ
LLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESS
EDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQL
ARKLGGHLNIKTRDGLGTRYSVHIKMLAADPEVEEEEERLLDDVCVMVDV
TSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLTASGLLL
SDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLGGD
ENAQLHASGYYALFVDTVPDDVKRLYTEVATSDFAALAQTAHRLKGVFAM
LNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL