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2024-05-21 11:03:24

Gene list

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COG category: Signal transduction mechanisms
Organism: Shigella dysenteriae Sd197, Sd197

Number of genes found: 128

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Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SDY_4626 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4333122 348 + 0.448276
NA SDY_4127 putative histidine kinaseSubName: Full=Putative histidine kinase; chromosome CDS3859899 2265 - 0.577925
NA SDY_3641 putative phosphotransferase system enzyme subunitSubName: Full=Putative phosphotransferase system enzyme subunit; chromosome CDS3372900 474 + 0.489451
NA SDY_1420 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1311416 300 - 0.506667
NA SDY_1629 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1488678 1500 - 0.480667
NA SDY_2579 putative sensor proteinSubName: Full=Putative sensor protein; chromosome CDS2375899 1698 + 0.511779
NA SDY_1925 repressor protein CISubName: Full=Repressor protein CI; chromosome CDS1753498 714 + 0.477591
NA SDY_1423 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1312936 981 - 0.469929
NA SDY_1980 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1800127 552 - 0.481884
NA SDY_2541 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2337298 486 - 0.530864
NA SDY_0506 putative response regulatorSubName: Full=Putative response regulator; chromosome CDS490678 630 + 0.536508
NA SDY_1050 conserved hypothetical proteinRecName: Full=Cellulose synthesis regulatory protein; chromosome CDS988003 1677 + 0.514609
NA SDY_1961 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1783218 693 + 0.506494
NA SDY_0507 putative sensor kinaseSubName: Full=Putative sensor kinase; chromosome CDS491307 1164 + 0.544674
NA SDY_1684 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1543799 363 + 0.435262
NA SDY_0180 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS184270 327 + 0.51682
NA SDY_1802 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1640375 714 - 0.421569
NA SDY_4134 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS3868318 726 - 0.545455
aceK SDY_4327 isocitrate dehydrogenase kinase/phosphataseRecName: Full=Isocitrate dehydrogenase kinase/phosphatase; Short=IDH kinase/phosphatase; Short=IDHK/P; EC=2.7.11.5; EC=3.1.3.-; chromosome CDS4056062 1737 - 0.5308
aer SDY_3256 aerotaxis sensor receptor, flavoproteinSubName: Full=Aerotaxis sensor receptor, flavoprotein; chromosome CDS3017813 1521 - 0.549638
apaH SDY_0074 diadenosine tetraphosphataseRecName: Full=Bis(5-nucleosyl)-tetraphosphatase, symmetrical; EC=3.6.1.41; AltName: Full=Ap4A hydrolase; AltName: Full=Diadenosine 5,5-P1,P4-tetraphosphate pyrophosphohydrolase; AltName: Full=Diadenosine tetraphosphatase; chromosome CDS69496 849 - 0.548881
arcA SDY_4662 negative response regulator of genes in aerobic pathwaysSubName: Full=Negative response regulator of genes in aerobic pathways; chromosome CDS4367170 717 - 0.511855
arcB SDY_3391 aerobic respiration sensor-response proteinSubName: Full=Aerobic respiration sensor-response protein; chromosome CDS3141938 2337 - 0.506205
argT SDY_2509 lysine-, arginine-, ornithine-binding periplasmic proteinSubName: Full=Lysine-, arginine-, ornithine-binding periplasmic protein; chromosome CDS2307515 783 - 0.503193
artI SDY_2405 arginine 3rd transport system periplasmic binding proteinSubName: Full=Arginine 3rd transport system periplasmic binding protein; chromosome CDS2208749 732 + 0.498634
baeR SDY_2186 transcriptional response regulatory proteinSubName: Full=Transcriptional response regulatory protein; chromosome CDS1984338 723 - 0.536653
baeS SDY_2187 sensor protein for BaeRSubName: Full=Sensor protein for BaeR; chromosome CDS1985057 1404 - 0.541311
barA SDY_3003 sensor-regulatorSubName: Full=Sensor-regulator; chromosome CDS2771032 2757 + 0.49728
basS SDY_4101 sensor protein for basRSubName: Full=Sensor protein for basR; chromosome CDS3838799 1092 + 0.545788
bolA SDY_0298 possible regulator of murein genesSubName: Full=Possible regulator of murein genes; chromosome CDS291457 351 - 0.481481
chpA SDY_2999 probable PemK-like growth inhibitorSubName: Full=Probable PemK-like growth inhibitor; chromosome CDS2766731 336 - 0.470238
