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# Chlamydophila pneumoniae TW-183, TW-183

>CpB1057 hypothetical protein
MLRATSELCFGILTQSECALTQALPPKEKPLQEEQFLVKNGILMRSTSLP
NLKPGQSQQTSLASHRNPLAQQSTSSNSTGKASTETTSSSFPFFSCKAPE
GDSSVDKTFTVSVQTPKAQEQQEASASQSQAQFHVRSYSSSTIKEHSAKE
KVSQSTKSAETQKHTQTKSDATLSPMSLYSTLHKEVPQALSSTKSQQKDE
EHRDQRQQEGYEQEQEQEEGKKKTPWCTVESLQQTSSSNQVYESYTPIIP
DPIVEFALSESQLSVLAGKRVTNLDVLRICTELMKLMLKSRANDTMTRLE
ERELMEREAHELAASYSRQAKYARWLGIATATLGILGAIAPMVGEISGDS
ILGFVQRISGRFKDATAKTFFKGIGKVFTSLSQLTEAASKVHELSESAVR
AVAEYRKEVFRMRQDEVTRTIEEVKDNWKSMDNFLLNILQTEHDAARSLY
Q
>CpB0555 general stress protein 160
MPLSDDEIEQFKKRLLEMKAKLSHTLEGNAQEVKKPNEATGYSQHQADQG
TDTFDRTISLEVTTKEYELLRQINRALEKINESSYGICDVSGEEIPLARL
IAIPYATMTVKAQEQFEKGLLSGN
>CpB0409 hypothetical protein
MDFDYFGLSDIGRVRARNEDFWQVNLMSQVVAIADGVGGRLGGDIASQEA
VTSLMELIDEQQSKLMGYEDDQYKETLKKILLEVNGVVYEHGQMEEHLQG
MGTTLSFIQFRKDRAWLFHVGDSRIYRIREGELRRLTEDHSLENQLKNRY
GLPKQSDKVYSYRHILTNVLGSRPYVMPDIRNLPCEKEDLYCLCSDGLTN
MVPDIDIRDILNQPATLEERGNALISLANTRGGDDNATVVLVRIQ
>CpB0104 hypothetical protein
MRMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLPSSFTGEIKGNHVR
MRLAPHTDGTIIREFSKGDLVAVIGESKDYYVISAPPGITGYVFRSFVLD
NVVEGEQVNVRLEPSTSAPVLVRLSRGTQIQPASQEPHGKWLEVVLPSQC
VFYVAKNFVANKGPIELYTQREGQKKIAMDLINSALNFAHIELEKSLNEI
DLEAIYKKINLVQSEEFKDVPGIQGLIQKALEEIQDAYLSKSLESQNTSI
ASSQCSTPKVSSSEVTTSLLSRHIRKQTALKTAPLTQGRENLEYSLFRIW
ASMQQGNDHSEALTQEAFYRAEQKKKQVLAGVLEVYPHVVKNNPGDYLLK
AQENTIAFLYGTSINLEQWLGKRVTVECLPRPNNHFAFPAYYVVGIKEAS
>CpB0069 F25H5.5
MIKKFFIYSLIFSCSFSAPLKGICNEDVSSQSRIEEDPEVLITQLNELIE
TPIEEGKEIRNELQAISDGQKSSEEIEESCGTSDSEGLSEKTDKESSNEY
VLDFFDSMVQRLEGISKMCQSGQVAQIIDCFNREFDIRNRELELKNRELE
LREKDLEFKKSILDWNKEKVSRELAFQREQDIKQTLMLLKK
>CpB0303 cAMP-dependent protein kinase type I regulatory subunit
MNLIDRAFLLKKTIIFQSLDMDLLLTIADKTETIIFKPGSNVFSIGQPGF
SFYIIVEGYITISKEKLESPLNLKPLDCFGEESLFNNKPREYNASANTQV
RMLVLSKGQILNIVEECPSVALSFLELYAKQIKFREP
