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2024-04-28 11:38:00

Gene list

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COG category: Signal transduction mechanisms
Organism: Xanthomonas axonopodis pv. citri str. 306, 306

Number of genes found: 262

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Xanthomonas axonopodis pv. citri str. 306, 306
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XACb0032 conserved hypothetical proteinpXAC64 CDS31393 324 - 0.58642
XAC0062 conserved hypothetical proteinchromosome CDS75798 921 + 0.663409
XAC0070 ankyrin-like proteinchromosome CDS82247 1722 + 0.69338
XAC0135 two-component system sensor proteinchromosome CDS158735 1227 + 0.683782
XAC0136 two-component system regulatory proteinchromosome CDS159958 633 + 0.696682
XAC0181 conserved hypothetical proteinchromosome CDS223451 348 + 0.672414
XAC0193 conserved hypothetical proteinchromosome CDS238501 477 + 0.696017
XAC0225 two-component system sensor proteinchromosome CDS272967 1443 + 0.683299
XAC0258 conserved hypothetical proteinchromosome CDS308105 1059 + 0.657224
XAC0259 conserved hypothetical proteinchromosome CDS309167 2661 + 0.632845
XAC0350 conserved hypothetical proteinchromosome CDS417517 1260 + 0.642857
XAC0374 conserved hypothetical proteinchromosome CDS444461 861 + 0.643438
XAC0424 conserved hypothetical proteinchromosome CDS499340 1629 - 0.677716
XAC0494 two-component system sensor proteinchromosome CDS580031 2310 - 0.685281
XAC0495 two-component system regulatory proteinchromosome CDS582341 1755 - 0.68718
XAC0571 conserved hypothetical proteinchromosome CDS671532 432 - 0.680556
XAC0593 conserved hypothetical proteinchromosome CDS696440 1929 + 0.675998
XAC0610 histidine kinase-response regulator hybrid proteinchromosome CDS718872 2643 + 0.669315
XAC0614 GGDEF family proteinchromosome CDS728125 981 + 0.657492
XAC0644 response regulatorchromosome CDS758738 1071 + 0.660131
XAC0683 two-component system sensor proteinchromosome CDS808727 1860 + 0.630645
XAC0684 two-component system regulatory proteinchromosome CDS810583 441 + 0.639456
XAC0685 histidine kinase-response regulator hybrid proteinchromosome CDS811027 1503 + 0.65336
XAC0729 two-component system sensor proteinchromosome CDS869137 1515 - 0.685149
XAC0730 two-component system regulatory proteinchromosome CDS870648 720 - 0.655556
XAC0896 two-component system regulatory proteinchromosome CDS1058087 465 - 0.658065
XAC0898 two-component system regulatory proteinchromosome CDS1060455 708 - 0.686441
XAC1074 sensor histidine kinasechromosome CDS1229680 1125 - 0.659556
XAC1075 sensor histidine kinasechromosome CDS1230522 426 - 0.640845
XAC1091 protein phosphatasechromosome CDS1245381 705 - 0.662411
XAC1095 conserved hypothetical proteinchromosome CDS1248288 750 + 0.674667
XAC1124 conserved hypothetical proteinchromosome CDS1275660 441 + 0.632653
XAC1184 conserved hypothetical proteinchromosome CDS1349458 747 - 0.643909
XAC1185 conserved hypothetical proteinchromosome CDS1350353 639 + 0.652582
XAC1201 conserved hypothetical proteinchromosome CDS1370688 813 + 0.658057
XAC1207 transcriptional regulator araC/xylS familychromosome CDS1379465 681 + 0.612335
XAC1228 two-component system sensor proteinchromosome CDS1406493 1197 + 0.675856
