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# Cupriavidus necator, H16

>PHG228 conserved hypothetical protein
MYQRILLAVDGSRSSDLALSQAIIVAKATGAEVKALFVLDDSDIYFETSY
FDPKELLDNIMADGRKALDAATARLSEAGVGNTAQLVEKPVSPGRISLTI
VGEADAWNADLIVLGTHGRRGVRRLLMGSVSEGVIARTSKPVLLVRSETE
G
>PHG119 putative methyltransferase
MPACPRRASASTRSTLAPVRWRARHGEYGGNAFRSGPLDFRDRYFTAGPA
GYALDPRVRAQVRLPIHTTVVTDSPSATASWPERP
>PHG118 putative methyltransferase
MPEEQGLGHHHRLEPYSIAIALLDAGVPTARFRIDAVDVSARALARAPWR
VRRQRLPQWPAGFP
>PHG081 putative sensor of two-component regulatory systems
MDTLRSCLDEVGRLTLLVEDLLMLARLDAGQEHPSGQTVALNAVVQETLR
RVEPSARERQITLVVNATSPVDGKVARGPVSLVLANLLDNALKFSPPGGK
IIVDCATDQLDAVLSVADEGPGILESELPYLFDRFYRGAGARAGTAEGVG
LGLALSQEVIRAYGGHIEAGNVPGSGAVFSLRVPLAA
>PHG278 putative sensor kinase
MRVLLLVLLAILPMLLLILATNLEERHAAEKRVQEDTVRLLHLTISQHER
FIEGSRQLLIALAQIPVVHDRSEAACSTLFGNFLKQYPFYANLGAADLEG
NVYCSGLRLAEPVNLADRGYFQRALQYKGLAIGDYQIGRITGKASVNFGY
PILDETGSPKGVVYAALDLRWLEQLAVEARLPPDAVLIVLDRHGTVLFEH
PDWRRWMGVAAAGNPLVEAILSHQEEGTVELPNLEGVTSLFAFAPLRSAR
GVVITTQGYLAVGIPTSVAFAQVNRAFAYRLLFFSAVALLALATAWWFGA
VFILRPARALLAATERLEEGDLQARTGLLPGHGELSQLAGSFDRMAERLQ
EHQAQLRHALTETTELKDLLDNVFASIVSGVITTDLQGKIMLCNLAALPI
LGYREAEELVGRNIVELQPPLGLALLSHVLSTARTDKPVIGLELAPTVTG
RGTVYLRFNLSTLKGLQQPQGIAIVLDDVTEKRLMEAQQQLLKHMVSPAI
LAQIDTEHLQPAGKRTEITTLFADIHGFTGISEQLNPDDLFGLLNRYLGV
MTDAVLAQEGTIDKFLGDAVMAWFNAPIPQPDHVMRALRTALGIREAIQA
LYQQISPLFHLSVGIGLHVGEAVLGLVGGKQRMEYTAIGDDVNIAKRIQE
HAGIDQILISAAVYARVQDQVIVRPVTVIQVKGRQKPLEVYELLGLK
>PHG107 putative kinase
MALDISNLPQEAISALKQFPEFEIASFNDSGANGYVLIGRHSVLQKEVAI
KIYFHGESDIDQEPTIIAKINHENVLKVYDARKVGKDCSYFMTPAASEGD
LANFLDTYFISLPLAHKLLCQLLSGIAALHMSPNLLVHRDLKPENLLVHN
DNLLIADFGSVRRIDEKTGSAPASKHSILYRPPEAFGEDSFFNFSSDIYQ
AGLIGFLLFGGSLSNDLLSYLTKKQKSELTGIQGGYELSIYVDSCIEKKV
SRGNLADFSTLPFYIPAAIKRTLRAAISSADKRYSSVSEFLAELSRLRGN
MPDWSTRREGVLLRNWNGLDYRIPHDEVAILKCKSGAEKYRYDKSYNCGS
YAELFDQMKERLGLP
>PHG185 putative regulatory protein
MPGAPDTAAQIHAVIRARGGFNINQLVAEYRALRASVLRLWMDEFELVAG
DLDDVMRFNEAIDQAVAESVDFFNAEVEQSHNLLLGMLGHDLRSPLQTIQ
MTASYLAALNAGEKVSEAAARLIRSGASMNSLLDDLCDFNRTKLSLGINI
APIEVGLAHVVGDTVDQLRAAHPDRRIDLEMNGNALGVWDGLRLQQVVSN
