Gene list
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COG category: Signal transduction mechanisms
Organism: Bordetella avium 197N, 197N
Number of genes found: 107
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| Bordetella avium 197N, 197N | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | BAV1662 | two-component sensor kinase | SubName: Full=Two-component sensor kinase; | chromosome | CDS | 1743638 | 1755 | - | 0.622222 |
| NA | BAV0524 | two-component system sensor kinase | SubName: Full=Two-component system sensor kinase; | chromosome | CDS | 543432 | 1311 | + | 0.635393 |
| NA | BAV2907 | two-component sensor kinase | SubName: Full=Two-component sensor kinase; | chromosome | CDS | 3164873 | 1497 | - | 0.619906 |
| NA | BAV1074 | BolA-like protein | SubName: Full=BolA-like protein; | chromosome | CDS | 1151270 | 270 | - | 0.525926 |
| NA | BAV2681 | putative signaling protein | SubName: Full=Putative signaling protein; | chromosome | CDS | 2899832 | 618 | + | 0.564725 |
| NA | BAV0783 | two component system response regulator | SubName: Full=Two component system response regulator; | chromosome | CDS | 820533 | 558 | + | 0.630824 |
| NA | BAV0789 | chemotaxis sensory transducer | SubName: Full=Chemotaxis sensory transducer; | chromosome | CDS | 826632 | 1383 | + | 0.605929 |
| NA | BAV1869 | putative signaling protein | SubName: Full=Putative signaling protein; Flags: Precursor; Fragment; | chromosome | CDS | 1962173 | 1560 | - | 0.611538 |
| NA | BAV1934 | putative signaling protein | SubName: Full=Putative signaling protein; | chromosome | CDS | 2031369 | 1806 | + | 0.638427 |
| NA | BAV0747 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 782359 | 1185 | - | 0.676793 |
| NA | BAV1661 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 1743015 | 627 | - | 0.602871 |
| NA | BAV2117 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 2264953 | 672 | - | 0.599702 |
| NA | BAV0199 | putative two-component system response regulator | SubName: Full=Putative two-component system response regulator; | chromosome | CDS | 206160 | 624 | - | 0.612179 |
| NA | BAV1276 | Crp-family transcriptional regulator | SubName: Full=Crp-family transcriptional regulator; Flags: Fragment; | chromosome | CDS | 1369273 | 660 | - | 0.490909 |
| NA | BAV0015 | putative membrane protein | SubName: Full=Putative membrane protein; Flags: Precursor; | chromosome | CDS | 20028 | 1095 | + | 0.60274 |
| NA | BAV1754 | putative signaling protein | SubName: Full=Putative signaling protein; Flags: Precursor; | chromosome | CDS | 1842554 | 1146 | + | 0.620419 |
| NA | BAV0353 | methyl-accepting-chemotaxis-protein | SubName: Full=Methyl-accepting-chemotaxis-protein; | chromosome | CDS | 367409 | 1284 | - | 0.57866 |
| NA | BAV0018 | probable two-component response regulator | SubName: Full=Probable two-component response regulator; | chromosome | CDS | 24586 | 720 | - | 0.559722 |
| NA | BAV2535 | putative signaling protein | SubName: Full=Putative signaling protein; Flags: Fragment; | chromosome | CDS | 2739110 | 801 | - | 0.593009 |
| NA | BAV2167 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2328569 | 1647 | + | 0.620522 |
| NA | BAV2920 | putative universal stress protein | RecName: Full=Universal stress protein; Flags: Precursor; | chromosome | CDS | 3178244 | 462 | - | 0.577922 |
| NA | BAV0782 | two component system sensor kinase | SubName: Full=Two component system sensor kinase; | chromosome | CDS | 819241 | 1200 | + | 0.65 |
| NA | BAV2324 | putative metal-dependent phosphohydrolase | SubName: Full=Putative metal-dependent phosphohydrolase; | chromosome | CDS | 2503755 | 768 | - | 0.60026 |
