Gene list
Applied filters:
COG category: Signal transduction mechanisms
Organism: Shigella dysenteriae Sd197, Sd197
Number of genes found: 128
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella dysenteriae Sd197, Sd197 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SDY_4134 | putative transcriptional regulator | chromosome | CDS | 3868318 | 726 | - | 0.545455 |
NA | SDY_1802 | conserved hypothetical protein | chromosome | CDS | 1640375 | 714 | - | 0.421569 |
NA | SDY_0507 | putative sensor kinase | chromosome | CDS | 491307 | 1164 | + | 0.544674 |
NA | SDY_1050 | conserved hypothetical protein | chromosome | CDS | 988003 | 1677 | + | 0.514609 |
NA | SDY_1420 | hypothetical protein | chromosome | CDS | 1311416 | 300 | - | 0.506667 |
NA | SDY_4626 | conserved hypothetical protein | chromosome | CDS | 4333122 | 348 | + | 0.448276 |
NA | SDY_2579 | putative sensor protein | chromosome | CDS | 2375899 | 1698 | + | 0.511779 |
NA | SDY_1925 | repressor protein CI | chromosome | CDS | 1753498 | 714 | + | 0.477591 |
NA | SDY_1629 | conserved hypothetical protein | chromosome | CDS | 1488678 | 1500 | - | 0.480667 |
NA | SDY_0180 | hypothetical protein | chromosome | CDS | 184270 | 327 | + | 0.51682 |
NA | SDY_1423 | conserved hypothetical protein | chromosome | CDS | 1312936 | 981 | - | 0.469929 |
NA | SDY_2541 | conserved hypothetical protein | chromosome | CDS | 2337298 | 486 | - | 0.530864 |
NA | SDY_1980 | conserved hypothetical protein | chromosome | CDS | 1800127 | 552 | - | 0.481884 |
NA | SDY_3641 | putative phosphotransferase system enzyme subunit | chromosome | CDS | 3372900 | 474 | + | 0.489451 |
NA | SDY_1961 | hypothetical protein | chromosome | CDS | 1783218 | 693 | + | 0.506494 |
NA | SDY_1684 | hypothetical protein | chromosome | CDS | 1543799 | 363 | + | 0.435262 |
NA | SDY_0506 | putative response regulator | chromosome | CDS | 490678 | 630 | + | 0.536508 |
NA | SDY_4127 | putative histidine kinase | chromosome | CDS | 3859899 | 2265 | - | 0.577925 |
aceK | SDY_4327 | isocitrate dehydrogenase kinase/phosphatase | chromosome | CDS | 4056062 | 1737 | - | 0.5308 |
aer | SDY_3256 | aerotaxis sensor receptor, flavoprotein | chromosome | CDS | 3017813 | 1521 | - | 0.549638 |
apaH | SDY_0074 | diadenosine tetraphosphatase | chromosome | CDS | 69496 | 849 | - | 0.548881 |
arcA | SDY_4662 | negative response regulator of genes in aerobic pathways | chromosome | CDS | 4367170 | 717 | - | 0.511855 |
arcB | SDY_3391 | aerobic respiration sensor-response protein | chromosome | CDS | 3141938 | 2337 | - | 0.506205 |
argT | SDY_2509 | lysine-, arginine-, ornithine-binding periplasmic protein | chromosome | CDS | 2307515 | 783 | - | 0.503193 |
artI | SDY_2405 | arginine 3rd transport system periplasmic binding protein | chromosome | CDS | 2208749 | 732 | + | 0.498634 |
baeR | SDY_2186 | transcriptional response regulatory protein | chromosome | CDS | 1984338 | 723 | - | 0.536653 |
baeS | SDY_2187 | sensor protein for BaeR | chromosome | CDS | 1985057 | 1404 | - | 0.541311 |
barA | SDY_3003 | sensor-regulator | chromosome | CDS | 2771032 | 2757 | + | 0.49728 |
basS | SDY_4101 | sensor protein for basR | chromosome | CDS | 3838799 | 1092 | + | 0.545788 |
bolA | SDY_0298 | possible regulator of murein genes | chromosome | CDS | 291457 | 351 | - | 0.481481 |
chpA | SDY_2999 | probable PemK-like growth inhibitor | chromosome | CDS | 2766731 | 336 | - | 0.470238 |
