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2024-05-06 00:31:49

Gene list

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COG category: Signal transduction mechanisms
Organism: Xanthomonas oryzae pv. oryzae KACC10331, KACC10331

Number of genes found: 208

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Xanthomonas oryzae pv. oryzae KACC10331, KACC10331
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XOO0930 conserved hypothetical proteinchromosome CDS961737 513 + 0.674464
NA XOO3528 two-component system sensor proteinchromosome CDS3796904 1197 - 0.66249
NA XOO2616 GGDEF family proteinchromosome CDS2772197 2478 + 0.66021
NA XOO1829 histidine kinase-response regulator hybrid proteinchromosome CDS1927425 2607 + 0.579593
NA XOO0629 conserved hypothetical proteinchromosome CDS652519 2721 - 0.651231
NA XOO0933 conserved hypothetical proteinchromosome CDS963460 633 + 0.64613
NA XOO3934 histidine kinase-response regulator hybrid proteinchromosome CDS4199646 1503 - 0.639388
NA XOO1057 conserved hypothetical proteinchromosome CDS1082213 750 + 0.656
NA XOO0879 conserved hypothetical proteinchromosome CDS904753 441 + 0.646259
NA XOO3875 two-component system sensor proteinchromosome CDS4139689 1011 + 0.668645
NA XOO1858 conserved hypothetical proteinchromosome CDS1960224 723 - 0.654219
NA XOO0489 conserved hypothetical proteinchromosome CDS507049 861 + 0.644599
NA XOO2294 low molecular weight phosphotyrosine protein phosphatasechromosome CDS2430088 465 - 0.67957
NA XOO3246 phosphodiesterasechromosome CDS3481403 2367 - 0.65019
NA XOO4220 conserved hypothetical proteinchromosome CDS4499045 1335 - 0.638951
NA XOO0698 sensor histidine kinasechromosome CDS718310 2037 + 0.638193
NA XOO1191 TonB-like proteinchromosome CDS1218970 1335 + 0.662921
NA XOO1879 sensor histidine kinasechromosome CDS1981372 1710 - 0.662573
NA XOO1247 conserved hypothetical proteinchromosome CDS1276230 774 + 0.662791
NA XOO1827 histidine kinase-response regulator hybrid proteinchromosome CDS1919943 3633 + 0.640242
NA XOO1440 response regulatorchromosome CDS1469857 1548 - 0.640827
NA XOO1753 conserved hypothetical proteinchromosome CDS1829804 477 + 0.647799
NA XOO3935 two-component system regulatory proteinchromosome CDS4201152 441 - 0.634921
NA XOO3041 conserved hypothetical proteinchromosome CDS3270304 294 - 0.673469
NA XOO0520 two-component system regulatory proteinchromosome CDS542228 1971 - 0.677321
NA XOO2354 conserved hypothetical proteinchromosome CDS2495642 1857 + 0.645665
NA XOO1115 sensor histidine kinasechromosome CDS1139554 2646 - 0.671202
NA XOO0766 conserved hypothetical proteinchromosome CDS780938 489 - 0.650307
NA XOO1828 histidine kinase/response regulator hybrid proteinchromosome CDS1923691 3738 + 0.641787
NA XOO4095 conserved hypothetical proteinchromosome CDS4377850 441 - 0.69161
NA XOO4265 conserved hypothetical proteinchromosome CDS4539771 432 + 0.641204
NA XOO1213 conserved hypothetical proteinchromosome CDS1240010 708 + 0.668079
NA XOO3876 two-component system sensor proteinchromosome CDS4139772 264 + 0.685606
NA XOO2982 conserved hypothetical proteinchromosome CDS3190058 1071 - 0.64986
NA XOO4619 sugar diacide regulatorchromosome CDS4920323 576 - 0.663194
NA XOO2322 two-component system regulatory proteinchromosome CDS2458499 381 + 0.627297