| NA | BAV2310 | two-component system response regulator | SubName: Full=Two-component system response regulator; | chromosome | CDS | 2491999 | 696 | + | 0.610632 |
| NA | BAV2255 | putative 3-deoxy-D-manno-octulosonic acid kinase | SubName: Full=Putative 3-deoxy-D-manno-octulosonic acid kinase; Flags: Fragment; | chromosome | CDS | 2431882 | 699 | - | 0.683834 |
| NA | BAV2275 | two-component sensor kinase | SubName: Full=Two-component sensor kinase; Flags: Precursor; | chromosome | CDS | 2453789 | 2733 | + | 0.642151 |
| NA | BAV2276 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 2456534 | 726 | - | 0.61708 |
| NA | BAV1949 | putative two-component sensor histidine kinase | SubName: Full=Putative two-component sensor histidine kinase; Flags: Precursor; | chromosome | CDS | 2081941 | 1842 | - | 0.614549 |
| NA | BAV2943 | putative two-component response regulator | SubName: Full=Putative two-component response regulator; | chromosome | CDS | 3200976 | 807 | - | 0.599752 |
| NA | BAV0109 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 113981 | 489 | + | 0.619632 |
| NA | BAV2132 | putative signaling membrane protein | SubName: Full=Putative signaling membrane protein; | chromosome | CDS | 2283601 | 1038 | + | 0.583815 |
| NA | BAV2116 | two-component sensor kinase | SubName: Full=Two-component sensor kinase; | chromosome | CDS | 2263701 | 1146 | - | 0.596859 |
| NA | BAV0231 | two-component system response regulator | SubName: Full=Two-component system response regulator; | chromosome | CDS | 239018 | 684 | + | 0.619883 |
| NA | BAV1363 | histone deacetylase family protein | SubName: Full=Histone deacetylase family protein; | chromosome | CDS | 1434565 | 915 | + | 0.598907 |
| NA | BAV0019 | Two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 25555 | 714 | + | 0.620448 |
| NA | BAV2311 | two-component system sensor kinase | SubName: Full=Two-component system sensor kinase; Flags: Precursor; | chromosome | CDS | 2492798 | 1386 | + | 0.627706 |
| NA | BAV3061 | putative chemotaxis protein | RecName: Full=Probable chemoreceptor glutamine deamidase CheD; EC=3.5.1.44; | chromosome | CDS | 3329812 | 681 | + | 0.612335 |
| NA | BAV0383 | serine/threonine protein phosphatase | SubName: Full=Serine/threonine protein phosphatase; EC=3.1.3.16; | chromosome | CDS | 391398 | 681 | + | 0.559471 |
| NA | BAV2463 | putative transcriptional regulator (partial CDS) | SubName: Full=Putative transcriptional regulator; Flags: Fragment; | chromosome | CDS | 2659969 | 384 | - | 0.580729 |
| NA | BAV0188 | cyclic nucleotide-binding regulatory protein | SubName: Full=Cyclic nucleotide-binding regulatory protein; | chromosome | CDS | 193934 | 699 | + | 0.623748 |
| NA | BAV1874 | putative response regulator | SubName: Full=Putative response regulator; | chromosome | CDS | 1967811 | 1200 | + | 0.5925 |
| NA | BAV1542 | putative signaling protein | SubName: Full=Putative signaling protein; | chromosome | CDS | 1599453 | 1266 | - | 0.579779 |
| NA | BAV1188 | putative signaling protein | SubName: Full=Putative signaling protein; Flags: Precursor; | chromosome | CDS | 1268652 | 1542 | - | 0.419585 |
| NA | BAV2955 | putative serine protein kinase | SubName: Full=Putative serine protein kinase; Flags: Fragment; | chromosome | CDS | 3211348 | 1926 | - | 0.547248 |
| NA | BAV2133 | putative signaling protein | SubName: Full=Putative signaling protein; | chromosome | CDS | 2284689 | 1353 | + | 0.589061 |
| NA | BAV0100 | putative bifunctional protein: two-component system sensor protein and solute-binding protein | SubName: Full=Putative bifunctional protein: two-component system sensor protein and solute-binding protein; Flags: Precursor; Fragment; | chromosome | CDS | 101195 | 2439 | + | 0.645346 |