>CpB0793 transcriptional activator Trip230 protein
MKKWISILILSFLSLLSILPVLAITINHVKISQRWSDLNSQILTLKVIRD
HEDQVIKHNARISKDRNNLSIESLNASCKQLRPLSKERERLNKLNSNSLL
AQSKEVWERKRALEKSNHQLVWNCEQMHNDFAFVRLEQATEMDNEDIESL
FSLFNPENPVAPLVFFTCWKMTKQTTPLGNEVWLTHAEAISRWI
>CpB0149 protein kinase
MESEKDIGAKFLGDYRILYRKGQSLWSEDLLAEHRFIKKRYLIRLLLPDL
GSSQPFMEAFHDVVVKLAKLNHPGILSIENVSESEGRCFLVTQEQDIPIL
SLTQYLKSIPRKLTELEIVDIVSQLASLLDYVHSEGLAQEEWNLDSVYIH
ILNGVPKVILPDLGFASLIKERILDGFISDEENRESKIKERVLLHTSEGK
QGREDTYAFGAITYYLLFGFLPQGIFPMPSKVFSDFIYDWDFLISSCLSC
FMEERAKELFPLIRKKTLGEELQNVVTNCIESSLREVPDPLESSQNLPQA
VLKVGETKVSHQQKESAEHLEFVLVEACSIDEAMDTAIESESSSGVEEEG
YSLALQSLLVREPVVSRYVEAEKEEPKPQPILTEMVLIEGGEFSRGSVEG
QRDELPVHKVILHSFFLDVHPVTNEQFIRYLECCGSEQDKYYNELIRLRD
SRIQRRSGRLVIEPGYAKHPVVGVTWYGASGYAEWIGKRLPTEAEWEIAA
SGGVAALRYPCGEEVEKSRANFFTADTTTVMSYPPNPYGLYDMAGNVYEW
CQDWYGYDFYEISAQEPESPQGPAQGVYRVLRGGCWKSLKDDLRCAHRHR
NNPGAVNSTYGFRCAKNIN
>CpB0157 kdtA KDO-transferase
MKLLKASFIKLLLTLDWPTELLLKNRPFDFTGHPEEEKLIKDILLKEEGN
KYFSLESKKLLARHMMHNIVVLSEEPGRSAFLGRTAFFPNKYPIAQGGVG
IPSTIGNLFTIWYCFYFYRAATPQSDHPDGCGFILLERLKELGAGFFYCD
LRESNTTGFTLFFEGSNKGVLKNHLFIRDE
>CpB1043 hypothetical protein
MWIIDPLSAKKPLQAAINVPGTPITGGPNTATADDIIAKFSKDSNPLIVT
VYYVYQSVLVAQDNLSIIAQELQANSSAQTYLNNQEALYQYVSIPKNKLN
DNSSSYLQNIQSDNQAIGASRQAIQNQISSLGNAAQVISSNLNTNNNIIQ
QSLQVGQALIQTFSQIVSLIANI
>CpB0730 serine/threonine-protein kinase
MDCRGGIPLPEPQVIGGYHVKKILSKKLRSRVVHGLHPETRHSTVIKVFS
PSPSFTSRSVYNFLKEAQSLHQITHPNIVKFHRYGKWQDCLYIAMEYIEG
ISLREYILAQFISLPQAIDIIFDIAQALEHLHSRNILHKDIKPENILITP
QGKIKLIDFGLADWDTEIQRAHPSVIGTPYYMSPEQRQGESHSPASDIYA
LGLLAYELILGHLSLGRVFLSLVPERISKILAKALQPSPNNRYSSTREFI
QDIHHYRMSGDMQEDLRIKDHTVALYEQLQTQRFWLAPETLRFPDFISGV
LYHQGYPLYPHAYDTLLEGDVFNLWLGYSPISNATIALSVVKSLVCQQDL
QRPLLDRVCEINECLIRMKIPIDEMGISILCLEISKENKELSWVACGKTV
FWIKRQGRVVQDFESFSPGLGKITSLQIRETKVAWEIGDEAVVCTLELEE
SVASLKTLSLAELQDRRQKAIFCPIESIHGGIQSRQHGSNSPSTLISLKR
IR
>CpB0696 putative sigma regulatory factor-histidine kinase