NA XOO3936 two-component system sensor proteinchromosome CDS4201589 1860 - 0.639785
NA XOO2323 two-component system sensor proteinchromosome CDS2459037 3453 + 0.63539
NA XOO1831 histidine kinase-response regulator hybrid proteinchromosome CDS1931162 1074 + 0.625698
NA XOO3659 two-component system regulatory proteinchromosome CDS3917313 519 + 0.682081
NA XOO1887 conserved hypothetical proteinchromosome CDS1991693 267 + 0.64794
NA XOO1045 protein phosphatasechromosome CDS1063207 1014 - 0.654832
NA XOO4201 two-component system sensor proteinchromosome CDS4477262 1443 + 0.662509
NA XOO0709 histidine kinasechromosome CDS728947 303 - 0.686469
NA XOO2564 histidine kinasechromosome CDS2717084 1227 - 0.614507
NA XOO2708 GGDEF family proteinchromosome CDS2867027 2118 - 0.647309
NA XOO1551 conserved hypothetical proteinchromosome CDS1580209 2523 + 0.641696
NA XOO3405 sensor histidine kinasechromosome CDS3631362 1197 + 0.650794
NA XOO0683 probable two-component response regulatorchromosome CDS706977 729 - 0.654321
NA XOO2562 HrpX related proteinchromosome CDS2713098 2133 + 0.652602
NA XOO3871 two-component system sensor proteinchromosome CDS4133176 1500 + 0.67
NA XOO2797 two-component system sensor proteinchromosome CDS2969880 4209 + 0.627703
NA XOO3035 serine/threonine kinasechromosome CDS3259927 2904 - 0.698347
NA XOO2222 conserved hypothetical proteinchromosome CDS2335209 198 + 0.59596
NA XOO4618 sugar diacide regulatorchromosome CDS4920252 891 - 0.667789
NA XOO1850 regulatory proteinchromosome CDS1951682 900 + 0.707778
NA XOO2614 GGDEF family proteinchromosome CDS2765694 2973 + 0.670703
NA XOO2927 conserved hypothetical proteinchromosome CDS3134842 1410 + 0.61773
NA XOO4445 conserved hypothetical proteinchromosome CDS4735104 990 + 0.658586
NA XOO3527 two-component system regulatory proteinchromosome CDS3796263 645 - 0.648062
NA XOO0026 transcriptional regulatorchromosome CDS27068 339 - 0.663717
NA XOO4457 conserved hypothetical proteinchromosome CDS4745181 864 - 0.666667
NA XOO0951 response regulatorchromosome CDS986099 1149 - 0.660574
NA XOO3437 conserved hypothetical proteinchromosome CDS3672156 921 - 0.644951
NA XOO0336 two-component system sensor proteinchromosome CDS345365 3654 + 0.665572
NA XOO0641 transcriptional regulator NtrC familychromosome CDS663484 1299 + 0.632794
NA XOO1188 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainchromosome CDS1216387 750 + 0.648
NA XOO3030 VirG-like two component response regulatorchromosome CDS3253076 780 + 0.652564
NA XOO2561 conserved hypothetical proteinchromosome CDS2710191 2787 - 0.639038
NA XOO2330 sensor histidine kinasechromosome CDS2465858 894 + 0.64877
NA XOO0422 conserved hypothetical proteinchromosome CDS428936 360 + 0.669444
NA XOO0710 histidine kinasechromosome CDS729174 1254 - 0.642743
NA XOO2798 two-component system regulatory proteinchromosome CDS2974122 987 + 0.656535
NA XOO0652 conserved hypothetical proteinchromosome CDS673251 789 + 0.659062
NA XOO4442 conserved hypothetical proteinchromosome CDS4733716 390 + 0.651282
NA XOO0934 conserved hypothetical proteinchromosome CDS963869 264 + 0.666667
NA XOO2588 response regulatorchromosome CDS2739515 381 + 0.580052
NA XOO2331 conserved hypothetical proteinchromosome CDS2467348 975 + 0.629744
NA XOO3710 two-component system regulatory proteinchromosome CDS3968159 474 + 0.64135
NA XOO0519 two-component system sensor proteinchromosome CDS539918 2310 - 0.669697