| NA | BAV3311 | BolA-like protein | SubName: Full=BolA-like protein; | chromosome | CDS | 3601421 | 246 | + | 0.617886 |
| NA | BAV2274 | putative signaling protein | SubName: Full=Putative signaling protein; Flags: Fragment; | chromosome | CDS | 2452209 | 1365 | - | 0.59707 |
| NA | BAV0099 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 100501 | 672 | + | 0.614583 |
| NA | BAV2442 | putative signaling protein | SubName: Full=Putative signaling protein; Flags: Precursor; | chromosome | CDS | 2630384 | 2079 | + | 0.615681 |
| NA | BAV1392 | putative two-component response regulator | SubName: Full=Putative two-component response regulator; | chromosome | CDS | 1461940 | 744 | - | 0.590054 |
| NA | BAV3025 | Putative signaling protein | SubName: Full=Putative signaling protein; | chromosome | CDS | 3289882 | 798 | - | 0.625313 |
| NA | BAV3184 | putative universal stress protein | SubName: Full=Putative universal stress protein; | chromosome | CDS | 3459622 | 855 | + | 0.651462 |
| NA | BAV0523 | two-component system response regulator | SubName: Full=Two-component system response regulator; | chromosome | CDS | 542749 | 687 | + | 0.637555 |
| NA | BAV1239 | putative signaling protein | SubName: Full=Putative signaling protein; Flags: Precursor; | chromosome | CDS | 1335782 | 1566 | + | 0.607918 |
| NA | BAV1950 | putative two-component response regulator | SubName: Full=Putative two-component response regulator; Flags: Precursor; | chromosome | CDS | 2083779 | 678 | - | 0.623894 |
| NA | BAV1789 | putative signaling protein | SubName: Full=Putative signaling protein; Flags: Precursor; | chromosome | CDS | 1878085 | 2076 | - | 0.601638 |
| NA | BAV0836 | PhoH-like protein | SubName: Full=PhoH-like protein; | chromosome | CDS | 880073 | 1023 | + | 0.630499 |
| NA | BAV0352 | putative signaling protein | SubName: Full=Putative signaling protein; | chromosome | CDS | 366238 | 819 | - | 0.566545 |
| NA | BAV0016 | probable two-component sensor protein | SubName: Full=Probable two-component sensor protein; Flags: Precursor; | chromosome | CDS | 21129 | 2304 | - | 0.609809 |
| NA | BAV0255 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 262695 | 774 | + | 0.627907 |
| NA | BAV2908 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 3166386 | 654 | - | 0.602446 |
| NA | BAV3028 | Putative sensor kinase | SubName: Full=Putative sensor kinase; Flags: Precursor; | chromosome | CDS | 3291651 | 1989 | - | 0.617396 |
| NA | BAV2525 | probable sigma-54 interacting transcription regulator (partial) | SubName: Full=Probable sigma-54 interacting transcription regulator (Partial); Flags: Fragment; | chromosome | CDS | 2732487 | 312 | - | 0.570513 |
| NA | BAV0230 | two-component system sensor kinase | SubName: Full=Two-component system sensor kinase; Flags: Precursor; | chromosome | CDS | 236709 | 2298 | + | 0.621845 |
| NA | BAV1003 | putative signaling protein | SubName: Full=Putative signaling protein; | chromosome | CDS | 1074163 | 1290 | - | 0.589147 |
| apaH | BAV3007 | diadenosine-tetraphosphatase | RecName: Full=Bis(5-nucleosyl)-tetraphosphatase, symmetrical; EC=3.6.1.41; AltName: Full=Ap4A hydrolase; AltName: Full=Diadenosine 5,5-P1,P4-tetraphosphate pyrophosphohydrolase; AltName: Full=Diadenosine tetraphosphatase; | chromosome | CDS | 3272543 | 837 | + | 0.642772 |
| aphA1 | BAV2201 | acetylpolyamine aminohydrolase | SubName: Full=Acetylpolyamine aminohydrolase; | chromosome | CDS | 2365103 | 1065 | + | 0.633803 |
| aphA2 | BAV2226 | acetylpolyamine aminohydrolase | SubName: Full=Acetylpolyamine aminohydrolase; | chromosome | CDS | 2391658 | 1020 | + | 0.603922 |