XAC1229 two-component system regulatory proteinchromosome CDS1407686 645 + 0.654264
XAC1240 conserved hypothetical proteinchromosome CDS1417293 600 + 0.676667
XAC1272 two-component system regulatory proteinchromosome CDS1454557 1014 + 0.682446
XAC1273 two-component system sensor proteinchromosome CDS1455033 1407 + 0.653874
XAC1279 two-component system regulatory proteinchromosome CDS1464280 1131 - 0.635721
XAC1282 two-component system sensor proteinchromosome CDS1469906 1401 + 0.620271
XAC1283 two-component system sensor proteinchromosome CDS1466809 3207 - 0.651388
XAC1284 two-component system regulatory proteinchromosome CDS1471299 369 + 0.631436
XAC1320 regulatory proteinchromosome CDS1524679 897 + 0.713489
XAC1328 conserved hypothetical proteinchromosome CDS1533475 723 - 0.6639
XAC1345 sensor histidine kinasechromosome CDS1551713 1710 - 0.668421
XAC1355 conserved hypothetical proteinchromosome CDS1563153 267 + 0.636704
XAC1364 conserved hypothetical proteinchromosome CDS1572557 456 + 0.635965
XAC1420 conserved hypothetical proteinchromosome CDS1634710 1524 - 0.650919
XAC1486 conserved hypothetical proteinchromosome CDS1718512 975 - 0.653333
XAC1488 sensor histidine kinasechromosome CDS1720078 1701 - 0.657848
XAC1570 conserved hypothetical proteinchromosome CDS1813963 3030 + 0.666007
XAC1612 transcriptional regulatorchromosome CDS1858906 714 + 0.602241
XAC1645 conserved hypothetical proteinchromosome CDS1896648 810 + 0.688889
XAC1669 histidine kinase-response regulator hybrid proteinchromosome CDS1925794 2031 + 0.660758
XAC1670 response regulatorchromosome CDS1927940 375 - 0.602667
XAC1671 conserved hypothetical proteinchromosome CDS1928584 1518 + 0.613966
XAC1756 conserved hypothetical proteinchromosome CDS2014480 1398 - 0.624463
XAC1778 sensor kinasechromosome CDS2047115 1539 + 0.528915
XAC1795 conserved hypothetical proteinchromosome CDS2066756 1857 - 0.66559
XAC1905 conserved hypothetical proteinchromosome CDS2228801 309 - 0.618123
XAC1912 serine/threonine kinasechromosome CDS2237697 849 + 0.537102
XAC1938 GGDEF family proteinchromosome CDS2265531 2088 - 0.678161
XAC1939 GGDEF family proteinchromosome CDS2267890 2847 - 0.680365
XAC1940 GGDEF family proteinchromosome CDS2271195 2943 - 0.683656
XAC1968 response regulatorchromosome CDS2300074 384 - 0.583333
XAC1970 response regulatorchromosome CDS2302086 633 - 0.660348
XAC1991 histidine kinasechromosome CDS2321861 1227 + 0.615322
XAC1992 c-di-GMP phosphodiesterase Achromosome CDS2323230 1722 - 0.644019
XAC1993 conserved hypothetical proteinchromosome CDS2327043 2952 + 0.635501
XAC1994 HrpX related proteinchromosome CDS2324955 2133 - 0.66526
XAC2049 conserved hypothetical proteinchromosome CDS2393976 198 + 0.611111
XAC2054 two-component system sensor proteinchromosome CDS2399347 3384 - 0.649823
XAC2055 two-component system regulatory proteinchromosome CDS2402941 381 - 0.614173
XAC2090 low molecular weight phosphotyrosine protein phosphatasechromosome CDS2438930 465 + 0.668817
XAC2152 conserved hypothetical proteinchromosome CDS2521566 1812 + 0.622517
XAC2167 two-component system sensor proteinchromosome CDS2536698 3051 + 0.690921
XAC2168 two-component system regulatory proteinchromosome CDS2539741 642 + 0.67134
XAC2188 cell growth regulatory proteinchromosome CDS2561552 240 - 0.645833