MLNRYTMTFFEGETVFPAVLSELHSMLDLIKRAGKQSKCPQEKLLKLELA
CEELLVNIISYAYQGENSPGTIAISCISHRGDLEVVIKDHGPSFNPLAVS
INIQEDLPLEQRKLGGLGIFLAKSSVDEFLYAREDHCNIVHLKMLNGQHS
>CpB1042 hypothetical protein
MSIQPVSNTTTKADKVIPDSTKVISDSITINKQSAFYFCISVMLRLSEST
TEYGKSILAVLEDNTIVQQQRVKELINLPLLKVPDLQKKDGSDDEYKNQN
EIQAYQSSNQQISANRQMIQQELSSAQQRAQANQKSVNSTTIESMQILQA
TSSMLSTLKELTIKANLTNSPSD
>CpB0779 hypothetical protein
MFRCILFGIFLLTCFSSGGVLYYLFCSHDFSIGPKEKSRSVWIEEEKEFT
DSVLHHLPSQHQHLHILCFQGFLLQKQQKFSQAEKIFSKVYDEAQDGPFL
FKEEILGSRLINSFFLEKTDVMETILCLLNQRCPNSPYYHLFKALVCYKQ
KLYREVIEQLAYWQEEKTRALAPLLNISIEQLLTDFLLDYISAHSLIEQK
MFPEGRVILNRNINRLLKHECEWNAKTYDRIAILLSRSYFLELVESKSAD
IYFDYYEMVLFYLKKIYILEQCPYAELLPEEELVSLIMEHVFILPKDKLY
PLIQLLEMWQKHYVHPNSSLVVQILVDRFSTHMEGAIRFCEALVSFSGLE
ELHQQIITTFEELLSNKVQQIKTEEAKQCVALLHILDPSISISEKLALSS
DTLQNIVSGDDEQHTKLRNYLDLWEAIQSYDIDRQQLVHHLVYGAKDLWK
KGGNDEKALNLLQLVLRFTSYDIECESVVFLFIKQAYKQALSSHAIARLL
KLEKFISEANIPSIVISEAEKANFLADAEYLFAHEDYDKCYLYSMWLTKV
APSPQSYRLAGLCLMENKRYDEALEFLCMLSPNDSINDYKTQKALAFCQK
HQSKDRAAS
>CpB0532 sigma F regulatory factor
MSDIQKEEHGSTTIFHLHGKLDGISSPEVQENISQSLAAGSKNIILDCAH
LDYMSSAGIRVLLQSYHQVGQHSGKIVLTTVPKTIEQTLYVTGFLSYFKI
FNTVDEAIQTLNKDGD
>CpB0941 sigma-F 5-region regulatory protein spoIIAA
MERLLMNLSAKEYGDIIVIYLQGSLDAVSVPSVQEYLEQFIQKKHLKIAL
NFTDVSYISSAGIRLLLSNFKLVQSLGGKMCLCCVKESVTEVMRIAGLDQ
LILLCQSEQECLSKL
>CpB0502 arginine-binding periplasmic protein 2 precursor
MPLSLTSCESKIDRNRIWIVGTNATYPPFEYVDAQGEVVGFDIDLAKAIS
EKLGKQLEVREFAFDALILNLKKHRIDAILAGMSITPSRQKEIALLPYYG
DEVQELMVVSKRSLETPVLPLTQYSSVAVQTGTFQEHYLLSQPGICVRSF
DSTLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRLELPPECWVLG
CGLGVAKDRPEEIQTIQQAITDLKSEGVIQSLTKKWQLSEVAYE
>CpB0628 glutamine-binding periplasmic protein precursor
MKIKFSWKVNFLICLLAVGLIFFGCSRVKREVLVGRDATWFPKQFGIYTS
DTNAFLNDLVSEINYKENLNINIVNQDWVHLFENLDDKKTQGAFTSVLPT
LEMLEHYQFSDPILLTGPVLVVAQDSPYQSIEDLKGRLIGVYKFDSSVLV
AQNIPDAVISLYQHVPIALEALTSNCYDALLAPVIEVTALIETAYKGRLK
