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2024-04-27 11:19:21

Gene list

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COG category: Signal transduction mechanisms
Organism: Escherichia coli CFT073, CFT073

Number of genes found: 192

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA c5041 Putative transport sensor proteinchromosome CDS4819876 1821 - 0.405272
NA c5040 Putative c4-dicarboxylate transport transcriptional Regulatory proteinchromosome CDS4818525 1359 - 0.445916
aceK c4974 Isocitrate dehydrogenase kinase/phosphatasechromosome CDS4749816 1725 + 0.528696
aer Aerotaxis receptorchromosome CDS3658151 1521 - 0.550953
apaH Bis(5'-nucleosyl)-tetraphosphatase, symmetricalchromosome CDS53566 849 - 0.55477
arcA Aerobic respiration control protein arcAchromosome CDS5229366 717 - 0.506276
arcB Aerobic respiration control sensor protein arcBchromosome CDS3784181 2337 - 0.505777
artI Arginine-binding periplasmic protein 1 precursorchromosome CDS956386 732 - 0.487705
artJ Arginine-binding periplasmic protein 2 precursorchromosome CDS954038 783 - 0.455939
atoC Acetoacetate metabolism Regulatory protein atoCchromosome CDS2608719 1386 + 0.492063
atoS Sensor protein atoSchromosome CDS2606884 1839 + 0.488853
baeR Transcriptional Regulatory protein baeRchromosome CDS2450862 723 + 0.538036
baeS Sensor protein baeSchromosome CDS2449462 1404 + 0.532051
barA Sensor protein barAchromosome CDS3189875 2757 + 0.496917
basR c5118 Transcriptional Regulatory protein basR/pmrAchromosome CDS4891818 669 - 0.539611
basS c5117 Sensor protein basS/pmrBchromosome CDS4890717 1101 - 0.536785
bglJ Transcriptional activator protein bglJchromosome CDS5193149 678 + 0.446903
bolA BolA proteinchromosome CDS528366 351 + 0.481481
c0336 PTS system, mannitol (Cryptic)-specific IIA componentchromosome CDS307515 444 - 0.475225
c0365 Hypothetical proteinchromosome CDS346408 531 + 0.297552
c0428 Conserved hypothetical proteinchromosome CDS413296 705 - 0.483688
c0435 Hypothetical protein yahAchromosome CDS422858 1095 + 0.454795
c0888 Hypothetical protein ybiIchromosome CDS860511 267 - 0.509363
c0940 Hypothetical protein ybiIchromosome CDS914038 216 + 0.560185
c0959 Putative Regulatory proteinchromosome CDS928093 429 + 0.596737
c1246 Hypothetical proteinchromosome CDS1195131 741 + 0.470985
c1527 Hypothetical proteinchromosome CDS1402232 276 - 0.449275
c1546 Repressor proteinchromosome CDS1412427 423 - 0.472813
c1610 Conserved hypothetical proteinchromosome CDS1457126 852 + 0.442488
c1846 Putative conserved proteinchromosome CDS1686126 471 + 0.537155
c1918 Putative sensor kinasechromosome CDS1751294 1341 - 0.510067
c1919 Putative conserved proteinchromosome CDS1752635 219 - 0.447489
c2241 Protein yebRchromosome CDS2067303 447 - 0.501119
c2587 Hypothetical proteinchromosome CDS2423192 231 - 0.519481
c2885 Phosphohistidine phosphatase sixAchromosome CDS2738288 486 - 0.518519
c2896 Hypothetical proteinchromosome CDS2755791 621 - 0.375201
c2922 Putative phosphoenolpyruvate-protein phosphotransferase ypdDchromosome CDS2784376 2496 - 0.544071
c3190 Hypothetical proteinchromosome CDS3056243 360 - 0.555556
c3197 Putative repressor protein of prophagechromosome CDS3059233 627 + 0.433812
c3271 Hypothetical proteinchromosome CDS3121057 429 + 0.424242
c3397 Hypothetical proteinchromosome CDS3237749 1434 + 0.515342
c3564 Hypothetical proteinchromosome CDS3413218 1473 - 0.468432
c3565 Putative response regulatorchromosome CDS3414691 723 - 0.466113
c4277 Putative phosphotransferase system enzyme subunitchromosome CDS4058602 486 + 0.477366
c4487 Putative phosphotransferase system (PTS), fructose-specificchromosome CDS4267970 471 - 0.43949