NA XOO3427 transcriptional regulator araC/xylS familychromosome CDS3660457 726 - 0.601928
NA XOO1109 transcriptional regulator luxR/uhpA familychromosome CDS1133582 639 + 0.665102
NA XOO0240 sensor histidine kinasechromosome CDS252132 1377 - 0.644154
NA XOO3988 response regulatorchromosome CDS4257135 966 + 0.643892
NA XOO4298 response regulator proteinchromosome CDS4574750 915 - 0.643716
NA XOO2834 conserved hypothetical proteinchromosome CDS3032662 309 + 0.605178
NA XOO2391 conserved hypothetical proteinchromosome CDS2549502 942 - 0.68259
NA XOO3870 two-component system regulatory proteinchromosome CDS4132334 846 + 0.644208
NA XOO1713 phage-related capsid scaffold proteinchromosome CDS1768403 843 - 0.638197
NA XOO1752 conserved hypothetical proteinchromosome CDS1828526 1245 + 0.679518
NA XOO4500 conserved hypothetical proteinchromosome CDS4797904 462 - 0.701299
NA XOO4021 histidine kinase-response regulator hybrid proteinchromosome CDS4293909 2814 - 0.658493
NA XOO1721 response regulatorchromosome CDS1782622 432 - 0.606481
NA XOO2767 ATP-binding proteinchromosome CDS2929878 1146 + 0.632635
NA XOO1189 Signal transduction histidine kinasechromosome CDS1217133 1383 + 0.646421
NA XOO1975 conserved hypothetical proteinchromosome CDS2076557 378 - 0.608466
NA XOO4016 GGDEF family proteinchromosome CDS4288309 498 - 0.630522
NA XOO2725 conserved hypothetical proteinchromosome CDS2884914 2316 + 0.627807
NA XOO2586 response regulatorchromosome CDS2737247 633 + 0.64139
NA XOO0111 conserved hypothetical proteinchromosome CDS103336 1629 - 0.669122
NA XOO2615 GGDEF family proteinchromosome CDS2769025 2922 + 0.668036
algR XOO4008 two-component system regulatory proteinchromosome CDS4280105 738 - 0.669377
algR XOO0653 transcriptional regulator proteinchromosome CDS674530 186 + 0.564516
algR XOO0651 transcriptional regulator proteinchromosome CDS673226 1308 + 0.673547
algZ XOO4009 two-component system sensor proteinchromosome CDS4280873 1053 - 0.696106
apaH XOO3750 diadenosine tetraphosphatasechromosome CDS4004614 957 + 0.660397
aphB XOO0292 phytochrome-like proteinchromosome CDS301794 1905 + 0.663517
atsE XOO0041 AtsEchromosome CDS42222 399 - 0.636591
baeR XOO1559 two-component system regulatory proteinchromosome CDS1591302 2334 - 0.651242
baeS XOO1558 two-component system sensor proteinchromosome CDS1590112 1194 - 0.668342
cheA XOO1470 chemotaxis histidine protein kinasechromosome CDS1512216 2022 - 0.641939
cheA XOO2836 chemotaxis proteinchromosome CDS3033366 2010 + 0.654726
cheA XOO2624 chemotaxis related proteinchromosome CDS2782675 1659 + 0.6739
cheB XOO1465 protein-glutamate methylesterasechromosome CDS1506196 1140 - 0.666667
cheB XOO2859 glutamate methylesterasechromosome CDS3065459 1077 + 0.65831
cheD XOO2858 chemotaxis proteinchromosome CDS3064818 645 + 0.632558
cheR XOO2857 chemotaxis protein methyltransferasechromosome CDS3064003 867 + 0.619377
cheR XOO1466 response regulator for chemotaxischromosome CDS1507332 828 - 0.613527
cheR XOO0644 methyltransferasechromosome CDS665518 1815 + 0.626997
cheV XOO2568 chemotaxis proteinchromosome CDS2720205 945 + 0.648677
cheW XOO1468 chemotaxis proteinchromosome CDS1509453 516 - 0.635659
cheW XOO2833 chemotaxis proteinchromosome CDS3031539 1023 + 0.668622
cheW XOO2850 chemotaxis proteinchromosome CDS3058639 408 + 0.610294