IISKPLNADGLRLAILKGTNGDLLEGFNAGLVKTRRSGKYDAIKQRYRLP
>CpB0610 atoC, acetate metabolism regulatory protein
MNPSRGENMAIKNILVVDDEPLLRDFLSELLTSQGFIPDTAENLRNALQM
IRSRDYDLVISDMSMPDGSGLDLIKIIKQSSPHTPVLVVTAYGSIENAVE
AMHQGAFNYLTKPFSSEALFAFISKAEELKNLVHENLFLHSQTTPDSHPL
IAESKAMKDLLAIAKKAASSSANIFIHGESGCGKEVLSFFIHHNSPRANH
PYIKVNCAAIPETLLESELFGHEKGAFTGATTKKAGRFELAHKGTLLLDE
ITEVPVNLQAKLLRAIQEKEIEHLGGTKTLSVDVRILATSNRKLKEAIDD
KSFRQDLYYRLNVIPLHLPPLRDRQDDILPLANYFLNKFCRMNNTPLKTL
SPKAQELLLNYPWPGNIRELSNVLERVVILENTSLLTEDMLALA
>CpB0608 atoS, AtoS
MNVPDSKNLHPPAYELLEIKARITQSYKEASAILTAIPDGILLLSETGHF
LICNSQAREILGIDENLEILNRSFTDVLPDTCLGFSIQEALESLKVPKTL
RLSLCKESKEKEVELFIRKNEISGYLFIQIRDRSDYKQLENAIERYKNIA
ELGKMTATLAHEIRNPLSGIVGFASILKKEISSPRHQRMLSSIISGTRSL
NNLVSSMLEYTKSQPLNLKIINLQDFFSSLIPLLSVSFPNCKFVREGAQP
LFRSIDPDRMNSVVWNLVKNAVETGNSPITLTLHTSGDISVTNPGTIPSE
IMDKLFTPFFTTKREGNGLGLAEAQKIIRLHGGDIQLKTSDSAVSFFIII
PELLAALPKERAAS
>CpB0061 fruA, PTS fructose-specific enzyme IIBC component
MVILEQAKMPSYCQNQQDFSLFSLLSPRLVMFLGKHSRDEILQDLTDLVD
AAGLLEDKQAFFDALVRRENIMSTGIGMGVAIPHGKLESCSNFFIAIGIH
TQGILWDAIDGALVRLVFLIGGPENAQAEYLKLLSTLTLSLREESRRQQL
LQVNTIEEVMNVFVGM
>CpB0095 pkn1, Pkn1
MERYDIVRIIGKGGMGEVYLAYDPVCSRKVALKKIREDLAENPLLKRRFL
REARIAADLIHPGVVPVYTIYSEKDPVYYTMPYIEGYTLKTLLKSVWQKE
SLSKELAEKTSVGAFLSIFHKICCTIEYVHSRGILHRDLKPDNILLGLFS
EAVILDWGAAVACGEEEDLLDIDVSKEEVLSSRMTIPGRIVGTPDYMAPE
RLLGHPASKSTDIYALGVVLYQMLTLSFPYRRKKGKKIVLDGQRIPSPQE
VAPYREIPPFLSAVVMRMLAVDPQERYSSVTELKEDIESHLKGSPKWTLT
TALPPKKSSSWKLNEPILLSKYFPMLEVSPASWYSLAISNIESFSEMRLE
YTLSKKGLNEGFGILLPTSENALGGDFYQGYGFWLHIKERTLSVSLVKNS
LEIQRCSQDLESDKETFLIALEQHNHSLSLFVDGTTWLIHMNYLPSRSGR
VAIIVRDMEDILEDIGIFESSGSLRVSCLAVPDAFLAEKLYDRALVLYRR
IAESFPGRKEGYEARFRAGITVLEKASTDNNEQEFALAIEEFSKLHDGVA
APLEYLGKALVYQRLQEYNEEIKSLLLALKRYSQHPEIFRLKDHVVYRLH
ESFYKRDRLALVFMILVLEIAPQAITPGQEEKILVWLKDKSRATLFCLLD
PTVLELRSSKMELFLSYWSGFIPHLNSLFHRAWDQSDVRALIEIFYVACD
LHKWQFLSSCIDIFKESLEDQKATEEIVEFSFEDLGAFLFAIQSIFNKED