c4545 Hypothetical proteinchromosome CDS4322181 1263 + 0.428345
c4546 Hypothetical proteinchromosome CDS4323460 1056 + 0.425189
c4577 Conserved hypothetical proteinchromosome CDS4340433 423 + 0.515366
cheA Chemotaxis protein cheAchromosome CDS2122813 2019 - 0.529965
cheB Protein-glutamate methylesterasechromosome CDS2118280 1050 - 0.542857
cheR Chemotaxis protein methyltransferasechromosome CDS2119332 861 - 0.542393
cheW Chemotaxis protein cheWchromosome CDS2122289 504 - 0.521825
cheY Chemotaxis protein cheYchromosome CDS2117876 390 - 0.494872
cheZ Chemotaxis protein cheZchromosome CDS2117221 675 - 0.533333
citA Sensor kinase dpiBchromosome CDS692768 1719 + 0.493892
citB Transcriptional Regulatory protein dpiAchromosome CDS694455 681 + 0.509545
cmtB PTS system, mannitol (Cryptic)-specific IIA componentchromosome CDS3372772 444 - 0.421171
cpxA c4863 Sensor protein cpxAchromosome CDS4623260 1374 - 0.547307
cpxP c4865 Conserved hypothetical proteinchromosome CDS4625475 504 + 0.501984
cpxR c4864 Transcriptional Regulatory protein cpxRchromosome CDS4624630 699 - 0.516452
creB Transcriptional Regulatory protein creBchromosome CDS5225783 690 + 0.546377
creC Sensor protein creCchromosome CDS5226472 1425 + 0.538246
crp Catabolite gene activatorchromosome CDS3917508 633 + 0.49763
csrA Carbon storage regulatorchromosome CDS3101427 186 - 0.494624
cstA Carbon starvation protein Achromosome CDS671967 2106 + 0.574074
cusR Transcriptional Regulatory protein cusRchromosome CDS638381 684 - 0.545322
cusS Sensor kinase cusSchromosome CDS636949 1443 - 0.518364
dksA DnaK suppressor proteinchromosome CDS170698 474 - 0.525316
envZ Osmolarity sensor protein envZchromosome CDS3961381 1353 - 0.563193
evgA Positive transcription regulator evgAchromosome CDS2766143 615 + 0.396748
evgS Sensor protein evgS precursorchromosome CDS2766762 3594 + 0.407624
fhlA Formate hydrogenlyase transcriptional activatorchromosome CDS3134994 2115 + 0.518203
fliY Cystine-binding periplasmic protein precursorchromosome CDS2148973 858 - 0.493007
fnr Fumarate and nitrate reduction Regulatory proteinchromosome CDS1640861 810 - 0.495062
gatA PTS system, galactitol-specific IIA componentchromosome CDS2464639 453 - 0.426049
glnE Glutamate-ammonia-ligase adenylyltransferasechromosome CDS3635654 2952 - 0.553862
glnG c4817 Nitrogen regulation protein NR(I)chromosome CDS4579364 1470 - 0.561224
glnH Glutamine-binding periplasmic protein precursorchromosome CDS869609 747 - 0.484605
glnL c4818 Nitrogen regulation protein NR(II)chromosome CDS4580785 1050 - 0.551429
hisJ Histidine-binding periplasmic protein precursorchromosome CDS2707533 783 - 0.489144
hnr Hnr proteinchromosome CDS1535213 1014 + 0.483235
hydG c4962 Transcriptional Regulatory protein zraRchromosome CDS4734500 1326 + 0.568627
hydH c4961 Sensor protein zraSchromosome CDS4733127 1377 + 0.545389
kdpD Sensor protein kdpDchromosome CDS762465 2688 - 0.574033
kdpE KDP operon transcriptional Regulatory protein kdpEchromosome CDS761791 678 - 0.569322
lexA c5014 LexA repressorchromosome CDS4789145 609 + 0.518883
narL Nitrate/nitrite response regulator protein narLchromosome CDS1513979 717 - 0.514644
narP Nitrate/nitrite response regulator protein narPchromosome CDS2578154 678 + 0.514749
narQ Nitrate/nitrite sensor protein narQchromosome CDS2856482 1716 + 0.52331
narX Nitrate/nitrite sensor protein narXchromosome CDS1514622 1797 - 0.531441
nrfB c5067 Cytochrome c-type protein nrfB precursorchromosome CDS4842523 573 + 0.541012
ompR Transcriptional Regulatory protein ompRchromosome CDS3962730 720 - 0.55
pgtA c5204 Transport activatorchromosome CDS4958952 1257 + 0.488465