cheY XOO2835 chemotaxis response regulatorchromosome CDS3032967 366 + 0.620219
cheY XOO2622 chemotaxis proteinchromosome CDS2781654 393 + 0.615776
cheZ XOO2623 chemotaxis related proteinchromosome CDS2782046 627 + 0.657097
clp XOO4158 CAP-like proteinchromosome CDS4434342 693 + 0.637807
colR XOO3535 two-component system regulatory proteinchromosome CDS3802788 924 - 0.665584
colR XOO1208 two-component system regulatory proteinchromosome CDS1233979 741 - 0.618084
colR XOO3763 two-component system regulatory proteinchromosome CDS4014766 624 - 0.663462
colS XOO3534 two-component system sensor proteinchromosome CDS3801503 1329 - 0.65237
colS XOO1207 two-component system sensor proteinchromosome CDS1232197 1353 - 0.609756
colS XOO3762 two-component system sensor proteinchromosome CDS4013348 1332 - 0.646396
creC XOO1477 two-component system sensor proteinchromosome CDS1522250 567 + 0.638448
csrA XOO2938 carbon storage regulatorchromosome CDS3146351 213 - 0.577465
cstA XOO1447 carbon starvation protein Achromosome CDS1476636 2181 - 0.650619
cvgSY XOO0682 histidine kinase/response regulator hybrid proteinchromosome CDS705253 1743 + 0.654619
dksA XOO2682 DnaK supressorchromosome CDS2844922 1029 - 0.641399
exsF XOO0643 regulatory proteinchromosome CDS665017 381 - 0.629921
fixL XOO3146 sensor histidine kinasechromosome CDS3382423 366 - 0.606557
fixL XOO3147 sensor histidine kinasechromosome CDS3382758 1287 - 0.605284
fleQ XOO2589 transcriptional regulatorchromosome CDS2739892 1485 + 0.659259
fnr XOO2249 fumarate and nitrate reduction regulatory proteinchromosome CDS2365388 765 - 0.687582
gacA XOO3077 transcriptional regulator luxR/uhpA familychromosome CDS3309787 720 - 0.598611
glnE XOO4274 glutamine synthetase adenylyltransferasechromosome CDS4548860 3003 - 0.664669
hrpG XOO1379 HrpGchromosome CDS1411025 975 - 0.621538
icfG XOO4263 IcfG proteinchromosome CDS4537768 2007 + 0.659193
kdpD XOO3843 two-component system sensor proteinchromosome CDS4100382 2661 - 0.673431
kdpE XOO3842 two-component system regulatory proteinchromosome CDS4099676 783 - 0.65645
lexA XOO3442 LexA repressorchromosome CDS3678798 606 - 0.665016
lexA XOO2942 LexAchromosome CDS3151451 678 - 0.638643
mcp XOO1469 chemotaxis proteinchromosome CDS1509979 2169 - 0.639926
mcp XOO2558 chemotaxis proteinchromosome CDS2707112 1278 + 0.627543
nasT XOO3100 histidine kinase/response regulator hybrid proteinchromosome CDS3325937 252 - 0.630952
nodV XOO2378 nodulation proteinchromosome CDS2527897 1218 + 0.659277
nodW XOO2379 nodulation proteinchromosome CDS2529111 612 + 0.640523
ntrB XOO4484 two-component system sensor proteinchromosome CDS4781413 1056 - 0.682765
ntrC XOO4483 two-component system regulatory proteinchromosome CDS4779993 1449 - 0.665977
ntrC XOO4202 two-component system regulatory proteinchromosome CDS4478689 1347 + 0.670379
pdeA XOO2563 c-di-GMP phosphodiesterase Achromosome CDS2715234 1722 + 0.634727
pdeA XOO2860 c-di-GMP phosphodiesterase Achromosome CDS3066542 2346 + 0.634697
phS XOO4023 histidine kinase-response regulator hybrid proteinchromosome CDS4300062 1074 + 0.6527
phoB XOO3666 two-component system regulatory proteinchromosome CDS3922086 690 + 0.66087
phoP XOO0423 two-component system regulatory proteinchromosome CDS429367 684 + 0.593567
phoQ XOO0424 two-component system sensor proteinchromosome CDS430080 1416 + 0.638418