LVLNAIRYGAPDAPVRVVLTGDDTEVHLAVRNSGPAIDQLTLARMFDPLS
RGPDPEDKHAHGLGLGLGLGLYIASEIARAHHGSIDARSDQAETAFEVRL
PRRASQTT
>PHG262 dnrD, transcriptional regulator
MADPIPFARMPLFRGIDAEVLDALRQAATPQHLRKGEFLFRRGEACQGLY
VVVEGLVKLALPTAPASERTLERAIEVFGPGAIFGEDALFLDAPQVADCQ
AQARTTVLHVSKLALWGAVERDPLVSTQLLRNLSGRLHTLMRDIEAVSLQ
NALQRVASFLHEQAQAGRRTWLACTQRVIASKLGVTPETLSRVMSRFSAQ
KLVKLERGKIFLLDAEGLARQVAASNER
>PHG276 fnr, transcriptional regulator
MIVSRDQSCRFQLLPSVPITEMSPRCSTCTMGQLCLPMGMSQQDLARMDT
LVQERIRVQKGETLYRMGDPLAAVYAVRFGTLKTHVTTEDGRSQITGFYL
PGEIVGLDGLGEMQHASDAAALEDTEVCVVRLNDLQSLSADLPSLQHQFL
RLMGKEITRDQLMLVMLGAMRAEERLAAFLINLSERLSARGYSASEFVMR
MSREEIGSYLGLKLETVSRLFSRFAEAGLIQIRQRHVKLVDIAGIKELYS
RSC
>PHG019 hoxA, HoxA
MSDKQATVLVVDDETRSQDALRRTLDEEFRVLTVSSADEARALLLRQPVS
VILCDQRMPGLTGVEFLKEVRERWPEIVRIVISGYTDSEDIIAGVNEAGI
YQYILKPWVPDHLIDTVRQAVEAQGLQGDMHRLDLELRTSTPVLRQRSSQ
KLASAQSAFNFERIVRAPGSPLDAVCEVAARVARYDLPVMVLGESGTGKE
LLARAIHYASPRAARAFVSENCAAVPDNLLESELFGHKRGAFTGAYEDHA
GLFQRANGGTIFLDEIGDTSPAFQVKLLRVLQEGEVRPVGSPRWIPVDVR
VIAATHCNLESDVHAGRFREDLYYRIAGVTISMPPLRERSGDLQPIAAKL
LEQVAQELARPGLYFGGDALAAMMAYPWPGNIRELRNEIYRAVALSSGEE
IRAQLFSRKVLHGQPGTVKRGPHVQTFPQSGTLQERLDAIEAVVLKEALL
RHRWNKTHAAKELGLSRVGLRQKLLRFGLEEK
>PHG093 hoxI, HoxI
MKEQEIDRIATMIYEAPLGEYIGRDGAAILAEHAAEARLLKGDEFLYRRG
DVTSSFYIVTDGRLALVREKTNERTAPIVHVLEKGDLVGELGFIDQTPHS
LSVRALGDAAVLSFSAESIKPLITEHPELIFNFMRAVIKRVHHVVVTVGE
HERELQEYISTGGRGRG
>PHG022 hoxJ, histidine protein kinase
MSSKRTTTSSGSHGVDLDAMTPSQLEGIDEATWLDVIRKMDEVYLQLIED
EVALEEKNAQLEQSQQFIFSLLSAMSDVLVACNARGEIEETNVALRELVG
MQESALHGMSIYQLLADDDSAATLRTVIDNVGPGRSFNVVELNLFDAERS
IVPVDVSCTPRIGPNGRREGYVFVGRPMAEIKRAYHQLREAHEALKRTQQ
QLLHAEKMASLGRLVAGVAHELNNPISFVLGNVHALKRYSERLAAYVALL
HSGEDGAEAERQRIRLRIDHILQDMPSLIEGTLEGAQRTADIVRGLTRFS
AVDREEPSVFDLSEVVKRAIHWVKKGTAPTFEVHWSPLPGCLVMGSAGHV
QQVMMNLIQNAYDAAGSRDDAVPALWIALDRLDDRVVLRFRDNGPGIAAE
HLARVFDPFFSTKPVGKGTGLSLSISYGIVERHGGRLLVRNHPEGGAEFT
VELPAAHDKGSSADRR
>PHG266 narL, nitrate/nitrite response regulator
MTICILLIDDHTLFRSGIRALLQRQADFEIVDEAADGVEDIKRAKQRRPD
VILLDLNMPGLSGLEALQLLVEDLPDSAVIVLTVSEEAEELAIALRSGAR
GYLLKNIETEALTSAIRRAAAGEPVISESMTAKLVAQFRAPAPAAVAVPQ