pgtB c5203 Regulatory proteinchromosome CDS4956962 2010 + 0.486567
phoB Phosphate regulon transcriptional Regulatory protein phoBchromosome CDS491208 690 + 0.543478
phoH PhoH proteinchromosome CDS1118312 924 + 0.525974
phoP Transcriptional Regulatory protein phoPchromosome CDS1390669 672 - 0.47619
phoQ Sensor protein phoQchromosome CDS1389209 1461 - 0.506502
phoR Phosphate regulon sensor protein phoRchromosome CDS491955 1296 + 0.532407
pphA Serine/threonine protein phosphatase 1chromosome CDS2073990 660 - 0.478788
pphB Serine/threonine protein phosphatase 2chromosome CDS3140917 657 + 0.42618
proQ ProQ proteinchromosome CDS2066508 699 - 0.532189
prpR Propionate catabolism operon Regulatory proteinchromosome CDS436509 1587 - 0.551985
pspA Phage shock protein Achromosome CDS1610758 669 + 0.493274
pspC Phage shock protein Cchromosome CDS1611704 360 + 0.494444
pspF Psp operon transcriptional activatorchromosome CDS1609615 993 - 0.517623
ptsN Nitrogen regulatory IIA proteinchromosome CDS3780047 516 + 0.517442
ptsP Phosphoenolpyruvate-protein phosphotransferase ptsPchromosome CDS3273509 2247 - 0.537606
ptxA c5284 Unknown pentitol phosphotransferase enzyme II, A componentchromosome CDS5029776 465 + 0.526882
rcsA Colanic acid capsular biosynthesis activation protein Achromosome CDS2175737 624 + 0.384615
rcsB Capsular synthesis regulator component Bchromosome CDS2603099 696 + 0.469828
rcsC Sensor protein rcsCchromosome CDS2603880 2850 - 0.501754
relA GTP pyrophosphokinasechromosome CDS3186235 2235 - 0.536913
rfaP Lipopolysaccharide core biosynthesis protein rfaPchromosome CDS4236156 807 - 0.478315
rseA Sigma-E factor negative Regulatory proteinchromosome CDS2971621 651 - 0.514593
rseB Sigma-E factor Regulatory protein rseB precursorchromosome CDS2970665 957 - 0.513062
rseC Sigma-E factor Regulatory protein rseCchromosome CDS2970189 480 - 0.552083
rstA Transcriptional Regulatory protein rstAchromosome CDS1842794 780 + 0.483333
rstB Sensor protein rstBchromosome CDS1843577 1302 + 0.513057
rtcR Transcriptional Regulatory protein rtcRchromosome CDS3984892 1599 + 0.551595
rtn Rtn proteinchromosome CDS2561261 1557 + 0.49711
spoT Guanosine-3',5'-bis(Diphosphate)3'-pyrophosphohy drolasechromosome CDS4253402 2109 + 0.538644
spy Spheroplast protein Y precursorchromosome CDS1978985 486 - 0.510288
tar Methyl-accepting chemotaxis protein IIchromosome CDS2120483 1683 - 0.521093
torR TorCAD operon transcriptional Regulatory protein torRchromosome CDS1092002 693 - 0.535354
torS Sensor protein torSchromosome CDS1088186 1731 - 0.54535
tsr Methyl-accepting chemotaxis protein Ichromosome CDS5176932 1665 + 0.544144
uhpA Transcriptional Regulatory protein uhpAchromosome CDS4354931 591 - 0.58714
uhpB Sensor protein uhpBchromosome CDS4353429 1509 - 0.571239
umuD UmuD proteinchromosome CDS1468083 420 + 0.480952
uspA Universal stress protein Achromosome CDS4074069 435 + 0.496552
uvrY UvrY proteinchromosome CDS2143379 657 - 0.496195
yaeG Carbohydrate diacid regulatorchromosome CDS193495 1176 + 0.527211
yaiC Hypothetical protein yaiCchromosome CDS477748 1116 + 0.53853
ybdQ Unknown protein from 2D-pagechromosome CDS683364 462 - 0.47619
ybeJ Glutamate/aspartate Periplasmic binding protein precursorchromosome CDS718898 978 - 0.48364
ybeZ PhoH-like proteinchromosome CDS725210 1080 - 0.543519
ycdT Hypothetical protein ycdTchromosome CDS1125933 1491 + 0.37827
ycgF Hypothetical protein ycgFchromosome CDS1454054 1290 - 0.429457
yciR Hypothetical protein yciRchromosome CDS1589049 1986 - 0.483384
ydaA Protein ydaAchromosome CDS1639759 951 - 0.505783
ydaM Hypothetical protein ydaMchromosome CDS1645215 1293 - 0.470998
ydeH Hypothetical protein ydeHchromosome CDS1805113 897 - 0.447046