XAC2192 two-component system sensor proteinchromosome CDS2564613 1050 + 0.703809
XAC2239 conserved hypothetical proteinchromosome CDS2622116 408 + 0.664216
XAC2314 conserved hypothetical proteinchromosome CDS2708925 270 - 0.692593
XAC2382 GGDEF family proteinchromosome CDS2775597 2118 - 0.659585
XAC2398 conserved hypothetical proteinchromosome CDS2793239 2070 + 0.645411
XAC2446 conserved hypothetical proteinchromosome CDS2847359 1041 + 0.67147
XAC2452 conserved hypothetical proteinchromosome CDS2856807 372 - 0.615591
XAC2462 ATP-binding proteinchromosome CDS2866868 987 + 0.631206
XAC2492 two-component system sensor proteinchromosome CDS2903998 4095 + 0.650305
XAC2493 two-component system regulatory proteinchromosome CDS2908126 987 + 0.665653
XAC2610 hypothetical proteinchromosome CDS3075806 804 - 0.480099
XAC2670 alginate biosynthesis proteinchromosome CDS3127891 1029 + 0.559767
XAC2711 phosphodiesterasechromosome CDS3169304 2199 - 0.656662
XAC2810 conserved hypothetical proteinchromosome CDS3295120 1071 - 0.666667
XAC2812 conserved hypothetical proteinchromosome CDS3297290 2367 - 0.64681
XAC2864 conserved hypothetical proteinchromosome CDS3360488 330 + 0.639394
XAC2897 response regulatorchromosome CDS3397896 1020 + 0.668627
XAC3007 conserved hypothetical proteinchromosome CDS3518386 774 - 0.652455
XAC3020 hypothetical proteinchromosome CDS3527283 348 + 0.635057
XAC3026 transcriptional regulatorchromosome CDS3533270 1605 - 0.641122
XAC3028 histidine kinase-response regulator hybrid proteinchromosome CDS3536735 3678 - 0.651985
XAC3029 histidine kinase-response regulator hybrid proteinchromosome CDS3540669 3570 - 0.62409
XAC3030 hypothetical proteinchromosome CDS3544949 399 - 0.66416
XAC3031 histidine kinase-response regulator hybrid proteinchromosome CDS3545455 3576 - 0.651286
XAC3096 conserved hypothetical proteinchromosome CDS3633409 477 - 0.672956
XAC3097 conserved hypothetical proteinchromosome CDS3633919 1188 - 0.704545
XAC3126 response regulatorchromosome CDS3679587 405 + 0.622222
XAC3272 conserved hypothetical proteinchromosome CDS3853575 924 + 0.566017
XAC3273 histidine kinase-response regulator hybrid proteinchromosome CDS3854671 1266 - 0.599526
XAC3335 sensor histidine kinasechromosome CDS3931798 1362 + 0.660793
XAC3362 TonB-like proteinchromosome CDS3958229 1299 - 0.660508
XAC3432 conserved hypothetical proteinchromosome CDS4040520 660 - 0.686364
XAC3443 response regulatorchromosome CDS4054139 1149 + 0.670148
XAC3460 conserved hypothetical proteinchromosome CDS4082872 2952 - 0.688008
XAC3473 sensor histidine kinasechromosome CDS4104169 2643 + 0.680288
XAC3480 transcriptional regulator luxR/uhpA familychromosome CDS4112580 639 - 0.663537
XAC3617 conserved hypothetical proteinchromosome CDS4291047 489 + 0.650307
XAC3672 hypothetical proteinchromosome CDS4349827 330 + 0.657576
XAC3673 histidine kinasechromosome CDS4350149 1737 + 0.642487
XAC3683 sensor histidine kinasechromosome CDS4360048 1896 - 0.6577
XAC3720 conserved hypothetical proteinchromosome CDS4396134 1032 - 0.669574
XAC3733 transcriptional regulator NtrC familychromosome CDS4407382 1314 - 0.643836
XAC3754 conserved hypothetical proteinchromosome CDS4428200 1341 + 0.666667
XAC3768 chemotaxis proteinchromosome CDS4443741 2133 + 0.636193