chpB | SDY_4461 | probable growth inhibitor, PemK-like, autoregulated | chromosome | CDS | 4176288 | 351 | + | 0.535613 |
chpR | SDY_3000 | PemI-like suppressor of inhibitory function of ChpA | chromosome | CDS | 2767066 | 249 | - | 0.481928 |
chpS | SDY_4460 | suppressor of inhibitory function of ChpB, PemI-like, autoregulated | chromosome | CDS | 4176037 | 258 | + | 0.503876 |
cmtB | SDY_3143 | PTS system, mannitol-specific enzyme II component, cryptic | chromosome | CDS | 2912628 | 444 | + | 0.418919 |
cpxA | SDY_3835 | histidine protein kinase | chromosome | CDS | 3567271 | 1374 | + | 0.540029 |
cpxR | SDY_3834 | transcriptional regulator in 2-component system | chromosome | CDS | 3566576 | 699 | + | 0.519313 |
creB | SDY_4659 | catabolic regulation response regulator | chromosome | CDS | 4363588 | 690 | + | 0.550725 |
crp | SDY_3519 | cyclic AMP receptor protein | chromosome | CDS | 3253162 | 633 | + | 0.496051 |
csrA | SDY_2892 | carbon storage regulator | chromosome | CDS | 2672733 | 186 | - | 0.494624 |
dksA | SDY_0161 | dnaK suppressor protein | chromosome | CDS | 160478 | 456 | - | 0.524123 |
envZ | SDY_3672 | protein histidine kinase/phosphatase sensor for OmpR | chromosome | CDS | 3403519 | 1353 | + | 0.569106 |
evgA | SDY_4477 | putative positive transcription regulator | chromosome | CDS | 4191566 | 615 | + | 0.396748 |
evgS | SDY_4478 | putative sensor for regulator EvgA | chromosome | CDS | 4192185 | 3594 | + | 0.407624 |
fliY | SDY_1097 | putative periplasmic binding transport protein | chromosome | CDS | 1023942 | 801 | + | 0.49563 |
fnr | SDY_1415 | Fnr | chromosome | CDS | 1307364 | 753 | - | 0.513944 |
glnE | SDY_3236 | adenylylating enzyme for glutamine synthetase | chromosome | CDS | 2996917 | 2841 | - | 0.56107 |
glnG | SDY_3875 | response regulator for gln | chromosome | CDS | 3603859 | 1410 | + | 0.564539 |
glnH | SDY_0785 | periplasmic glutamine-binding protein | chromosome | CDS | 732583 | 747 | + | 0.484605 |
glnL | SDY_3874 | histidine protein kinase sensor for GlnG regulator | chromosome | CDS | 3602798 | 1050 | + | 0.544762 |
hisJ | SDY_2508 | histidine-binding periplasmic protein of high-affinity histidine transport system | chromosome | CDS | 2306512 | 783 | - | 0.48659 |
hnr | SDY_1287 | Hnr protein | chromosome | CDS | 1192028 | 1014 | + | 0.489152 |
hydG | SDY_3722 | sensor HydH response regulator of hydrogenase 3 activity | chromosome | CDS | 3453286 | 1326 | - | 0.564103 |
hydH | SDY_3723 | sensor kinase for HydG hydrogenase 3 activity | chromosome | CDS | 3454608 | 1377 | - | 0.54321 |
kdpE | SDY_0629 | regulator of kdp operon | chromosome | CDS | 590523 | 678 | - | 0.564897 |
lexA | SDY_4531 | regulator for SOS regulon | chromosome | CDS | 4238458 | 609 | - | 0.522168 |
narL | SDY_1275 | NarL | chromosome | CDS | 1177738 | 651 | - | 0.519201 |
narP | SDY_0885 | nitrate/nitrite response regulator | chromosome | CDS | 832813 | 648 | - | 0.521605 |
narQ | SDY_2653 | sensor for nitrate reductase system | chromosome | CDS | 2444574 | 1701 | + | 0.513815 |
narX | SDY_1276 | nitrate/nitrate sensor | chromosome | CDS | 1178381 | 1797 | - | 0.535337 |
ompR | SDY_3671 | response regulator affecting transcription of ompC and ompF | chromosome | CDS | 3402803 | 720 | + | 0.551389 |
phoB | SDY_0338 | positive response regulator for pho regulon | chromosome | CDS | 326751 | 690 | - | 0.542029 |
phoP | SDY_2022 | transcriptional regulatory protein | chromosome | CDS | 1830819 | 672 | + | 0.471726 |