QVDTARLTVREREIVQELARGESNKEIARTLGVAASTVKIHVQNILKKLN
LASRVQVAVYAVEHRLTETG
>PHG265 narX, transmembrane nitrate/nitrite sensor kinase
MPDSGADLATLPALRHRLSTRIISLSLASLLVVLAMIAGTLWLSWKLEGA
GAAINDAGSLRMRANRVAIELTLSQAGKPNALDDQIAALDNTLAQLRKGN
PARPLFLPDEPAIHAQLDRVVDGWQHRLKPLARAGGLMAGQATTAYIDAL
PSFVTQADRLVGMIEHVSASKTDLLRVSQAGLAAMACVGTVAVIYLLYLW
IILPVLRLQDGLRRMAAREFSLRLPVETRDEFGTLNEGFNRMASELQDLY
RDLEARVAQKTAELAHQNRDLETLYEMAAFLNQATDAEAMCNGFLQRVMR
QFDADGGSVRAFDDVRGKLPLMTSIGLPAALSGAAQCVSVKACHCGDATT
QSVIAIQDLRHAPARAAGPVSPSPCTRNGFQALAAFRIGSLRGATGVFAL
HFREPRELPPSDRQLLETLGRHLGTALEQLRLSDSARQLAVVEERNLVAQ
GLHDSIAQGLNFLNLQVQLLADAVGRDDLPEAREIVPMLRHGVEESYQDV
RELLNNFRSRLTPGELRPAVEATVERFRRQCRTEATLIVDDGGDVLPLHP
EQQLQVLFILQEALSNVRKHALAAHVTVRLSHGRDFRLVVHDDGEGFDPA
DLAQRSDAHIGLNIMRERAARLNARLQIDSQPGAGVRIALLLPRGEQQPD
AMAASQLQNTFP
>PHG246 norR, sigma 54 dependent transcriptional activator
MTPMYPELLTDLVTDLPHAVRLQRLVSGLRTHFRCGAVALLRLEEEHLRP
VAVDGLVRDTLGRRFAVSLHPRLAAILARRDVTCFHHDSMLPDPYDGLID
EHVGEPLPVHDCMGTSLHLDGRPWGVLTLDALTVGTFDAAAQAELQRLTV
IVEAAIRTTRLEAEIRALQLARGKQPDGEGPADDGEIIGQSQAIAGLLHE
LEVVADTDLPVLLLGETGVGKELFAHRLHRHSRRRGHPLVHVNCAALPES
LAESELFGHARGAFSGATGERPGRFEAAAGGTLFLDEVGELPLSIQAKLL
RTLQNGEIQRLGSDRPRRVNVRVIAATNRNLREHVRDGSFRADLFHRLSV
YPIPIPPLRERGNDVLLLAGRFLELNRARLGMRSLRLSAAAQDALRRYRW
PGNVRELEHVISRAALRCVSRGADRNDIVTLEAELLDLDGLELPAGSAHH
AAEAAIAHPALPTGATLREAVEQTQRACIEQALRAHDGSWAKAARQLGMD
ASNLHKLAKRLGSK
>PHG380 pemI, putative PemI-like protein
MRKSATLTIQKWGNSLAVRIPTAVARSAHFAEGQEVEVSVDEIGVTVRPV
GRRALTLAEKLALFDPIKHGGEAMATQRVGAEAM
>PHG381 pemK, putative PemK-like protein
MAGKLWAPERRDIIWIDCNPQAGREMKDMHPMLVLSPRPFNERTSIVIGL
PMTTAAYNETNPFAIKLQGPKGKDSYVLAHQPKSFDWRARNAKAHPWKQA
PLEVFAAACEQLNQIIAIAE
>PHG383 tutC, putative regulatory protein
MASISLVFPDSRQLRVRDVTLCTSDDFQTQRDKLARIMLDAMYQFVGLLD
VHGTMLEINRAALEAIGIRMDDIRGKPFWEARWWVVSPETQALLRELIQR
ASQGEFVRCDFENYGQAEGEEKIIVDFSLLPIRDSNGNVVFLLPEGRNIT
EKKRAEAALALKNEELQASWELIRRQRDELQSLYDRILAEQKLSERLLLN
LLPYPIAERLKARPDLIASGVPELIADSFPEVTVLFADIVAFTRFSAGMS
PEQLVAILNEIFTEFDTIAEVRGLEKIKTIGDAYMAAAGLPEPAPDHAVR
AAHMALNMSDALMHFNQHTGFNLQMRIGINSGAVVAGVIGKRKFIYDLWG
AAVNIASRMESHGVAGRVQVTDATRRLLGESFQFEERGSIEAKGIGALHT
WFLTGRNDAVFA