XAC3826 response regulator proteinchromosome CDS4499809 795 - 0.651572
XAC3927 conserved hypothetical proteinchromosome CDS4618988 555 + 0.643243
XAC3958 conserved hypothetical proteinchromosome CDS4653547 1563 + 0.664108
XAC3993 two-component system regulatory proteinchromosome CDS4684547 603 - 0.661692
XAC3994 two-component system sensor proteinchromosome CDS4685234 1278 - 0.683099
XAC4083 conserved hypothetical proteinchromosome CDS4786227 336 - 0.681548
XAC4116 serine/threonine kinasechromosome CDS4829001 3708 - 0.702265
XAC4122 conserved hypothetical proteinchromosome CDS4840701 1317 - 0.675778
XAC4130 transmembrane sensorchromosome CDS4850802 1071 + 0.695612
XAC4149 conserved hypothetical proteinchromosome CDS4876433 447 - 0.639821
XAC4193 two-component system sensor proteinchromosome CDS4931253 3453 - 0.672169
XAC4283 sensor histidine kinasechromosome CDS5059882 1257 + 0.644391
XAC4358 conserved hypothetical proteinchromosome CDS5151929 1728 - 0.685764
XAC4359 sugar diacide regulatorchromosome CDS5153769 1212 - 0.69802
aceK isocitrate dehydrogenase kinasechromosome CDS4507087 1740 - 0.627586
algR two-component system regulatory proteinchromosome CDS736179 738 + 0.669377
algR transcriptional regulator proteinchromosome CDS4395361 777 - 0.67825
algZ two-component system sensor proteinchromosome CDS735096 1053 + 0.695157
apaH diadenosine tetraphosphatasechromosome CDS1022905 945 - 0.665608
aphB phytochrome-like proteinchromosome CDS5072853 1905 - 0.669291
baeR two-component system regulatory proteinchromosome CDS3286708 690 + 0.644928
baeS two-component system sensor proteinchromosome CDS3287394 1194 + 0.677554
cheA chemotaxis histidine protein kinasechromosome CDS3360836 2010 + 0.649254
cheA chemotaxis proteinchromosome CDS2226399 2007 - 0.663179
cheB protein-glutamate methylesterasechromosome CDS3367781 1059 + 0.679887
cheB glutamate methylesterasechromosome CDS2195047 1077 - 0.660167
cheB protein-glutamate methylesterasechromosome CDS1465407 585 - 0.68718
cheD chemotaxis proteinchromosome CDS2196120 597 - 0.631491
cheR response regulator for chemotaxischromosome CDS3366888 828 + 0.621981
cheR methyltransferasechromosome CDS4403083 2853 - 0.63477
cheR chemotaxis protein methyltransferasechromosome CDS2196719 861 - 0.632985
cheR chemotaxis proteinchromosome CDS1465988 825 - 0.624242
cheV chemotaxis proteinchromosome CDS2319009 945 - 0.651852
cheW chemotaxis proteinchromosome CDS2848442 510 - 0.647059
cheW chemotaxis proteinchromosome CDS3365079 516 + 0.653101
cheY single-domain response regulatorchromosome CDS3856021 369 + 0.566396
cheY chemotaxis response regulatorchromosome CDS2228439 366 - 0.625683
cheY chemotaxis proteinchromosome CDS2257751 381 - 0.622047
cheZ chemotaxis related proteinchromosome CDS2257125 627 - 0.660287
clp CAP-like proteinchromosome CDS573528 693 - 0.633478
colR two-component system regulatory proteinchromosome CDS3831602 678 - 0.638643
colR two-component system regulatory proteinchromosome CDS1401059 717 + 0.656904
colR two-component system regulatory proteinchromosome CDS995272 747 + 0.637216
colS two-component system sensor proteinchromosome CDS3830275 1158 - 0.651986
colS two-component system sensor proteinchromosome CDS996163 1272 + 0.660377