| btr | BAV2425 | fumarate and nitrate reduction regulatory protein | SubName: Full=Fumarate and nitrate reduction regulatory protein; | chromosome | CDS | 2618093 | 729 | + | 0.591221 |
| bvgA | BAV1875 | virulence factors transcription regulator | SubName: Full=Virulence factors transcription regulator; | chromosome | CDS | 1969437 | 624 | + | 0.536859 |
| bvgS | BAV1876 | virulence sensor protein | SubName: Full=Virulence sensor protein; Flags: Precursor; Fragment; | chromosome | CDS | 1970064 | 3660 | + | 0.598634 |
| cheB | BAV1679 | chemotaxis response regulator protein-glutamate methylesterase | RecName: Full=Chemotaxis response regulator protein-glutamate methylesterase 2; EC=3.1.1.61; | chromosome | CDS | 1764918 | 1056 | + | 0.629735 |
| cheB | BAV1025 | chemotaxis response regulator protein-glutamate methylesterase | RecName: Full=Chemotaxis response regulator protein-glutamate methylesterase 1; EC=3.1.1.61; | chromosome | CDS | 1098194 | 1029 | + | 0.646259 |
| cheR | BAV1678 | chemotaxis protein methyltransferase | SubName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; Flags: Fragment; | chromosome | CDS | 1764056 | 846 | + | 0.591017 |
| cheR | BAV1022 | chemotaxis protein methyltransferase | SubName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; | chromosome | CDS | 1094141 | 1221 | + | 0.648649 |
| cheY | BAV1680 | chemotaxis response regulator | SubName: Full=Chemotaxis response regulator; | chromosome | CDS | 1766018 | 390 | + | 0.538462 |
| cheY | BAV1674 | chemotaxis two-component response regulator | SubName: Full=Chemotaxis two-component response regulator; | chromosome | CDS | 1759357 | 381 | + | 0.619423 |
| dctB | BAV2219 | two component sensor kinase for C4-dicarboxylate transport | SubName: Full=Two component sensor kinase for C4-dicarboxylate transport; Flags: Precursor; Fragment; | chromosome | CDS | 2382543 | 1929 | + | 0.635044 |
| dctD | BAV2220 | two component response regulator for C4-dicarboxylate transport | SubName: Full=Two component response regulator for C4-dicarboxylate transport; | chromosome | CDS | 2384471 | 1392 | + | 0.62069 |
| dksA | BAV0144 | putative dnaK suppressor protein | RecName: Full=RNA polymerase-binding transcription factor DksA; | chromosome | CDS | 148333 | 465 | - | 0.591398 |
| envZ | BAV2784 | osmolarity two component sensor kinase | SubName: Full=Osmolarity two component sensor kinase; EC=2.7.3.-; Flags: Precursor; | chromosome | CDS | 3012011 | 1479 | + | 0.665314 |
| exra | BAV1503 | LexA repressor | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 1556854 | 642 | - | 0.640187 |
| glnE | BAV2382 | glutamate-ammonia-ligase adenylyltransferase | RecName: Full=Glutamate-ammonia-ligase adenylyltransferase; EC=2.7.7.42; AltName: Full=Glutamine-synthase adenylyltransferase; AltName: Full=[Glutamate--ammonia-ligase] adenylyltransferase; | chromosome | CDS | 2568149 | 2772 | + | 0.643579 |
| glnG | BAV1929 | nitrogen regulation protein NR(I) | SubName: Full=Nitrogen regulation protein NR(I); | chromosome | CDS | 2025161 | 1476 | - | 0.651762 |
| glnL | BAV1930 | nitrogen regulation protein NR(II) | SubName: Full=Nitrogen regulation protein NR(II); EC=2.7.3.-; | chromosome | CDS | 2026636 | 1062 | - | 0.614878 |
| hprK | BAV3157 | Hpr kinase/phosphorylase | RecName: Full=HPr kinase/phosphorylase; Short=HPrK/P; EC=2.7.11.-; EC=2.7.4.-; AltName: Full=HPr(Ser) kinase/phosphorylase; | chromosome | CDS | 3433268 | 927 | + | 0.618123 |
| irlR | BAV2048 | heavy metal sensing two-component sytem,response regulator | SubName: Full=Heavy metal sensing two-component sytem,response regulator; Flags: Precursor; Fragment; | chromosome | CDS | 2192787 | 672 | - | 0.572917 |