phoR XOO3667 two-component system sensor proteinchromosome CDS3922833 1344 + 0.66369
pilG XOO1746 pilus proteinchromosome CDS1817943 564 + 0.58156
pilH XOO0911 regulatory protein pilH familychromosome CDS940484 387 + 0.583979
pilH XOO1747 PilHchromosome CDS1818524 363 + 0.592287
pilI XOO1748 pilus biogenesis proteinchromosome CDS1818883 534 + 0.638577
pilJ XOO1749 pilus biogenesis proteinchromosome CDS1819456 2037 + 0.64703
pilL XOO1750 PilLchromosome CDS1821606 6273 + 0.662363
pilL XOO1751 PilLchromosome CDS1826572 1989 + 0.663147
pilR XOO1591 two-component system regulatory proteinchromosome CDS1630958 1452 - 0.652204
pilS XOO1592 two-component system sensor proteinchromosome CDS1632680 1929 - 0.662519
prpR XOO0891 propionate catabolism regulatory proteinchromosome CDS915609 1776 - 0.653716
ptc1 XOO3036 phosphoprotein phosphatasechromosome CDS3262827 723 - 0.692946
ptsK XOO1281 HPr kinase/phosphatasechromosome CDS1314244 951 - 0.656151
ptsN XOO1282 nitrogen regulatory IIA proteinchromosome CDS1315191 432 - 0.703704
regR XOO2227 two-component system regulatory proteinchromosome CDS2341259 567 - 0.659612
regS XOO2228 two-component system sensor proteinchromosome CDS2341822 1302 - 0.673579
relA XOO1736 ATP:GTP 3'-pyrophosphotranferasechromosome CDS1802201 2298 + 0.666667
rpfC XOO2870 RpfCchromosome CDS3080330 2178 - 0.62259
rpfG XOO2871 response regulatorchromosome CDS3082872 1260 - 0.628571
rrpX XOO2787 transcriptional regulatorchromosome CDS2952794 1299 + 0.615089
smeR XOO4341 two-component system regulatory proteinchromosome CDS4619834 744 + 0.700269
smeS XOO4340 two-component system sensor proteinchromosome CDS4619430 408 + 0.705882
smeS XOO4339 two-component system sensor proteinchromosome CDS4619197 237 + 0.658228
spoIIAA XOO4264 anti-sigma F factor antagonistchromosome CDS4539734 885 + 0.629379
spoT XOO1149 pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS1171041 2172 + 0.635819
stkXac1 XOO3451 serine/threonine kinasechromosome CDS3686528 1575 + 0.627936
styS XOO0737 histidine kinase-response regulator hybrid proteinchromosome CDS755674 150 - 0.626667
tcsR XOO4543 two-component system regulatory proteinchromosome CDS4841501 906 - 0.62362
tctD XOO1105 two-component system regulatory proteinchromosome CDS1130221 894 + 0.635347
tctE XOO1106 two-component system sensor proteinchromosome CDS1131050 1443 + 0.656272
tlpC XOO2204 methyl-accepting chemotaxis proteinchromosome CDS2315875 1893 - 0.600634
torS XOO3709 two-component system sensor proteinchromosome CDS3967341 831 + 0.646209
tspO XOO2241 tryptophan-rich sensory proteinchromosome CDS2354985 291 + 0.652921
tsr XOO4020 chemotaxis proteinchromosome CDS4293156 228 + 0.657895
tsr XOO2847 chemotaxis proteinchromosome CDS3051758 2262 + 0.628205
tsr XOO2844 chemotaxis proteinchromosome CDS3046089 2313 + 0.627324
tsr XOO2838 chemotaxis proteinchromosome CDS3037476 690 + 0.63913
tsr XOO2840 chemotaxis proteinchromosome CDS3039181 2418 + 0.643921
tsr XOO2845 chemotaxis proteinchromosome CDS3049090 2076 + 0.632466
typA XOO0973 GTP-binding elongation factor proteinchromosome CDS1004266 1830 + 0.624044
vieA XOO1467 response regulatorchromosome CDS1508143 1302 - 0.662058
virA XOO3032 VirA-like proteinchromosome CDS3254841 2460 + 0.658943
ygiY XOO0057 two-component system sensor proteinchromosome CDS52197 318 + 0.694969