colS two-component system sensor proteinchromosome CDS1401768 1290 + 0.65969
creB two-component system regulatory proteinchromosome CDS3347644 693 - 0.694084
creC two-component system sensor proteinchromosome CDS3346147 1449 - 0.668047
csrA carbon storage regulatorchromosome CDS2004615 213 + 0.586854
cstA carbon starvation protein Achromosome CDS3380001 2073 + 0.647853
cvgSY histidine kinase-response regulator hybrid proteinchromosome CDS3869894 1257 - 0.613365
cvgSY histidine kinase-response regulator hybrid proteinchromosome CDS1456429 1956 + 0.653374
cvgSY histidine kinase-response regulator hybrid proteinchromosome CDS1930088 2073 + 0.657501
dksA DnaK supressorchromosome CDS2752887 489 - 0.623722
exsF regulatory proteinchromosome CDS4406769 381 + 0.632546
exsF two-component system regulatory proteinchromosome CDS3687521 360 - 0.616667
exsG two-component system sensor proteinchromosome CDS3687877 1008 - 0.616071
fixL sensor histidine kinasechromosome CDS3014193 1623 - 0.624153
flbD transcriptional regulatorchromosome CDS1004256 1128 - 0.66578
fleQ transcriptional regulatorchromosome CDS2298597 1485 - 0.663973
fnr fumarate and nitrate reduction regulatory proteinchromosome CDS2120702 762 - 0.69685
gacA transcriptional regulator luxR/uhpA familychromosome CDS2463557 648 + 0.601852
glnE glutamine synthetase adenylyltransferasechromosome CDS649023 2826 + 0.68719
hrpG HrpG proteinchromosome CDS1444841 792 - 0.611111
icfG IcfG proteinchromosome CDS671960 2082 - 0.681076
kdpD two-component system sensor proteinchromosome CDS901254 2661 + 0.68696
kdpE two-component system regulatory proteinchromosome CDS903904 717 + 0.662483
lexA LexA repressorchromosome CDS1362326 606 + 0.674918
lexA LexA repressorchromosome CDS1999076 642 + 0.646417
lytS two-component system sensor proteinchromosome CDS2497050 1011 - 0.636993
lytT two-component system regulatory proteinchromosome CDS2496349 693 - 0.627706
mcp chemotaxis proteinchromosome CDS2331327 1191 - 0.646516
mcp chemotaxis proteinchromosome CDS3363068 2001 + 0.654673
mcp chemotaxis proteinchromosome CDS2848963 1659 - 0.655817
mcp1 chemotaxis proteinchromosome CDS3786751 1911 + 0.6719
mcpA chemotaxis proteinchromosome CDS2006029 2055 + 0.646229
nodV nodulation proteinchromosome CDS2508342 1374 + 0.679039
nodW nodulation proteinchromosome CDS2509712 612 + 0.640523
ntrB two-component system sensor proteinchromosome CDS254630 1056 + 0.698864
ntrC two-component system regulatory proteinchromosome CDS255678 1428 + 0.687675
ntrC two-component system regulatory proteinchromosome CDS274394 1347 + 0.669636
pdeA c-di-GMP phosphodiesterase Achromosome CDS2192683 2265 - 0.648565
pemI XACa0028 plasmid stable inheritance protein IpXAC33 CDS18557 258 - 0.616279
pemK XACa0027 plasmid stable inheritance protein KpXAC33 CDS18225 336 - 0.616071
phS histidine kinase-response regulator hybrid proteinchromosome CDS714320 1008 - 0.666667
phoB two-component system regulatory proteinchromosome CDS1203405 690 - 0.652174
phoP two-component system regulatory proteinchromosome CDS4714904 684 - 0.609649
phoQ two-component system sensor proteinchromosome CDS4713459 1416 - 0.641243
phoR two-component system sensor proteinchromosome CDS1202004 1344 - 0.675595
pilG pilus proteinchromosome CDS3645440 402 - 0.564677