phoQ | SDY_2023 | sensor protein PhoQ | chromosome | CDS | 1831490 | 1461 | + | 0.511294 |
proQ | SDY_1979 | activator of ProP osmoprotectant transporter | chromosome | CDS | 1799332 | 699 | - | 0.532189 |
pspA | SDY_1940 | phage shock protein | chromosome | CDS | 1763102 | 669 | - | 0.493274 |
pspC | SDY_1938 | phage shock protein | chromosome | CDS | 1762465 | 360 | - | 0.494444 |
pspF | SDY_1941 | psp operon transcriptional activator | chromosome | CDS | 1763922 | 993 | + | 0.513595 |
ptsN | SDY_3385 | phosphotransferase system enzyme IIA | chromosome | CDS | 3137827 | 492 | + | 0.514228 |
ptsP | SDY_3046 | PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins) | chromosome | CDS | 2822818 | 2247 | - | 0.538051 |
ptxA | SDY_4364 | putative PTS system enzyme II A component | chromosome | CDS | 4089288 | 465 | + | 0.541936 |
qseC | SDY_3213 | quorum sensing Escherichia coli regulator C | chromosome | CDS | 2975119 | 1350 | - | 0.523704 |
rcsB | SDY_0857 | positive response regulator for colanic capsule biosynthesis | chromosome | CDS | 805406 | 651 | - | 0.474654 |
rcsC | SDY_0856 | sensor for ctr capsule biosynthesis | chromosome | CDS | 802405 | 2802 | + | 0.509993 |
relA | SDY_3001 | (p)ppGpp synthetase I | chromosome | CDS | 2767392 | 2235 | - | 0.536465 |
rseA | SDY_2813 | sigma-E factor, negative regulatory protein | chromosome | CDS | 2603595 | 651 | - | 0.519201 |
rseB | SDY_2812 | regulates activity of sigma-E factor | chromosome | CDS | 2602639 | 957 | - | 0.506792 |
rseC | SDY_2811 | sigma-E factor, negative regulatory protein | chromosome | CDS | 2602163 | 480 | - | 0.552083 |
rstA | SDY_1824 | response transcriptional regulatory protein | chromosome | CDS | 1658219 | 717 | + | 0.492329 |
rstB | SDY_1825 | sensor histidine protein kinase | chromosome | CDS | 1658939 | 1302 | + | 0.506144 |
rtn | SDY_0903 | conserved hypothetical protein | chromosome | CDS | 852029 | 1557 | - | 0.506744 |
spoT | SDY_4082 | (p)ppGpp synthetase II | chromosome | CDS | 3815922 | 2109 | + | 0.539592 |
spy | SDY_1534 | Spy | chromosome | CDS | 1406110 | 486 | + | 0.506173 |
torR | SDY_0969 | response transcriptional regulator for torA | chromosome | CDS | 918513 | 693 | - | 0.526696 |
trg | SDY_1760 | methyl-accepting chemotaxis protein III | chromosome | CDS | 1600836 | 1434 | - | 0.51325 |
uhpA | SDY_4150 | response regulator, positive activator of uhpT transcription | chromosome | CDS | 3884216 | 591 | - | 0.571912 |
uhpB | SDY_4149 | sensor histidine protein kinase phosphorylates UhpA | chromosome | CDS | 3882714 | 1506 | - | 0.569721 |
umuD | SDY_1220 | UmuD | chromosome | CDS | 1125536 | 420 | + | 0.480952 |
uspA | SDY_3567 | universal stress protein; broad regulatory function? | chromosome | CDS | 3303167 | 435 | - | 0.494253 |
uvrY | SDY_1104 | putative 2-component transcriptional regulator | chromosome | CDS | 1029742 | 657 | + | 0.500761 |
waaP | SDY_4060 | putative LPS biosynthesis enzyme | chromosome | CDS | 3797427 | 807 | - | 0.477076 |
yaeG | SDY_0179 | conserved hypothetical protein | chromosome | CDS | 183466 | 801 | + | 0.534332 |
yaiC | SDY_0358 | conserved hypothetical protein | chromosome | CDS | 345972 | 1116 | - | 0.536738 |
ybdQ | SDY_0542 | conserved hypothetical protein | chromosome | CDS | 527960 | 429 | - | 0.498834 |
ybeJ | SDY_0592 | putative periplasmic binding transport protein | chromosome | CDS | 561524 | 909 | - | 0.489549 |