| irlS | BAV2047 | heavy metal sensing two-component sytem, sensor kinase | SubName: Full=Heavy metal sensing two-component sytem, sensor kinase; EC=2.7.3.-; Flags: Precursor; | chromosome | CDS | 2191372 | 1419 | - | 0.622269 |
| kdpD | BAV2704 | two component sensor kinase | SubName: Full=Two component sensor kinase; EC=2.7.3.-; Flags: Fragment; | chromosome | CDS | 2927924 | 2769 | + | 0.651499 |
| kdpE | BAV2705 | two component response regulator | SubName: Full=Two component response regulator; | chromosome | CDS | 2930698 | 693 | + | 0.650794 |
| ompB | BAV2783 | osmolarity two component response regulator | SubName: Full=Osmolarity two component response regulator; | chromosome | CDS | 3011305 | 702 | + | 0.652422 |
| phoB | BAV3090 | phosphate regulon two-component response regulator | SubName: Full=Phosphate regulon two-component response regulator; | chromosome | CDS | 3362574 | 699 | + | 0.625179 |
| phoR | BAV3091 | phosphate regulon two-component system sensor kinase | SubName: Full=Phosphate regulon two-component system sensor kinase; EC=2.7.3.-; Flags: Precursor; | chromosome | CDS | 3363285 | 1323 | + | 0.649282 |
| pphA | BAV2039 | serine/threonine protein phosphatase | SubName: Full=Serine/threonine protein phosphatase; EC=3.1.3.16; | chromosome | CDS | 2185149 | 717 | - | 0.620642 |
| ptpA | BAV1506 | low molecular weight protein-tyrosine-phosphatase | SubName: Full=Low molecular weight protein-tyrosine-phosphatase; EC=3.1.3.48; | chromosome | CDS | 1561354 | 492 | + | 0.589431 |
| ptsN | BAV3156 | nitrogen regulatory IIA protein | SubName: Full=Nitrogen regulatory IIA protein; EC=2.7.1.69; | chromosome | CDS | 3432790 | 465 | + | 0.621505 |
| rcsB | BAV1770 | putative two-component response regulator of capsular synthesis | SubName: Full=Putative two-component response regulator of capsular synthesis; | chromosome | CDS | 1857012 | 696 | + | 0.560345 |
| rcsC | BAV1780 | putative two component sensor kinase for capsular biosynthesis | SubName: Full=Putative two component sensor kinase for capsular biosynthesis; EC=2.7.3.-; Flags: Precursor; | chromosome | CDS | 1867719 | 3429 | - | 0.622339 |
| relA | BAV1100 | putative GTP pyrophosphokinase | SubName: Full=Putative GTP pyrophosphokinase; EC=2.7.6.5; | chromosome | CDS | 1174984 | 2232 | + | 0.623208 |
| risA | BAV1066 | two component system response regulator | SubName: Full=Two component system response regulator; | chromosome | CDS | 1139101 | 735 | - | 0.594558 |
| risS | BAV1065 | two component system sensor kinase | SubName: Full=Two component system sensor kinase; | chromosome | CDS | 1137672 | 1443 | - | 0.622315 |
| rseB | BAV1127 | sigma-E factor regulatory protein | SubName: Full=Sigma-E factor regulatory protein; Flags: Precursor; | chromosome | CDS | 1201828 | 1026 | + | 0.599415 |
| rtcR | BAV3409 | transcriptional regulator (sigma54-dependent regulator) | SubName: Full=Transcriptional regulator (Sigma54-dependent regulator); | chromosome | CDS | 3704368 | 1605 | + | 0.601246 |
| rtn | BAV3364 | putative signaling protein | SubName: Full=Putative signaling protein; Flags: Precursor; | chromosome | CDS | 3650673 | 1563 | + | 0.628279 |
| spoT | BAV1957 | guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolase | SubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; EC=3.1.7.2; | chromosome | CDS | 2090198 | 2271 | + | 0.623514 |
| wspR | BAV1026 | putative signaling/response regulator protein | SubName: Full=Putative signaling/response regulator protein; | chromosome | CDS | 1099234 | 1011 | + | 0.614243 |
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