pilH regulatory protein pilH familychromosome CDS1313897 387 + 0.620155
pilH PilH proteinchromosome CDS3645060 363 - 0.592287
pilI pilus biogenesis proteinchromosome CDS3644530 534 - 0.651685
pilJ pilus biogenesis proteinchromosome CDS3642454 2037 - 0.657339
pilL PilL proteinchromosome CDS3635114 7269 - 0.676847
pilR two-component system regulatory proteinchromosome CDS3814656 1455 + 0.654296
pilS two-component system sensor proteinchromosome CDS3812778 1614 + 0.674102
pknB serine/threonine kinasechromosome CDS4846892 2298 - 0.692776
prpR propionate catabolism regulatory proteinchromosome CDS1285128 1599 - 0.667917
ptc1 phosphoprotein phosphatasechromosome CDS4832713 717 - 0.680614
ptsK HPr kinasechromosome CDS3476557 951 + 0.652997
ptsN nitrogen regulatory IIA proteinchromosome CDS3476102 459 + 0.699346
regR two-component system regulatory proteinchromosome CDS2070242 567 - 0.656085
regS two-component system sensor proteinchromosome CDS2070805 1230 - 0.682927
relA ATP:GTP 3'-pyrophosphotranferasechromosome CDS3659326 2184 - 0.674908
rpfC RpfC proteinchromosome CDS2179302 2178 + 0.666667
rpfD regulatory proteinchromosome CDS2174014 915 + 0.681967
rpfG response regulatorchromosome CDS2178162 1137 + 0.66051
rrpX transcriptional regulatorchromosome CDS2890564 1245 + 0.634538
rsbR positive regulator of sigma-Bchromosome CDS1452953 858 + 0.62704
rsbS negative regulator of sigma-Bchromosome CDS1453812 363 + 0.633609
rsbT sigma-B negative effectorchromosome CDS1454171 396 + 0.659091
smeR two-component system regulatory proteinchromosome CDS386341 684 - 0.697368
smeS two-component system sensor proteinchromosome CDS387021 1380 - 0.698551
spoIIAA anti-sigma F factor antagonistchromosome CDS671116 420 - 0.661905
spoT pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS3999812 2172 - 0.646869
stkXac1 serine/threonine kinasechromosome CDS1332144 1050 - 0.611429
styS histidine kinase-response regulator hybrid proteinchromosome CDS4321065 2700 + 0.649259
tar chemotaxis proteinchromosome CDS4067907 1548 - 0.682817
tcp chemotaxis transducerchromosome CDS3853021 459 - 0.62963
tcsR two-component system regulatory proteinchromosome CDS4916239 669 + 0.651719
tctD two-component system regulatory proteinchromosome CDS4115955 702 - 0.648148
tctE two-component system sensor proteinchromosome CDS4114577 1386 - 0.681097
torS two-component system sensor proteinchromosome CDS1058548 1911 - 0.653061
tspO tryptophan-rich sensory proteinchromosome CDS2113080 501 + 0.62475
tsr chemotaxis proteinchromosome CDS2200667 1965 - 0.652926
tsr chemotaxis proteinchromosome CDS2203249 2064 - 0.656008
tsr chemotaxis proteinchromosome CDS2211536 2085 - 0.644604
tsr chemotaxis proteinchromosome CDS2214015 2304 - 0.657552
tsr chemotaxis proteinchromosome CDS722047 2013 - 0.638351
tsr chemotaxis proteinchromosome CDS2223874 2112 - 0.64678
tsr chemotaxis proteinchromosome CDS1920416 2043 - 0.647088
tsr chemotaxis proteinchromosome CDS2206130 2070 - 0.643478
typA GTP-binding elongation factor proteinchromosome CDS1158215 1830 - 0.631148
vieA response regulatorchromosome CDS3365621 1284 + 0.676791
ygiX two-component system regulatory proteinchromosome CDS4668604 666 + 0.638138
ygiY two-component system sensor proteinchromosome CDS4669041 1410 + 0.648227