ybeZ | SDY_0596 | putative ATP-binding protein in pho regulon | chromosome | CDS | 565824 | 1080 | - | 0.542593 |
ybiI | SDY_0796 | conserved hypothetical protein | chromosome | CDS | 744199 | 267 | + | 0.513109 |
yccY | SDY_0958 | putative phosphatase | chromosome | CDS | 906885 | 459 | - | 0.51634 |
ydaA | SDY_1413 | conserved hypothetical protein | chromosome | CDS | 1305488 | 951 | - | 0.500526 |
ydeH | SDY_1590 | conserved hypothetical protein | chromosome | CDS | 1454872 | 891 | + | 0.445567 |
yeaP | SDY_1692 | conserved hypothetical protein | chromosome | CDS | 1548216 | 1155 | + | 0.468398 |
yecG | SDY_1192 | putative regulator | chromosome | CDS | 1104628 | 429 | + | 0.452214 |
yedW | SDY_1039 | putative 2-component transcriptional regulator | chromosome | CDS | 981021 | 699 | + | 0.430615 |
yehT | SDY_2164 | conserved hypothetical protein | chromosome | CDS | 1963682 | 735 | + | 0.497959 |
yehU | SDY_2163 | putative 2-component sensor protein | chromosome | CDS | 1962015 | 1686 | + | 0.510083 |
yeiL | SDY_2099 | putative transcriptional regulator | chromosome | CDS | 1904733 | 660 | - | 0.445455 |
yfhA | SDY_2744 | putative 2-component transcriptional regulator | chromosome | CDS | 2541340 | 1335 | - | 0.545318 |
yfhK | SDY_2746 | putative 2-component sensor protein | chromosome | CDS | 2543542 | 1491 | - | 0.523139 |
yfiN | SDY_2778 | conserved hypothetical protein | chromosome | CDS | 2574436 | 798 | + | 0.487469 |
ygaA | SDY_2906 | putative 2-component transcriptional regulator | chromosome | CDS | 2685497 | 1590 | - | 0.561006 |
ygaG | SDY_2884 | conserved hypothetical protein | chromosome | CDS | 2668266 | 516 | - | 0.517442 |
ygiM | SDY_3238 | conserved hypothetical protein | chromosome | CDS | 3001323 | 621 | + | 0.521739 |
ygiX | SDY_3214 | putative 2-component transcriptional regulator | chromosome | CDS | 2976465 | 660 | - | 0.516667 |
yhdA | SDY_3427 | conserved hypothetical protein | chromosome | CDS | 3185131 | 1941 | - | 0.501803 |
yhdW | SDY_3445 | putative periplasmic binding transport protein | chromosome | CDS | 3201757 | 918 | + | 0.486928 |
yhiE | SDY_3539 | conserved hypothetical protein | chromosome | CDS | 3276325 | 528 | - | 0.327652 |
yhjH | SDY_4545 | conserved hypothetical protein | chromosome | CDS | 4253161 | 771 | - | 0.522698 |
yhjK | SDY_4549 | conserved hypothetical protein | chromosome | CDS | 4258371 | 1956 | - | 0.521472 |
yihK | SDY_3872 | putative GTP-binding factor | chromosome | CDS | 3599019 | 1824 | - | 0.533991 |
yiiO | SDY_3833 | Uncharacterized periplasmic protein | chromosome | CDS | 3565926 | 504 | - | 0.501984 |
yiiT | SDY_3821 | putative regulator | chromosome | CDS | 3556976 | 429 | - | 0.433566 |
yjaI | SDY_3724 | conserved hypothetical protein | chromosome | CDS | 3456081 | 561 | + | 0.511586 |
yjdG | SDY_4237 | putative 2-component transcriptional regulator | chromosome | CDS | 3969054 | 720 | - | 0.495833 |
yjdH | SDY_4238 | putative 2-component sensor protein | chromosome | CDS | 3969770 | 1632 | - | 0.501225 |
yjiY | SDY_4607 | putative carbon starvation protein | chromosome | CDS | 4315423 | 2166 | - | 0.560018 |
ylaB | SDY_0393 | conserved hypothetical protein | chromosome | CDS | 377347 | 1314 | - | 0.47032 |
ynaF | SDY_1458 | putative filament protein | chromosome | CDS | 1338033 | 507 | - | 0.469428 |
yojN | SDY_0858 | putative 2-component sensor protein | chromosome | CDS | 806073 | 2673 | - | 0.493453 |