chpB SDY_4461 probable growth inhibitor, PemK-like, autoregulatedSubName: Full=Probable growth inhibitor, PemK-like, autoregulated; chromosome CDS4176288 351 + 0.535613
chpR SDY_3000 PemI-like suppressor of inhibitory function of ChpASubName: Full=PemI-like suppressor of inhibitory function of ChpA; chromosome CDS2767066 249 - 0.481928
chpS SDY_4460 suppressor of inhibitory function of ChpB, PemI-like, autoregulatedSubName: Full=Suppressor of inhibitory function of ChpB, PemI-like, autoregulated; chromosome CDS4176037 258 + 0.503876
cmtB SDY_3143 PTS system, mannitol-specific enzyme II component, crypticSubName: Full=PTS system, mannitol-specific enzyme II component, cryptic; chromosome CDS2912628 444 + 0.418919
cpxA SDY_3835 histidine protein kinaseSubName: Full=Histidine protein kinase; chromosome CDS3567271 1374 + 0.540029
cpxR SDY_3834 transcriptional regulator in 2-component systemSubName: Full=Transcriptional regulator in 2-component system; chromosome CDS3566576 699 + 0.519313
creB SDY_4659 catabolic regulation response regulatorSubName: Full=Catabolic regulation response regulator; chromosome CDS4363588 690 + 0.550725
crp SDY_3519 cyclic AMP receptor proteinSubName: Full=Cyclic AMP receptor protein; chromosome CDS3253162 633 + 0.496051
csrA SDY_2892 carbon storage regulatorRecName: Full=Carbon storage regulator; chromosome CDS2672733 186 - 0.494624
dksA SDY_0161 dnaK suppressor proteinRecName: Full=RNA polymerase-binding transcription factor DksA; chromosome CDS160478 456 - 0.524123
envZ SDY_3672 protein histidine kinase/phosphatase sensor for OmpRSubName: Full=Protein histidine kinase/phosphatase sensor for OmpR; chromosome CDS3403519 1353 + 0.569106
evgA SDY_4477 putative positive transcription regulatorSubName: Full=Putative positive transcription regulator; chromosome CDS4191566 615 + 0.396748
evgS SDY_4478 putative sensor for regulator EvgASubName: Full=Putative sensor for regulator EvgA; chromosome CDS4192185 3594 + 0.407624
fliY SDY_1097 putative periplasmic binding transport proteinSubName: Full=Putative periplasmic binding transport protein; chromosome CDS1023942 801 + 0.49563
fnr SDY_1415 FnrSubName: Full=Fnr; chromosome CDS1307364 753 - 0.513944
glnE SDY_3236 adenylylating enzyme for glutamine synthetaseRecName: Full=Glutamate-ammonia-ligase adenylyltransferase; EC=2.7.7.42; AltName: Full=Glutamine-synthetase adenylyltransferase; Short=ATase; AltName: Full=[Glutamate--ammonia-ligase] adenylyltransferase; chromosome CDS2996917 2841 - 0.56107
glnG SDY_3875 response regulator for glnSubName: Full=Response regulator for gln; chromosome CDS3603859 1410 + 0.564539
glnH SDY_0785 periplasmic glutamine-binding proteinSubName: Full=Periplasmic glutamine-binding protein; chromosome CDS732583 747 + 0.484605
glnL SDY_3874 histidine protein kinase sensor for GlnG regulatorSubName: Full=Histidine protein kinase sensor for GlnG regulator; chromosome CDS3602798 1050 + 0.544762
hisJ SDY_2508 histidine-binding periplasmic protein of high-affinity histidine transport systemSubName: Full=Histidine-binding periplasmic protein of high-affinity histidine transport system; chromosome CDS2306512 783 - 0.48659
hnr SDY_1287 Hnr proteinRecName: Full=Regulator of RpoS; chromosome CDS1192028 1014 + 0.489152
hydG SDY_3722 sensor HydH response regulator of hydrogenase 3 activitySubName: Full=Sensor HydH response regulator of hydrogenase 3 activity; chromosome CDS3453286 1326 - 0.564103
hydH SDY_3723 sensor kinase for HydG hydrogenase 3 activitySubName: Full=Sensor kinase for HydG hydrogenase 3 activity; chromosome CDS3454608 1377 - 0.54321
kdpE SDY_0629 regulator of kdp operonSubName: Full=Regulator of kdp operon; chromosome CDS590523 678 - 0.564897
lexA SDY_4531 regulator for SOS regulonRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS4238458 609 - 0.522168
narL SDY_1275 NarLSubName: Full=NarL; chromosome CDS1177738 651 - 0.519201
narP SDY_0885 nitrate/nitrite response regulatorSubName: Full=Nitrate/nitrite response regulator; chromosome CDS832813 648 - 0.521605
narQ SDY_2653 sensor for nitrate reductase systemSubName: Full=Sensor for nitrate reductase system; chromosome CDS2444574 1701 + 0.513815
narX SDY_1276 nitrate/nitrate sensorSubName: Full=Nitrate/nitrate sensor; chromosome CDS1178381 1797 - 0.535337
ompR SDY_3671 response regulator affecting transcription of ompC and ompFSubName: Full=Response regulator affecting transcription of ompC and ompF; chromosome CDS3402803 720 + 0.551389