ydiV Hypothetical protein ydiVchromosome CDS1947275 714 - 0.414566
yeaG Hypothetical protein yeaGchromosome CDS2024141 1935 + 0.497158
yeaI Hypothetical protein yeaIchromosome CDS2027618 1476 + 0.388889
yeaJ Hypothetical protein yeaJchromosome CDS2029094 1671 + 0.456613
yeaP Hypothetical protein yeaPchromosome CDS2034819 1155 + 0.464069
yecG Hypothetical protein yecGchromosome CDS2128429 429 + 0.449883
yedQ Hypothetical protein yedQchromosome CDS2178092 1710 - 0.518713
yedV Putative sensor-like histidine kinase yedVchromosome CDS2188432 1359 - 0.395879
yedW Probable transcriptional Regulatory protein yedWchromosome CDS2189790 783 - 0.429119
yegE Hypothetical protein yegEchromosome CDS2430593 3318 + 0.522604
yehT Hypothetical protein yehTchromosome CDS2503950 735 - 0.502041
yehU Hypothetical protein yehU precursorchromosome CDS2504666 1701 - 0.510288
yeiL Regulatory protein nsrchromosome CDS2545821 699 + 0.437768
yfeA Hypothetical protein yfeAchromosome CDS2796680 2250 - 0.477333
yfgF Hypothetical protein yfgFchromosome CDS2883659 2244 - 0.466132
yfhA Hypothetical protein yfHachromosome CDS2950318 1374 - 0.550218
yfhK Putative sensor-like histidine kinase yfhKchromosome CDS2952520 1491 - 0.527834
yfiN Hypothetical protein yfiNchromosome CDS3005080 1227 + 0.480848
ygaA Hypothetical sigma-54-dependent transcriptional regulator ygaAchromosome CDS3113245 1590 - 0.554717
ygaG Autoinducer-2 production protein luxSchromosome CDS3096814 516 - 0.51938
ygeV Hypothetical sigma-54-dependent transcriptional regulator ygeVchromosome CDS3300449 1779 - 0.459247
ygiM Hypothetical protein ygiM precursorchromosome CDS3641901 621 + 0.520129
ygiX Transcriptional Regulatory protein qseBchromosome CDS3598236 660 + 0.522727
ygiY Sensor protein qseCchromosome CDS3598892 1350 + 0.525185
yhdA Hypothetical protein yhdAchromosome CDS3824591 1941 - 0.502834
yhdW Putative amino-acid ABC transporter binding protein yhdW precursorchromosome CDS3850810 1026 + 0.499025
yhiE Hypothetical protein yhiEchromosome CDS4097033 606 + 0.343234
yhjB Hypothetical transcriptional regulator yhjBchromosome CDS4110037 603 - 0.474295
yhjH Hypothetical protein yhjHchromosome CDS4117144 771 - 0.522698
yhjK Protein yhjKchromosome CDS4122353 1989 - 0.52187
yihK c4820 GTP-binding protein typA/BipAchromosome CDS4583790 1824 + 0.535088
yiiT c4875 Hypothetical protein yiiTchromosome CDS4632951 429 + 0.435897
yjaI c4959 Zinc resistance-associated protein precursorchromosome CDS4732470 561 - 0.509804
yjcC c5052 Hypothetical protein yjcCchromosome CDS4828021 1563 + 0.441459
yjdG c5130 Transcriptional Regulatory protein dcuRchromosome CDS4906210 720 - 0.493056
yjdH c5131 Sensor protein dcuSchromosome CDS4906926 1632 - 0.501225
yjfJ c5266 Hypothetical protein yjfJ precursorchromosome CDS5018624 699 + 0.509299
yjiY Hypothetical protein yjiYchromosome CDS5174405 2166 - 0.561404
yjjQ Hypothetical protein yjjQchromosome CDS5192466 726 + 0.451791
ylaB Hypothetical protein ylaBchromosome CDS551717 1557 - 0.479127
yliE Hypothetical protein yliEchromosome CDS893873 2349 + 0.411239
yliF Hypothetical membrane protein yliFchromosome CDS896229 1329 + 0.428141
ymfL Hypothetical protein ymfLchromosome CDS3058346 609 - 0.489327
ynaF Unknown protein 2D_000B3L from 2D-pagechromosome CDS1652926 507 - 0.4714
yneF Hypothetical protein yneFchromosome CDS1787317 1419 - 0.488372
yoaD Hypothetical protein yoaDchromosome CDS2050069 1629 + 0.502149
yojN Putative sensor-like histidine kinase yojNchromosome CDS2600455 2673 + 0.497568
ypdA Hypothetical protein ypdAchromosome CDS2781054 1698 + 0.510012
ypdB Hypothetical protein ypdBchromosome CDS2782748 756 + 0.474868