AEKIFVSNDQLSPILLVYIFDLFANRALLESQGEAIFQALDLIRSKVPEN
FYHDYLRNHEIRAHLWCRNEKALSTIFENYTEKQLKDEQHELFVLYGCYL
ALIQGAEAAKQHFDVCREDRIFPASLLARNYNRLGLPKDALSYQERRLLL
RQKFLYFHCLGNHDERDLCQTMYHLLTEEFQL
>CpB0106 psiH, phosphate starvation-inducible protein
MRTQMKKTMVIDTSVFIYDPEALFSFENTRIIIPFPVIEELEAFGKFRDE
SAKNASRALSNIRLLLENAKTKVTDGVLLPSGSELRIEVAPLSNDDRRGK
LLTLELLKIIAKREPMVFVTKSLGRRVRAEALQIESRDYESKRFSFRSLY
RGFRELQVSQEDIENFYKNGYLDLPLDVVPSPNEYFFMSAGENHFALGRY
YVSEGKIIALKAMDKSVWGIKPLNTEQRCALDLLLRDDVKLVTLIGQAGS
GKTILALAAAMHKVFDKETYNKVLVSRPIVPMGRDIGFLPGLKEDKLMHW
MQPIYDNMEVLFSINQMGNSSEALQALMDAKKLEMEALTYIRGRSLPKAF
IIIDEAQNLTPHEIKTIISRAGKGTKIVLTGDPTQIDSLYFDENSNGLTY
LVGKFHHLALYGHMFMTRTERSELAAAAATIL
>CpB0062 ptsN, phosphotransferase system enzyme II
MDLKLDEVASLLDVSEHTVLQWLKEGAIPSYSMNNEYRFSREEIEDWLLH
NQALMIQERGEDKEALKDLSLKYSLYKAIHRGGVLCDVVVHSKEEALQYA
SKYIAQKFQLDESVLFEMLSHRENLMSTGIGEGIALPHAKDFLINAYYDI
VVPMFLAEPIEYGALDGKPVGILFFLFACQDKSHLNLVNKIVHLGMSLNA
RSFFKNYPNKDQLLAYVKEWESQTH
>CpB0821 rsbU, RsbU
MIPFTKTIGFRLWLACAVAIIAPLGINIVWLNLDQYRTIVSAISTALKEN
AAFKANTLTQIVPLNVDVLSLFSDVLDLDAGIPETPNVLLSNEMQKVFQG
IYNEISLIKVFPNGDKIVVASSIPEHLGENYNHKIDIPKNTPFLAALKQS
PKNQEVFSVMQANVFDAKTQELQGILYTTFSAESLLKDLLINKQSYLTVK
TAILSKYGVILKASDPALHLHTVYPDMTKEKFCQVFLNDDPCPIDSELGP
LTLSPLDIGENFYSFKIKDTEIWGCIENVPSIDIAVLSYAKKEESFAPLW
RRARMYTAYFFCILLGSLIAFIVARRLSLPIRKLATAMIESRKNKNCLYT
DDSLGFEINRLGHIFNAMVENLHKQQHLAKTNFEMKENAQNALHLGEQAQ
QRLLPNTLPSYPHIELAKAYIPAITVGGDFFDVFVVGEGSKARLFLIVAD
ASGKGVNACGYSLFLKNMLRTFLSRSSSLQQAIQETSRLFYNNTKNSGMF
VTLCVYCYHQTSNTMEYYSCGHPPACYLDPDGETSWLFHPGMALGFLPEV
ANITSKLFHPKPGSLFVLYSDGITEAHNNNNDMFGEERLQAAIQGLTGKS
AADAVHRLMLSVKTFVGNSHQHDDITLLILKVLES
>CpB0778 tctD, trans-activating transcription regulator
MIGDKIILFVTEDLSLSSQLKDLASQRSDYQILVSPVFPTSFESVAIFCE
YLLLPEQIFSPGIFPEEDLIVLFDTFQEEAITKVLNQGATGYLLRPITAK
VLDAVIRAFLRQHEVLEHSIPDTMTFGDHTFRVLNLVIESPEGSVYLTPS
EAGILKKLLINRGHLCLRKNLLAEIKGNTKEIIARNVDVHIASLRKKLGP
YGSKIVTIRGVGYLFSDDDSIPLQNHDNTAHPNEE