phoB SDY_0338 positive response regulator for pho regulonSubName: Full=Positive response regulator for pho regulon; chromosome CDS326751 690 - 0.542029
phoP SDY_2022 transcriptional regulatory proteinSubName: Full=Transcriptional regulatory protein; chromosome CDS1830819 672 + 0.471726
phoQ SDY_2023 sensor protein PhoQSubName: Full=Sensor protein PhoQ; chromosome CDS1831490 1461 + 0.511294
proQ SDY_1979 activator of ProP osmoprotectant transporterRecName: Full=ProP effector; chromosome CDS1799332 699 - 0.532189
pspA SDY_1940 phage shock proteinSubName: Full=Phage shock protein; chromosome CDS1763102 669 - 0.493274
pspC SDY_1938 phage shock proteinSubName: Full=Phage shock protein; chromosome CDS1762465 360 - 0.494444
pspF SDY_1941 psp operon transcriptional activatorSubName: Full=Psp operon transcriptional activator; chromosome CDS1763922 993 + 0.513595
ptsN SDY_3385 phosphotransferase system enzyme IIASubName: Full=Phosphotransferase system enzyme IIA; chromosome CDS3137827 492 + 0.514228
ptsP SDY_3046 PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins)SubName: Full=PTS system, enzyme I, transcriptional regulator (With NPR and NTR proteins); chromosome CDS2822818 2247 - 0.538051
ptxA SDY_4364 putative PTS system enzyme II A componentRecName: Full=Ascorbate-specific phosphotransferase enzyme IIA component; EC=2.7.1.-; AltName: Full=PTS system ascorbate-specific EIIA component; chromosome CDS4089288 465 + 0.541936
qseC SDY_3213 quorum sensing Escherichia coli regulator CSubName: Full=Quorum sensing Escherichia coli regulator C; chromosome CDS2975119 1350 - 0.523704
rcsB SDY_0857 positive response regulator for colanic capsule biosynthesisSubName: Full=Positive response regulator for colanic capsule biosynthesis; chromosome CDS805406 651 - 0.474654
rcsC SDY_0856 sensor for ctr capsule biosynthesisSubName: Full=Sensor for ctr capsule biosynthesis; chromosome CDS802405 2802 + 0.509993
relA SDY_3001 (p)ppGpp synthetase ISubName: Full=(P)ppGpp synthetase I; chromosome CDS2767392 2235 - 0.536465
rseA SDY_2813 sigma-E factor, negative regulatory proteinRecName: Full=Anti-sigma-E factor RseA; AltName: Full=Regulator of SigE; AltName: Full=Sigma-E anti-sigma factor RseA; AltName: Full=Sigma-E factor negative regulatory protein; chromosome CDS2603595 651 - 0.519201
rseB SDY_2812 regulates activity of sigma-E factorSubName: Full=Regulates activity of sigma-E factor; chromosome CDS2602639 957 - 0.506792
rseC SDY_2811 sigma-E factor, negative regulatory proteinSubName: Full=Sigma-E factor, negative regulatory protein; chromosome CDS2602163 480 - 0.552083
rstA SDY_1824 response transcriptional regulatory proteinSubName: Full=Response transcriptional regulatory protein; chromosome CDS1658219 717 + 0.492329
rstB SDY_1825 sensor histidine protein kinaseSubName: Full=Sensor histidine protein kinase; chromosome CDS1658939 1302 + 0.506144
rtn SDY_0903 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS852029 1557 - 0.506744
spoT SDY_4082 (p)ppGpp synthetase IISubName: Full=(P)ppGpp synthetase II; chromosome CDS3815922 2109 + 0.539592
spy SDY_1534 SpySubName: Full=Spy; chromosome CDS1406110 486 + 0.506173
torR SDY_0969 response transcriptional regulator for torASubName: Full=Response transcriptional regulator for torA; chromosome CDS918513 693 - 0.526696
trg SDY_1760 methyl-accepting chemotaxis protein IIISubName: Full=Methyl-accepting chemotaxis protein III; chromosome CDS1600836 1434 - 0.51325
uhpA SDY_4150 response regulator, positive activator of uhpT transcriptionSubName: Full=Response regulator, positive activator of uhpT transcription; chromosome CDS3884216 591 - 0.571912
uhpB SDY_4149 sensor histidine protein kinase phosphorylates UhpASubName: Full=Sensor histidine protein kinase phosphorylates UhpA; chromosome CDS3882714 1506 - 0.569721
umuD SDY_1220 UmuDSubName: Full=UmuD; chromosome CDS1125536 420 + 0.480952
uspA SDY_3567 universal stress protein; broad regulatory function?RecName: Full=Universal stress protein; chromosome CDS3303167 435 - 0.494253
uvrY SDY_1104 putative 2-component transcriptional regulatorSubName: Full=Putative 2-component transcriptional regulator; chromosome CDS1029742 657 + 0.500761
waaP SDY_4060 putative LPS biosynthesis enzymeSubName: Full=Putative LPS biosynthesis enzyme; chromosome CDS3797427 807 - 0.477076
yaeG SDY_0179 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS183466 801 + 0.534332
yaiC SDY_0358 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS345972 1116 - 0.536738
ybdQ SDY_0542 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS527960 429 - 0.498834
ybeJ SDY_0592 putative periplasmic binding transport proteinSubName: Full=Putative periplasmic binding transport protein; chromosome CDS561524 909 - 0.489549
ybeZ SDY_0596 putative ATP-binding protein in pho regulonSubName: Full=Putative ATP-binding protein in pho regulon; chromosome CDS565824 1080 - 0.542593
ybiI SDY_0796 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS744199 267 + 0.513109
yccY SDY_0958 putative phosphataseSubName: Full=Putative phosphatase; chromosome CDS906885 459 - 0.51634
ydaA SDY_1413 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1305488 951 - 0.500526
ydeH SDY_1590 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1454872 891 + 0.445567
yeaP SDY_1692 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1548216 1155 + 0.468398
yecG SDY_1192 putative regulatorRecName: Full=Universal stress protein; chromosome CDS1104628 429 + 0.452214
yedW SDY_1039 putative 2-component transcriptional regulatorSubName: Full=Putative 2-component transcriptional regulator; chromosome CDS981021 699 + 0.430615
yehT SDY_2164 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1963682 735 + 0.497959
yehU SDY_2163 putative 2-component sensor proteinSubName: Full=Putative 2-component sensor protein; chromosome CDS1962015 1686 + 0.510083
yeiL SDY_2099 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS1904733 660 - 0.445455
yfhA SDY_2744 putative 2-component transcriptional regulatorSubName: Full=Putative 2-component transcriptional regulator; chromosome CDS2541340 1335 - 0.545318
yfhK SDY_2746 putative 2-component sensor proteinSubName: Full=Putative 2-component sensor protein; chromosome CDS2543542 1491 - 0.523139
yfiN SDY_2778 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2574436 798 + 0.487469
ygaA SDY_2906 putative 2-component transcriptional regulatorRecName: Full=Anaerobic nitric oxide reductase transcription regulator NorR; chromosome CDS2685497 1590 - 0.561006
ygaG SDY_2884 conserved hypothetical proteinRecName: Full=S-ribosylhomocysteine lyase; EC=4.4.1.21; AltName: Full=AI-2 synthesis protein; AltName: Full=Autoinducer-2 production protein LuxS; chromosome CDS2668266 516 - 0.517442
ygiM SDY_3238 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3001323 621 + 0.521739
ygiX SDY_3214 putative 2-component transcriptional regulatorSubName: Full=Putative 2-component transcriptional regulator; chromosome CDS2976465 660 - 0.516667
yhdA SDY_3427 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3185131 1941 - 0.501803
yhdW SDY_3445 putative periplasmic binding transport proteinSubName: Full=Putative periplasmic binding transport protein; chromosome CDS3201757 918 + 0.486928
yhiE SDY_3539 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3276325 528 - 0.327652
yhjH SDY_4545 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4253161 771 - 0.522698
yhjK SDY_4549 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4258371 1956 - 0.521472
yihK SDY_3872 putative GTP-binding factorSubName: Full=Putative GTP-binding factor; chromosome CDS3599019 1824 - 0.533991
yiiO SDY_3833 Uncharacterized periplasmic proteinSubName: Full=Uncharacterized periplasmic protein; chromosome CDS3565926 504 - 0.501984
yiiT SDY_3821 putative regulatorRecName: Full=Universal stress protein; chromosome CDS3556976 429 - 0.433566
yjaI SDY_3724 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3456081 561 + 0.511586
yjdG SDY_4237 putative 2-component transcriptional regulatorRecName: Full=Transcriptional regulatory protein; chromosome CDS3969054 720 - 0.495833
yjdH SDY_4238 putative 2-component sensor proteinSubName: Full=Putative 2-component sensor protein; chromosome CDS3969770 1632 - 0.501225
yjiY SDY_4607 putative carbon starvation proteinSubName: Full=Putative carbon starvation protein; chromosome CDS4315423 2166 - 0.560018
ylaB SDY_0393 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS377347 1314 - 0.47032
ynaF SDY_1458 putative filament proteinSubName: Full=Putative filament protein; chromosome CDS1338033 507 - 0.469428
yojN SDY_0858 putative 2-component sensor proteinSubName: Full=Putative 2-component sensor protein; chromosome CDS806073 2673 - 0.493453